Rmu_sc0002383.1_g000011

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002383.1
OG0000057
Physical Location & Seq
Forward (+)
34917 .. 36784
1868 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002383.1_g000011.1.cds

Sequence Viewer

Length: 1494 bp
atgtcaacttctcagggtgagaatcgctcggccgcaactgaaggtcagagcgtcgacactaatcaggccagcgagcctgtcaatccctccactgtagtgggggctgaagaggaagaggctttcgtttcgaagcctatcccggaaggagcaaccatcgatgagactatcgcgatccttatggagaatgtcgagaaccatcgcaagaagatggacgcggatctcgccagggaaactgcaaaatcagaaaggctcctccgcgagttcgagcagcacatgactctctatgtggagaataccaggcagcaggtcacacagacagagggcgccttgaaggcgcaagctataactattgctgccgcacaagatgagcgtcaaaagacaattttgaacgctatagcggatcattccaaacaaaccgcatcaaacatagcagatctccgcaaggatggggccaacttggcaactgaagtggctatgcagagagccgaattgaaccatgcgaaggaggtgatgcactcggctttaggcgatcctaatactatccttggctctcttgcccagccgtccagttcgggcaagtatgtgcccccaaatcagcccgaaaaggccaacccaaacgttggttcttcgtcggctactgttgctgctactccatcaaagaacaaggagcaggccttggttattcctggcagcaaggaaaagactgcttcatcaagtggacagaccgccaagaaacaccaagtcgagaggggtgcaaggactgcgtcagagcctgtgacttttgtccagtacgacagcgacggagcagaagtggtgtatcaagagttgccgggaagctattatgcactcgaccaaactggtatcccgatcaagataaccgctctgtcaaaggaagagattacccctgcagtgactctccagcagcaagctactacccgcattgtgcaggttggggaaggatcaacgatggtaaatcaaacaacccctggacaaactgttcaccgagctgcggtgatacctcctccacctccgggcccagaatatgtgagatgtgaggaggttgaggagatgatcagattggcaaaccctagggcccagctagatggagtgtacgagggacctttcccgccaaacatcatgctcgcacctttccctcgaggcctggagccccgacaaagaaagaaacagcatggcagcatgatacagtcgatgggagaactcatcacggaggtaggcagttttgagcatctccttcgagagacagatgcaaggaaaaatgcttctaaaggaacgtacgtgcctggtaaacaccgtatggtagcggccctgagttaccagccaaccacttatgacccttactatcatcacgttactggagaagcgagccaggacgatgaagaggacgaggataatgatatagcagcctacgaactgactgggaagaaaagctcgtctttgaaacagttgaagatttccaaggagcctcgcttctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

497

Amino Acids

54.06

Weight (kDa)

5.35

Isoelectric Point (pI)

41.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1155
Acc36I ACCTGC 2 cut(s) 295, 937
AccB1I GGYRCC 1 cut(s) 323
AccB7I CCANNNNNTGG 1 cut(s) 620
AccBSI CCGCTC 1 cut(s) 881
AccI GTMKAC 1 cut(s) 54
AccII CGCG 3 cut(s) 170, 215, 258
AclI AACGTT 1 cut(s) 618
AclWI GGATC 5 cut(s) 166, 225, 408, 524, 967
AcoI YGGCCR 1 cut(s) 30
AcuI CTGAAG 3 cut(s) 60, 126, 486
AcyI GRCGYC 1 cut(s) 324
AfaI GTAC 3 cut(s) 791, 1112, 1295
AfiI CCNNNNNNNGG 4 cut(s) 502, 620, 1009, 1031
AgsI TTSAA 5 cut(s) 331, 388, 493, 1459, 1468
AjnI CCWGG 7 cut(s) 224, 296, 685, 985, 1161, 1300, 1386
