Rmu_sc0001227.1_g000008

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001227.1
Physical Location & Seq
Forward (+)
39520 .. 42479
2960 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001227.1_g000008.1.cds

Sequence Viewer

Length: 1467 bp
atgtatacgtcacggaataataataaggctgctcatgcagttgcagcttttgtagcccgagaggatgggtggatgttatggttagaggatgtgccttcttggctcatgtccatcaccgagtgtgagaggcctttaacccaagtagttggcaggtatatgagtagttctggtatcccaagaagcttagcaaaagtcctcaccacaaggcataaagaatcccgtgacgaggttggtgctctcctcgtccacaatcgctcaaaagaagtcaggtcaagggacacctccgacgaccaaactcgaatgcgtttctttgtgatcgctgccattaggaagtcaagctcaaacccttatcaaaaagtttacatcaactgccagaaacacaagacctccagttacagaccgcactcgcgtgcagattgtcgtggtctttctgaagaattggtaatccagagattttccctcaatccgccatcgaccgagatgacaaccgagcaaggaggaaatcgacagcctactactgaaggtgagaaagttctcgtcgcccagcctaatgaggctggcgatgcatctagcatcacccaggtagccgcgagcgtggttacaactattgactttgtgcctattcccgttccagagaatgcgatcatagaagagcatcttaatatccttcaacagaattgtgccgcataccatgagaagatggaaaaagcccttgcggaggaccgccgacggcttgatgagttcacgatctcggtcaagaggcttgagctaggggcacaacaaacacaagggcaattggatggcatgaaccaaaaaatacagaagaaccacgaagagctattggccgcaggcaaacacatcgccacagacgttgaggctataaaaaatgagggatccaatctcacaacccaagtcgccatgcagaaagctgacttagaccaggctaaagaggttctaaataaagctctgggagatcctaatgccatccttggttcgctaggccaacccacaaggtcatgcaagtacatactgtcaaatgctcaagaaaaagctagcggcagcagtacggccacatccgctccaactacaactgacacatcagtcagagacgtcgacccaacacaaaataatccatggagcagcgtatctttttttaatcaggcttcacaagcgccaccgttgatccggccagttgatgatagagtggttcaccaaccttatcttgatccaagatatgtaaggagagaggaggtagaagcaatgattagagccgcgaaccagaggcctaacatggaggaggcctaccaggagcccttcccaccgcatattacacagacaccttatccaagtggatataagaacattacgttctctactttctcgggagaggaagtcgaaagtgccacagcctatttggtcaggtttcgagtacagtgtggccagtaccagaacgatgacaatttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

488

Amino Acids

54.54

Weight (kDa)

6.06

Isoelectric Point (pI)

51.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1100
AatII GACGTC 1 cut(s) 1113
Acc36I ACCTGC 1 cut(s) 141
AccBSI CCGCTC 1 cut(s) 1079
AccI GTMKAC 2 cut(s) 5, 1113
AccII CGCG 3 cut(s) 409, 590, 1274
AclWI GGATC 5 cut(s) 888, 901, 968, 1177, 1220
AcoI YGGCCR 4 cut(s) 843, 1068, 1187, 1438
