Rmu_sc0002401.1_g000012

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002401.1
OG0000057
Physical Location & Seq
Reverse (-)
53264 .. 55300
2037 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002401.1_g000012.1.cds

Sequence Viewer

Length: 1599 bp
atggagtcaccaacatccccaaaggattccaacttgttcaagaaattgaaagcggccgcagcagaacagagccaagagggaaagactagggacaaacacaaagatatcctaaccaagccatacattccgccttcttcaacctccttcatcaaagagggcaagtggtacaccagggagaaagggaaggcggtagagatcagcccttctaagaaaaggaagctacaacgcaggtttggggaggccaagcaaaaactacaggctctggatcaaagactgatcaagccttcgcaattggtcaaatctcctgaacaatatcaaaaggaaatggaggcgctagcggctaagccattgatggctcccaacagctttcaaaagcaagtaaactcagagacacggacatctaagcccagtgttttctgcaggatcactaaggaaaggacaccaccaccagctaagaaagagagcttgcccactatacaggcacgtgtcatgtgcaggttgtttcgcgaggaacttgagaccaagtcttcaatctttgagagactggggggtaaggacaagccttcaaataccttgcaatggaaacctaagaaagttcaaagtctggtggtcgcgccctctaagcaggtcctagcagataaaccagaaccggacccaccaaggcaagtggacacgataacagaacacggacaaaagcaaaagccccccctcgtggatgaatcattggtagctctggtggctaggcagttcaacactgacatactagtcgatgaacccaagcttaaccttgaagacgacatggatgaaacagaagtgattacctcagcagcaacaatacctattgaagaggtggtgttcctcgaaactgaggacgccaatagcaaggaattcttcatgagctttacgagacccacacctgctatggttcagcacatgcggcctttgtatatcacggaggaaatcggcagcaccaaagattggattcaccggagctattgtgttccgtccactctccaccaggaactgattatgtggaacagggttactgataaggctgatcctcgcccgttccatgtgtctgcgaattatgtagatgtcaggtactacttggagccaatcgctccattgcaaatcagtggcattgacaataatggccaccccacagtggtgacggcctctgaattagcacagtgggggttcacgctcgcaaaggaagacctggtaaggctcggccatgctgtgcccaatactttggaggcctatgatcgagtcgtgaccttagaaataatcattgaggaattatctgaccatgaagaggaagaagaagaaatccagctcgcctcagcagcattggatgacacaccttcgaaggttagggaccctaccgaaaaggtcaatctgggaacaactgatgagcccatggaagtggttatcagcacctatttagagcctagcgagaaacagaggctcatagacttattgctggaaaaaaaaatacgaagatatgcctggcctgtcactagacttggtatgccatcggctgccaacactccccgacaagaggcctgtgaagcaagagccgcgaagaatgaactctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

532

Amino Acids

60.37

Weight (kDa)

6.12

Isoelectric Point (pI)

48.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 925
AasI GACNNNNNNGTC 1 cut(s) 764
Acc36I ACCTGC 4 cut(s) 219, 486, 616, 925
AccB7I CCANNNNNTGG 1 cut(s) 978
AccII CGCG 3 cut(s) 507, 614, 1583
AciI CCGC 7 cut(s) 53, 57, 128, 188, 338, 937, 1581
AclWI GGATC 3 cut(s) 273, 431, 1052
AcoI YGGCCR 3 cut(s) 54, 1153, 1231
AcsI RAATTY 1 cut(s) 887
AcvI CACGTG 1 cut(s) 485
