Rmu_sc0003089.1_g000036

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003089.1
OG0000057
Physical Location & Seq
Forward (+)
155543 .. 156967
1425 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003089.1_g000036.1.cds

Sequence Viewer

Length: 1212 bp
atgtcaactggacaagatgagaatcgctcgaccgctactgagggtcagagcgtcaatgttagccaggccagcgagcctgttgttcccaccactgtcaacactacagcgggaggtggagaaggagaggctttcgttgcgaagcctatcccagaaggagcgaccttcgaggaaaggtgcgcgattatcatggaaaatatcgagaaccatcgcaagaagatggacgccgattttgccagggaaactgcaaaggcggataagctcttacgcgaactggatcagcgtatgacccggcatacggaggatacccgacagcagatagcacaatcagaaagtgttgtgaaggcacacgccgcaggtatcgctagcgaacaggatcagcgtcagaaagcaattttggaggctattgcgggtcacaccaagcagaccgcggcggatatgagagcagaactgaatcaggcaagagatgtattgaacaaagctttaggggatcctaatgctatcttgggctctcttggccaaccatccagttcaggcaagtacgtgccgccaaatcagcgcgagaagactaacaacaatgctgtttcttcctcagctaccgttgctgctactccgttgaagaataaagaacaagccctggttattagtggtagcaaggaaaagactgcttcatcaagcggacacaccaccaagaagcaccaagccccaaagggcacgggaattgcgtccgaacccgttacgttcgtccagtacgacagtgacggggcagagatgaaggaagaaatcacgccagcggtaactctccagcagcaggctactacccgcagtgtgcatgtcggagaggggtcggcaatggtgaaccaggaagtgccggtgcaagctacccaccgaactgcggcgacacctcctccgcctccgggcccaaattatgtaagacgtgatgaagtagaggagatgatcagattggccaaccctagagcccagccggatgggatttatgaaggacctttcccgccacacatcatgctcgcacctttcccccgaggttataagaatattattttttctactttttcaggggaggacactgaagatgcggcaacacacctggccagatggttttctaagcttaggccaggaacagtggcggattggccggcaataaaatgtcaggacccaagagtcgctgcagcccgtccctcgcttcgtctataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

403

Amino Acids

43.42

Weight (kDa)

6.24

Isoelectric Point (pI)

