Rmu_sc0005627.1_g000006

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005627.1
OG0000057
Physical Location & Seq
Forward (+)
15477 .. 16691
1215 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005627.1_g000006.1.cds

Sequence Viewer

Length: 1215 bp
atggtcgatgtgaactgggccaagcagaaccagaggaaaccaaccttggatttgagtacaaagggcgaaaaggaaagtctgccgaggatgagacccctgcaaagaagaaagctaaaccagttggtcaagcctcacctgtggtcctatgctcgcgatgcaaagaagagtgtggcatccaagtgtcacatgaagaggtcgagcagatatttcgttttggctctttcccacccatcaggtgggcctcgccatcgcgcgaactatcaaccttctagcccaagagaaaaagagaaaatggagtcaacaccatccccaaaggactccaatttgtttaagaagctgagagcggccacggttgatcagaaacaagacgagaaggctacgaacaagagcaaagacattctaaccaagccctacatcccgcctacgccagttgccatcatcaaggaaggaaaatggtacaccagggaaaaggggaagggaatggaaataagtacttccaagaagaggaaactgcagcgtaggtttggcgaagccaagcgcgcgctagagtctctggaccagggcctaatcaagccttcacaattggttaaatcacctgagcagtatcagaaggagatggaagcactagttgctaaaccattaatggctccccgcagccttcaaaaacaagcgaactcggcaacagggtcatctaagcccagtgttttttgcaggatcactgaggagagaacacctccactagctcaaaaggagagttcgcagagtcggctaccacatgtcaggcgcaggttgtttcacgaagaaccagaagctaaatcctcggtttttgggcgactggggggcaaggataagactaccgatgctttacagtggagaccaaaaaaggtccagagtatagtagtcgctcccctagaggtaagcatggcaagggaaccgaaaccaggctcccctaagaaggctcccgtgatacaggaacacaagcagtgtgaggtaaaaggccttacagaagagtcgttggtggcccgtttggctaagcaattcaacgctgacatccctatcaatgaacccaagcttaacctggaggatgacatggaggagacagatatgactgacacgtcttgcaacatggtttacatactccccgtgaggtatgcactaccggtcactgctcaggactccgtagaagctgatgaaagtaatgcacagcccttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

404

Amino Acids

45.73

Weight (kDa)

9.83

Isoelectric Point (pI)

