Rmu_sc0006243.1_g000009

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006243.1
OG0000057
Physical Location & Seq
Reverse (-)
36519 .. 38420
1902 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006243.1_g000009.1.cds

Sequence Viewer

Length: 1686 bp
atgtcaactgaacgggaagagaatcacccgaccattactgagggtcagagtgtcaatactaatcaggccagcgagcctgttatccccaccactgtcaccactacagtggagagtggagaaagagaggctttcgttccgaagcctattccagaaggagcaacctccgaggtaaggttcgcgatcatcatggagaatattgaaaatcatcgcaagaagatagccgctgattttgaaagggaaaccgcgaagacagatcagctcatacgcgaactagatcagcgcattaccctacatgcagaggatactagacaacagatcgcacattcagagaatgcagtacgggctcatgccgcaggtatcgctagcgagcagaatcagtgtcagagagaaatcatggaggctatcacgaaccaaagtaagcagaccgcgtcagatatggcaggtcttcgcaaggatggtactaacctcgcaacagaggtagccatgcaaagagctgaatggaaccaagagagagaagtgttgaacaaggctttaggggatcctagcgctatccttggttctcttggccagccatctggttcgggcaagtacgtgtcgccaaatcagcgggagaggactagcagcaacactgcttctccctccgctactgttgctactacaccactgaagaataaagagcaagctttggttatcggcggcagtaaggtaaagactacctcgtcaagcggacagaccactaaacagaagcatcaagcctcgaaagttgcgggaactacatccaactctgctacgttcattcagtactacagcgacagtgcagagaatgtgtaccaggaactgccaggaagttattacgggattgaccactccggcaacccgattaagatcacaaccttgtcaaaggagacgcctatgccggcagtgactcttcagcaacaggctacaacccgcgttgtacatgtaggagatggtttggaggctgtaaaccaagcaatacctttgcaggctcctcgccagactgtggcgacaccaccccctcctccgagtccagaatatgtaagacgtgatgaggggaagacaccgaggatgcggcaacccatttggccaggtttagggtacaatgtggccaataccagaatgacgatatcctcaaatgcagaatctttgtctgaggtagacttggcttctctcacccagatggctcaacagcctacagaatccgctgtggcctatcttcagcgatttcaaattcagaaagccaagcttaacgtcatcctgcctgagaaagagttagtcaagctggcggtcaagggtttggagcctcgccaacgaaagaagcaacatggcagcatgatccagtcaatgggagaactcatcacagaagtgggtagcttcgaacatctcctcagagagatagacacaaggaagaatgcatccagagggacatacgtaccagggaagcatcgtaccgtagtggccctgagctaccagccggctacctatgacccttactaccatcacaacaatgaagaagtggtccaggacgacgacggggaggaggagaatgatgtcgctgcctacgagttaaccgggagaaagaatccggccttgaagcaactgaaaattttcaaggaacctgtcaagctcaaatcggtgaccttcaccaaacctgaggtcgcgacatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

561

Amino Acids

61.7

Weight (kDa)

6.4

Isoelectric Point (pI)

39.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 718
Acc36I ACCTGC 2 cut(s) 344, 431
AccB7I CCANNNNNTGG 2 cut(s) 1021, 1363