AjuI GAANNNNNNNTTGG 2 cut(s) 607, 639
AleI CACNNNNGTG 1 cut(s) 95
AloI GAACNNNNNNTCC 2 cut(s) 981, 1013
AluBI AGCT 6 cut(s) 341, 837, 929, 1007, 1099, 1449
AluI AGCT 6 cut(s) 341, 837, 929, 1007, 1099, 1449
Alw26I GTCTC 2 cut(s) 155, 1253
AlwI GGATC 5 cut(s) 166, 225, 408, 524, 967
AlwNI CAGNNNCTG 1 cut(s) 773
Ama87I CYCGRG 1 cut(s) 1155
AoxI GGCC 9 cut(s) 30, 66, 450, 606, 672, 1033, 1092, 1159, 1323
ApaI GGGCCC 2 cut(s) 1037, 1096
ApeKI GCWGC 9 cut(s) 268, 301, 353, 644, 690, 922, 1007, 1194, 1421
AspA2I CCTAGG 1 cut(s) 1088
AspLEI GCGC 2 cut(s) 326, 337
AspS9I GGNCC 7 cut(s) 450, 1033, 1034, 1092, 1093, 1118, 1324
AsuC2I CCSGG 3 cut(s) 140, 831, 1032
AsuHPI GGTGA 4 cut(s) 29, 520, 992, 1024
AsuII TTCGAA 1 cut(s) 128
AvaI CYCGRG 1 cut(s) 1155
AvaII GGWCC 1 cut(s) 1118
AvrII CCTAGG 1 cut(s) 1088
BaeGI GKGCMC 3 cut(s) 588, 1037, 1096
BanI GGYRCC 1 cut(s) 323
BanII GRGCYC 3 cut(s) 1037, 1096, 1170
BbvI GCAGC 9 cut(s) 280, 313, 340, 631, 702, 934, 994, 1206, 1433
BccI CCATC 8 cut(s) 161, 202, 204, 440, 661, 961, 1097, 1204
BceAI ACGGC 1 cut(s) 547
BcgI CGANNNNNNTGC 4 cut(s) 734, 768, 1235, 1269
BciT130I CCWGG 7 cut(s) 226, 298, 687, 987, 1163, 1302, 1388
BciVI GTATCC 1 cut(s) 872
BclI TGATCA 1 cut(s) 1071
BcnI CCSGG 3 cut(s) 140, 831, 1032
BcoDI GTCTC 2 cut(s) 155, 1253
BfaI CTAG 2 cut(s) 1089, 1100
BfmI CTRYAG 3 cut(s) 93, 393, 906
BfoI RGCGCY 1 cut(s) 327
BfuAI ACCTGC 2 cut(s) 295, 937
BfuI GTATCC 1 cut(s) 872
BglI GCCNNNNNGGC 2 cut(s) 332, 458
BglII AGATCT 1 cut(s) 433
BlnI CCTAGG 1 cut(s) 1088
Bme18I GGWCC 1 cut(s) 1118
BmeT110I CYCGRG 1 cut(s) 1155
BmgT120I GGNCC 7 cut(s) 450, 1033, 1034, 1092, 1093, 1118, 1324
BmiI GGNNCC 8 cut(s) 251, 325, 451, 1035, 1094, 1119, 1167, 1482
BmrI ACTGGG 1 cut(s) 1446
BmsI GCATC 4 cut(s) 428, 501, 1255, 1255
BmuI ACTGGG 1 cut(s) 1446
BoxI GACNNNNGTC 1 cut(s) 782
BplI GAGNNNNNCTC 2 cut(s) 11, 43
BpmI CTGGAG 3 cut(s) 902, 1184, 1395
Bpu14I TTCGAA 1 cut(s) 128
BpuMI CCSGG 3 cut(s) 140, 831, 1032
Bsa29I ATCGAT 1 cut(s) 156
BsaAI YACGTR 1 cut(s) 1297
BsaHI GRCGYC 1 cut(s) 324
BsaJI CCNNGG 6 cut(s) 225, 544, 675, 985, 1088, 1476
BsaXI ACNNNNNCTCC 2 cut(s) 795, 825
Bsc4I CCNNNNNNNGG 4 cut(s) 502, 620, 1009, 1031
Bse1I ACTGG 5 cut(s) 567, 787, 862, 1378, 1441
BseBI CCWGG 7 cut(s) 226, 298, 687, 987, 1163, 1302, 1388
BseCI ATCGAT 1 cut(s) 156
BseDI CCNNGG 6 cut(s) 225, 544, 675, 985, 1088, 1476
BseGI GGATG 1 cut(s) 451