AcuI CTGAAG 2 cut(s) 453, 540
AcyI GRCGYC 1 cut(s) 1110
AdeI CACNNNGTG 1 cut(s) 120
AfaI GTAC 4 cut(s) 1025, 1066, 1431, 1445
AfiI CCNNNNNNNGG 2 cut(s) 226, 718
AgsI TTSAA 1 cut(s) 671
AjnI CCWGG 3 cut(s) 579, 939, 1305
AleI CACNNNNGTG 1 cut(s) 408
AluBI AGCT 8 cut(s) 47, 183, 339, 769, 838, 929, 965, 1052
AluI AGCT 8 cut(s) 47, 183, 339, 769, 838, 929, 965, 1052
Alw21I GWGCWC 1 cut(s) 238
Alw26I GTCTC 1 cut(s) 1101
AlwI GGATC 5 cut(s) 888, 901, 968, 1177, 1220
Ama87I CYCGRG 2 cut(s) 57, 1381
AoxI GGCC 8 cut(s) 128, 843, 1000, 1068, 1187, 1283, 1299, 1438
ApeKI GCWGC 5 cut(s) 29, 44, 320, 1059, 1140
AspLEI GCGC 1 cut(s) 1174
AspS9I GGNCC 1 cut(s) 721
AsuHPI GGTGA 5 cut(s) 106, 190, 536, 568, 1202
AsuNHI GCTAGC 1 cut(s) 1052
AvaI CYCGRG 2 cut(s) 57, 1381
AvaII GGWCC 1 cut(s) 721
BaeGI GKGCMC 1 cut(s) 778
BalI TGGCCA 1 cut(s) 1440
BamHI GGATCC 1 cut(s) 893
BanII GRGCYC 1 cut(s) 1314
Bbv12I GWGCWC 1 cut(s) 238
BbvI GCAGC 5 cut(s) 16, 56, 307, 1071, 1152
BccI CCATC 6 cut(s) 59, 119, 478, 694, 794, 992
BceAI ACGGC 2 cut(s) 746, 1083
BcgI CGANNNNNNTGC 4 cut(s) 215, 249, 841, 875
BciT130I CCWGG 3 cut(s) 581, 941, 1307
BciVI GTATCC 1 cut(s) 182
BcoDI GTCTC 1 cut(s) 1101
BfaI CTAG 4 cut(s) 570, 770, 998, 1053
BfoI RGCGCY 1 cut(s) 1175
BfuAI ACCTGC 1 cut(s) 141
BfuI GTATCC 1 cut(s) 182
BglI GCCNNNNNGGC 1 cut(s) 100
BlpI GCTNAGC 1 cut(s) 184
Bme1390I CCNGG 3 cut(s) 581, 941, 1307
Bme18I GGWCC 1 cut(s) 721
BmeT110I CYCGRG 2 cut(s) 57, 1381
BmgT120I GGNCC 1 cut(s) 721
BmiI GGNNCC 2 cut(s) 895, 1311
BmrFI CCNGG 3 cut(s) 581, 941, 1307
BmsI GCATC 4 cut(s) 553, 575, 582, 664
BmtI GCTAGC 1 cut(s) 1056
BpmI CTGGAG 1 cut(s) 373
Bpu1102I GCTNAGC 1 cut(s) 184
BpuEI CTTGAG 2 cut(s) 785, 1026
BsaHI GRCGYC 1 cut(s) 1110
BsaJI CCNNGG 3 cut(s) 579, 988, 1133
BsaXI ACNNNNNCTCC 6 cut(s) 371, 401, 1063, 1093, 1377, 1407
Bsc4I CCNNNNNNNGG 2 cut(s) 226, 718
Bse1I ACTGG 3 cut(s) 390, 1190, 1441
Bse3DI GCAATG 1 cut(s) 1266
BseBI CCWGG 3 cut(s) 581, 941, 1307
BseDI CCNNGG 3 cut(s) 579, 988, 1133
BseGI GGATG 6 cut(s) 70, 78, 94, 805, 984, 1073
BseLI CCNNNNNNNGG 2 cut(s) 226, 718
BseMI GCAATG 1 cut(s) 1266
BseNI ACTGG 3 cut(s) 390, 1190, 1441
