Rmu_sc0002998.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002998.1
OG0000057
Physical Location & Seq
Forward (+)
1 .. 1745
1745 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002998.1_g000001.1.cds

Sequence Viewer

Length: 1660 bp
ctttggatgtggtctctttgcgttcaccaaatcgatactcaacttgaaagccgagcagagcaatcactgggaagttggagactgtttgcacaccagctggttttggaaccaaacattttggcacgcccagtgggacgacaaactagggtttctttctaaacgcaaccattgggaagcccacagcgataacccttaccaaaaaggttacgctagctgcccaaagcataagacctccagctacaggtcacatttgcgtgcggactgtcgtggtctatctgaggaacaagtaacgcaacgattctctctgcagaatcaatcatccagtatgtcaacttctcagggtaagaatcgctcgaccgctactgagggtcagagcgtcagtactaatcgggcaagcgagcctgttaattccgccactgtcaacactatagtggccggtgatgaggaagaggctttcgtttcgaagcctatcccggaaggagcaacctttgacgagacaattgtgatccttatggagaatgtcgagaatcatcgcaagaagatggatgcagatctcgcaagggaaactgcgaagtctgaaaggctcctccgcgagttcgatcagcgtatgactctctatgcagaaaataccaggcagcaggtcacacagacagagagtgccttgaaggcgcaagctataaccatcgctgccgcacaaaatgagcgtcacaccacaatcttgaatgctatagctgatcattccaagcaaaccgcatcaaacatagcagatctccgcaaggatggggccaacttggcaactgaagtggctatgcagagagccgaattgaaccatgcgaaggaggtgatgcactcggccttaggcgatcctaatactatccttggttctcttgcccagccgtccagttcgggcaagtatgtgcccccaaatcaacgcgaaaaggccaaccaaaacgttggttcttcgtcggcaactgtggctgctactccatcaaagaacaaggagcaggccttggttattcctggcagcaaggagaagactgcttcatcaagtggacagaccgccaagaaacaccaagtcgcgaggggtgcaggtactgcgtcagagcctgtgccttttgtccagtacgacagggacggggcagaagtggtgtatcaagagttgccgggaagctattatgcactcgaccaaactggtatcccgatcaagataaccgctctgtcaaacgaagagattacccctgcagtgactctccagcagcaagctactacccgcattgtgcaggttggggaaggatcaacgatggtaaatcaaacaaccactggacaaactgttcaccgagctgcggtgatgcctcctccacctccgggcccagaatatgtgaggcgtgaggaggttgaggagatgatcagattggcgaaccctagggcccagccagatggagagaagacacggaagatgcggccactcatctggccagatttagggtgcaatgcggccaatattagaatgatgacgtcctcaagtgcaggatctttggcacttccctatccggcgtggctttcagatggttctccaaacttaggccagggacagtggcagactggccggcgatggaactacttttccgggaaacatttgggaatattgagcctgaggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

552

Amino Acids

60.64

Weight (kDa)

7.81

Isoelectric Point (pI)

46.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1518
Acc36I ACCTGC 3 cut(s) 629, 1080, 1271
AccBSI CCGCTC 1 cut(s) 1215
AccII CGCG 3 cut(s) 592, 934, 1080
AclI AACGTT 1 cut(s) 952
AclWI GGATC 4 cut(s) 500, 858, 1301, 1538
AcoI YGGCCR 5 cut(s) 433, 1461, 1473, 1495, 1604
AcuI CTGAAG 1 cut(s) 820