51.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1047
AasI GACNNNNNNGTC 1 cut(s) 1178
Acc36I ACCTGC 1 cut(s) 344
AccII CGCG 4 cut(s) 179, 267, 428, 558
AclWI GGATC 4 cut(s) 282, 381, 482, 495
AcoI YGGCCR 4 cut(s) 514, 963, 1107, 1151
AcuI CTGAAG 1 cut(s) 1107
AcyI GRCGYC 1 cut(s) 222
AfaI GTAC 2 cut(s) 539, 749
AfiI CCNNNNNNNGG 4 cut(s) 295, 808, 892, 914
AgsI TTSAA 2 cut(s) 472, 616
AjiI CACGTC 1 cut(s) 935
AjnI CCWGG 6 cut(s) 63, 233, 633, 858, 1104, 1132
AjuI GAANNNNNNNTTGG 2 cut(s) 377, 409
AluBI AGCT 5 cut(s) 259, 479, 593, 878, 1126
AluI AGCT 5 cut(s) 259, 479, 593, 878, 1126
AlwI GGATC 4 cut(s) 282, 381, 482, 495
Ama87I CYCGRG 1 cut(s) 1038
AoxI GGCC 7 cut(s) 66, 514, 916, 963, 1107, 1130, 1151
ApaI GGGCCC 1 cut(s) 920
ApeKI GCWGC 4 cut(s) 602, 805, 1184, 1187
ArsI GACNNNNNNTTYG 2 cut(s) 212, 244
AspLEI GCGC 2 cut(s) 179, 558
AspS9I GGNCC 4 cut(s) 916, 917, 1001, 1171
AsuC2I CCSGG 2 cut(s) 289, 915
AsuHPI GGTGA 1 cut(s) 865
AsuNHI GCTAGC 1 cut(s) 362
AvaI CYCGRG 1 cut(s) 1038
AvaII GGWCC 2 cut(s) 1001, 1171
BaeGI GKGCMC 2 cut(s) 713, 920
BalI TGGCCA 3 cut(s) 516, 965, 1109
BamHI GGATCC 1 cut(s) 487
BanII GRGCYC 3 cut(s) 509, 920, 979
BbsI GAAGAC 1 cut(s) 569
BbvCI CCTCAGC 1 cut(s) 589
BbvI GCAGC 4 cut(s) 589, 817, 1171, 1199
BccI CCATC 5 cut(s) 211, 213, 529, 980, 1107
BciT130I CCWGG 6 cut(s) 65, 235, 635, 860, 1106, 1134
BciVI GTATCC 1 cut(s) 295
BclI TGATCA 1 cut(s) 954
BcnI CCSGG 2 cut(s) 289, 915
BfaI CTAG 2 cut(s) 363, 972
BfmI CTRYAG 2 cut(s) 102, 1185
BfuAI ACCTGC 1 cut(s) 344
BfuI GTATCC 1 cut(s) 295
BisI GCNGC 9 cut(s) 351, 429, 545, 603, 806, 894, 1095, 1185, 1188
BlsI GCNGC 9 cut(s) 352, 430, 546, 604, 807, 895, 1096, 1186, 1189
Bme1390I CCNGG 8 cut(s) 65, 235, 289, 635, 860, 915, 1106, 1134
Bme18I GGWCC 2 cut(s) 1001, 1171
BmeT110I CYCGRG 1 cut(s) 1038
BmgBI CACGTC 1 cut(s) 935
BmgT120I GGNCC 4 cut(s) 916, 917, 1001, 1171
BmiI GGNNCC 3 cut(s) 489, 918, 1173
BmrFI CCNGG 8 cut(s) 65, 235, 289, 635, 860, 915, 1106, 1134
BmsI GCATC 1 cut(s) 1081
BmtI GCTAGC 1 cut(s) 366
BpiI GAAGAC 1 cut(s) 569
BplI GAGNNNNNCTC 2 cut(s) 11, 43
BpmI CTGGAG 1 cut(s) 785
Bpu10I CCTNAGC 2 cut(s) 589, 1127
BpuMI CCSGG 2 cut(s) 289, 915
BsaAI YACGTR 1 cut(s) 541
BsaBI GATNNNNATC 1 cut(s) 21
BsaHI GRCGYC 1 cut(s) 222
BsaJI CCNNGG 4 cut(s) 234, 426, 633, 1039
BsaXI ACNNNNNCTCC 2 cut(s) 889, 919
Bsc4I CCNNNNNNNGG 4 cut(s) 295, 808, 892, 914
Bse118I RCCGGY 2 cut(s) 868, 1153
Bse1I ACTGG 4 cut(s) 13, 276, 525, 745
Bse3DI GCAATG 1 cut(s) 855
Bse8I GATNNNNATC 1 cut(s) 21
BseBI CCWGG 6 cut(s) 65, 235, 635, 860, 1106, 1134
BseDI CCNNGG 4 cut(s) 234, 426, 633, 1039
BseGI GGATG 2 cut(s) 521, 991
BseJI GATNNNNATC 1 cut(s) 21
BseLI CCNNNNNNNGG 4 cut(s) 295, 808, 892, 914
BseMI GCAATG 1 cut(s) 855