AccI GTMKAC 1 cut(s) 1176
AccII CGCG 6 cut(s) 179, 245, 267, 428, 951, 1679
AclWI GGATC 3 cut(s) 533, 546, 1348
AcoI YGGCCR 3 cut(s) 565, 1103, 1125
AcsI RAATTY 2 cut(s) 1248, 1623
AcuI CTGAAG 3 cut(s) 686, 914, 1220
AcyI GRCGYC 1 cut(s) 908
AfaI GTAC 9 cut(s) 339, 460, 590, 803, 830, 957, 1118, 1452, 1468
AfeI AGCGCT 1 cut(s) 547
AfiI CCNNNNNNNGG 4 cut(s) 171, 1021, 1112, 1363
AflIII ACRYGT 2 cut(s) 591, 958
AgsI TTSAA 6 cut(s) 200, 233, 523, 1247, 1612, 1630
AjiI CACGTC 1 cut(s) 1064
AjnI CCWGG 5 cut(s) 831, 841, 1105, 1453, 1539
AleI CACNNNNGTG 2 cut(s) 104, 1382
AluBI AGCT 8 cut(s) 259, 494, 683, 1264, 1300, 1392, 1485, 1645
AluI AGCT 8 cut(s) 259, 494, 683, 1264, 1300, 1392, 1485, 1645
Alw26I GTCTC 1 cut(s) 899
AlwI GGATC 3 cut(s) 533, 546, 1348
AlwNI CAGNNNCTG 1 cut(s) 838
Aor51HI AGCGCT 1 cut(s) 547
AoxI GGCC 7 cut(s) 66, 565, 1103, 1125, 1227, 1476, 1605
ApeKI GCWGC 3 cut(s) 621, 1347, 1574
ApoI RAATTY 2 cut(s) 1248, 1623
ArsI GACNNNNNNTTYG 1 cut(s) 1659
Asp700I GAANNNNTTC 1 cut(s) 1625
AspLEI GCGC 2 cut(s) 282, 548
AspS9I GGNCC 2 cut(s) 1477, 1537
AsuC2I CCSGG 1 cut(s) 1591
AsuHPI GGTGA 5 cut(s) 17, 88, 1183, 1654, 1666
AsuII TTCGAA 1 cut(s) 1395
AsuNHI GCTAGC 1 cut(s) 362
AvaII GGWCC 1 cut(s) 1537
AxyI CCTNAGG 1 cut(s) 1671
BaeI ACNNNNGTAYC 2 cut(s) 1434, 1467
BalI TGGCCA 3 cut(s) 567, 1105, 1127
BamHI GGATCC 1 cut(s) 538
BanII GRGCYC 1 cut(s) 346
BbsI GAAGAC 3 cut(s) 254, 437, 1082
BbvI GCAGC 3 cut(s) 633, 1359, 1561
BccI CCATC 5 cut(s) 449, 580, 962, 1192, 1524
BcgI CGANNNNNNTGC 2 cut(s) 992, 1026
BciT130I CCWGG 5 cut(s) 833, 843, 1107, 1455, 1541
BciVI GTATCC 1 cut(s) 295
BcnI CCSGG 1 cut(s) 1591
BcoDI GTCTC 1 cut(s) 899
BfaI CTAG 5 cut(s) 272, 306, 363, 543, 618
BfmI CTRYAG 3 cut(s) 102, 805, 1212
BfoI RGCGCY 1 cut(s) 549
BfuAI ACCTGC 2 cut(s) 344, 431
BfuI GTATCC 1 cut(s) 295
BisI GCNGC 7 cut(s) 222, 351, 622, 697, 1091, 1348, 1575
BlsI GCNGC 7 cut(s) 223, 352, 623, 698, 1092, 1349, 1576
BmcAI AGTACT 1 cut(s) 803
Bme1390I CCNGG 6 cut(s) 833, 843, 1107, 1455, 1541, 1591
Bme18I GGWCC 1 cut(s) 1537
BmgBI CACGTC 1 cut(s) 1064
BmgT120I GGNCC 2 cut(s) 1477, 1537
BmiI GGNNCC 5 cut(s) 503, 540, 1008, 1320, 1635
BmrFI CCNGG 6 cut(s) 833, 843, 1107, 1455, 1541, 1591