AcyI GRCGYC 1 cut(s) 1515
AfaI GTAC 3 cut(s) 383, 1094, 1125
AfiI CCNNNNNNNGG 6 cut(s) 241, 836, 1343, 1365, 1482, 1581
AgsI TTSAA 4 cut(s) 47, 665, 722, 827
AjnI CCWGG 3 cut(s) 630, 1019, 1585
AleI CACNNNNGTG 1 cut(s) 429
AloI GAACNNNNNNTCC 4 cut(s) 1315, 1347, 1608, 1640
AluBI AGCT 8 cut(s) 97, 214, 238, 675, 732, 1171, 1263, 1341
AluI AGCT 8 cut(s) 97, 214, 238, 675, 732, 1171, 1263, 1341
Alw26I GTCTC 3 cut(s) 18, 73, 489
AlwI GGATC 4 cut(s) 500, 858, 1301, 1538
AlwNI CAGNNNCTG 2 cut(s) 1095, 1107
ApaI GGGCCC 2 cut(s) 1371, 1430
ApeKI GCWGC 7 cut(s) 214, 635, 687, 978, 1024, 1256, 1341
ArsI GACNNNNNNTTYG 2 cut(s) 689, 721
AspA2I CCTAGG 1 cut(s) 1422
AspLEI GCGC 1 cut(s) 671
AspS9I GGNCC 5 cut(s) 784, 1367, 1368, 1426, 1427
AsuC2I CCSGG 4 cut(s) 474, 1165, 1366, 1628
AsuHPI GGTGA 5 cut(s) 17, 450, 854, 1326, 1358
AsuII TTCGAA 1 cut(s) 462
AsuNHI GCTAGC 1 cut(s) 210
AvrII CCTAGG 1 cut(s) 1422
AxyI CCTNAGG 2 cut(s) 857, 1653
BaeGI GKGCMC 3 cut(s) 922, 1371, 1430
BalI TGGCCA 1 cut(s) 1475
BanII GRGCYC 2 cut(s) 1371, 1430
BarI GAAGNNNNNNTAC 2 cut(s) 317, 349
BbsI GAAGAC 2 cut(s) 1041, 1452
BbvI GCAGC 7 cut(s) 201, 647, 674, 965, 1036, 1268, 1328
BccI CCATC 8 cut(s) 536, 690, 774, 995, 1295, 1431, 1560, 1606
BceAI ACGGC 1 cut(s) 881
BciT130I CCWGG 3 cut(s) 632, 1021, 1587
BciVI GTATCC 1 cut(s) 1206
BclI TGATCA 2 cut(s) 734, 1405
BcnI CCSGG 4 cut(s) 474, 1165, 1366, 1628
BcoDI GTCTC 3 cut(s) 18, 73, 489
BfaI CTAG 3 cut(s) 144, 211, 1423
BfmI CTRYAG 5 cut(s) 239, 306, 427, 727, 1240
BfuAI ACCTGC 3 cut(s) 629, 1080, 1271
BfuI GTATCC 1 cut(s) 1206
BglI GCCNNNNNGGC 2 cut(s) 666, 792
BglII AGATCT 2 cut(s) 551, 767
BlnI CCTAGG 1 cut(s) 1422
BmcAI AGTACT 1 cut(s) 383
Bme1390I CCNGG 7 cut(s) 474, 632, 1021, 1165, 1366, 1587, 1628
BmgT120I GGNCC 5 cut(s) 784, 1367, 1368, 1426, 1427
BmiI GGNNCC 5 cut(s) 108, 585, 785, 1369, 1428
BmrFI CCNGG 7 cut(s) 474, 632, 1021, 1165, 1366, 1587, 1628
BmrI ACTGGG 2 cut(s) 77, 122
BmsI GCATC 5 cut(s) 536, 762, 835, 1339, 1447
BmtI GCTAGC 1 cut(s) 214
BmuI ACTGGG 2 cut(s) 77, 122
BpiI GAAGAC 2 cut(s) 1041, 1452
BpmI CTGGAG 2 cut(s) 218, 1236
Bpu14I TTCGAA 1 cut(s) 462
BpuEI CTTGAG 1 cut(s) 1505
BpuMI CCSGG 4 cut(s) 474, 1165, 1366, 1628
Bsa29I ATCGAT 1 cut(s) 33
BsaBI GATNNNNATC 1 cut(s) 550
BsaHI GRCGYC 1 cut(s) 1515
BsaI GGTCTC 1 cut(s) 18
BsaJI CCNNGG 4 cut(s) 878, 1009, 1422, 1586