AcyI GRCGYC 1 cut(s) 873
AfaI GTAC 2 cut(s) 167, 1103
AfiI CCNNNNNNNGG 6 cut(s) 579, 712, 978, 1165, 1315, 1561
AflIII ACRYGT 1 cut(s) 484
AhlI ACTAGT 1 cut(s) 763
AjnI CCWGG 4 cut(s) 170, 1017, 1218, 1508
AleI CACNNNNGTG 1 cut(s) 1166
AluBI AGCT 9 cut(s) 220, 366, 452, 465, 731, 781, 900, 993, 1336
AluI AGCT 9 cut(s) 220, 366, 452, 465, 731, 781, 900, 993, 1336
Alw26I GTCTC 4 cut(s) 383, 512, 535, 901
AlwI GGATC 3 cut(s) 273, 431, 1052
AlwNI CAGNNNCTG 2 cut(s) 262, 1024
AoxI GGCC 9 cut(s) 54, 240, 938, 1153, 1173, 1231, 1257, 1511, 1563
ApeKI GCWGC 5 cut(s) 59, 827, 966, 1346, 1541
ApoI RAATTY 1 cut(s) 887
AspLEI GCGC 2 cut(s) 334, 616
AspS9I GGNCC 3 cut(s) 628, 652, 1378
AsuHPI GGTGA 2 cut(s) 977, 1180
AsuII TTCGAA 1 cut(s) 1367
AsuNHI GCTAGC 1 cut(s) 334
AvaII GGWCC 3 cut(s) 628, 652, 1378
BaeGI GKGCMC 1 cut(s) 1245
BalI TGGCCA 1 cut(s) 1155
BanII GRGCYC 1 cut(s) 1419
BauI CACGAG 1 cut(s) 710
BbrPI CACGTG 1 cut(s) 485
BbsI GAAGAC 3 cut(s) 519, 798, 1221
BbvCI CCTCAGC 2 cut(s) 823, 1342
BbvI GCAGC 5 cut(s) 71, 839, 978, 1358, 1528
BccI CCATC 2 cut(s) 346, 1543
BceAI ACGGC 1 cut(s) 1188
BciT130I CCWGG 4 cut(s) 172, 1019, 1220, 1510
BclI TGATCA 1 cut(s) 276
BcoDI GTCTC 4 cut(s) 383, 512, 535, 901
BcuI ACTAGT 1 cut(s) 763
BfaI CTAG 7 cut(s) 87, 335, 632, 741, 764, 1452, 1521
BfmI CTRYAG 2 cut(s) 254, 418
BfoI RGCGCY 1 cut(s) 335
BfuAI ACCTGC 4 cut(s) 219, 486, 616, 925
BlpI GCTNAGC 1 cut(s) 342
Bme1390I CCNGG 4 cut(s) 172, 1019, 1220, 1510
Bme18I GGWCC 3 cut(s) 628, 652, 1378
BmgT120I GGNCC 3 cut(s) 628, 652, 1378
BmiI GGNNCC 5 cut(s) 357, 654, 1113, 1379, 1380
BmrFI CCNGG 4 cut(s) 172, 1019, 1220, 1510
BmrI ACTGGG 2 cut(s) 402, 554
BmtI GCTAGC 1 cut(s) 338
BmuI ACTGGG 2 cut(s) 402, 554
BpiI GAAGAC 3 cut(s) 519, 798, 1221
Bpu10I CCTNAGC 2 cut(s) 823, 1342
Bpu1102I GCTNAGC 1 cut(s) 342
Bpu14I TTCGAA 1 cut(s) 1367
BpuEI CTTGAG 1 cut(s) 536
BsaAI YACGTR 1 cut(s) 485
BsaHI GRCGYC 1 cut(s) 873
BsaI GGTCTC 2 cut(s) 512, 901
BsaJI CCNNGG 3 cut(s) 171, 659, 1419
BsaWI WCCGGW 2 cut(s) 649, 987
BsaXI ACNNNNNCTCC 2 cut(s) 982, 1012
Bsc4I CCNNNNNNNGG 6 cut(s) 579, 712, 978, 1165, 1315, 1561
Bse1I ACTGG 2 cut(s) 408, 549
Bse3DI GCAATG 2 cut(s) 584, 1124
BseBI CCWGG 4 cut(s) 172, 1019, 1220, 1510
BseDI CCNNGG 3 cut(s) 171, 659, 1419
BseGI GGATG 4 cut(s) 14, 721, 808, 1360
BseLI CCNNNNNNNGG 6 cut(s) 579, 712, 978, 1165, 1315, 1561