BmsI GCATC 4 cut(s) 757, 1077, 1442, 1471
BmtI GCTAGC 1 cut(s) 366
BpiI GAAGAC 3 cut(s) 254, 437, 1082
Bpu10I CCTNAGC 1 cut(s) 1481
Bpu14I TTCGAA 1 cut(s) 1395
BpuMI CCSGG 1 cut(s) 1591
BsaAI YACGTR 2 cut(s) 592, 1450
BsaBI GATNNNNATC 1 cut(s) 884
BsaHI GRCGYC 1 cut(s) 908
BsaJI CCNNGG 4 cut(s) 165, 553, 1082, 1454
BsaXI ACNNNNNCTCC 2 cut(s) 619, 649
Bsc4I CCNNNNNNNGG 4 cut(s) 171, 1021, 1112, 1363
Bse118I RCCGGY 2 cut(s) 916, 1492
Bse1I ACTGG 1 cut(s) 1357
Bse21I CCTNAGG 1 cut(s) 1671
Bse8I GATNNNNATC 1 cut(s) 884
BseBI CCWGG 5 cut(s) 833, 843, 1107, 1455, 1541
BseDI CCNNGG 4 cut(s) 165, 553, 1082, 1454
BseGI GGATG 5 cut(s) 460, 776, 1092, 1272, 1433
BseJI GATNNNNATC 1 cut(s) 884
BseLI CCNNNNNNNGG 4 cut(s) 171, 1021, 1112, 1363
BseMII CTCAG 6 cut(s) 30, 1161, 1272, 1420, 1472, 1662
BseNI ACTGG 1 cut(s) 1357
BseRI GAGGAG 5 cut(s) 999, 1029, 1394, 1571, 1574
BseXI GCAGC 3 cut(s) 633, 1359, 1561
BsgI GTGCAG 1 cut(s) 837
Bsh1236I CGCG 6 cut(s) 179, 245, 267, 428, 951, 1679
BshFI GGCC 7 cut(s) 68, 567, 1105, 1127, 1229, 1478, 1607
BsiSI CCGG 5 cut(s) 870, 917, 1493, 1590, 1604
BslFI GGGAC 1 cut(s) 1456
BslI CCNNNNNNNGG 4 cut(s) 171, 1021, 1112, 1363
BsmAI GTCTC 1 cut(s) 899
BsmBI CGTCTC 1 cut(s) 899
BsmFI GGGAC 1 cut(s) 1456
BsmI GAATGC 2 cut(s) 337, 1435
BsnI GGCC 7 cut(s) 68, 567, 1105, 1127, 1229, 1478, 1607
Bsp119I TTCGAA 1 cut(s) 1395
Bsp1286I GDGCHC 1 cut(s) 346
Bsp1407I TGTACA 1 cut(s) 955
Bsp143I GATC 7 cut(s) 180, 253, 274, 315, 538, 885, 1353
Bsp68I TCGCGA 2 cut(s) 179, 1679
BspANI GGCC 7 cut(s) 68, 567, 1105, 1127, 1229, 1478, 1607
BspCNI CTCAG 6 cut(s) 31, 1162, 1273, 1419, 1473, 1663
BspFNI CGCG 6 cut(s) 179, 245, 267, 428, 951, 1679
BspLI GGNNCC 5 cut(s) 503, 540, 1008, 1320, 1635
BspMI ACCTGC 2 cut(s) 344, 431
BspOI GCTAGC 1 cut(s) 366
BspPI GGATC 3 cut(s) 533, 546, 1348
BspT104I TTCGAA 1 cut(s) 1395
BsrFI RCCGGY 2 cut(s) 916, 1492
BsrGI TGTACA 1 cut(s) 955
BsrI ACTGG 1 cut(s) 1357
BssAI RCCGGY 2 cut(s) 916, 1492
BssECI CCNNGG 4 cut(s) 165, 553, 1082, 1454
BssMI GATC 7 cut(s) 180, 253, 274, 315, 538, 885, 1353
BssNI GRCGYC 1 cut(s) 908
BssT1I CCWWGG 1 cut(s) 553
Bst2UI CCWGG 5 cut(s) 833, 843, 1107, 1455, 1541
Bst4CI ACNGT 6 cut(s) 94, 106, 649, 815, 1021, 1471
