Rmu_sc0012344.1_g000009

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012344.1
OG0000057
Physical Location & Seq
Reverse (-)
17294 .. 19407
2114 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012344.1_g000009.1.cds

Sequence Viewer

Length: 1752 bp
atgggagaactcatcacggaggggggcagttttgagcatctcctcagagagacagatgcaaggaagaacgcttccagaggaacatacgtgccaggtaaacaccgtactgtagcggccctgagctaccagccggccacttacgacccttattaccatcacaatactggagaagtggtccaggatgacgaagaggatgaggataacgatatagcagcctacgagctaaccgggaagaagaacccgtccttgaagcagttgaagatttccaaggagcctgttaagctcaaatcgatggccttcaccaaaccggagtttgcgacatatacttatgatgccaacaaagctcacgaaatcctcgtcgagatgattgctgcgaaaatgctcaaagaccagattcaggtatggcttaataacagtagtttgcaggtagaagctccagtcacagcggcggcactagtcgacgtggaccccttccctgacaccggaatcaatatggtcaatgtggattggaacaaacagcagcgacggaaaccaactctggatttggttccgagcaaacaaagtgatagttccatcgcgggtgaagcgcgagccaaggatagaattgggtcaaccaaccaagcctcacccgtgattctgtgctcgcgatgtaaagaggaatgcggtatccaaataccgcacgaggaagtcgaacagacatttcactttggttccctaccaccaatcaagtgggcctcgtcgtctcggaactatcagccttccagtccaagagaacgggagaaaacggtatcaccatcatcccccagagactccaacctatttataaagctaaaagcagctgcaggtagtccgaaacaagagcagaccaagagcgatggcaaagatgttctgactaagccctatataccacctgcttcagctaaccctatcaaagagggcagatggtacaccagggaaaagggcaaggcagtggagattagcccgtcccagaaaaggaagttacagcgcaggtttggcgaagccaagcgcgcgctagaggctttagatcagggcctgatcaaacattcccaactagtcaagtcgcccgaacaataccagaaagagatggaagcgctggtcgctaaaccattgagacctccccgtgtttttagcaaacaaacagattcactaacaggggcttcaaagcctagtgtgttttgtaggattactaaggagcgctcaccacctcttactcgaatggaaaactcgccaactcggcgcccgcatgtcaggcgcaggctctcccatgaggcatcagtggtcaaggcttcagtctttgataggctgggggacaaggacagagttagtaatactttgcagtggcgacccaagaaaatccaaagtgtggtcatctctgcctcagaggagcacagggaaccggagaaccctaagccggttgttgtggagcaggaactcgagccacaagagctcaaacattgccaggtaaaaggcctcacggaagggtcgttggtagattgtttggctaggcagttccaaaccgatatctcggacgaggagcctaagctcgaattggacaatgacatggaggggactgagacagctgacgtttcttgcaacatggtttatgtactccccgcgagatacgcattgccagtcgctgctcaagattgcgtggaggcagcggaagagagtgtacaaccattgcaggtcacttcagcagccgcgacacctgtagaagacaggatctcatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

583

Amino Acids

65.15

Weight (kDa)

6.89

Isoelectric Point (pI)

54.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 824
AarI CACCTGC 1 cut(s) 919
Acc36I ACCTGC 5 cut(s) 415, 833, 919, 999, 1696
AccB1I GGYRCC 1 cut(s) 1257
AccB7I CCANNNNNTGG 1 cut(s) 1384
AccI GTMKAC 1 cut(s) 459
AccII CGCG 7 cut(s) 578, 589, 646, 1029, 1031, 1637, 1724
