Protein of unknown function (DUF616)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 479 |
| AciI | CCGC | 3 cut(s) | 24, 107, 278 |
| AcsI | RAATTY | 1 cut(s) | 423 |
| AfaI | GTAC | 1 cut(s) | 255 |
| AgsI | TTSAA | 3 cut(s) | 41, 50, 412 |
| AjiI | CACGTC | 1 cut(s) | 128 |
| AjnI | CCWGG | 1 cut(s) | 342 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 458, 490 |
| AleI | CACNNNNGTG | 1 cut(s) | 185 |
| AluBI | AGCT | 5 cut(s) | 67, 103, 195, 288, 445 |
| AluI | AGCT | 5 cut(s) | 67, 103, 195, 288, 445 |
| AoxI | GGCC | 3 cut(s) | 3, 30, 279 |
| ApeKI | GCWGC | 5 cut(s) | 10, 142, 150, 192, 374 |
| ApoI | RAATTY | 1 cut(s) | 423 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 441, 473 |
| AspLEI | GCGC | 1 cut(s) | 508 |
| AspS9I | GGNCC | 3 cut(s) | 4, 280, 340 |
| AsuC2I | CCSGG | 2 cut(s) | 258, 391 |
| AsuHPI | GGTGA | 1 cut(s) | 454 |
| AsuII | TTCGAA | 1 cut(s) | 198 |
| AvaII | GGWCC | 1 cut(s) | 340 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 237, 270 |
| BbsI | GAAGAC | 1 cut(s) | 451 |
| BbvI | GCAGC | 5 cut(s) | 22, 154, 162, 204, 361 |
| BccI | CCATC | 1 cut(s) | 327 |
| BciT130I | CCWGG | 1 cut(s) | 344 |
| BcnI | CCSGG | 2 cut(s) | 258, 391 |
| BfmI | CTRYAG | 1 cut(s) | 15 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 503 |
| BisI | GCNGC | 6 cut(s) | 11, 143, 151, 193, 279, 375 |
| BlsI | GCNGC | 6 cut(s) | 12, 144, 152, 194, 280, 376 |
| Bme1390I | CCNGG | 3 cut(s) | 258, 344, 391 |
| Bme18I | GGWCC | 1 cut(s) | 340 |
| BmgBI | CACGTC | 1 cut(s) | 128 |
| BmgT120I | GGNCC | 3 cut(s) | 4, 280, 340 |
| BmiI | GGNNCC | 2 cut(s) | 123, 435 |
| BmrFI | CCNGG | 3 cut(s) | 258, 344, 391 |
| BmsI | GCATC | 3 cut(s) | 211, 245, 484 |
| BpiI | GAAGAC | 1 cut(s) | 451 |
| Bpu10I | CCTNAGC | 1 cut(s) | 284 |
| Bpu14I | TTCGAA | 1 cut(s) | 198 |
| BpuMI | CCSGG | 2 cut(s) | 258, 391 |
| Bsa29I | ATCGAT | 1 cut(s) | 452 |
| BsaJI | CCNNGG | 1 cut(s) | 429 |
| Bse118I | RCCGGY | 1 cut(s) | 295 |
| BseBI | CCWGG | 1 cut(s) | 344 |
| BseCI | ATCGAT | 1 cut(s) | 452 |
| BseDI | CCNNGG | 1 cut(s) | 429 |
| BseGI | GGATG | 4 cut(s) | 75, 226, 236, 352 |
| BseMII | CTCAG | 4 cut(s) | 75, 223, 275, 462 |
| BseRI | GAGGAG | 1 cut(s) | 197 |
| BseXI | GCAGC | 5 cut(s) | 22, 154, 162, 204, 361 |
| BseYI | CCCAGC | 1 cut(s) | 6 |
| Bsh1236I | CGCG | 1 cut(s) | 479 |
| Bsh1285I | CGRYCG | 1 cut(s) | 456 |
| BshFI | GGCC | 3 cut(s) | 5, 32, 281 |
| BshVI | ATCGAT | 1 cut(s) | 452 |