BseMI GCAATG 2 cut(s) 584, 1124
BseMII CTCAG 4 cut(s) 399, 837, 858, 1356
BseNI ACTGG 2 cut(s) 408, 549
BseSI GKGCMC 1 cut(s) 1245
BseX3I CGGCCG 1 cut(s) 54
BseXI GCAGC 5 cut(s) 71, 839, 978, 1358, 1528
BsgI GTGCAG 1 cut(s) 514
Bsh1236I CGCG 3 cut(s) 507, 614, 1583
Bsh1285I CGRYCG 1 cut(s) 57
BshFI GGCC 9 cut(s) 56, 242, 940, 1155, 1175, 1233, 1259, 1513, 1565
BsiEI CGRYCG 1 cut(s) 57
BsiSI CCGG 2 cut(s) 650, 988
BslFI GGGAC 2 cut(s) 104, 1391
BslI CCNNNNNNNGG 6 cut(s) 579, 712, 978, 1165, 1315, 1561
BsmAI GTCTC 4 cut(s) 383, 512, 535, 901
BsmFI GGGAC 2 cut(s) 104, 1391
BsnI GGCC 9 cut(s) 56, 242, 940, 1155, 1175, 1233, 1259, 1513, 1565
Bso31I GGTCTC 2 cut(s) 512, 901
Bsp119I TTCGAA 1 cut(s) 1367
Bsp1286I GDGCHC 2 cut(s) 1245, 1419
Bsp143I GATC 6 cut(s) 195, 265, 276, 423, 1057, 1264
Bsp1720I GCTNAGC 1 cut(s) 342
Bsp19I CCATGG 1 cut(s) 1419
Bsp68I TCGCGA 1 cut(s) 507
BspACI CCGC 7 cut(s) 53, 57, 128, 188, 338, 937, 1581
BspANI GGCC 9 cut(s) 56, 242, 940, 1155, 1175, 1233, 1259, 1513, 1565
BspCNI CTCAG 4 cut(s) 398, 836, 859, 1355
BspFNI CGCG 3 cut(s) 507, 614, 1583
BspHI TCATGA 1 cut(s) 894
BspLI GGNNCC 5 cut(s) 357, 654, 1113, 1379, 1380
BspMAI CTGCAG 1 cut(s) 422
BspMI ACCTGC 4 cut(s) 219, 486, 616, 925
BspOI GCTAGC 1 cut(s) 338
BspPI GGATC 3 cut(s) 273, 431, 1052
BspT104I TTCGAA 1 cut(s) 1367
BspTNI GGTCTC 2 cut(s) 512, 901
BsrDI GCAATG 2 cut(s) 584, 1124
BsrI ACTGG 2 cut(s) 408, 549
BssECI CCNNGG 3 cut(s) 171, 659, 1419
BssMI GATC 6 cut(s) 195, 265, 276, 423, 1057, 1264
BssNI GRCGYC 1 cut(s) 873
BssSI CACGAG 1 cut(s) 710
BssT1I CCWWGG 2 cut(s) 659, 1419
Bst2BI CACGAG 1 cut(s) 710
Bst2UI CCWGG 4 cut(s) 172, 1019, 1220, 1510
Bst4CI ACNGT 2 cut(s) 1165, 1191
Bst6I CTCTTC 2 cut(s) 840, 1308
BstACI GRCGYC 1 cut(s) 873
BstBAI YACGTR 1 cut(s) 485
BstBI TTCGAA 1 cut(s) 1367
BstC8I GCNNGC 4 cut(s) 336, 467, 1206, 1338
BstDSI CCRYGG 1 cut(s) 1419
BstF5I GGATG 4 cut(s) 14, 721, 808, 1360
BstFNI CGCG 3 cut(s) 507, 614, 1583
BstH2I RGCGCY 1 cut(s) 335
BstHHI GCGC 2 cut(s) 334, 616
BstKTI GATC 6 cut(s) 198, 268, 279, 426, 1060, 1267
BstMAI GTCTC 4 cut(s) 383, 512, 535, 901
BstMBI GATC 6 cut(s) 195, 265, 276, 423, 1057, 1264
BstMCI CGRYCG 1 cut(s) 57
BstMWI GCNNNNNNNGC 8 cut(s) 59, 338, 622, 737, 937, 1346, 1571, 1580
BstNI CCWGG 4 cut(s) 172, 1019, 1220, 1510
BstNSI RCATGY 1 cut(s) 937