AclWI GGATC 1 cut(s) 1751
AcoI YGGCCR 1 cut(s) 132
AcuI CTGAAG 3 cut(s) 900, 1293, 1698
AcyI GRCGYC 1 cut(s) 1258
AfaI GTAC 4 cut(s) 106, 947, 1629, 1695
AfeI AGCGCT 2 cut(s) 1113, 1217
AfiI CCNNNNNNNGG 5 cut(s) 397, 482, 993, 1384, 1432
AgsI TTSAA 3 cut(s) 250, 259, 1182
AhlI ACTAGT 2 cut(s) 454, 1072
AjiI CACGTC 1 cut(s) 463
AjnI CCWGG 4 cut(s) 91, 177, 950, 1479
Alw21I GWGCWC 3 cut(s) 644, 1410, 1470
Alw26I GTCTC 5 cut(s) 44, 747, 801, 1126, 1589
AlwI GGATC 1 cut(s) 1751
AlwNI CAGNNNCTG 2 cut(s) 1054, 1658
Ama87I CYCGRG 1 cut(s) 1454
Aor51HI AGCGCT 2 cut(s) 1113, 1217
AoxI GGCC 6 cut(s) 114, 132, 294, 732, 1051, 1489
ApeKI GCWGC 8 cut(s) 212, 371, 520, 836, 839, 1658, 1679, 1718
ArsI GACNNNNNNTTYG 2 cut(s) 342, 374
AspLEI GCGC 9 cut(s) 589, 1008, 1029, 1031, 1033, 1114, 1218, 1260, 1275
AspS9I GGNCC 5 cut(s) 115, 175, 466, 732, 1051
AsuC2I CCSGG 1 cut(s) 229
AsuHPI GGTGA 5 cut(s) 292, 593, 618, 783, 1212
AvaI CYCGRG 1 cut(s) 1454
AvaII GGWCC 2 cut(s) 175, 466
BanI GGYRCC 1 cut(s) 1257
BanII GRGCYC 1 cut(s) 1470
BarI GAAGNNNNNNTAC 2 cut(s) 1677, 1709
BauI CACGAG 1 cut(s) 680
BbsI GAAGAC 1 cut(s) 1743
Bbv12I GWGCWC 3 cut(s) 644, 1410, 1470
BbvI GCAGC 8 cut(s) 224, 358, 532, 826, 848, 1645, 1691, 1730
BccI CCATC 7 cut(s) 162, 286, 581, 802, 869, 936, 1099
BcgI CGANNNNNNTGC 2 cut(s) 350, 384
BciT130I CCWGG 4 cut(s) 93, 179, 952, 1481
BciVI GTATCC 1 cut(s) 677
BclI TGATCA 1 cut(s) 1056
BcnI CCSGG 1 cut(s) 229
BcoDI GTCTC 5 cut(s) 44, 747, 801, 1126, 1589
BcuI ACTAGT 2 cut(s) 454, 1072
BfaI CTAG 5 cut(s) 455, 1034, 1073, 1188, 1524
BfmI CTRYAG 3 cut(s) 108, 840, 1731
BfoI RGCGCY 3 cut(s) 1115, 1219, 1261
BfuAI ACCTGC 5 cut(s) 415, 833, 919, 999, 1696
BfuI GTATCC 1 cut(s) 677
BglI GCCNNNNNGGC 1 cut(s) 1255
Bme1390I CCNGG 5 cut(s) 93, 179, 229, 952, 1481
Bme18I GGWCC 2 cut(s) 175, 466
BmeT110I CYCGRG 1 cut(s) 1454
BmgBI CACGTC 1 cut(s) 463
BmgT120I GGNCC 5 cut(s) 115, 175, 466, 732, 1051
BmiI GGNNCC 7 cut(s) 273, 468, 549, 712, 1259, 1416, 1557
BmrFI CCNGG 5 cut(s) 93, 179, 229, 952, 1481
BmsI GCATC 4 cut(s) 46, 46, 322, 1301
BpiI GAAGAC 1 cut(s) 1743
BpmI CTGGAG 2 cut(s) 186, 420
Bpu10I CCTNAGC 3 cut(s) 119, 1428, 1560
BpuEI CTTGAG 1 cut(s) 1647
BpuMI CCSGG 1 cut(s) 229
Bsa29I ATCGAT 1 cut(s) 290
BsaAI YACGTR 1 cut(s) 88
BsaHI GRCGYC 1 cut(s) 1258
BsaI GGTCTC 1 cut(s) 1126
BsaJI CCNNGG 3 cut(s) 267, 594, 951
BsaWI WCCGGW 3 cut(s) 307, 482, 1417
BsaXI ACNNNNNCTCC 2 cut(s) 159, 189