Bst6I CTCTTC 2 cut(s) 12, 933
BstACI GRCGYC 1 cut(s) 908
BstAUI TGTACA 1 cut(s) 955
BstBAI YACGTR 2 cut(s) 592, 1450
BstBI TTCGAA 1 cut(s) 1395
BstDEI CTNAG 6 cut(s) 39, 1170, 1281, 1406, 1481, 1671
BstEII GGTNACC 1 cut(s) 1654
BstF5I GGATG 5 cut(s) 460, 776, 1092, 1272, 1433
BstFNI CGCG 6 cut(s) 179, 245, 267, 428, 951, 1679
BstH2I RGCGCY 1 cut(s) 549
BstHHI GCGC 2 cut(s) 282, 548
BstKTI GATC 7 cut(s) 183, 256, 277, 318, 541, 888, 1356
BstMAI GTCTC 1 cut(s) 899
BstMBI GATC 7 cut(s) 180, 253, 274, 315, 538, 885, 1353
BstMWI GCNNNNNNNGC 5 cut(s) 341, 350, 359, 604, 650
BstNI CCWGG 5 cut(s) 833, 843, 1107, 1455, 1541
BstNSI RCATGY 2 cut(s) 296, 962
BstPI GGTNACC 1 cut(s) 1654
BstSCI CCNGG 6 cut(s) 831, 841, 1105, 1453, 1539, 1589
BstSFI CTRYAG 3 cut(s) 102, 805, 1212
BstSNI TACGTA 1 cut(s) 1450
BstUI CGCG 6 cut(s) 179, 245, 267, 428, 951, 1679
BstV1I GCAGC 3 cut(s) 633, 1359, 1561
BstV2I GAAGAC 3 cut(s) 254, 437, 1082
BstX2I RGATCY 1 cut(s) 538
BstXI CCANNNNNNTGG 2 cut(s) 106, 575
BstYI RGATCY 1 cut(s) 538
Bsu36I CCTNAGG 1 cut(s) 1671
BsuI GTATCC 1 cut(s) 295
BsuRI GGCC 7 cut(s) 68, 567, 1105, 1127, 1229, 1478, 1607
BtgZI GCGATG 1 cut(s) 191
BtrI CACGTC 1 cut(s) 1064
BtsCI GGATG 5 cut(s) 460, 776, 1092, 1272, 1433
BtsI GCAGTG 2 cut(s) 627, 927
BtsIMutI CAGTG 7 cut(s) 90, 111, 383, 627, 662, 820, 927
BtuMI TCGCGA 2 cut(s) 179, 1679
BveI ACCTGC 2 cut(s) 344, 431
CaiI CAGNNNCTG 1 cut(s) 838
CfoI GCGC 2 cut(s) 282, 548
Cfr10I RCCGGY 2 cut(s) 916, 1492
Cfr13I GGNCC 2 cut(s) 1477, 1537
CseI GACGC 2 cut(s) 417, 916
Csp6I GTAC 9 cut(s) 338, 459, 589, 802, 829, 956, 1117, 1451, 1467
CviAII CATG 8 cut(s) 187, 293, 347, 394, 484, 959, 1343, 1351
CviQI GTAC 9 cut(s) 338, 459, 589, 802, 829, 956, 1117, 1451, 1467
DdeI CTNAG 6 cut(s) 39, 1170, 1281, 1406, 1481, 1671
DpnI GATC 7 cut(s) 182, 255, 276, 317, 540, 887, 1355
DpnII GATC 7 cut(s) 180, 253, 274, 315, 538, 885, 1353
DrdI GACNNNNNNGTC 1 cut(s) 718
DseDI GACNNNNNNGTC 1 cut(s) 718
EaeI YGGCCR 3 cut(s) 565, 1103, 1125
Eam1104I CTCTTC 2 cut(s) 12, 933
EarI CTCTTC 2 cut(s) 12, 933
Eco105I TACGTA 1 cut(s) 1450
Eco130I CCWWGG 1 cut(s) 553
Eco24I GRGCYC 1 cut(s) 346
Eco32I GATATC 1 cut(s) 1146
Eco47I GGWCC 1 cut(s) 1537