BseLI CCNNNNNNNGG 4 cut(s) 502, 620, 1009, 1031
BseMII CTCAG 2 cut(s) 26, 1319
BseNI ACTGG 5 cut(s) 567, 787, 862, 1378, 1441
BseRI GAGGAG 4 cut(s) 242, 1011, 1070, 1079
BseSI GKGCMC 3 cut(s) 588, 1037, 1096
BseX3I CGGCCG 1 cut(s) 30
BseXI GCAGC 9 cut(s) 280, 313, 340, 631, 702, 934, 994, 1206, 1433
BseYI CCCAGC 2 cut(s) 558, 1095
BsgI GTGCAG 1 cut(s) 965
Bsh1236I CGCG 3 cut(s) 170, 215, 258
Bsh1285I CGRYCG 1 cut(s) 33
BshFI GGCC 9 cut(s) 32, 68, 452, 608, 674, 1035, 1094, 1161, 1325
BshNI GGYRCC 1 cut(s) 323
BshVI ATCGAT 1 cut(s) 156
BsiEI CGRYCG 1 cut(s) 33
BsiHKCI CYCGRG 1 cut(s) 1155
BsiSI CCGG 3 cut(s) 140, 830, 1031
BsiWI CGTACG 1 cut(s) 1293
BslFI GGGAC 1 cut(s) 1131
BslI CCNNNNNNNGG 4 cut(s) 502, 620, 1009, 1031
BsmAI GTCTC 2 cut(s) 155, 1253
BsmFI GGGAC 1 cut(s) 1131
BsnI GGCC 9 cut(s) 32, 68, 452, 608, 674, 1035, 1094, 1161, 1325
BsoBI CYCGRG 1 cut(s) 1155
Bsp119I TTCGAA 1 cut(s) 128
Bsp120I GGGCCC 2 cut(s) 1033, 1092
Bsp1286I GDGCHC 4 cut(s) 588, 1037, 1096, 1170
Bsp143I GATC 8 cut(s) 171, 217, 400, 433, 529, 867, 959, 1071
Bsp68I TCGCGA 1 cut(s) 170
BspANI GGCC 9 cut(s) 32, 68, 452, 608, 674, 1035, 1094, 1161, 1325
BspCNI CTCAG 2 cut(s) 25, 1320
BspDI ATCGAT 1 cut(s) 156
BspFNI CGCG 3 cut(s) 170, 215, 258
BspLI GGNNCC 8 cut(s) 251, 325, 451, 1035, 1094, 1119, 1167, 1482
BspMAI CTGCAG 1 cut(s) 910
BspMI ACCTGC 2 cut(s) 295, 937
BspPI GGATC 5 cut(s) 166, 225, 408, 524, 967
BspT104I TTCGAA 1 cut(s) 128
BspT107I GGYRCC 1 cut(s) 323
BsrBI CCGCTC 1 cut(s) 881
BsrI ACTGG 5 cut(s) 567, 787, 862, 1378, 1441
BssECI CCNNGG 6 cut(s) 225, 544, 675, 985, 1088, 1476
BssMI GATC 8 cut(s) 171, 217, 400, 433, 529, 867, 959, 1071
BssNI GRCGYC 1 cut(s) 324
BssT1I CCWWGG 4 cut(s) 544, 675, 1088, 1476
Bst2UI CCWGG 7 cut(s) 226, 298, 687, 987, 1163, 1302, 1388
Bst4CI ACNGT 6 cut(s) 94, 640, 997, 1206, 1313, 1464
Bst6I CTCTTC 4 cut(s) 102, 108, 888, 1392
BstACI GRCGYC 1 cut(s) 324
BstAPI GCANNNNNTGC 1 cut(s) 761
BstBAI YACGTR 1 cut(s) 1297
BstBI TTCGAA 1 cut(s) 128
BstC8I GCNNGC 7 cut(s) 70, 74, 339, 672, 927, 1143, 1384
BstDEI CTNAG 2 cut(s) 12, 1328
BstF5I GGATG 1 cut(s) 451
BstFNI CGCG 3 cut(s) 170, 215, 258
BstH2I RGCGCY 1 cut(s) 327
BstHHI GCGC 2 cut(s) 326, 337
BstKTI GATC 8 cut(s) 174, 220, 403, 436, 532, 870, 962, 1074
BstMAI GTCTC 2 cut(s) 155, 1253
BstMBI GATC 8 cut(s) 171, 217, 400, 433, 529, 867, 959, 1071
BstMCI CGRYCG 1 cut(s) 33
BstMWI GCNNNNNNNGC 5 cut(s) 221, 332, 458, 641, 761
BstNI CCWGG 7 cut(s) 226, 298, 687, 987, 1163, 1302, 1388