BseRI GAGGAG 3 cut(s) 230, 1262, 1310
BseSI GKGCMC 1 cut(s) 778
BseXI GCAGC 5 cut(s) 16, 56, 307, 1071, 1152
BseYI CCCAGC 1 cut(s) 543
BsgI GTGCAG 1 cut(s) 432
Bsh1236I CGCG 3 cut(s) 409, 590, 1274
Bsh1285I CGRYCG 1 cut(s) 477
BshFI GGCC 8 cut(s) 130, 845, 1002, 1070, 1189, 1285, 1301, 1440
BsiEI CGRYCG 1 cut(s) 477
BsiHKAI GWGCWC 1 cut(s) 238
BsiHKCI CYCGRG 2 cut(s) 57, 1381
BsiSI CCGG 1 cut(s) 1186
BslFI GGGAC 1 cut(s) 290
BslI CCNNNNNNNGG 2 cut(s) 226, 718
BsmAI GTCTC 1 cut(s) 1101
BsmBI CGTCTC 1 cut(s) 1101
BsmFI GGGAC 1 cut(s) 290
BsmI GAATGC 2 cut(s) 306, 643
BsnI GGCC 8 cut(s) 130, 845, 1002, 1070, 1189, 1285, 1301, 1440
BsoBI CYCGRG 2 cut(s) 57, 1381
Bsp1286I GDGCHC 3 cut(s) 238, 778, 1314
Bsp143I GATC 7 cut(s) 315, 642, 747, 893, 973, 1182, 1225
Bsp1720I GCTNAGC 1 cut(s) 184
Bsp19I CCATGG 1 cut(s) 1133
BspANI GGCC 8 cut(s) 130, 845, 1002, 1070, 1189, 1285, 1301, 1440
BspFNI CGCG 3 cut(s) 409, 590, 1274
BspLI GGNNCC 2 cut(s) 895, 1311
BspMI ACCTGC 1 cut(s) 141
BspOI GCTAGC 1 cut(s) 1056
BspPI GGATC 5 cut(s) 888, 901, 968, 1177, 1220
BspQI GCTCTTC 2 cut(s) 645, 828
BsrBI CCGCTC 1 cut(s) 1079
BsrDI GCAATG 1 cut(s) 1266
BsrI ACTGG 3 cut(s) 390, 1190, 1441
BssECI CCNNGG 3 cut(s) 579, 988, 1133
BssMI GATC 7 cut(s) 315, 642, 747, 893, 973, 1182, 1225
BssNAI GTATAC 1 cut(s) 6
BssNI GRCGYC 1 cut(s) 1110
BssT1I CCWWGG 2 cut(s) 988, 1133
Bst1107I GTATAC 1 cut(s) 6
Bst2UI CCWGG 3 cut(s) 581, 941, 1307
Bst4CI ACNGT 3 cut(s) 1032, 1179, 1434
Bst6I CTCTTC 2 cut(s) 645, 828
BstACI GRCGYC 1 cut(s) 1110
BstC8I GCNNGC 5 cut(s) 411, 559, 592, 850, 1054
BstDEI CTNAG 2 cut(s) 184, 934
BstDSI CCRYGG 1 cut(s) 1133
BstENI CCTNNNNNAGG 1 cut(s) 716
BstF5I GGATG 6 cut(s) 70, 78, 94, 805, 984, 1073
BstFNI CGCG 3 cut(s) 409, 590, 1274
BstH2I RGCGCY 1 cut(s) 1175
BstHHI GCGC 1 cut(s) 1174
BstKTI GATC 7 cut(s) 318, 645, 750, 896, 976, 1185, 1228
BstMAI GTCTC 1 cut(s) 1101
BstMBI GATC 7 cut(s) 315, 642, 747, 893, 973, 1182, 1225
BstMCI CGRYCG 1 cut(s) 477
BstMWI GCNNNNNNNGC 7 cut(s) 35, 44, 53, 100, 563, 1076, 1169
BstNI CCWGG 3 cut(s) 581, 941, 1307
BstSCI CCNGG 3 cut(s) 579, 939, 1305
BstSLI GKGCMC 1 cut(s) 778