Eco47III AGCGCT 1 cut(s) 547
Eco57I CTGAAG 3 cut(s) 686, 914, 1220
Eco81I CCTNAGG 1 cut(s) 1671
Eco91I GGTNACC 1 cut(s) 1654
EcoO65I GGTNACC 1 cut(s) 1654
EcoRII CCWGG 5 cut(s) 831, 841, 1105, 1453, 1539
EcoRV GATATC 1 cut(s) 1146
EcoT14I CCWWGG 1 cut(s) 553
EcoT22I ATGCAT 1 cut(s) 1435
EcoT38I GRGCYC 1 cut(s) 346
ErhI CCWWGG 1 cut(s) 553
Esp3I CGTCTC 1 cut(s) 899
FaeI CATG 8 cut(s) 190, 296, 350, 397, 487, 962, 1346, 1354
FalI AAGNNNNNCTT 4 cut(s) 112, 144, 1248, 1280
FaqI GGGAC 1 cut(s) 1456
FatI CATG 8 cut(s) 186, 292, 346, 393, 483, 958, 1342, 1350
FauI CCCGC 3 cut(s) 600, 760, 956
FblI GTMKAC 1 cut(s) 1176
Fnu4HI GCNGC 7 cut(s) 222, 351, 622, 697, 1091, 1348, 1575
FokI GGATG 5 cut(s) 467, 763, 1099, 1259, 1420
FriOI GRGCYC 1 cut(s) 346
Fsp4HI GCNGC 7 cut(s) 222, 351, 622, 697, 1091, 1348, 1575
FspBI CTAG 5 cut(s) 272, 306, 363, 543, 618
GlaI GCGC 2 cut(s) 281, 547
GluI GCNGC 7 cut(s) 222, 351, 622, 697, 1091, 1348, 1575
HaeII RGCGCY 1 cut(s) 549
HaeIII GGCC 7 cut(s) 68, 567, 1105, 1127, 1229, 1478, 1607
HapII CCGG 5 cut(s) 870, 917, 1493, 1590, 1604
HgaI GACGC 2 cut(s) 417, 916
HhaI GCGC 2 cut(s) 282, 548
Hin1I GRCGYC 1 cut(s) 908
Hin1II CATG 8 cut(s) 190, 296, 350, 397, 487, 962, 1346, 1354
Hin6I GCGC 2 cut(s) 280, 546
HinP1I GCGC 2 cut(s) 280, 546
HincII GTYRAC 2 cut(s) 6, 1587
HindII GTYRAC 2 cut(s) 6, 1587
HindIII AAGCTT 2 cut(s) 681, 1262
HinfI GANTC 7 cut(s) 22, 373, 925, 1045, 1160, 1217, 1600
HpaI GTTAAC 1 cut(s) 1587
HpaII CCGG 5 cut(s) 870, 917, 1493, 1590, 1604
HphI GGTGA 5 cut(s) 17, 88, 1183, 1654, 1666
Hpy166II GTNNAC 5 cut(s) 6, 829, 985, 1177, 1587
Hpy188III TCNNGA 6 cut(s) 149, 178, 406, 1049, 1437, 1678
Hpy8I GTNNAC 5 cut(s) 6, 829, 985, 1177, 1587
Hpy99I CGWCG 2 cut(s) 1550, 1553
HpyAV CCTTC 2 cut(s) 146, 1669
HpyCH4III ACNGT 6 cut(s) 94, 106, 649, 815, 1021, 1471
HpyCH4IV ACGT 5 cut(s) 591, 791, 1063, 1269, 1449
HpyCH4V TGCA 7 cut(s) 296, 335, 487, 818, 1003, 1157, 1433
HpyF10VI GCNNNNNNNGC 5 cut(s) 341, 350, 359, 604, 650
HpyF3I CTNAG 6 cut(s) 39, 1170, 1281, 1406, 1481, 1671
HpySE526I ACGT 5 cut(s) 591, 791, 1063, 1269, 1449
Hsp92I GRCGYC 1 cut(s) 908
Hsp92II CATG 8 cut(s) 190, 296, 350, 397, 487, 962, 1346, 1354
HspAI GCGC 2 cut(s) 280, 546