57.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1114
Acc36I ACCTGC 1 cut(s) 777
AccB7I CCANNNNNTGG 1 cut(s) 236
AccBSI CCGCTC 1 cut(s) 344
AccII CGCG 5 cut(s) 153, 252, 254, 540, 542
AciI CCGC 3 cut(s) 344, 419, 652
AclWI GGATC 1 cut(s) 722
AcoI YGGCCR 1 cut(s) 345
AfaI GTAC 3 cut(s) 58, 458, 493
AfiI CCNNNNNNNGG 4 cut(s) 236, 504, 941, 955
AflIII ACRYGT 2 cut(s) 775, 1113
AgeI ACCGGT 1 cut(s) 1159
AgsI TTSAA 2 cut(s) 662, 1042
AhlI ACTAGT 1 cut(s) 625
AjiI CACGTC 1 cut(s) 1116
AjnI CCWGG 4 cut(s) 461, 558, 940, 1077
AjuI GAANNNNNNNTTGG 2 cut(s) 29, 61
AluBI AGCT 6 cut(s) 112, 337, 743, 812, 1072, 1187
AluI AGCT 6 cut(s) 112, 337, 743, 812, 1072, 1187
Alw26I GTCTC 4 cut(s) 85, 555, 868, 1091
AlwI GGATC 1 cut(s) 722
AoxI GGCC 6 cut(s) 18, 239, 345, 562, 997, 1020
ApeKI GCWGC 2 cut(s) 514, 654
AseI ATTAAT 1 cut(s) 641
AsiGI ACCGGT 1 cut(s) 1159
AspLEI GCGC 5 cut(s) 254, 540, 542, 544, 786
AspS9I GGNCC 7 cut(s) 18, 141, 239, 556, 562, 886, 1021
AsuHPI GGTGA 2 cut(s) 125, 585
AvaII GGWCC 3 cut(s) 141, 556, 886
BbvI GCAGC 2 cut(s) 526, 666
BccI CCATC 5 cut(s) 238, 255, 313, 443, 610
BcgI CGANNNNNNTGC 2 cut(s) 190, 224
BciT130I CCWGG 4 cut(s) 463, 560, 942, 1079
BclI TGATCA 1 cut(s) 355
BcoDI GTCTC 4 cut(s) 85, 555, 868, 1091
BcuI ACTAGT 1 cut(s) 625
BfaI CTAG 5 cut(s) 270, 545, 626, 740, 911
BfmI CTRYAG 1 cut(s) 512
BfuAI ACCTGC 1 cut(s) 777
BglI GCCNNNNNGGC 1 cut(s) 1028
BisI GCNGC 3 cut(s) 345, 515, 655
BlpI GCTNAGC 1 cut(s) 1032
BlsI GCNGC 3 cut(s) 346, 516, 656
BmcAI AGTACT 1 cut(s) 493
Bme1390I CCNGG 4 cut(s) 463, 560, 942, 1079
Bme18I GGWCC 3 cut(s) 141, 556, 886
BmgBI CACGTC 1 cut(s) 1116
BmgT120I GGNCC 7 cut(s) 18, 141, 239, 556, 562, 886, 1021
BmiI GGNNCC 4 cut(s) 648, 933, 946, 960
BmrFI CCNGG 4 cut(s) 463, 560, 942, 1079
BmrI ACTGGG 3 cut(s) 25, 693, 845
BmsI GCATC 3 cut(s) 145, 182, 850
BmuI ACTGGG 3 cut(s) 25, 693, 845
BplI GAGNNNNNCTC 2 cut(s) 718, 750
BpmI CTGGAG 1 cut(s) 1100
Bpu10I CCTNAGC 2 cut(s) 597, 1170
Bpu1102I GCTNAGC 1 cut(s) 1032
BsaI GGTCTC 2 cut(s) 85, 868
BsaJI CCNNGG 6 cut(s) 45, 83, 348, 462, 559, 819
BsaWI WCCGGW 1 cut(s) 1159
Bsc4I CCNNNNNNNGG 4 cut(s) 236, 504, 941, 955
Bse118I RCCGGY 1 cut(s) 1159
Bse1I ACTGG 5 cut(s) 20, 118, 428, 699, 840
BseBI CCWGG 4 cut(s) 463, 560, 942, 1079
BseDI CCNNGG 6 cut(s) 45, 83, 348, 462, 559, 819
BseGI GGATG 6 cut(s) 93, 173, 305, 414, 1050, 1090
BseLI CCNNNNNNNGG 4 cut(s) 236, 504, 941, 955
BseMII CTCAG 4 cut(s) 329, 588, 711, 1184
BseNI ACTGG 5 cut(s) 20, 118, 428, 699, 840
BsePI GCGCGC 2 cut(s) 538, 540