BstUI CGCG 3 cut(s) 409, 590, 1274
BstV1I GCAGC 5 cut(s) 16, 56, 307, 1071, 1152
BstX2I RGATCY 2 cut(s) 893, 973
BstXI CCANNNNNNTGG 1 cut(s) 146
BstYI RGATCY 2 cut(s) 893, 973
BstZ17I GTATAC 1 cut(s) 6
BsuI GTATCC 1 cut(s) 182
BsuRI GGCC 8 cut(s) 130, 845, 1002, 1070, 1189, 1285, 1301, 1440
BtgI CCRYGG 1 cut(s) 1133
BtgZI GCGATG 2 cut(s) 576, 844
BtsCI GGATG 6 cut(s) 70, 78, 94, 805, 984, 1073
BtsIMutI CAGTG 1 cut(s) 1439
BveI ACCTGC 1 cut(s) 141
Cac8I GCNNGC 5 cut(s) 411, 559, 592, 850, 1054
CfoI GCGC 1 cut(s) 1174
Cfr13I GGNCC 1 cut(s) 721
Csp6I GTAC 4 cut(s) 1024, 1065, 1430, 1444
CspCI CAANNNNNGTGG 2 cut(s) 853, 888
CviAII CATG 8 cut(s) 35, 106, 692, 805, 919, 1017, 1134, 1291
CviQI GTAC 4 cut(s) 1024, 1065, 1430, 1444
DdeI CTNAG 2 cut(s) 184, 934
DpnI GATC 7 cut(s) 317, 644, 749, 895, 975, 1184, 1227
DpnII GATC 7 cut(s) 315, 642, 747, 893, 973, 1182, 1225
DraIII CACNNNGTG 1 cut(s) 120
DrdI GACNNNNNNGTC 1 cut(s) 1100
DseDI GACNNNNNNGTC 1 cut(s) 1100
EaeI YGGCCR 4 cut(s) 843, 1068, 1187, 1438
Eam1104I CTCTTC 2 cut(s) 645, 828
EarI CTCTTC 2 cut(s) 645, 828
EciI GGCGGA 1 cut(s) 456
Eco130I CCWWGG 2 cut(s) 988, 1133
Eco147I AGGCCT 3 cut(s) 130, 1285, 1301
Eco24I GRGCYC 1 cut(s) 1314
Eco47I GGWCC 1 cut(s) 721
Eco57I CTGAAG 2 cut(s) 453, 540
Eco88I CYCGRG 2 cut(s) 57, 1381
EcoNI CCTNNNNNAGG 1 cut(s) 716
EcoRII CCWGG 3 cut(s) 579, 939, 1305
EcoT14I CCWWGG 2 cut(s) 988, 1133
EcoT22I ATGCAT 1 cut(s) 568
EcoT38I GRGCYC 1 cut(s) 1314
ErhI CCWWGG 2 cut(s) 988, 1133
Esp3I CGTCTC 1 cut(s) 1101
FaeI CATG 8 cut(s) 38, 109, 695, 808, 922, 1020, 1137, 1294
FalI AAGNNNNNCTT 2 cut(s) 642, 674
FaqI GGGAC 1 cut(s) 290
FatI CATG 8 cut(s) 34, 105, 691, 804, 918, 1016, 1133, 1290
FblI GTMKAC 2 cut(s) 5, 1113
FokI GGATG 6 cut(s) 77, 85, 101, 812, 971, 1060
FriOI GRGCYC 1 cut(s) 1314
FspBI CTAG 4 cut(s) 570, 770, 998, 1053
GlaI GCGC 1 cut(s) 1173
GsaI CCCAGC 1 cut(s) 547
GsuI CTGGAG 1 cut(s) 373
HaeII RGCGCY 1 cut(s) 1175
HaeIII GGCC 8 cut(s) 130, 845, 1002, 1070, 1189, 1285, 1301, 1440
HapII CCGG 1 cut(s) 1186
HhaI GCGC 1 cut(s) 1174
Hin1I GRCGYC 1 cut(s) 1110
Hin1II CATG 8 cut(s) 38, 109, 695, 808, 922, 1020, 1137, 1294