Bsc4I CCNNNNNNNGG 5 cut(s) 397, 482, 993, 1384, 1432
Bse118I RCCGGY 2 cut(s) 130, 1432
Bse1I ACTGG 4 cut(s) 169, 437, 762, 1652
Bse3DI GCAATG 3 cut(s) 1474, 1646, 1700
BseBI CCWGG 4 cut(s) 93, 179, 952, 1481
BseCI ATCGAT 1 cut(s) 290
BseDI CCNNGG 3 cut(s) 267, 594, 951
BseGI GGATG 3 cut(s) 187, 199, 797
BseLI CCNNNNNNNGG 5 cut(s) 397, 482, 993, 1384, 1432
BseMI GCAATG 3 cut(s) 1474, 1646, 1700
BseMII CTCAG 4 cut(s) 58, 110, 1413, 1584
BseNI ACTGG 4 cut(s) 169, 437, 762, 1652
BsePI GCGCGC 2 cut(s) 1027, 1029
BseRI GAGGAG 3 cut(s) 32, 1418, 1568
BseXI GCAGC 8 cut(s) 224, 358, 532, 826, 848, 1645, 1691, 1730
BseYI CCCAGC 1 cut(s) 1324
Bsh1236I CGCG 7 cut(s) 578, 589, 646, 1029, 1031, 1637, 1724
BshFI GGCC 6 cut(s) 116, 134, 296, 734, 1053, 1491
BshNI GGYRCC 1 cut(s) 1257
BshVI ATCGAT 1 cut(s) 290
BsiHKAI GWGCWC 3 cut(s) 644, 1410, 1470
BsiHKCI CYCGRG 1 cut(s) 1454
BsiSI CCGG 6 cut(s) 131, 228, 308, 483, 1418, 1433
BslFI GGGAC 3 cut(s) 970, 1343, 1603
BslI CCNNNNNNNGG 5 cut(s) 397, 482, 993, 1384, 1432
BsmAI GTCTC 5 cut(s) 44, 747, 801, 1126, 1589
BsmBI CGTCTC 1 cut(s) 747
BsmFI GGGAC 3 cut(s) 970, 1343, 1603
BsmI GAATGC 1 cut(s) 665
BsnI GGCC 6 cut(s) 116, 134, 296, 734, 1053, 1491
Bso31I GGTCTC 1 cut(s) 1126
BsoBI CYCGRG 1 cut(s) 1454
Bsp1286I GDGCHC 3 cut(s) 644, 1410, 1470
Bsp1407I TGTACA 1 cut(s) 1693
Bsp143I GATC 3 cut(s) 1045, 1056, 1743
Bsp68I TCGCGA 1 cut(s) 646
BspANI GGCC 6 cut(s) 116, 134, 296, 734, 1053, 1491
BspCNI CTCAG 4 cut(s) 57, 111, 1412, 1585
BspDI ATCGAT 1 cut(s) 290
BspFNI CGCG 7 cut(s) 578, 589, 646, 1029, 1031, 1637, 1724
BspLI GGNNCC 7 cut(s) 273, 468, 549, 712, 1259, 1416, 1557
BspMAI CTGCAG 1 cut(s) 844
BspMI ACCTGC 5 cut(s) 415, 833, 919, 999, 1696
BspPI GGATC 1 cut(s) 1751
BspT107I GGYRCC 1 cut(s) 1257
BspTNI GGTCTC 1 cut(s) 1126
BsrDI GCAATG 3 cut(s) 1474, 1646, 1700
BsrFI RCCGGY 2 cut(s) 130, 1432
BsrGI TGTACA 1 cut(s) 1693
BsrI ACTGG 4 cut(s) 169, 437, 762, 1652
BssAI RCCGGY 2 cut(s) 130, 1432
BssECI CCNNGG 3 cut(s) 267, 594, 951
BssHII GCGCGC 2 cut(s) 1027, 1029
BssMI GATC 3 cut(s) 1045, 1056, 1743
BssNI GRCGYC 1 cut(s) 1258
BssSI CACGAG 1 cut(s) 680
BssT1I CCWWGG 2 cut(s) 267, 594
Bst2BI CACGAG 1 cut(s) 680
Bst2UI CCWGG 4 cut(s) 93, 179, 952, 1481
Bst4CI ACNGT 4 cut(s) 104, 109, 416, 787
Bst6I CTCTTC 2 cut(s) 183, 1680
BstACI GRCGYC 1 cut(s) 1258
BstAUI TGTACA 1 cut(s) 1693
BstBAI YACGTR 1 cut(s) 88