Bsc4I CCNNNNNNNGG 6 cut(s) 241, 836, 1343, 1365, 1482, 1581
Bse118I RCCGGY 2 cut(s) 435, 1606
Bse1I ACTGG 8 cut(s) 72, 128, 322, 901, 1121, 1196, 1325, 1607
Bse21I CCTNAGG 2 cut(s) 857, 1653
Bse3DI GCAATG 1 cut(s) 1496
Bse8I GATNNNNATC 1 cut(s) 550
BseBI CCWGG 3 cut(s) 632, 1021, 1587
BseCI ATCGAT 1 cut(s) 33
BseDI CCNNGG 4 cut(s) 878, 1009, 1422, 1586
BseGI GGATG 4 cut(s) 12, 318, 551, 785
BseJI GATNNNNATC 1 cut(s) 550
BseLI CCNNNNNNNGG 6 cut(s) 241, 836, 1343, 1365, 1482, 1581
BseMI GCAATG 1 cut(s) 1496
BseMII CTCAG 4 cut(s) 268, 351, 355, 1644
BseNI ACTGG 8 cut(s) 72, 128, 322, 901, 1121, 1196, 1325, 1607
BseRI GAGGAG 4 cut(s) 576, 1345, 1404, 1413
BseSI GKGCMC 3 cut(s) 922, 1371, 1430
BseXI GCAGC 7 cut(s) 201, 647, 674, 965, 1036, 1268, 1328
BseYI CCCAGC 2 cut(s) 892, 1429
BsgI GTGCAG 3 cut(s) 1108, 1299, 1546
Bsh1236I CGCG 3 cut(s) 592, 934, 1080
Bsh1285I CGRYCG 1 cut(s) 358
BshVI ATCGAT 1 cut(s) 33
BsiEI CGRYCG 1 cut(s) 358
BsiSI CCGG 7 cut(s) 436, 474, 1164, 1365, 1551, 1607, 1627
BslFI GGGAC 3 cut(s) 147, 1146, 1603
BslI CCNNNNNNNGG 6 cut(s) 241, 836, 1343, 1365, 1482, 1581
BsmAI GTCTC 3 cut(s) 18, 73, 489
BsmFI GGGAC 3 cut(s) 147, 1146, 1603
BsmI GAATGC 1 cut(s) 728
Bso31I GGTCTC 1 cut(s) 18
Bsp119I TTCGAA 1 cut(s) 462
Bsp120I GGGCCC 2 cut(s) 1367, 1426
Bsp1286I GDGCHC 3 cut(s) 922, 1371, 1430
Bsp68I TCGCGA 1 cut(s) 1080
BspCNI CTCAG 4 cut(s) 269, 350, 356, 1645
BspDI ATCGAT 1 cut(s) 33
BspFNI CGCG 3 cut(s) 592, 934, 1080
BspLI GGNNCC 5 cut(s) 108, 585, 785, 1369, 1428
BspMAI CTGCAG 2 cut(s) 310, 1244
BspMI ACCTGC 3 cut(s) 629, 1080, 1271
BspOI GCTAGC 1 cut(s) 214
BspPI GGATC 4 cut(s) 500, 858, 1301, 1538
BspT104I TTCGAA 1 cut(s) 462
BspTNI GGTCTC 1 cut(s) 18
BsrBI CCGCTC 1 cut(s) 1215
BsrDI GCAATG 1 cut(s) 1496
BsrFI RCCGGY 2 cut(s) 435, 1606
BsrI ACTGG 8 cut(s) 72, 128, 322, 901, 1121, 1196, 1325, 1607
BssAI RCCGGY 2 cut(s) 435, 1606
BssECI CCNNGG 4 cut(s) 878, 1009, 1422, 1586
BssNI GRCGYC 1 cut(s) 1515
BssT1I CCWWGG 3 cut(s) 878, 1009, 1422
Bst2UI CCWGG 3 cut(s) 632, 1021, 1587
Bst4CI ACNGT 6 cut(s) 84, 264, 419, 974, 1331, 1594
Bst6I CTCTTC 2 cut(s) 442, 1222
BstACI GRCGYC 1 cut(s) 1515
BstAPI GCANNNNNTGC 1 cut(s) 1095
BstBI TTCGAA 1 cut(s) 462
BstC8I GCNNGC 9 cut(s) 124, 212, 256, 395, 399, 673, 1006, 1261, 1608
BstDEI CTNAG 6 cut(s) 277, 337, 364, 857, 1580, 1653