BstPAI GACNNNNGTC 1 cut(s) 782
BstSFI CTRYAG 3 cut(s) 93, 393, 906
BstSLI GKGCMC 3 cut(s) 588, 1037, 1096
BstUI CGCG 3 cut(s) 170, 215, 258
BstV1I GCAGC 9 cut(s) 280, 313, 340, 631, 702, 934, 994, 1206, 1433
BstX2I RGATCY 2 cut(s) 217, 433
BstXI CCANNNNNNTGG 2 cut(s) 97, 1103
BstYI RGATCY 2 cut(s) 217, 433
BstZI CGGCCG 1 cut(s) 30
Bsu15I ATCGAT 1 cut(s) 156
BsuI GTATCC 1 cut(s) 872
BsuRI GGCC 9 cut(s) 32, 68, 452, 608, 674, 1035, 1094, 1161, 1325
BsuTUI ATCGAT 1 cut(s) 156
BtgZI GCGATG 1 cut(s) 182
BtsCI GGATG 1 cut(s) 451
BtsI GCAGTG 1 cut(s) 915
BtsIMutI CAGTG 2 cut(s) 90, 915
BtuMI TCGCGA 1 cut(s) 170
BveI ACCTGC 2 cut(s) 295, 937
Cac8I GCNNGC 7 cut(s) 70, 74, 339, 672, 927, 1143, 1384
CaiI CAGNNNCTG 1 cut(s) 773
CfoI GCGC 2 cut(s) 326, 337
Cfr13I GGNCC 7 cut(s) 450, 1033, 1034, 1092, 1093, 1118, 1324
ClaI ATCGAT 1 cut(s) 156
CseI GACGC 4 cut(s) 40, 221, 359, 753
Csp6I GTAC 3 cut(s) 790, 1111, 1294
CspCI CAANNNNNGTGG 2 cut(s) 450, 485
CviAII CATG 5 cut(s) 274, 497, 1138, 1190, 1198
CviQI GTAC 3 cut(s) 790, 1111, 1294
DdeI CTNAG 2 cut(s) 12, 1328
DinI GGCGCC 1 cut(s) 325
DpnI GATC 8 cut(s) 173, 219, 402, 435, 531, 869, 961, 1073
DpnII GATC 8 cut(s) 171, 217, 400, 433, 529, 867, 959, 1071
EaeI YGGCCR 1 cut(s) 30
EagI CGGCCG 1 cut(s) 30
Eam1104I CTCTTC 4 cut(s) 102, 108, 888, 1392
EarI CTCTTC 4 cut(s) 102, 108, 888, 1392
EclXI CGGCCG 1 cut(s) 30
Eco130I CCWWGG 4 cut(s) 544, 675, 1088, 1476
Eco147I AGGCCT 2 cut(s) 674, 1161
Eco24I GRGCYC 3 cut(s) 1037, 1096, 1170
Eco47I GGWCC 1 cut(s) 1118
Eco52I CGGCCG 1 cut(s) 30
Eco57I CTGAAG 3 cut(s) 60, 126, 486
Eco88I CYCGRG 1 cut(s) 1155
EcoO109I RGGNCCY 2 cut(s) 1092, 1118
EcoRII CCWGG 7 cut(s) 224, 296, 685, 985, 1161, 1300, 1386
EcoT14I CCWWGG 4 cut(s) 544, 675, 1088, 1476
EcoT38I GRGCYC 3 cut(s) 1037, 1096, 1170
EgeI GGCGCC 1 cut(s) 325
EheI GGCGCC 1 cut(s) 325
ErhI CCWWGG 4 cut(s) 544, 675, 1088, 1476
FaeI CATG 5 cut(s) 277, 500, 1141, 1193, 1201
FalI AAGNNNNNCTT 2 cut(s) 1438, 1470
FaqI GGGAC 1 cut(s) 1131
FatI CATG 5 cut(s) 273, 496, 1137, 1189, 1197
FauI CCCGC 2 cut(s) 944, 1134
FbaI TGATCA 1 cut(s) 1071
FblI GTMKAC 1 cut(s) 54
FokI GGATG 1 cut(s) 458
FriOI GRGCYC 3 cut(s) 1037, 1096, 1170
FspBI CTAG 2 cut(s) 1089, 1100
GlaI GCGC 2 cut(s) 325, 336
GsaI CCCAGC 2 cut(s) 562, 1099
GsuI CTGGAG 3 cut(s) 902, 1184, 1395
HaeII RGCGCY 1 cut(s) 327
HaeIII GGCC 9 cut(s) 32, 68, 452, 608, 674, 1035, 1094, 1161, 1325