| BsiEI | CGRYCG | 1 cut(s) | 456 |
| BsiSI | CCGG | 3 cut(s) | 257, 296, 390 |
| BslFI | GGGAC | 1 cut(s) | 259 |
| BsmFI | GGGAC | 1 cut(s) | 259 |
| BsmI | GAATGC | 1 cut(s) | 238 |
| BsnI | GGCC | 3 cut(s) | 5, 32, 281 |
| Bsp119I | TTCGAA | 1 cut(s) | 198 |
| Bsp143I | GATC | 1 cut(s) | 453 |
| Bsp68I | TCGCGA | 1 cut(s) | 479 |
| BspACI | CCGC | 3 cut(s) | 24, 107, 278 |
| BspANI | GGCC | 3 cut(s) | 5, 32, 281 |
| BspCNI | CTCAG | 4 cut(s) | 76, 222, 276, 463 |
| BspDI | ATCGAT | 1 cut(s) | 452 |
| BspFNI | CGCG | 1 cut(s) | 479 |
| BspLI | GGNNCC | 2 cut(s) | 123, 435 |
| BspT104I | TTCGAA | 1 cut(s) | 198 |
| BsrFI | RCCGGY | 1 cut(s) | 295 |
| BssAI | RCCGGY | 1 cut(s) | 295 |
| BssECI | CCNNGG | 1 cut(s) | 429 |
| BssMI | GATC | 1 cut(s) | 453 |
| BssT1I | CCWWGG | 1 cut(s) | 429 |
| Bst2UI | CCWGG | 1 cut(s) | 344 |
| Bst4CI | ACNGT | 2 cut(s) | 274, 329 |
| BstBI | TTCGAA | 1 cut(s) | 198 |
| BstC8I | GCNNGC | 2 cut(s) | 105, 297 |
| BstDEI | CTNAG | 4 cut(s) | 84, 209, 284, 471 |
| BstF5I | GGATG | 4 cut(s) | 75, 226, 236, 352 |
| BstFNI | CGCG | 1 cut(s) | 479 |
| BstHHI | GCGC | 1 cut(s) | 508 |
| BstKTI | GATC | 1 cut(s) | 456 |
| BstMBI | GATC | 1 cut(s) | 453 |
| BstMCI | CGRYCG | 1 cut(s) | 456 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 503 |
| BstNI | CCWGG | 1 cut(s) | 344 |
| BstSCI | CCNGG | 3 cut(s) | 256, 342, 389 |
| BstSFI | CTRYAG | 1 cut(s) | 15 |
| BstUI | CGCG | 1 cut(s) | 479 |
| BstV1I | GCAGC | 5 cut(s) | 22, 154, 162, 204, 361 |
| BstV2I | GAAGAC | 1 cut(s) | 451 |
| Bsu15I | ATCGAT | 1 cut(s) | 452 |
| BsuRI | GGCC | 3 cut(s) | 5, 32, 281 |
| BsuTUI | ATCGAT | 1 cut(s) | 452 |
| BtgZI | GCGATG | 1 cut(s) | 251 |
| BtrI | CACGTC | 1 cut(s) | 128 |
| BtsCI | GGATG | 4 cut(s) | 75, 226, 236, 352 |
| BtsIMutI | CAGTG | 1 cut(s) | 334 |
| BtuMI | TCGCGA | 1 cut(s) | 479 |
| Cac8I | GCNNGC | 2 cut(s) | 105, 297 |
| CfoI | GCGC | 1 cut(s) | 508 |
| Cfr10I | RCCGGY | 1 cut(s) | 295 |
| Cfr13I | GGNCC | 3 cut(s) | 4, 280, 340 |
| ClaI | ATCGAT | 1 cut(s) | 452 |
| Csp6I | GTAC | 1 cut(s) | 254 |
| CviAII | CATG | 3 cut(s) | 146, 154, 509 |
| CviQI | GTAC | 1 cut(s) | 254 |
| DdeI | CTNAG | 4 cut(s) | 84, 209, 284, 471 |
| DpnI | GATC | 1 cut(s) | 455 |
| DpnII | GATC | 1 cut(s) | 453 |
| Eco130I | CCWWGG | 1 cut(s) | 429 |
| Eco32I | GATATC | 1 cut(s) | 370 |
| Eco47I | GGWCC | 1 cut(s) | 340 |
| EcoRII | CCWGG | 1 cut(s) | 342 |