BstF5I GGATG 4 cut(s) 12, 318, 551, 785
BstFNI CGCG 3 cut(s) 592, 934, 1080
BstHHI GCGC 1 cut(s) 671
BstMAI GTCTC 3 cut(s) 18, 73, 489
BstMCI CGRYCG 1 cut(s) 358
BstMWI GCNNNNNNNGC 6 cut(s) 555, 666, 792, 975, 1086, 1095
BstNI CCWGG 3 cut(s) 632, 1021, 1587
BstSCI CCNGG 7 cut(s) 472, 630, 1019, 1163, 1364, 1585, 1626
BstSFI CTRYAG 5 cut(s) 239, 306, 427, 727, 1240
BstSLI GKGCMC 3 cut(s) 922, 1371, 1430
BstUI CGCG 3 cut(s) 592, 934, 1080
BstV1I GCAGC 7 cut(s) 201, 647, 674, 965, 1036, 1268, 1328
BstV2I GAAGAC 2 cut(s) 1041, 1452
BstX2I RGATCY 3 cut(s) 551, 767, 1530
BstXI CCANNNNNNTGG 3 cut(s) 954, 1437, 1471
BstYI RGATCY 3 cut(s) 551, 767, 1530
Bsu15I ATCGAT 1 cut(s) 33
Bsu36I CCTNAGG 2 cut(s) 857, 1653
BsuI GTATCC 1 cut(s) 1206
BsuTUI ATCGAT 1 cut(s) 33
BtgZI GCGATG 3 cut(s) 516, 668, 1625
BtsCI GGATG 4 cut(s) 12, 318, 551, 785
BtsI GCAGTG 1 cut(s) 1249
BtsIMutI CAGTG 6 cut(s) 65, 135, 415, 1249, 1318, 1599
BtuMI TCGCGA 1 cut(s) 1080
BveI ACCTGC 3 cut(s) 629, 1080, 1271
Cac8I GCNNGC 9 cut(s) 124, 212, 256, 395, 399, 673, 1006, 1261, 1608
CaiI CAGNNNCTG 2 cut(s) 1095, 1107
CfoI GCGC 1 cut(s) 671
Cfr10I RCCGGY 2 cut(s) 435, 1606
Cfr13I GGNCC 5 cut(s) 784, 1367, 1368, 1426, 1427
ClaI ATCGAT 1 cut(s) 33
CseI GACGC 3 cut(s) 365, 693, 1087
Csp6I GTAC 3 cut(s) 382, 1093, 1124
CspCI CAANNNNNGTGG 2 cut(s) 784, 819
CviAII CATG 1 cut(s) 831
CviQI GTAC 3 cut(s) 382, 1093, 1124
DdeI CTNAG 6 cut(s) 277, 337, 364, 857, 1580, 1653
EaeI YGGCCR 5 cut(s) 433, 1461, 1473, 1495, 1604
Eam1104I CTCTTC 2 cut(s) 442, 1222
EarI CTCTTC 2 cut(s) 442, 1222
EciI GGCGGA 1 cut(s) 401
Eco130I CCWWGG 3 cut(s) 878, 1009, 1422
Eco147I AGGCCT 1 cut(s) 1008
Eco24I GRGCYC 2 cut(s) 1371, 1430
Eco31I GGTCTC 1 cut(s) 18
Eco57I CTGAAG 1 cut(s) 820
Eco81I CCTNAGG 2 cut(s) 857, 1653
EcoO109I RGGNCCY 1 cut(s) 1426
EcoRII CCWGG 3 cut(s) 630, 1019, 1585
EcoT14I CCWWGG 3 cut(s) 878, 1009, 1422
EcoT38I GRGCYC 2 cut(s) 1371, 1430
ErhI CCWWGG 3 cut(s) 878, 1009, 1422
FaeI CATG 1 cut(s) 834
FaqI GGGAC 3 cut(s) 147, 1146, 1603
FatI CATG 1 cut(s) 830
FauI CCCGC 1 cut(s) 1278
FbaI TGATCA 2 cut(s) 734, 1405
FokI GGATG 4 cut(s) 19, 305, 558, 792
FriOI GRGCYC 2 cut(s) 1371, 1430
FspBI CTAG 3 cut(s) 144, 211, 1423
GlaI GCGC 1 cut(s) 670
GsaI CCCAGC 2 cut(s) 896, 1433
GsuI CTGGAG 2 cut(s) 218, 1236
HapII CCGG 7 cut(s) 436, 474, 1164, 1365, 1551, 1607, 1627