BseRI GAGGAG 2 cut(s) 737, 1109
BseXI GCAGC 2 cut(s) 526, 666
Bsh1236I CGCG 5 cut(s) 153, 252, 254, 540, 542
BshFI GGCC 6 cut(s) 20, 241, 347, 564, 999, 1022
BshTI ACCGGT 1 cut(s) 1159
BsiSI CCGG 1 cut(s) 1160
BslI CCNNNNNNNGG 4 cut(s) 236, 504, 941, 955
BsmAI GTCTC 4 cut(s) 85, 555, 868, 1091
BsnI GGCC 6 cut(s) 20, 241, 347, 564, 999, 1022
Bso31I GGTCTC 2 cut(s) 85, 868
Bsp143I GATC 2 cut(s) 355, 714
Bsp1720I GCTNAGC 1 cut(s) 1032
Bsp68I TCGCGA 1 cut(s) 153
BspACI CCGC 3 cut(s) 344, 419, 652
BspANI GGCC 6 cut(s) 20, 241, 347, 564, 999, 1022
BspCNI CTCAG 4 cut(s) 330, 589, 712, 1183
BspFNI CGCG 5 cut(s) 153, 252, 254, 540, 542
BspLI GGNNCC 4 cut(s) 648, 933, 946, 960
BspMAI CTGCAG 1 cut(s) 516
BspMI ACCTGC 1 cut(s) 777
BspPI GGATC 1 cut(s) 722
BspTNI GGTCTC 2 cut(s) 85, 868
BsrBI CCGCTC 1 cut(s) 344
BsrFI RCCGGY 1 cut(s) 1159
BsrI ACTGG 5 cut(s) 20, 118, 428, 699, 840
BssAI RCCGGY 1 cut(s) 1159
BssECI CCNNGG 6 cut(s) 45, 83, 348, 462, 559, 819
BssHII GCGCGC 2 cut(s) 538, 540
BssMI GATC 2 cut(s) 355, 714
BssT1I CCWWGG 1 cut(s) 45
Bst2UI CCWGG 4 cut(s) 463, 560, 942, 1079
Bst4CI ACNGT 2 cut(s) 352, 870
Bst6I CTCTTC 4 cut(s) 158, 185, 497, 1002
BstAPI GCANNNNNTGC 1 cut(s) 629
BstC8I GCNNGC 3 cut(s) 151, 540, 542
BstDEI CTNAG 7 cut(s) 338, 597, 693, 720, 951, 1032, 1170
BstDSI CCRYGG 1 cut(s) 348
BstF5I GGATG 6 cut(s) 93, 173, 305, 414, 1050, 1090
BstFNI CGCG 5 cut(s) 153, 252, 254, 540, 542
BstHHI GCGC 5 cut(s) 254, 540, 542, 544, 786
BstKTI GATC 2 cut(s) 358, 717
BstMAI GTCTC 4 cut(s) 85, 555, 868, 1091
BstMBI GATC 2 cut(s) 355, 714
BstMWI GCNNNNNNNGC 6 cut(s) 155, 539, 629, 677, 766, 1028
BstNI CCWGG 4 cut(s) 463, 560, 942, 1079
BstNSI RCATGY 1 cut(s) 779
BstSCI CCNGG 4 cut(s) 461, 558, 940, 1077
BstSFI CTRYAG 1 cut(s) 512
BstUI CGCG 5 cut(s) 153, 252, 254, 540, 542
BstV1I GCAGC 2 cut(s) 526, 666
BsuRI GGCC 6 cut(s) 20, 241, 347, 564, 999, 1022
BtgI CCRYGG 1 cut(s) 348
BtgZI GCGATG 2 cut(s) 168, 233
BtrI CACGTC 1 cut(s) 1116
BtsCI GGATG 6 cut(s) 93, 173, 305, 414, 1050, 1090
BtsI GCAGTG 2 cut(s) 989, 1164
BtsIMutI CAGTG 5 cut(s) 706, 717, 875, 989, 1164
BtuMI TCGCGA 1 cut(s) 153
BveI ACCTGC 1 cut(s) 777
Cac8I GCNNGC 3 cut(s) 151, 540, 542
CfoI GCGC 5 cut(s) 254, 540, 542, 544, 786
Cfr10I RCCGGY 1 cut(s) 1159
Cfr13I GGNCC 7 cut(s) 18, 141, 239, 556, 562, 886, 1021
Csp6I GTAC 3 cut(s) 57, 457, 492
CspAI ACCGGT 1 cut(s) 1159
CviAII CATG 5 cut(s) 187, 776, 922, 1090, 1126
CviQI GTAC 3 cut(s) 57, 457, 492
DdeI CTNAG 7 cut(s) 338, 597, 693, 720, 951, 1032, 1170
DpnI GATC 2 cut(s) 357, 716