KroI GCCGGC 2 cut(s) 916, 1492
KroNI GCCGGC 2 cut(s) 918, 1494
KspAI GTTAAC 1 cut(s) 1587
Kzo9I GATC 7 cut(s) 180, 253, 274, 315, 538, 885, 1353
LmnI GCTCC 3 cut(s) 155, 1012, 1318
Lsp1109I GCAGC 3 cut(s) 633, 1359, 1561
LweI GCATC 4 cut(s) 757, 1077, 1442, 1471
MaeI CTAG 5 cut(s) 272, 306, 363, 543, 618
MaeII ACGT 5 cut(s) 591, 791, 1063, 1269, 1449
MaeIII GTNAC 3 cut(s) 94, 922, 1654
MalI GATC 7 cut(s) 182, 255, 276, 317, 540, 887, 1355
MboI GATC 7 cut(s) 180, 253, 274, 315, 538, 885, 1353
MflI RGATCY 1 cut(s) 538
MhlI GDGCHC 1 cut(s) 346
MlsI TGGCCA 3 cut(s) 567, 1105, 1127
MluCI AATT 2 cut(s) 1248, 1623
MluNI TGGCCA 3 cut(s) 567, 1105, 1127
MlyI GAGTC 2 cut(s) 919, 1054
MmeI TCCRAC 1 cut(s) 804
Mox20I TGGCCA 3 cut(s) 567, 1105, 1127
Mph1103I ATGCAT 1 cut(s) 1435
MroNI GCCGGC 2 cut(s) 916, 1492
MroXI GAANNNNTTC 1 cut(s) 1625
MscI TGGCCA 3 cut(s) 567, 1105, 1127
MseI TTAA 3 cut(s) 882, 1266, 1586
MslI CAYNNNNRTG 4 cut(s) 104, 1196, 1382, 1524
Msp20I TGGCCA 3 cut(s) 567, 1105, 1127
MspA1I CMGCKG 3 cut(s) 224, 607, 1223
MspI CCGG 5 cut(s) 870, 917, 1493, 1590, 1604
MspR9I CCNGG 6 cut(s) 833, 843, 1107, 1455, 1541, 1591
Mva1269I GAATGC 2 cut(s) 337, 1435
MvaI CCWGG 5 cut(s) 833, 843, 1107, 1455, 1541
MvnI CGCG 6 cut(s) 179, 245, 267, 428, 951, 1679
MwoI GCNNNNNNNGC 5 cut(s) 341, 350, 359, 604, 650
NaeI GCCGGC 2 cut(s) 918, 1494
NciI CCSGG 1 cut(s) 1591
NdeII GATC 7 cut(s) 180, 253, 274, 315, 538, 885, 1353
NgoMIV GCCGGC 2 cut(s) 916, 1492
NheI GCTAGC 1 cut(s) 362
NlaIII CATG 8 cut(s) 190, 296, 350, 397, 487, 962, 1346, 1354
NlaIV GGNNCC 5 cut(s) 503, 540, 1008, 1320, 1635
NmuCI GTSAC 3 cut(s) 94, 922, 1654
NruI TCGCGA 2 cut(s) 179, 1679
NsiI ATGCAT 1 cut(s) 1435
NspI RCATGY 2 cut(s) 296, 962
NspV TTCGAA 1 cut(s) 1395
OliI CACNNNNGTG 2 cut(s) 104, 1382
PciI ACATGT 1 cut(s) 958
PcsI WCGNNNNNNNCGW 1 cut(s) 1578
PctI GAATGC 2 cut(s) 337, 1435
PdiI GCCGGC 2 cut(s) 918, 1494
PdmI GAANNNNTTC 1 cut(s) 1625
PfeI GAWTC 5 cut(s) 22, 373, 1160, 1217, 1600
PflFI GACNNNGTC 1 cut(s) 427
PflMI CCANNNNNTGG 2 cut(s) 1021, 1363
PfoI TCCNGGA 1 cut(s) 1539
PkrI GCNGC 7 cut(s) 223, 352, 623, 698, 1092, 1349, 1576
PleI GAGTC 2 cut(s) 919, 1053
PpsI GAGTC 2 cut(s) 919, 1053