BseMII CTCAG 2 cut(s) 30, 603
BseNI ACTGG 4 cut(s) 13, 276, 525, 745
BseRI GAGGAG 2 cut(s) 894, 962
BseSI GKGCMC 2 cut(s) 713, 920
BseXI GCAGC 4 cut(s) 589, 817, 1171, 1199
BseYI CCCAGC 1 cut(s) 978
Bsh1236I CGCG 4 cut(s) 179, 267, 428, 558
Bsh1285I CGRYCG 1 cut(s) 33
BshFI GGCC 7 cut(s) 68, 516, 918, 965, 1109, 1132, 1153
BsiEI CGRYCG 1 cut(s) 33
BsiHKCI CYCGRG 1 cut(s) 1038
BsiSI CCGG 5 cut(s) 289, 869, 914, 983, 1154
BslFI GGGAC 1 cut(s) 1179
BslI CCNNNNNNNGG 4 cut(s) 295, 808, 892, 914
BsmFI GGGAC 1 cut(s) 1179
BsnI GGCC 7 cut(s) 68, 516, 918, 965, 1109, 1132, 1153
BsoBI CYCGRG 1 cut(s) 1038
Bsp120I GGGCCC 1 cut(s) 916
Bsp1286I GDGCHC 4 cut(s) 509, 713, 920, 979
Bsp143I GATC 4 cut(s) 274, 373, 487, 954
BspANI GGCC 7 cut(s) 68, 516, 918, 965, 1109, 1132, 1153
BspCNI CTCAG 2 cut(s) 31, 602
BspFNI CGCG 4 cut(s) 179, 267, 428, 558
BspLI GGNNCC 3 cut(s) 489, 918, 1173
BspMAI CTGCAG 1 cut(s) 1189
BspMI ACCTGC 1 cut(s) 344
BspOI GCTAGC 1 cut(s) 366
BspPI GGATC 4 cut(s) 282, 381, 482, 495
BsrDI GCAATG 1 cut(s) 855
BsrFI RCCGGY 2 cut(s) 868, 1153
BsrI ACTGG 4 cut(s) 13, 276, 525, 745
BssAI RCCGGY 2 cut(s) 868, 1153
BssECI CCNNGG 4 cut(s) 234, 426, 633, 1039
BssMI GATC 4 cut(s) 274, 373, 487, 954
BssNI GRCGYC 1 cut(s) 222
Bst2UI CCWGG 6 cut(s) 65, 235, 635, 860, 1106, 1134
Bst4CI ACNGT 4 cut(s) 94, 598, 755, 1141
BstACI GRCGYC 1 cut(s) 222
BstBAI YACGTR 1 cut(s) 541
BstC8I GCNNGC 8 cut(s) 70, 74, 364, 789, 810, 876, 1026, 1155
BstDEI CTNAG 4 cut(s) 39, 589, 1122, 1127
BstDSI CCRYGG 1 cut(s) 426
BstF5I GGATG 2 cut(s) 521, 991
BstFNI CGCG 4 cut(s) 179, 267, 428, 558
BstHHI GCGC 2 cut(s) 179, 558
BstKTI GATC 4 cut(s) 277, 376, 490, 957
BstMBI GATC 4 cut(s) 274, 373, 487, 954
BstMCI CGRYCG 1 cut(s) 33
BstMWI GCNNNNNNNGC 8 cut(s) 69, 134, 230, 350, 359, 513, 553, 599
BstNI CCWGG 6 cut(s) 65, 235, 635, 860, 1106, 1134
BstNSI RCATGY 1 cut(s) 833
BstSCI CCNGG 8 cut(s) 63, 233, 287, 633, 858, 913, 1104, 1132
BstSFI CTRYAG 2 cut(s) 102, 1185
BstSLI GKGCMC 2 cut(s) 713, 920
BstUI CGCG 4 cut(s) 179, 267, 428, 558
BstV1I GCAGC 4 cut(s) 589, 817, 1171, 1199
BstV2I GAAGAC 1 cut(s) 569
BstX2I RGATCY 1 cut(s) 487
BstXI CCANNNNNNTGG 1 cut(s) 986
BstYI RGATCY 1 cut(s) 487
BsuI GTATCC 1 cut(s) 295
BsuRI GGCC 7 cut(s) 68, 516, 918, 965, 1109, 1132, 1153
BtgI CCRYGG 1 cut(s) 426
BtgZI GCGATG 1 cut(s) 191
BtrI CACGTC 1 cut(s) 935
BtsCI GGATG 2 cut(s) 521, 991
BtsI GCAGTG 1 cut(s) 829
BtsIMutI CAGTG 5 cut(s) 90, 760, 829, 1083, 1146
BveI ACCTGC 1 cut(s) 344
Cac8I GCNNGC 8 cut(s) 70, 74, 364, 789, 810, 876, 1026, 1155
CfoI GCGC 2 cut(s) 179, 558
Cfr10I RCCGGY 2 cut(s) 868, 1153
Cfr13I GGNCC 4 cut(s) 916, 917, 1001, 1171
Cfr42I CCGCGG 1 cut(s) 429
CseI GACGC 4 cut(s) 40, 230, 368, 711
Csp6I GTAC 2 cut(s) 538, 748