DpnII GATC 2 cut(s) 355, 714
DrdI GACNNNNNNGTC 1 cut(s) 1114
DseDI GACNNNNNNGTC 1 cut(s) 1114
EaeI YGGCCR 1 cut(s) 345
Eam1104I CTCTTC 4 cut(s) 158, 185, 497, 1002
EarI CTCTTC 4 cut(s) 158, 185, 497, 1002
Eco130I CCWWGG 1 cut(s) 45
Eco147I AGGCCT 1 cut(s) 999
Eco31I GGTCTC 2 cut(s) 85, 868
Eco47I GGWCC 3 cut(s) 141, 556, 886
EcoO109I RGGNCCY 1 cut(s) 562
EcoRII CCWGG 4 cut(s) 461, 558, 940, 1077
EcoT14I CCWWGG 1 cut(s) 45
ErhI CCWWGG 1 cut(s) 45
FaeI CATG 5 cut(s) 190, 779, 925, 1093, 1129
FatI CATG 5 cut(s) 186, 775, 921, 1089, 1125
FauI CCCGC 2 cut(s) 426, 659
FbaI TGATCA 1 cut(s) 355
Fnu4HI GCNGC 3 cut(s) 345, 515, 655
FokI GGATG 6 cut(s) 100, 160, 292, 401, 1037, 1097
Fsp4HI GCNGC 3 cut(s) 345, 515, 655
FspBI CTAG 5 cut(s) 270, 545, 626, 740, 911
GlaI GCGC 5 cut(s) 253, 539, 541, 543, 785
GluI GCNGC 3 cut(s) 345, 515, 655
GsuI CTGGAG 1 cut(s) 1100
HaeIII GGCC 6 cut(s) 20, 241, 347, 564, 999, 1022
HapII CCGG 1 cut(s) 1160
HhaI GCGC 5 cut(s) 254, 540, 542, 544, 786
Hin1II CATG 5 cut(s) 190, 779, 925, 1093, 1129
Hin6I GCGC 5 cut(s) 252, 538, 540, 542, 784
HinP1I GCGC 5 cut(s) 252, 538, 540, 542, 784
HincII GTYRAC 1 cut(s) 300
HindII GTYRAC 1 cut(s) 300
HindIII AAGCTT 1 cut(s) 1070
HinfI GANTC 6 cut(s) 296, 317, 548, 763, 1010, 1175
HpaII CCGG 1 cut(s) 1160
HphI GGTGA 2 cut(s) 125, 585
Hpy166II GTNNAC 4 cut(s) 13, 300, 459, 1132
Hpy188I TCNGA 2 cut(s) 360, 609
Hpy188III TCNNGA 5 cut(s) 152, 554, 797, 889, 1172
Hpy8I GTNNAC 4 cut(s) 13, 300, 459, 1132
HpyAV CCTTC 8 cut(s) 276, 367, 440, 469, 585, 604, 668, 949
HpyCH4III ACNGT 2 cut(s) 352, 870
HpyCH4IV ACGT 1 cut(s) 1115
HpyCH4V TGCA 7 cut(s) 100, 158, 514, 711, 1122, 1154, 1202
HpyF10VI GCNNNNNNNGC 6 cut(s) 155, 539, 629, 677, 766, 1028
HpyF3I CTNAG 7 cut(s) 338, 597, 693, 720, 951, 1032, 1170
HpySE526I ACGT 1 cut(s) 1115
Hsp92II CATG 5 cut(s) 190, 779, 925, 1093, 1129
HspAI GCGC 5 cut(s) 252, 538, 540, 542, 784
Ksp22I TGATCA 1 cut(s) 355
Kzo9I GATC 2 cut(s) 355, 714
LmnI GCTCC 4 cut(s) 652, 910, 950, 964
Lsp1109I GCAGC 2 cut(s) 526, 666
LweI GCATC 3 cut(s) 145, 182, 850
MaeI CTAG 5 cut(s) 270, 545, 626, 740, 911
MaeII ACGT 1 cut(s) 1115
MaeIII GTNAC 2 cut(s) 182, 1162
MalI GATC 2 cut(s) 357, 716
MbiI CCGCTC 1 cut(s) 344
MboI GATC 2 cut(s) 355, 714
MboII GAAGA 6 cut(s) 117, 175, 202, 514, 812, 1019
MfeI CAATTG 1 cut(s) 581
MluCI AATT 3 cut(s) 322, 581, 1037
MlyI GAGTC 6 cut(s) 305, 311, 557, 772, 1019, 1169
MseI TTAA 4 cut(s) 330, 588, 641, 1074
MslI CAYNNNNRTG 1 cut(s) 178
MspI CCGG 1 cut(s) 1160
MspR9I CCNGG 4 cut(s) 463, 560, 942, 1079