HgaI GACGC 3 cut(s) 365, 693, 1087
HhaI GCGC 1 cut(s) 671
Hin1I GRCGYC 1 cut(s) 1515
Hin1II CATG 1 cut(s) 834
Hin6I GCGC 1 cut(s) 669
HinP1I GCGC 1 cut(s) 669
HincII GTYRAC 2 cut(s) 331, 422
HindII GTYRAC 2 cut(s) 331, 422
HinfI GANTC 6 cut(s) 298, 311, 347, 527, 611, 1247
HpaII CCGG 7 cut(s) 436, 474, 1164, 1365, 1551, 1607, 1627
HphI GGTGA 5 cut(s) 17, 450, 854, 1326, 1358
Hpy166II GTNNAC 5 cut(s) 25, 331, 422, 1053, 1334
Hpy188I TCNGA 6 cut(s) 278, 373, 578, 1103, 1410, 1565
Hpy188III TCNNGA 6 cut(s) 524, 719, 1079, 1155, 1199, 1205
Hpy8I GTNNAC 5 cut(s) 25, 331, 422, 1053, 1334
Hpy99I CGWCG 1 cut(s) 968
HpyAV CCTTC 4 cut(s) 471, 659, 830, 1284
HpyCH4III ACNGT 6 cut(s) 84, 264, 419, 974, 1331, 1594
HpyCH4IV ACGT 2 cut(s) 952, 1515
HpyF10VI GCNNNNNNNGC 6 cut(s) 555, 666, 792, 975, 1086, 1095
HpyF3I CTNAG 6 cut(s) 277, 337, 364, 857, 1580, 1653
HpySE526I ACGT 2 cut(s) 952, 1515
Hsp92I GRCGYC 1 cut(s) 1515
Hsp92II CATG 1 cut(s) 834
HspAI GCGC 1 cut(s) 669
KroI GCCGGC 1 cut(s) 1606
KroNI GCCGGC 1 cut(s) 1608
Ksp22I TGATCA 2 cut(s) 734, 1405
LmnI GCTCC 3 cut(s) 480, 589, 1001
Lsp1109I GCAGC 7 cut(s) 201, 647, 674, 965, 1036, 1268, 1328
LweI GCATC 5 cut(s) 536, 762, 835, 1339, 1447
MaeI CTAG 3 cut(s) 144, 211, 1423
MaeII ACGT 2 cut(s) 952, 1515
MaeIII GTNAC 6 cut(s) 204, 244, 287, 641, 705, 1244
MbiI CCGCTC 1 cut(s) 1215
MboII GAAGA 7 cut(s) 459, 551, 952, 1046, 1239, 1457, 1466
MfeI CAATTG 1 cut(s) 499
MflI RGATCY 3 cut(s) 551, 767, 1530
MhlI GDGCHC 3 cut(s) 922, 1371, 1430
MlsI TGGCCA 1 cut(s) 1475
MluCI AATT 3 cut(s) 407, 499, 822
MluNI TGGCCA 1 cut(s) 1475
MlyI GAGTC 2 cut(s) 605, 1241
MmeI TCCRAC 1 cut(s) 56
Mox20I TGGCCA 1 cut(s) 1475
MroNI GCCGGC 1 cut(s) 1606
MscI TGGCCA 1 cut(s) 1475
MseI TTAA 1 cut(s) 406
MslI CAYNNNNRTG 2 cut(s) 253, 429
Msp20I TGGCCA 1 cut(s) 1475
MspA1I CMGCKG 1 cut(s) 97
MspI CCGG 7 cut(s) 436, 474, 1164, 1365, 1551, 1607, 1627
MspR9I CCNGG 7 cut(s) 474, 632, 1021, 1165, 1366, 1587, 1628
MunI CAATTG 1 cut(s) 499
Mva1269I GAATGC 1 cut(s) 728
MvaI CCWGG 3 cut(s) 632, 1021, 1587
MvnI CGCG 3 cut(s) 592, 934, 1080
MwoI GCNNNNNNNGC 6 cut(s) 555, 666, 792, 975, 1086, 1095
NaeI GCCGGC 1 cut(s) 1608
NciI CCSGG 4 cut(s) 474, 1165, 1366, 1628
NgoMIV GCCGGC 1 cut(s) 1606
NheI GCTAGC 1 cut(s) 210
NlaIII CATG 1 cut(s) 834
NlaIV GGNNCC 5 cut(s) 108, 585, 785, 1369, 1428