| EcoRV | GATATC | 1 cut(s) | 370 |
| EcoT14I | CCWWGG | 1 cut(s) | 429 |
| EcoT22I | ATGCAT | 1 cut(s) | 238 |
| ErhI | CCWWGG | 1 cut(s) | 429 |
| FaeI | CATG | 3 cut(s) | 149, 157, 512 |
| FaqI | GGGAC | 1 cut(s) | 259 |
| FatI | CATG | 3 cut(s) | 145, 153, 508 |
| FauNDI | CATATG | 2 cut(s) | 250, 490 |
| Fnu4HI | GCNGC | 6 cut(s) | 11, 143, 151, 193, 279, 375 |
| FokI | GGATG | 4 cut(s) | 62, 223, 233, 359 |
| Fsp4HI | GCNGC | 6 cut(s) | 11, 143, 151, 193, 279, 375 |
| GlaI | GCGC | 1 cut(s) | 507 |
| GluI | GCNGC | 6 cut(s) | 11, 143, 151, 193, 279, 375 |
| GsaI | CCCAGC | 1 cut(s) | 10 |
| HaeIII | GGCC | 3 cut(s) | 5, 32, 281 |
| HapII | CCGG | 3 cut(s) | 257, 296, 390 |
| HhaI | GCGC | 1 cut(s) | 508 |
| Hin1II | CATG | 3 cut(s) | 149, 157, 512 |
| Hin6I | GCGC | 1 cut(s) | 506 |
| HinP1I | GCGC | 1 cut(s) | 506 |
| HincII | GTYRAC | 1 cut(s) | 131 |
| HindII | GTYRAC | 1 cut(s) | 131 |
| HinfI | GANTC | 4 cut(s) | 20, 157, 400, 514 |
| HpaII | CCGG | 3 cut(s) | 257, 296, 390 |
| HphI | GGTGA | 1 cut(s) | 454 |
| Hpy166II | GTNNAC | 1 cut(s) | 131 |
| Hpy188I | TCNGA | 1 cut(s) | 212 |
| Hpy188III | TCNNGA | 4 cut(s) | 55, 240, 478, 518 |
| Hpy8I | GTNNAC | 1 cut(s) | 131 |
| HpyCH4III | ACNGT | 2 cut(s) | 274, 329 |
| HpyCH4IV | ACGT | 1 cut(s) | 127 |
| HpyCH4V | TGCA | 2 cut(s) | 224, 236 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 503 |
| HpyF3I | CTNAG | 4 cut(s) | 84, 209, 284, 471 |
| HpySE526I | ACGT | 1 cut(s) | 127 |
| Hsp92II | CATG | 3 cut(s) | 149, 157, 512 |
| HspAI | GCGC | 1 cut(s) | 506 |
| KroI | GCCGGC | 1 cut(s) | 295 |
| KroNI | GCCGGC | 1 cut(s) | 297 |
| Kzo9I | GATC | 1 cut(s) | 453 |
| Lsp1109I | GCAGC | 5 cut(s) | 22, 154, 162, 204, 361 |
| LweI | GCATC | 3 cut(s) | 211, 245, 484 |
| MaeII | ACGT | 1 cut(s) | 127 |
| MalI | GATC | 1 cut(s) | 455 |
| MboI | GATC | 1 cut(s) | 453 |
| MboII | GAAGA | 5 cut(s) | 29, 241, 344, 409, 451 |
| MluCI | AATT | 2 cut(s) | 383, 423 |
| MlyI | GAGTC | 1 cut(s) | 29 |
| MnlI | CCTC | 4 cut(s) | 218, 236, 349, 387 |
| Mph1103I | ATGCAT | 1 cut(s) | 238 |
| MroNI | GCCGGC | 1 cut(s) | 295 |
| MseI | TTAA | 1 cut(s) | 386 |
| MslI | CAYNNNNRTG | 2 cut(s) | 185, 327 |
| MspA1I | CMGCKG | 1 cut(s) | 26 |
| MspI | CCGG | 3 cut(s) | 257, 296, 390 |
| MspR9I | CCNGG | 3 cut(s) | 258, 344, 391 |
| Mva1269I | GAATGC | 1 cut(s) | 238 |
| MvaI | CCWGG | 1 cut(s) | 344 |
| MvnI | CGCG | 1 cut(s) | 479 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 503 |