BstC8I GCNNGC 7 cut(s) 132, 591, 644, 1029, 1031, 1262, 1277
BstDEI CTNAG 8 cut(s) 44, 119, 894, 1209, 1399, 1428, 1560, 1593
BstF5I GGATG 3 cut(s) 187, 199, 797
BstFNI CGCG 7 cut(s) 578, 589, 646, 1029, 1031, 1637, 1724
BstH2I RGCGCY 3 cut(s) 1115, 1219, 1261
BstHHI GCGC 9 cut(s) 589, 1008, 1029, 1031, 1033, 1114, 1218, 1260, 1275
BstKTI GATC 3 cut(s) 1048, 1059, 1746
BstMAI GTCTC 5 cut(s) 44, 747, 801, 1126, 1589
BstMBI GATC 3 cut(s) 1045, 1056, 1743
BstNI CCWGG 4 cut(s) 93, 179, 952, 1481
BstNSI RCATGY 1 cut(s) 1268
BstSCI CCNGG 5 cut(s) 91, 177, 227, 950, 1479
BstSFI CTRYAG 3 cut(s) 108, 840, 1731
BstUI CGCG 7 cut(s) 578, 589, 646, 1029, 1031, 1637, 1724
BstV1I GCAGC 8 cut(s) 224, 358, 532, 826, 848, 1645, 1691, 1730
BstV2I GAAGAC 1 cut(s) 1743
BstX2I RGATCY 1 cut(s) 1743
BstXI CCANNNNNNTGG 1 cut(s) 729
BstYI RGATCY 1 cut(s) 1743
Bsu15I ATCGAT 1 cut(s) 290
BsuI GTATCC 1 cut(s) 677
BsuRI GGCC 6 cut(s) 116, 134, 296, 734, 1053, 1491
BsuTUI ATCGAT 1 cut(s) 290
BtgZI GCGATG 3 cut(s) 559, 661, 888
BtrI CACGTC 1 cut(s) 463
BtsCI GGATG 3 cut(s) 187, 199, 797
BtsI GCAGTG 2 cut(s) 975, 1364
BtsIMutI CAGTG 3 cut(s) 975, 1302, 1364
BtuMI TCGCGA 1 cut(s) 646
BveI ACCTGC 5 cut(s) 415, 833, 919, 999, 1696
Cac8I GCNNGC 7 cut(s) 132, 591, 644, 1029, 1031, 1262, 1277
CaiI CAGNNNCTG 2 cut(s) 1054, 1658
CfoI GCGC 9 cut(s) 589, 1008, 1029, 1031, 1033, 1114, 1218, 1260, 1275
Cfr10I RCCGGY 2 cut(s) 130, 1432
Cfr13I GGNCC 5 cut(s) 115, 175, 466, 732, 1051
ClaI ATCGAT 1 cut(s) 290
Csp6I GTAC 4 cut(s) 105, 946, 1628, 1694
CviAII CATG 4 cut(s) 1265, 1286, 1582, 1618
CviQI GTAC 4 cut(s) 105, 946, 1628, 1694
DdeI CTNAG 8 cut(s) 44, 119, 894, 1209, 1399, 1428, 1560, 1593
DinI GGCGCC 1 cut(s) 1259
DpnI GATC 3 cut(s) 1047, 1058, 1745
DpnII GATC 3 cut(s) 1045, 1056, 1743
EaeI YGGCCR 1 cut(s) 132
Eam1104I CTCTTC 2 cut(s) 183, 1680
EarI CTCTTC 2 cut(s) 183, 1680
Ecl136II GAGCTC 1 cut(s) 1468
Eco130I CCWWGG 2 cut(s) 267, 594
Eco147I AGGCCT 1 cut(s) 1491
Eco24I GRGCYC 1 cut(s) 1470
Eco31I GGTCTC 1 cut(s) 1126
Eco32I GATATC 1 cut(s) 1543
Eco47I GGWCC 2 cut(s) 175, 466
Eco47III AGCGCT 2 cut(s) 1113, 1217
Eco53kI GAGCTC 1 cut(s) 1468
Eco57I CTGAAG 3 cut(s) 900, 1293, 1698
Eco88I CYCGRG 1 cut(s) 1454
EcoICRI GAGCTC 1 cut(s) 1468
EcoO109I RGGNCCY 1 cut(s) 1051
EcoRII CCWGG 4 cut(s) 91, 177, 950, 1479
EcoRV GATATC 1 cut(s) 1543
EcoT14I CCWWGG 2 cut(s) 267, 594
EcoT38I GRGCYC 1 cut(s) 1470
EgeI GGCGCC 1 cut(s) 1259
EheI GGCGCC 1 cut(s) 1259