CviAII CATG 3 cut(s) 187, 830, 1021
CviQI GTAC 2 cut(s) 538, 748
DdeI CTNAG 4 cut(s) 39, 589, 1122, 1127
DpnI GATC 4 cut(s) 276, 375, 489, 956
DpnII GATC 4 cut(s) 274, 373, 487, 954
DrdI GACNNNNNNGTC 1 cut(s) 1178
DseDI GACNNNNNNGTC 1 cut(s) 1178
EaeI YGGCCR 4 cut(s) 514, 963, 1107, 1151
EciI GGCGGA 4 cut(s) 266, 446, 897, 1160
Eco24I GRGCYC 3 cut(s) 509, 920, 979
Eco47I GGWCC 2 cut(s) 1001, 1171
Eco57I CTGAAG 1 cut(s) 1107
Eco88I CYCGRG 1 cut(s) 1038
EcoO109I RGGNCCY 2 cut(s) 1001, 1171
EcoRII CCWGG 6 cut(s) 63, 233, 633, 858, 1104, 1132
EcoT38I GRGCYC 3 cut(s) 509, 920, 979
FaeI CATG 3 cut(s) 190, 833, 1024
FaqI GGGAC 1 cut(s) 1179
FatI CATG 3 cut(s) 186, 829, 1020
FauI CCCGC 4 cut(s) 100, 400, 827, 1017
FbaI TGATCA 1 cut(s) 954
Fnu4HI GCNGC 9 cut(s) 351, 429, 545, 603, 806, 894, 1095, 1185, 1188
FokI GGATG 2 cut(s) 508, 998
FriOI GRGCYC 3 cut(s) 509, 920, 979
Fsp4HI GCNGC 9 cut(s) 351, 429, 545, 603, 806, 894, 1095, 1185, 1188
FspBI CTAG 2 cut(s) 363, 972
GlaI GCGC 2 cut(s) 178, 557
GluI GCNGC 9 cut(s) 351, 429, 545, 603, 806, 894, 1095, 1185, 1188
GsaI CCCAGC 1 cut(s) 982
GsuI CTGGAG 1 cut(s) 785
HaeIII GGCC 7 cut(s) 68, 516, 918, 965, 1109, 1132, 1153
HapII CCGG 5 cut(s) 289, 869, 914, 983, 1154
HgaI GACGC 4 cut(s) 40, 230, 368, 711
HhaI GCGC 2 cut(s) 179, 558
Hin1I GRCGYC 1 cut(s) 222
Hin1II CATG 3 cut(s) 190, 833, 1024
Hin6I GCGC 2 cut(s) 177, 556
HinP1I GCGC 2 cut(s) 177, 556
HincII GTYRAC 2 cut(s) 6, 97
HindII GTYRAC 2 cut(s) 6, 97
HindIII AAGCTT 2 cut(s) 477, 1124
HinfI GANTC 3 cut(s) 22, 451, 1179
HpaII CCGG 5 cut(s) 289, 869, 914, 983, 1154
HphI GGTGA 1 cut(s) 865
Hpy166II GTNNAC 3 cut(s) 6, 97, 856
Hpy188I TCNGA 6 cut(s) 48, 328, 384, 727, 836, 959
Hpy188III TCNNGA 2 cut(s) 199, 1169
Hpy8I GTNNAC 3 cut(s) 6, 97, 856
HpyAV CCTTC 6 cut(s) 113, 146, 172, 334, 766, 992
HpyCH4III ACNGT 4 cut(s) 94, 598, 755, 1141
HpyCH4IV ACGT 3 cut(s) 540, 737, 934
HpyCH4V TGCA 4 cut(s) 245, 829, 874, 1187
HpyF10VI GCNNNNNNNGC 8 cut(s) 69, 134, 230, 350, 359, 513, 553, 599
HpyF3I CTNAG 4 cut(s) 39, 589, 1122, 1127
HpySE526I ACGT 3 cut(s) 540, 737, 934
Hsp92I GRCGYC 1 cut(s) 222
Hsp92II CATG 3 cut(s) 190, 833, 1024
HspAI GCGC 2 cut(s) 177, 556
KroI GCCGGC 1 cut(s) 1153
KroNI GCCGGC 1 cut(s) 1155
Ksp22I TGATCA 1 cut(s) 954
KspI CCGCGG 1 cut(s) 429
Kzo9I GATC 4 cut(s) 274, 373, 487, 954
LmnI GCTCC 1 cut(s) 155
Lsp1109I GCAGC 4 cut(s) 589, 817, 1171, 1199
LweI GCATC 1 cut(s) 1081
MaeI CTAG 2 cut(s) 363, 972
MaeII ACGT 3 cut(s) 540, 737, 934
MaeIII GTNAC 4 cut(s) 410, 733, 755, 793
MalI GATC 4 cut(s) 276, 375, 489, 956
MboI GATC 4 cut(s) 274, 373, 487, 954
MboII GAAGA 6 cut(s) 226, 574, 576, 628, 788, 1100
MflI RGATCY 1 cut(s) 487
MhlI GDGCHC 4 cut(s) 509, 713, 920, 979
MlsI TGGCCA 3 cut(s) 516, 965, 1109