NmeAIII GCCGAG 2 cut(s) 77, 831
NmuCI GTSAC 4 cut(s) 244, 641, 705, 1244
NruI TCGCGA 1 cut(s) 1080
NspV TTCGAA 1 cut(s) 462
OliI CACNNNNGTG 1 cut(s) 429
PceI AGGCCT 1 cut(s) 1008
PctI GAATGC 1 cut(s) 728
PdiI GCCGGC 1 cut(s) 1608
PfeI GAWTC 4 cut(s) 298, 311, 347, 527
PfoI TCCNGGA 2 cut(s) 472, 1626
PleI GAGTC 2 cut(s) 605, 1241
PpsI GAGTC 2 cut(s) 605, 1241
Psp1406I AACGTT 1 cut(s) 952
Psp6I CCWGG 3 cut(s) 630, 1019, 1585
PspFI CCCAGC 2 cut(s) 892, 1429
PspGI CCWGG 3 cut(s) 630, 1019, 1585
PspN4I GGNNCC 5 cut(s) 108, 585, 785, 1369, 1428
PspOMI GGGCCC 2 cut(s) 1367, 1426
PspPI GGNCC 5 cut(s) 784, 1367, 1368, 1426, 1427
PstI CTGCAG 2 cut(s) 310, 1244
PstNI CAGNNNCTG 2 cut(s) 1095, 1107
PsuI RGATCY 3 cut(s) 551, 767, 1530
PvuII CAGCTG 1 cut(s) 97
RruI TCGCGA 1 cut(s) 1080
RsaI GTAC 3 cut(s) 383, 1094, 1125
RsaNI GTAC 3 cut(s) 382, 1093, 1124
RseI CAYNNNNRTG 2 cut(s) 253, 429
SaqAI TTAA 1 cut(s) 406
Sau96I GGNCC 5 cut(s) 784, 1367, 1368, 1426, 1427
ScaI AGTACT 1 cut(s) 383
SchI GAGTC 2 cut(s) 605, 1241
ScrFI CCNGG 7 cut(s) 474, 632, 1021, 1165, 1366, 1587, 1628
SduI GDGCHC 3 cut(s) 922, 1371, 1430
SfaNI GCATC 5 cut(s) 536, 762, 835, 1339, 1447
SfcI CTRYAG 5 cut(s) 239, 306, 427, 727, 1240
SfuI TTCGAA 1 cut(s) 462
SmiMI CAYNNNNRTG 2 cut(s) 253, 429
SmlI CTYRAG 1 cut(s) 1520
SmoI CTYRAG 1 cut(s) 1520
Sse9I AATT 3 cut(s) 407, 499, 822
SseBI AGGCCT 1 cut(s) 1008
SspI AATATT 2 cut(s) 1502, 1645
SspMI CTAG 3 cut(s) 144, 211, 1423
StuI AGGCCT 1 cut(s) 1008
StyD4I CCNGG 7 cut(s) 472, 630, 1019, 1163, 1364, 1585, 1626
StyI CCWWGG 3 cut(s) 878, 1009, 1422
TaaI ACNGT 6 cut(s) 84, 264, 419, 974, 1331, 1594
TaiI ACGT 2 cut(s) 955, 1518
TaqI TCGA 6 cut(s) 33, 354, 462, 523, 598, 1183
TasI AATT 3 cut(s) 407, 499, 822
TatI WGTACW 1 cut(s) 381
TauI GCSGC 3 cut(s) 693, 1463, 1497
TfiI GAWTC 4 cut(s) 298, 311, 347, 527
Tru1I TTAA 1 cut(s) 406
Tru9I TTAA 1 cut(s) 406
TscAI CASTG 6 cut(s) 72, 135, 422, 1249, 1325, 1599
TseFI GTSAC 4 cut(s) 244, 641, 705, 1244
TseI GCWGC 7 cut(s) 214, 635, 687, 978, 1024, 1256, 1341
Tsp45I GTSAC 4 cut(s) 244, 641, 705, 1244
TspDTI ATGAA 1 cut(s) 1033
TspGWI ACGGA 1 cut(s) 1466
TspRI CASTG 6 cut(s) 72, 135, 422, 1249, 1325, 1599
XmaJI CCTAGG 1 cut(s) 1422
XspI CTAG 3 cut(s) 144, 211, 1423
ZraI GACGTC 1 cut(s) 1516
ZrmI AGTACT 1 cut(s) 383
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.