Ppu21I YACGTR 2 cut(s) 592, 1450
PscI ACATGT 1 cut(s) 958
Psp6I CCWGG 5 cut(s) 831, 841, 1105, 1453, 1539
PspEI GGTNACC 1 cut(s) 1654
PspGI CCWGG 5 cut(s) 831, 841, 1105, 1453, 1539
PspN4I GGNNCC 5 cut(s) 503, 540, 1008, 1320, 1635
PspPI GGNCC 2 cut(s) 1477, 1537
PstNI CAGNNNCTG 1 cut(s) 838
PsuI RGATCY 1 cut(s) 538
PsyI GACNNNGTC 1 cut(s) 427
RruI TCGCGA 2 cut(s) 179, 1679
RsaI GTAC 9 cut(s) 339, 460, 590, 803, 830, 957, 1118, 1452, 1468
RsaNI GTAC 9 cut(s) 338, 459, 589, 802, 829, 956, 1117, 1451, 1467
RseI CAYNNNNRTG 4 cut(s) 104, 1196, 1382, 1524
SaqAI TTAA 3 cut(s) 882, 1266, 1586
SatI GCNGC 7 cut(s) 222, 351, 622, 697, 1091, 1348, 1575
Sau3AI GATC 7 cut(s) 180, 253, 274, 315, 538, 885, 1353
Sau96I GGNCC 2 cut(s) 1477, 1537
ScaI AGTACT 1 cut(s) 803
SchI GAGTC 2 cut(s) 919, 1054
ScrFI CCNGG 6 cut(s) 833, 843, 1107, 1455, 1541, 1591
SduI GDGCHC 1 cut(s) 346
SfaNI GCATC 4 cut(s) 757, 1077, 1442, 1471
SfcI CTRYAG 3 cut(s) 102, 805, 1212
SfuI TTCGAA 1 cut(s) 1395
SinI GGWCC 1 cut(s) 1537
SmiMI CAYNNNNRTG 4 cut(s) 104, 1196, 1382, 1524
SnaBI TACGTA 1 cut(s) 1450
Sse9I AATT 2 cut(s) 1248, 1623
SspI AATATT 1 cut(s) 196
SspMI CTAG 5 cut(s) 272, 306, 363, 543, 618
StyD4I CCNGG 6 cut(s) 831, 841, 1105, 1453, 1539, 1589
StyI CCWWGG 1 cut(s) 553
TaaI ACNGT 6 cut(s) 94, 106, 649, 815, 1021, 1471
TaiI ACGT 5 cut(s) 594, 794, 1066, 1272, 1452
TaqI TCGA 2 cut(s) 758, 1395
TasI AATT 2 cut(s) 1248, 1623
TatI WGTACW 2 cut(s) 801, 955
TauI GCSGC 4 cut(s) 224, 353, 699, 1093
TfiI GAWTC 5 cut(s) 22, 373, 1160, 1217, 1600
Tru1I TTAA 3 cut(s) 882, 1266, 1586
Tru9I TTAA 3 cut(s) 882, 1266, 1586
TscAI CASTG 7 cut(s) 97, 111, 383, 634, 669, 820, 927
TseFI GTSAC 3 cut(s) 94, 922, 1654
TseI GCWGC 3 cut(s) 621, 1347, 1574
Tsp45I GTSAC 3 cut(s) 94, 922, 1654
TspDTI ATGAA 2 cut(s) 784, 1542
TspRI CASTG 7 cut(s) 97, 111, 383, 634, 669, 820, 927
Tth111I GACNNNGTC 1 cut(s) 427
Van91I CCANNNNNTGG 2 cut(s) 1021, 1363
VpaK11BI GGWCC 1 cut(s) 1537
XapI RAATTY 2 cut(s) 1248, 1623
XceI RCATGY 2 cut(s) 296, 962
XmiI GTMKAC 1 cut(s) 1176
XmnI GAANNNNTTC 1 cut(s) 1625
XspI CTAG 5 cut(s) 272, 306, 363, 543, 618
ZrmI AGTACT 1 cut(s) 803
Zsp2I ATGCAT 1 cut(s) 1435
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.