MluCI AATT 3 cut(s) 390, 717, 922
MluNI TGGCCA 3 cut(s) 516, 965, 1109
MlyI GAGTC 1 cut(s) 1188
MmeI TCCRAC 1 cut(s) 814
Mox20I TGGCCA 3 cut(s) 516, 965, 1109
MroNI GCCGGC 1 cut(s) 1153
MscI TGGCCA 3 cut(s) 516, 965, 1109
Msp20I TGGCCA 3 cut(s) 516, 965, 1109
MspA1I CMGCKG 3 cut(s) 107, 428, 791
MspI CCGG 5 cut(s) 289, 869, 914, 983, 1154
MspR9I CCNGG 8 cut(s) 65, 235, 289, 635, 860, 915, 1106, 1134
MvaI CCWGG 6 cut(s) 65, 235, 635, 860, 1106, 1134
MvnI CGCG 4 cut(s) 179, 267, 428, 558
MwoI GCNNNNNNNGC 8 cut(s) 69, 134, 230, 350, 359, 513, 553, 599
NaeI GCCGGC 1 cut(s) 1155
NciI CCSGG 2 cut(s) 289, 915
NdeII GATC 4 cut(s) 274, 373, 487, 954
NgoMIV GCCGGC 1 cut(s) 1153
NheI GCTAGC 1 cut(s) 362
NlaIII CATG 3 cut(s) 190, 833, 1024
NlaIV GGNNCC 3 cut(s) 489, 918, 1173
NmuCI GTSAC 2 cut(s) 410, 755
NspI RCATGY 1 cut(s) 833
PcsI WCGNNNNNNNCGW 2 cut(s) 719, 747
PdiI GCCGGC 1 cut(s) 1155
PfeI GAWTC 2 cut(s) 22, 451
PkrI GCNGC 9 cut(s) 352, 430, 546, 604, 807, 895, 1096, 1186, 1189
PleI GAGTC 1 cut(s) 1187
PpsI GAGTC 1 cut(s) 1187
Ppu21I YACGTR 1 cut(s) 541
PpuMI RGGWCCY 2 cut(s) 1001, 1171
PsiI TTATAA 1 cut(s) 1047
Psp5II RGGWCCY 2 cut(s) 1001, 1171
Psp6I CCWGG 6 cut(s) 63, 233, 633, 858, 1104, 1132
PspFI CCCAGC 1 cut(s) 978
PspGI CCWGG 6 cut(s) 63, 233, 633, 858, 1104, 1132
PspN4I GGNNCC 3 cut(s) 489, 918, 1173
PspOMI GGGCCC 1 cut(s) 916
PspPI GGNCC 4 cut(s) 916, 917, 1001, 1171
PspPPI RGGWCCY 2 cut(s) 1001, 1171
PstI CTGCAG 1 cut(s) 1189
PsuI RGATCY 1 cut(s) 487
RsaI GTAC 2 cut(s) 539, 749
RsaNI GTAC 2 cut(s) 538, 748
SacII CCGCGG 1 cut(s) 429
SatI GCNGC 9 cut(s) 351, 429, 545, 603, 806, 894, 1095, 1185, 1188
Sau3AI GATC 4 cut(s) 274, 373, 487, 954
Sau96I GGNCC 4 cut(s) 916, 917, 1001, 1171
SchI GAGTC 1 cut(s) 1188
ScrFI CCNGG 8 cut(s) 65, 235, 289, 635, 860, 915, 1106, 1134
SduI GDGCHC 4 cut(s) 509, 713, 920, 979
SfaNI GCATC 1 cut(s) 1081
SfcI CTRYAG 2 cut(s) 102, 1185
Sfr303I CCGCGG 1 cut(s) 429
SgrBI CCGCGG 1 cut(s) 429
SinI GGWCC 2 cut(s) 1001, 1171
Sse9I AATT 3 cut(s) 390, 717, 922
SspI AATATT 1 cut(s) 1054
SspMI CTAG 2 cut(s) 363, 972
StyD4I CCNGG 8 cut(s) 63, 233, 287, 633, 858, 913, 1104, 1132
TaaI ACNGT 4 cut(s) 94, 598, 755, 1141
TaiI ACGT 3 cut(s) 543, 740, 937
TaqI TCGA 3 cut(s) 29, 165, 198
TasI AATT 3 cut(s) 390, 717, 922
TauI GCSGC 5 cut(s) 353, 431, 547, 896, 1097
TfiI GAWTC 2 cut(s) 22, 451
TscAI CASTG 5 cut(s) 97, 760, 829, 1090, 1146
TseFI GTSAC 2 cut(s) 410, 755
TseI GCWGC 4 cut(s) 602, 805, 1184, 1187
Tsp45I GTSAC 2 cut(s) 410, 755
TspDTI ATGAA 4 cut(s) 657, 785, 954, 1011
TspGWI ACGGA 2 cut(s) 311, 600
TspRI CASTG 5 cut(s) 97, 760, 829, 1090, 1146
VpaK11BI GGWCC 2 cut(s) 1001, 1171
XceI RCATGY 1 cut(s) 833
XspI CTAG 2 cut(s) 363, 972
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.