Hin6I GCGC 1 cut(s) 1172
HinP1I GCGC 1 cut(s) 1172
HincII GTYRAC 1 cut(s) 1114
HindII GTYRAC 1 cut(s) 1114
HindIII AAGCTT 1 cut(s) 181
HinfI GANTC 1 cut(s) 215
HpaII CCGG 1 cut(s) 1186
HphI GGTGA 5 cut(s) 106, 190, 536, 568, 1202
Hpy166II GTNNAC 6 cut(s) 6, 247, 361, 744, 1114, 1210
Hpy188I TCNGA 3 cut(s) 286, 433, 1106
Hpy188III TCNNGA 7 cut(s) 448, 632, 745, 757, 1043, 1223, 1383
Hpy8I GTNNAC 6 cut(s) 6, 247, 361, 744, 1114, 1210
Hpy99I CGWCG 4 cut(s) 290, 542, 732, 1115
HpyAV CCTTC 4 cut(s) 105, 515, 677, 1324
HpyCH4III ACNGT 3 cut(s) 1032, 1179, 1434
HpyCH4IV ACGT 4 cut(s) 8, 870, 1110, 1367
HpyCH4V TGCA 6 cut(s) 38, 44, 413, 566, 922, 1020
HpyF10VI GCNNNNNNNGC 7 cut(s) 35, 44, 53, 100, 563, 1076, 1169
HpyF3I CTNAG 2 cut(s) 184, 934
HpySE526I ACGT 4 cut(s) 8, 870, 1110, 1367
Hsp92I GRCGYC 1 cut(s) 1110
Hsp92II CATG 8 cut(s) 38, 109, 695, 808, 922, 1020, 1137, 1294
HspAI GCGC 1 cut(s) 1172
Kzo9I GATC 7 cut(s) 315, 642, 747, 893, 973, 1182, 1225
LguI GCTCTTC 2 cut(s) 645, 828
LmnI GCTCC 3 cut(s) 1084, 1137, 1309
Lsp1109I GCAGC 5 cut(s) 16, 56, 307, 1071, 1152
LweI GCATC 4 cut(s) 553, 575, 582, 664
MaeI CTAG 4 cut(s) 570, 770, 998, 1053
MaeII ACGT 4 cut(s) 8, 870, 1110, 1367
MaeIII GTNAC 4 cut(s) 9, 221, 392, 598
MalI GATC 7 cut(s) 317, 644, 749, 895, 975, 1184, 1227
MbiI CCGCTC 1 cut(s) 1079
MboI GATC 7 cut(s) 315, 642, 747, 893, 973, 1182, 1225
MboII GAAGA 5 cut(s) 446, 662, 709, 835, 845
MfeI CAATTG 1 cut(s) 794
MflI RGATCY 2 cut(s) 893, 973
MhlI GDGCHC 3 cut(s) 238, 778, 1314
MlsI TGGCCA 1 cut(s) 1440
MluCI AATT 4 cut(s) 437, 676, 794, 1459
MluNI TGGCCA 1 cut(s) 1440
MmeI TCCRAC 2 cut(s) 309, 1106
Mox20I TGGCCA 1 cut(s) 1440
Mph1103I ATGCAT 1 cut(s) 568
MscI TGGCCA 1 cut(s) 1440
MseI TTAA 3 cut(s) 134, 660, 1155
MslI CAYNNNNRTG 1 cut(s) 408
Msp20I TGGCCA 1 cut(s) 1440
MspI CCGG 1 cut(s) 1186
MspR9I CCNGG 3 cut(s) 581, 941, 1307
MunI CAATTG 1 cut(s) 794
Mva1269I GAATGC 2 cut(s) 306, 643
MvaI CCWGG 3 cut(s) 581, 941, 1307
MvnI CGCG 3 cut(s) 409, 590, 1274
MwoI GCNNNNNNNGC 7 cut(s) 35, 44, 53, 100, 563, 1076, 1169
NcoI CCATGG 1 cut(s) 1133
NdeII GATC 7 cut(s) 315, 642, 747, 893, 973, 1182, 1225