BstSCI CCNGG 4 cut(s) 170, 1017, 1218, 1508
BstSFI CTRYAG 2 cut(s) 254, 418
BstSLI GKGCMC 1 cut(s) 1245
BstUI CGCG 3 cut(s) 507, 614, 1583
BstV1I GCAGC 5 cut(s) 71, 839, 978, 1358, 1528
BstV2I GAAGAC 3 cut(s) 519, 798, 1221
BstXI CCANNNNNNTGG 2 cut(s) 1252, 1426
BstZI CGGCCG 1 cut(s) 54
BsuRI GGCC 9 cut(s) 56, 242, 940, 1155, 1175, 1233, 1259, 1513, 1565
BtgI CCRYGG 1 cut(s) 1419
BtsCI GGATG 4 cut(s) 14, 721, 808, 1360
BtsIMutI CAGTG 5 cut(s) 415, 753, 1141, 1170, 1196
BtuMI TCGCGA 1 cut(s) 507
BveI ACCTGC 4 cut(s) 219, 486, 616, 925
Cac8I GCNNGC 4 cut(s) 336, 467, 1206, 1338
CaiI CAGNNNCTG 2 cut(s) 262, 1024
CciI TCATGA 1 cut(s) 894
CciNI GCGGCCGC 1 cut(s) 54
CfoI GCGC 2 cut(s) 334, 616
Cfr13I GGNCC 3 cut(s) 628, 652, 1378
CseI GACGC 1 cut(s) 881
CsiI ACCWGGT 1 cut(s) 1218
Csp6I GTAC 2 cut(s) 166, 1102
CspCI CAANNNNNGTGG 2 cut(s) 648, 683
CviAII CATG 8 cut(s) 490, 799, 895, 934, 1073, 1235, 1310, 1420
CviQI GTAC 2 cut(s) 166, 1102
DpnI GATC 6 cut(s) 197, 267, 278, 425, 1059, 1266
DpnII GATC 6 cut(s) 195, 265, 276, 423, 1057, 1264
DrdI GACNNNNNNGTC 1 cut(s) 764
DseDI GACNNNNNNGTC 1 cut(s) 764
EaeI YGGCCR 3 cut(s) 54, 1153, 1231
EagI CGGCCG 1 cut(s) 54
Eam1104I CTCTTC 2 cut(s) 840, 1308
EarI CTCTTC 2 cut(s) 840, 1308
EciI GGCGGA 1 cut(s) 117
EclXI CGGCCG 1 cut(s) 54
Eco130I CCWWGG 2 cut(s) 659, 1419
Eco147I AGGCCT 2 cut(s) 1259, 1565
Eco24I GRGCYC 1 cut(s) 1419
Eco31I GGTCTC 2 cut(s) 512, 901
Eco32I GATATC 1 cut(s) 106
Eco47I GGWCC 3 cut(s) 628, 652, 1378
Eco52I CGGCCG 1 cut(s) 54
Eco72I CACGTG 1 cut(s) 485
EcoO109I RGGNCCY 2 cut(s) 628, 1378
EcoRI GAATTC 1 cut(s) 887
EcoRII CCWGG 4 cut(s) 170, 1017, 1218, 1508
EcoRV GATATC 1 cut(s) 106
EcoT14I CCWWGG 2 cut(s) 659, 1419
EcoT38I GRGCYC 1 cut(s) 1419
ErhI CCWWGG 2 cut(s) 659, 1419
FaeI CATG 8 cut(s) 493, 802, 898, 937, 1076, 1238, 1313, 1423
FalI AAGNNNNNCTT 2 cut(s) 875, 907
FaqI GGGAC 2 cut(s) 104, 1391
FatI CATG 8 cut(s) 489, 798, 894, 933, 1072, 1234, 1309, 1419
FbaI TGATCA 1 cut(s) 276
FokI GGATG 3 cut(s) 728, 815, 1367
FriOI GRGCYC 1 cut(s) 1419
FspBI CTAG 7 cut(s) 87, 335, 632, 741, 764, 1452, 1521
GlaI GCGC 2 cut(s) 333, 615
HaeII RGCGCY 1 cut(s) 335
HaeIII GGCC 9 cut(s) 56, 242, 940, 1155, 1175, 1233, 1259, 1513, 1565
HapII CCGG 2 cut(s) 650, 988
HgaI GACGC 1 cut(s) 881
HhaI GCGC 2 cut(s) 334, 616
Hin1I GRCGYC 1 cut(s) 873
Hin1II CATG 8 cut(s) 493, 802, 898, 937, 1076, 1238, 1313, 1423