MunI CAATTG 1 cut(s) 581
MvaI CCWGG 4 cut(s) 463, 560, 942, 1079
MvnI CGCG 5 cut(s) 153, 252, 254, 540, 542
MwoI GCNNNNNNNGC 6 cut(s) 155, 539, 629, 677, 766, 1028
NdeII GATC 2 cut(s) 355, 714
NlaIII CATG 5 cut(s) 190, 779, 925, 1093, 1129
NlaIV GGNNCC 4 cut(s) 648, 933, 946, 960
NmeAIII GCCGAG 2 cut(s) 108, 656
NmuCI GTSAC 2 cut(s) 182, 1162
NruI TCGCGA 1 cut(s) 153
NspI RCATGY 1 cut(s) 779
PauI GCGCGC 2 cut(s) 538, 540
PceI AGGCCT 1 cut(s) 999
PciI ACATGT 1 cut(s) 775
PflMI CCANNNNNTGG 1 cut(s) 236
PinAI ACCGGT 1 cut(s) 1159
PkrI GCNGC 3 cut(s) 346, 516, 656
PleI GAGTC 6 cut(s) 304, 311, 556, 771, 1018, 1169
PpsI GAGTC 6 cut(s) 304, 311, 556, 771, 1018, 1169
PscI ACATGT 1 cut(s) 775
PshBI ATTAAT 1 cut(s) 641
Psp6I CCWGG 4 cut(s) 461, 558, 940, 1077
PspGI CCWGG 4 cut(s) 461, 558, 940, 1077
PspN4I GGNNCC 4 cut(s) 648, 933, 946, 960
PspPI GGNCC 7 cut(s) 18, 141, 239, 556, 562, 886, 1021
PstI CTGCAG 1 cut(s) 516
PteI GCGCGC 2 cut(s) 538, 540
RruI TCGCGA 1 cut(s) 153
RsaI GTAC 3 cut(s) 58, 458, 493
RsaNI GTAC 3 cut(s) 57, 457, 492
RseI CAYNNNNRTG 1 cut(s) 178
SaqAI TTAA 4 cut(s) 330, 588, 641, 1074
SatI GCNGC 3 cut(s) 345, 515, 655
Sau3AI GATC 2 cut(s) 355, 714
Sau96I GGNCC 7 cut(s) 18, 141, 239, 556, 562, 886, 1021
ScaI AGTACT 1 cut(s) 493
SchI GAGTC 6 cut(s) 305, 311, 557, 772, 1019, 1169
ScrFI CCNGG 4 cut(s) 463, 560, 942, 1079
SfaNI GCATC 3 cut(s) 145, 182, 850
SfcI CTRYAG 1 cut(s) 512
SinI GGWCC 3 cut(s) 141, 556, 886
SmiMI CAYNNNNRTG 1 cut(s) 178
SpeI ACTAGT 1 cut(s) 625
Sse9I AATT 3 cut(s) 322, 581, 1037
SseBI AGGCCT 1 cut(s) 999
SsiI CCGC 3 cut(s) 344, 419, 652
SspMI CTAG 5 cut(s) 270, 545, 626, 740, 911
StuI AGGCCT 1 cut(s) 999
StyD4I CCNGG 4 cut(s) 461, 558, 940, 1077
StyI CCWWGG 1 cut(s) 45
TaaI ACNGT 2 cut(s) 352, 870
TaiI ACGT 1 cut(s) 1118
TaqI TCGA 2 cut(s) 6, 197
TasI AATT 3 cut(s) 322, 581, 1037
TatI WGTACW 2 cut(s) 56, 491
TauI GCSGC 1 cut(s) 347
Tru1I TTAA 4 cut(s) 330, 588, 641, 1074
Tru9I TTAA 4 cut(s) 330, 588, 641, 1074
TscAI CASTG 5 cut(s) 706, 724, 875, 989, 1171
TseFI GTSAC 2 cut(s) 182, 1162
TseI GCWGC 2 cut(s) 514, 654
Tsp45I GTSAC 2 cut(s) 182, 1162
TspDTI ATGAA 3 cut(s) 203, 1077, 1206
TspGWI ACGGA 1 cut(s) 1168
TspRI CASTG 5 cut(s) 706, 724, 875, 989, 1171
Van91I CCANNNNNTGG 1 cut(s) 236
VpaK11BI GGWCC 3 cut(s) 141, 556, 886
VspI ATTAAT 1 cut(s) 641
XceI RCATGY 1 cut(s) 779
XcmI CCANNNNNNNNNTGG 2 cut(s) 233, 1075
XspI CTAG 5 cut(s) 270, 545, 626, 740, 911
ZrmI AGTACT 1 cut(s) 493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.