NheI GCTAGC 1 cut(s) 1052
NlaIII CATG 8 cut(s) 38, 109, 695, 808, 922, 1020, 1137, 1294
NlaIV GGNNCC 2 cut(s) 895, 1311
NmuCI GTSAC 2 cut(s) 9, 221
NsiI ATGCAT 1 cut(s) 568
OliI CACNNNNGTG 1 cut(s) 408
PceI AGGCCT 3 cut(s) 130, 1285, 1301
PciSI GCTCTTC 2 cut(s) 645, 828
PcsI WCGNNNNNNNCGW 1 cut(s) 867
PctI GAATGC 2 cut(s) 306, 643
PfeI GAWTC 1 cut(s) 215
Psp6I CCWGG 3 cut(s) 579, 939, 1305
PspFI CCCAGC 1 cut(s) 543
PspGI CCWGG 3 cut(s) 579, 939, 1305
PspN4I GGNNCC 2 cut(s) 895, 1311
PspPI GGNCC 1 cut(s) 721
PsuI RGATCY 2 cut(s) 893, 973
RsaI GTAC 4 cut(s) 1025, 1066, 1431, 1445
RsaNI GTAC 4 cut(s) 1024, 1065, 1430, 1444
RseI CAYNNNNRTG 1 cut(s) 408
SalI GTCGAC 1 cut(s) 1112
SapI GCTCTTC 2 cut(s) 645, 828
SaqAI TTAA 3 cut(s) 134, 660, 1155
Sau3AI GATC 7 cut(s) 315, 642, 747, 893, 973, 1182, 1225
Sau96I GGNCC 1 cut(s) 721
ScrFI CCNGG 3 cut(s) 581, 941, 1307
SduI GDGCHC 3 cut(s) 238, 778, 1314
SfaNI GCATC 4 cut(s) 553, 575, 582, 664
SinI GGWCC 1 cut(s) 721
SmiMI CAYNNNNRTG 1 cut(s) 408
SmlI CTYRAG 2 cut(s) 764, 1041
SmoI CTYRAG 2 cut(s) 764, 1041
Sse9I AATT 4 cut(s) 437, 676, 794, 1459
SseBI AGGCCT 3 cut(s) 130, 1285, 1301
SspMI CTAG 4 cut(s) 570, 770, 998, 1053
StuI AGGCCT 3 cut(s) 130, 1285, 1301
StyD4I CCNGG 3 cut(s) 579, 939, 1305
StyI CCWWGG 2 cut(s) 988, 1133
TaaI ACNGT 3 cut(s) 1032, 1179, 1434
TaiI ACGT 4 cut(s) 11, 873, 1113, 1370
TaqI TCGA 6 cut(s) 298, 473, 505, 1113, 1395, 1426
TaqII GACCGA 2 cut(s) 491, 742
TasI AATT 4 cut(s) 437, 676, 794, 1459
TatI WGTACW 2 cut(s) 1023, 1429
TauI GCSGC 5 cut(s) 590, 686, 848, 1059, 1274
TfiI GAWTC 1 cut(s) 215
Tru1I TTAA 3 cut(s) 134, 660, 1155
Tru9I TTAA 3 cut(s) 134, 660, 1155
TscAI CASTG 1 cut(s) 1439
TseFI GTSAC 2 cut(s) 9, 221
TseI GCWGC 5 cut(s) 29, 44, 320, 1059, 1140
Tsp45I GTSAC 2 cut(s) 9, 221
TspDTI ATGAA 1 cut(s) 821
TspGWI ACGGA 1 cut(s) 28
TspRI CASTG 1 cut(s) 1439
VpaK11BI GGWCC 1 cut(s) 721
XagI CCTNNNNNAGG 1 cut(s) 716
XcmI CCANNNNNNNNNTGG 1 cut(s) 1411
XmiI GTMKAC 2 cut(s) 5, 1113
XspI CTAG 4 cut(s) 570, 770, 998, 1053
ZraI GACGTC 1 cut(s) 1111
Zsp2I ATGCAT 1 cut(s) 568
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.