HapII CCGG 3 cut(s) 140, 830, 1031
HgaI GACGC 4 cut(s) 40, 221, 359, 753
HhaI GCGC 2 cut(s) 326, 337
Hin1I GRCGYC 1 cut(s) 324
Hin1II CATG 5 cut(s) 277, 500, 1141, 1193, 1201
Hin6I GCGC 2 cut(s) 324, 335
HinP1I GCGC 2 cut(s) 324, 335
HincII GTYRAC 2 cut(s) 6, 55
HindII GTYRAC 2 cut(s) 6, 55
HinfI GANTC 3 cut(s) 22, 277, 913
HpaII CCGG 3 cut(s) 140, 830, 1031
HphI GGTGA 4 cut(s) 29, 520, 992, 1024
Hpy166II GTNNAC 6 cut(s) 6, 55, 719, 1000, 1111, 1307
Hpy188I TCNGA 4 cut(s) 48, 244, 769, 1076
Hpy188III TCNNGA 7 cut(s) 169, 190, 745, 821, 865, 871, 1256
Hpy8I GTNNAC 6 cut(s) 6, 55, 719, 1000, 1111, 1307
Hpy99I CGWCG 3 cut(s) 56, 634, 803
HpyAV CCTTC 6 cut(s) 35, 137, 325, 496, 950, 1262
HpyCH4III ACNGT 6 cut(s) 94, 640, 997, 1206, 1313, 1464
HpyCH4IV ACGT 4 cut(s) 618, 1292, 1296, 1368
HpyCH4V TGCA 8 cut(s) 236, 478, 514, 755, 845, 908, 946, 1268
HpyF10VI GCNNNNNNNGC 5 cut(s) 221, 332, 458, 641, 761
HpyF3I CTNAG 2 cut(s) 12, 1328
HpySE526I ACGT 4 cut(s) 618, 1292, 1296, 1368
Hsp92I GRCGYC 1 cut(s) 324
Hsp92II CATG 5 cut(s) 277, 500, 1141, 1193, 1201
HspAI GCGC 2 cut(s) 324, 335
KasI GGCGCC 1 cut(s) 323
Ksp22I TGATCA 1 cut(s) 1071
Kzo9I GATC 8 cut(s) 171, 217, 400, 433, 529, 867, 959, 1071
LmnI GCTCC 6 cut(s) 146, 255, 667, 803, 1165, 1480
Lsp1109I GCAGC 9 cut(s) 280, 313, 340, 631, 702, 934, 994, 1206, 1433
LweI GCATC 4 cut(s) 428, 501, 1255, 1255
MaeI CTAG 2 cut(s) 1089, 1100
MaeII ACGT 4 cut(s) 618, 1292, 1296, 1368
MaeIII GTNAC 5 cut(s) 307, 775, 910, 1331, 1369
MalI GATC 8 cut(s) 173, 219, 402, 435, 531, 869, 961, 1073
MbiI CCGCTC 1 cut(s) 881
MboI GATC 8 cut(s) 171, 217, 400, 433, 529, 867, 959, 1071
MboII GAAGA 8 cut(s) 119, 125, 217, 618, 905, 1409, 1453, 1480
MflI RGATCY 2 cut(s) 217, 433
MhlI GDGCHC 4 cut(s) 588, 1037, 1096, 1170
MluCI AATT 2 cut(s) 381, 488
Mly113I GGCGCC 1 cut(s) 324
MlyI GAGTC 2 cut(s) 271, 907
MslI CAYNNNNRTG 1 cut(s) 95
MspI CCGG 3 cut(s) 140, 830, 1031
MvaI CCWGG 7 cut(s) 226, 298, 687, 987, 1163, 1302, 1388
MvnI CGCG 3 cut(s) 170, 215, 258
MwoI GCNNNNNNNGC 5 cut(s) 221, 332, 458, 641, 761
NarI GGCGCC 1 cut(s) 324
NciI CCSGG 3 cut(s) 140, 831, 1032
NdeII GATC 8 cut(s) 171, 217, 400, 433, 529, 867, 959, 1071
NlaIII CATG 5 cut(s) 277, 500, 1141, 1193, 1201
NlaIV GGNNCC 8 cut(s) 251, 325, 451, 1035, 1094, 1119, 1167, 1482
NmeAIII GCCGAG 2 cut(s) 8, 497
NmuCI GTSAC 3 cut(s) 307, 775, 910
NruI TCGCGA 1 cut(s) 170
NspV TTCGAA 1 cut(s) 128
OliI CACNNNNGTG 1 cut(s) 95