Hin6I GCGC 2 cut(s) 332, 614
HinP1I GCGC 2 cut(s) 332, 614
HindIII AAGCTT 1 cut(s) 779
HinfI GANTC 5 cut(s) 5, 26, 719, 982, 1269
HpaII CCGG 2 cut(s) 650, 988
HphI GGTGA 2 cut(s) 977, 1180
Hpy166II GTNNAC 5 cut(s) 168, 382, 670, 1008, 1200
Hpy188I TCNGA 4 cut(s) 388, 1180, 1306, 1598
Hpy188III TCNNGA 6 cut(s) 40, 263, 305, 506, 895, 1273
Hpy8I GTNNAC 5 cut(s) 168, 382, 670, 1008, 1200
HpyAV CCTTC 8 cut(s) 141, 154, 178, 213, 294, 573, 1363, 1374
HpyCH4III ACNGT 2 cut(s) 1165, 1191
HpyCH4IV ACGT 1 cut(s) 484
HpyCH4V TGCA 4 cut(s) 420, 495, 577, 1129
HpyF10VI GCNNNNNNNGC 8 cut(s) 59, 338, 622, 737, 937, 1346, 1571, 1580
HpySE526I ACGT 1 cut(s) 484
Hsp92I GRCGYC 1 cut(s) 873
Hsp92II CATG 8 cut(s) 493, 802, 898, 937, 1076, 1238, 1313, 1423
HspAI GCGC 2 cut(s) 332, 614
KflI GGGWCCC 1 cut(s) 1378
Ksp22I TGATCA 1 cut(s) 276
Kzo9I GATC 6 cut(s) 195, 265, 276, 423, 1057, 1264
LmnI GCTCC 4 cut(s) 361, 990, 1111, 1126
Lsp1109I GCAGC 5 cut(s) 71, 839, 978, 1358, 1528
MabI ACCWGGT 1 cut(s) 1218
MaeI CTAG 7 cut(s) 87, 335, 632, 741, 764, 1452, 1521
MaeII ACGT 1 cut(s) 484
MaeIII GTNAC 5 cut(s) 6, 1042, 1168, 1273, 1516
MalI GATC 6 cut(s) 197, 267, 278, 425, 1059, 1266
MboI GATC 6 cut(s) 195, 265, 276, 423, 1057, 1264
MfeI CAATTG 1 cut(s) 290
MhlI GDGCHC 2 cut(s) 1245, 1419
MlsI TGGCCA 1 cut(s) 1155
MluCI AATT 6 cut(s) 44, 290, 887, 1084, 1181, 1298
MluNI TGGCCA 1 cut(s) 1155
MlyI GAGTC 2 cut(s) 14, 1278
MmeI TCCRAC 1 cut(s) 54
Mox20I TGGCCA 1 cut(s) 1155
MscI TGGCCA 1 cut(s) 1155
MseI TTAA 1 cut(s) 783
MslI CAYNNNNRTG 2 cut(s) 1166, 1424
Msp20I TGGCCA 1 cut(s) 1155
MspI CCGG 2 cut(s) 650, 988
MspR9I CCNGG 4 cut(s) 172, 1019, 1220, 1510
MunI CAATTG 1 cut(s) 290
MvaI CCWGG 4 cut(s) 172, 1019, 1220, 1510
MvnI CGCG 3 cut(s) 507, 614, 1583
MwoI GCNNNNNNNGC 8 cut(s) 59, 338, 622, 737, 937, 1346, 1571, 1580
NcoI CCATGG 1 cut(s) 1419
NdeII GATC 6 cut(s) 195, 265, 276, 423, 1057, 1264
NheI GCTAGC 1 cut(s) 334
NlaIII CATG 8 cut(s) 493, 802, 898, 937, 1076, 1238, 1313, 1423
NlaIV GGNNCC 5 cut(s) 357, 654, 1113, 1379, 1380
NmeAIII GCCGAG 1 cut(s) 1209
NmuCI GTSAC 4 cut(s) 6, 1168, 1273, 1516
NotI GCGGCCGC 1 cut(s) 54
NruI TCGCGA 1 cut(s) 507
NspI RCATGY 1 cut(s) 937
NspV TTCGAA 1 cut(s) 1367
OliI CACNNNNGTG 1 cut(s) 1166
PagI TCATGA 1 cut(s) 894
PaqCI CACCTGC 1 cut(s) 925
PceI AGGCCT 2 cut(s) 1259, 1565