ErhI CCWWGG 2 cut(s) 267, 594
Esp3I CGTCTC 1 cut(s) 747
FaeI CATG 4 cut(s) 1268, 1289, 1585, 1621
FaqI GGGAC 3 cut(s) 970, 1343, 1603
FatI CATG 4 cut(s) 1264, 1285, 1581, 1617
FauI CCCGC 3 cut(s) 571, 1269, 1642
FbaI TGATCA 1 cut(s) 1056
FblI GTMKAC 1 cut(s) 459
FokI GGATG 3 cut(s) 194, 206, 784
FriOI GRGCYC 1 cut(s) 1470
FspBI CTAG 5 cut(s) 455, 1034, 1073, 1188, 1524
GlaI GCGC 9 cut(s) 588, 1007, 1028, 1030, 1032, 1113, 1217, 1259, 1274
GsaI CCCAGC 1 cut(s) 1328
GsuI CTGGAG 2 cut(s) 186, 420
HaeII RGCGCY 3 cut(s) 1115, 1219, 1261
HaeIII GGCC 6 cut(s) 116, 134, 296, 734, 1053, 1491
HapII CCGG 6 cut(s) 131, 228, 308, 483, 1418, 1433
HhaI GCGC 9 cut(s) 589, 1008, 1029, 1031, 1033, 1114, 1218, 1260, 1275
Hin1I GRCGYC 1 cut(s) 1258
Hin1II CATG 4 cut(s) 1268, 1289, 1585, 1621
Hin6I GCGC 9 cut(s) 587, 1006, 1027, 1029, 1031, 1112, 1216, 1258, 1273
HinP1I GCGC 9 cut(s) 587, 1006, 1027, 1029, 1031, 1112, 1216, 1258, 1273
HincII GTYRAC 2 cut(s) 460, 612
HindII GTYRAC 2 cut(s) 460, 612
HinfI GANTC 5 cut(s) 394, 486, 634, 809, 1163
HpaII CCGG 6 cut(s) 131, 228, 308, 483, 1418, 1433
HphI GGTGA 5 cut(s) 292, 593, 618, 783, 1212
Hpy166II GTNNAC 6 cut(s) 98, 460, 466, 612, 948, 1694
Hpy188I TCNGA 7 cut(s) 47, 552, 747, 852, 891, 1402, 1549
Hpy188III TCNNGA 6 cut(s) 75, 347, 361, 539, 645, 1664
Hpy8I GTNNAC 6 cut(s) 98, 460, 466, 612, 948, 1694
Hpy99I CGWCG 4 cut(s) 362, 464, 528, 742
HpyAV CCTTC 4 cut(s) 307, 481, 768, 1493
HpyCH4III ACNGT 4 cut(s) 104, 109, 416, 787
HpyCH4IV ACGT 3 cut(s) 87, 462, 1605
HpyCH4V TGCA 6 cut(s) 59, 424, 842, 1357, 1614, 1705
HpyF3I CTNAG 8 cut(s) 44, 119, 894, 1209, 1399, 1428, 1560, 1593
HpySE526I ACGT 3 cut(s) 87, 462, 1605
Hsp92I GRCGYC 1 cut(s) 1258
Hsp92II CATG 4 cut(s) 1268, 1289, 1585, 1621
HspAI GCGC 9 cut(s) 587, 1006, 1027, 1029, 1031, 1112, 1216, 1258, 1273
KasI GGCGCC 1 cut(s) 1257
KroI GCCGGC 1 cut(s) 130
KroNI GCCGGC 1 cut(s) 132
Ksp22I TGATCA 1 cut(s) 1056
Kzo9I GATC 3 cut(s) 1045, 1056, 1743
LmnI GCTCC 6 cut(s) 271, 439, 1213, 1405, 1444, 1555
Lsp1109I GCAGC 8 cut(s) 224, 358, 532, 826, 848, 1645, 1691, 1730
LweI GCATC 4 cut(s) 46, 46, 322, 1301
MaeI CTAG 5 cut(s) 455, 1034, 1073, 1188, 1524
MaeII ACGT 3 cut(s) 87, 462, 1605
MaeIII GTNAC 3 cut(s) 439, 999, 1708
MalI GATC 3 cut(s) 1047, 1058, 1745
MboI GATC 3 cut(s) 1045, 1056, 1743
MboII GAAGA 7 cut(s) 76, 200, 244, 247, 271, 1697, 1748
MflI RGATCY 1 cut(s) 1743