| NaeI | GCCGGC | 1 cut(s) | 297 |
| NciI | CCSGG | 2 cut(s) | 258, 391 |
| NdeI | CATATG | 2 cut(s) | 250, 490 |
| NdeII | GATC | 1 cut(s) | 453 |
| NgoMIV | GCCGGC | 1 cut(s) | 295 |
| NlaIII | CATG | 3 cut(s) | 149, 157, 512 |
| NlaIV | GGNNCC | 2 cut(s) | 123, 435 |
| NruI | TCGCGA | 1 cut(s) | 479 |
| NsiI | ATGCAT | 1 cut(s) | 238 |
| NspV | TTCGAA | 1 cut(s) | 198 |
| OliI | CACNNNNGTG | 1 cut(s) | 185 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 378 |
| PctI | GAATGC | 1 cut(s) | 238 |
| PdiI | GCCGGC | 1 cut(s) | 297 |
| PfeI | GAWTC | 3 cut(s) | 157, 400, 514 |
| PfoI | TCCNGGA | 1 cut(s) | 342 |
| PkrI | GCNGC | 6 cut(s) | 12, 144, 152, 194, 280, 376 |
| Ple19I | CGATCG | 1 cut(s) | 456 |
| PleI | GAGTC | 1 cut(s) | 28 |
| PpsI | GAGTC | 1 cut(s) | 28 |
| Psp6I | CCWGG | 1 cut(s) | 342 |
| PspFI | CCCAGC | 1 cut(s) | 6 |
| PspGI | CCWGG | 1 cut(s) | 342 |
| PspN4I | GGNNCC | 2 cut(s) | 123, 435 |
| PspPI | GGNCC | 3 cut(s) | 4, 280, 340 |
| PvuI | CGATCG | 1 cut(s) | 456 |
| RruI | TCGCGA | 1 cut(s) | 479 |
| RsaI | GTAC | 1 cut(s) | 255 |
| RsaNI | GTAC | 1 cut(s) | 254 |
| RseI | CAYNNNNRTG | 2 cut(s) | 185, 327 |
| SaqAI | TTAA | 1 cut(s) | 386 |
| SatI | GCNGC | 6 cut(s) | 11, 143, 151, 193, 279, 375 |
| Sau3AI | GATC | 1 cut(s) | 453 |
| Sau96I | GGNCC | 3 cut(s) | 4, 280, 340 |
| SchI | GAGTC | 1 cut(s) | 29 |
| ScrFI | CCNGG | 3 cut(s) | 258, 344, 391 |
| SetI | ASST | 9 cut(s) | 69, 105, 130, 197, 290, 305, 439, 447, 472 |
| SfaNI | GCATC | 3 cut(s) | 211, 245, 484 |
| SfcI | CTRYAG | 1 cut(s) | 15 |
| SfuI | TTCGAA | 1 cut(s) | 198 |
| SinI | GGWCC | 1 cut(s) | 340 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 185, 327 |
| Sse9I | AATT | 2 cut(s) | 383, 423 |
| SsiI | CCGC | 3 cut(s) | 24, 107, 278 |
| StyD4I | CCNGG | 3 cut(s) | 256, 342, 389 |
| StyI | CCWWGG | 1 cut(s) | 429 |
| TaaI | ACNGT | 2 cut(s) | 274, 329 |
| TaiI | ACGT | 1 cut(s) | 130 |
| TaqI | TCGA | 2 cut(s) | 198, 452 |
| TasI | AATT | 2 cut(s) | 383, 423 |
| TauI | GCSGC | 1 cut(s) | 281 |
| TfiI | GAWTC | 3 cut(s) | 157, 400, 514 |
| Tru1I | TTAA | 1 cut(s) | 386 |
| Tru9I | TTAA | 1 cut(s) | 386 |
| TscAI | CASTG | 1 cut(s) | 334 |
| TseI | GCWGC | 5 cut(s) | 10, 142, 150, 192, 374 |
| TspGWI | ACGGA | 1 cut(s) | 233 |
| TspRI | CASTG | 1 cut(s) | 334 |
| VpaK11BI | GGWCC | 1 cut(s) | 340 |
| XapI | RAATTY | 1 cut(s) | 423 |
| Zsp2I | ATGCAT | 1 cut(s) | 238 |