PfeI GAWTC 3 cut(s) 26, 719, 982
PflFI GACNNNGTC 1 cut(s) 523
PflMI CCANNNNNTGG 1 cut(s) 978
PleI GAGTC 2 cut(s) 13, 1277
PmaCI CACGTG 1 cut(s) 485
PmlI CACGTG 1 cut(s) 485
PpsI GAGTC 2 cut(s) 13, 1277
Ppu21I YACGTR 1 cut(s) 485
PpuMI RGGWCCY 2 cut(s) 628, 1378
Psp5II RGGWCCY 2 cut(s) 628, 1378
Psp6I CCWGG 4 cut(s) 170, 1017, 1218, 1508
PspCI CACGTG 1 cut(s) 485
PspGI CCWGG 4 cut(s) 170, 1017, 1218, 1508
PspN4I GGNNCC 5 cut(s) 357, 654, 1113, 1379, 1380
PspPI GGNCC 3 cut(s) 628, 652, 1378
PspPPI RGGWCCY 2 cut(s) 628, 1378
PstI CTGCAG 1 cut(s) 422
PstNI CAGNNNCTG 2 cut(s) 262, 1024
PsyI GACNNNGTC 1 cut(s) 523
RruI TCGCGA 1 cut(s) 507
RsaI GTAC 2 cut(s) 167, 1103
RsaNI GTAC 2 cut(s) 166, 1102
RseI CAYNNNNRTG 2 cut(s) 1166, 1424
SaqAI TTAA 1 cut(s) 783
Sau3AI GATC 6 cut(s) 195, 265, 276, 423, 1057, 1264
Sau96I GGNCC 3 cut(s) 628, 652, 1378
SchI GAGTC 2 cut(s) 14, 1278
ScrFI CCNGG 4 cut(s) 172, 1019, 1220, 1510
SduI GDGCHC 2 cut(s) 1245, 1419
SexAI ACCWGGT 1 cut(s) 1218
SfcI CTRYAG 2 cut(s) 254, 418
SfuI TTCGAA 1 cut(s) 1367
SinI GGWCC 3 cut(s) 628, 652, 1378
SmiMI CAYNNNNRTG 2 cut(s) 1166, 1424
SmlI CTYRAG 1 cut(s) 515
SmoI CTYRAG 1 cut(s) 515
SpeI ACTAGT 1 cut(s) 763
Sse9I AATT 6 cut(s) 44, 290, 887, 1084, 1181, 1298
SseBI AGGCCT 2 cut(s) 1259, 1565
SsiI CCGC 7 cut(s) 53, 57, 128, 188, 338, 937, 1581
SspMI CTAG 7 cut(s) 87, 335, 632, 741, 764, 1452, 1521
StuI AGGCCT 2 cut(s) 1259, 1565
StyD4I CCNGG 4 cut(s) 170, 1017, 1218, 1508
StyI CCWWGG 2 cut(s) 659, 1419
TaaI ACNGT 2 cut(s) 1165, 1191
TaiI ACGT 1 cut(s) 487
TaqI TCGA 4 cut(s) 768, 861, 1267, 1367
TasI AATT 6 cut(s) 44, 290, 887, 1084, 1181, 1298
TauI GCSGC 5 cut(s) 56, 59, 341, 940, 1583
TfiI GAWTC 3 cut(s) 26, 719, 982
Tru1I TTAA 1 cut(s) 783
Tru9I TTAA 1 cut(s) 783
TscAI CASTG 5 cut(s) 415, 760, 1141, 1170, 1196
TseFI GTSAC 4 cut(s) 6, 1168, 1273, 1516
TseI GCWGC 5 cut(s) 59, 827, 966, 1346, 1541
Tsp45I GTSAC 4 cut(s) 6, 1168, 1273, 1516
TspDTI ATGAA 6 cut(s) 136, 732, 786, 819, 883, 1326
TspGWI ACGGA 4 cut(s) 409, 702, 968, 993
TspRI CASTG 5 cut(s) 415, 760, 1141, 1170, 1196
Tth111I GACNNNGTC 1 cut(s) 523
Van91I CCANNNNNTGG 1 cut(s) 978
VpaK11BI GGWCC 3 cut(s) 628, 652, 1378
XapI RAATTY 1 cut(s) 887
XceI RCATGY 1 cut(s) 937
XcmI CCANNNNNNNNNTGG 1 cut(s) 919
XspI CTAG 7 cut(s) 87, 335, 632, 741, 764, 1452, 1521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.