PaeR7I CTCGAG 1 cut(s) 1155
PceI AGGCCT 2 cut(s) 674, 1161
PfeI GAWTC 1 cut(s) 22
Pfl23II CGTACG 1 cut(s) 1293
PflFI GACNNNGTC 1 cut(s) 763
PflMI CCANNNNNTGG 1 cut(s) 620
PfoI TCCNGGA 1 cut(s) 138
PleI GAGTC 2 cut(s) 271, 907
PluTI GGCGCC 1 cut(s) 327
PpsI GAGTC 2 cut(s) 271, 907
Ppu21I YACGTR 1 cut(s) 1297
PpuMI RGGWCCY 1 cut(s) 1118
PshAI GACNNNNGTC 1 cut(s) 782
Psp1406I AACGTT 1 cut(s) 618
Psp5II RGGWCCY 1 cut(s) 1118
Psp6I CCWGG 7 cut(s) 224, 296, 685, 985, 1161, 1300, 1386
PspFI CCCAGC 2 cut(s) 558, 1095
PspGI CCWGG 7 cut(s) 224, 296, 685, 985, 1161, 1300, 1386
PspLI CGTACG 1 cut(s) 1293
PspN4I GGNNCC 8 cut(s) 251, 325, 451, 1035, 1094, 1119, 1167, 1482
PspOMI GGGCCC 2 cut(s) 1033, 1092
PspPI GGNCC 7 cut(s) 450, 1033, 1034, 1092, 1093, 1118, 1324
PspPPI RGGWCCY 1 cut(s) 1118
PspXI VCTCGAGB 1 cut(s) 1155
PstI CTGCAG 1 cut(s) 910
PstNI CAGNNNCTG 1 cut(s) 773
PsuI RGATCY 2 cut(s) 217, 433
PsyI GACNNNGTC 1 cut(s) 763
RruI TCGCGA 1 cut(s) 170
RsaI GTAC 3 cut(s) 791, 1112, 1295
RsaNI GTAC 3 cut(s) 790, 1111, 1294
RseI CAYNNNNRTG 1 cut(s) 95
SalI GTCGAC 1 cut(s) 53
Sau3AI GATC 8 cut(s) 171, 217, 400, 433, 529, 867, 959, 1071
Sau96I GGNCC 7 cut(s) 450, 1033, 1034, 1092, 1093, 1118, 1324
SchI GAGTC 2 cut(s) 271, 907
SduI GDGCHC 4 cut(s) 588, 1037, 1096, 1170
SfaNI GCATC 4 cut(s) 428, 501, 1255, 1255
SfcI CTRYAG 3 cut(s) 93, 393, 906
SfoI GGCGCC 1 cut(s) 325
Sfr274I CTCGAG 1 cut(s) 1155
SfuI TTCGAA 1 cut(s) 128
SinI GGWCC 1 cut(s) 1118
SlaI CTCGAG 1 cut(s) 1155
SmiMI CAYNNNNRTG 1 cut(s) 95
SmlI CTYRAG 1 cut(s) 1155
SmoI CTYRAG 1 cut(s) 1155
Sse9I AATT 2 cut(s) 381, 488
SseBI AGGCCT 2 cut(s) 674, 1161
SspDI GGCGCC 1 cut(s) 323
SspMI CTAG 2 cut(s) 1089, 1100
StuI AGGCCT 2 cut(s) 674, 1161
StyI CCWWGG 4 cut(s) 544, 675, 1088, 1476
TaaI ACNGT 6 cut(s) 94, 640, 997, 1206, 1313, 1464
TaiI ACGT 4 cut(s) 621, 1295, 1299, 1371
TasI AATT 2 cut(s) 381, 488
TauI GCSGC 3 cut(s) 35, 359, 1325
TfiI GAWTC 1 cut(s) 22
TscAI CASTG 2 cut(s) 97, 915
TseFI GTSAC 3 cut(s) 307, 775, 910
TseI GCWGC 9 cut(s) 268, 301, 353, 644, 690, 922, 1007, 1194, 1421
Tsp45I GTSAC 3 cut(s) 307, 775, 910
TspDTI ATGAA 2 cut(s) 699, 1410
TspGWI ACGGA 2 cut(s) 816, 1241
TspRI CASTG 2 cut(s) 97, 915
Tth111I GACNNNGTC 1 cut(s) 763
Van91I CCANNNNNTGG 1 cut(s) 620
VpaK11BI GGWCC 1 cut(s) 1118
XhoI CTCGAG 1 cut(s) 1155
XmaJI CCTAGG 1 cut(s) 1088
XmiI GTMKAC 1 cut(s) 54
XspI CTAG 2 cut(s) 1089, 1100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.