MhlI GDGCHC 3 cut(s) 644, 1410, 1470
MluCI AATT 2 cut(s) 603, 1568
Mly113I GGCGCC 1 cut(s) 1258
MlyI GAGTC 1 cut(s) 803
MmeI TCCRAC 1 cut(s) 837
MroNI GCCGGC 1 cut(s) 130
MseI TTAA 2 cut(s) 279, 408
MspA1I CMGCKG 4 cut(s) 446, 839, 1601, 1682
MspI CCGG 6 cut(s) 131, 228, 308, 483, 1418, 1433
MspR9I CCNGG 5 cut(s) 93, 179, 229, 952, 1481
Mva1269I GAATGC 1 cut(s) 665
MvaI CCWGG 4 cut(s) 93, 179, 952, 1481
MvnI CGCG 7 cut(s) 578, 589, 646, 1029, 1031, 1637, 1724
NaeI GCCGGC 1 cut(s) 132
NarI GGCGCC 1 cut(s) 1258
NciI CCSGG 1 cut(s) 229
NdeII GATC 3 cut(s) 1045, 1056, 1743
NgoMIV GCCGGC 1 cut(s) 130
NlaIII CATG 4 cut(s) 1268, 1289, 1585, 1621
NlaIV GGNNCC 7 cut(s) 273, 468, 549, 712, 1259, 1416, 1557
NmeAIII GCCGAG 1 cut(s) 1234
NmuCI GTSAC 2 cut(s) 439, 1708
NruI TCGCGA 1 cut(s) 646
NspI RCATGY 1 cut(s) 1268
PaeR7I CTCGAG 1 cut(s) 1454
PaqCI CACCTGC 1 cut(s) 919
PauI GCGCGC 2 cut(s) 1027, 1029
PceI AGGCCT 1 cut(s) 1491
PcsI WCGNNNNNNNCGW 3 cut(s) 354, 687, 1502
PctI GAATGC 1 cut(s) 665
PdiI GCCGGC 1 cut(s) 132
PfeI GAWTC 4 cut(s) 394, 486, 634, 1163
PflMI CCANNNNNTGG 1 cut(s) 1384
PfoI TCCNGGA 1 cut(s) 177
PleI GAGTC 1 cut(s) 803
PluTI GGCGCC 1 cut(s) 1261
PpsI GAGTC 1 cut(s) 803
Ppu21I YACGTR 1 cut(s) 88
PsiI TTATAA 1 cut(s) 824
Psp124BI GAGCTC 1 cut(s) 1470
Psp6I CCWGG 4 cut(s) 91, 177, 950, 1479
PspFI CCCAGC 1 cut(s) 1324
PspGI CCWGG 4 cut(s) 91, 177, 950, 1479
PspN4I GGNNCC 7 cut(s) 273, 468, 549, 712, 1259, 1416, 1557
PspPI GGNCC 5 cut(s) 115, 175, 466, 732, 1051
PspXI VCTCGAGB 1 cut(s) 1454
PstI CTGCAG 1 cut(s) 844
PstNI CAGNNNCTG 2 cut(s) 1054, 1658
PsuI RGATCY 1 cut(s) 1743
PteI GCGCGC 2 cut(s) 1027, 1029
PvuII CAGCTG 2 cut(s) 839, 1601
RruI TCGCGA 1 cut(s) 646
RsaI GTAC 4 cut(s) 106, 947, 1629, 1695
RsaNI GTAC 4 cut(s) 105, 946, 1628, 1694
SacI GAGCTC 1 cut(s) 1470
SalI GTCGAC 1 cut(s) 458
SaqAI TTAA 2 cut(s) 279, 408
Sau3AI GATC 3 cut(s) 1045, 1056, 1743
Sau96I GGNCC 5 cut(s) 115, 175, 466, 732, 1051
SchI GAGTC 1 cut(s) 803
ScrFI CCNGG 5 cut(s) 93, 179, 229, 952, 1481
SduI GDGCHC 3 cut(s) 644, 1410, 1470
SfaNI GCATC 4 cut(s) 46, 46, 322, 1301
SfcI CTRYAG 3 cut(s) 108, 840, 1731
SfoI GGCGCC 1 cut(s) 1259
Sfr274I CTCGAG 1 cut(s) 1454
SinI GGWCC 2 cut(s) 175, 466
SlaI CTCGAG 1 cut(s) 1454
SmlI CTYRAG 2 cut(s) 1454, 1662
SmoI CTYRAG 2 cut(s) 1454, 1662
SpeI ACTAGT 2 cut(s) 454, 1072
Sse9I AATT 2 cut(s) 603, 1568
SseBI AGGCCT 1 cut(s) 1491
SspDI GGCGCC 1 cut(s) 1257
SspMI CTAG 5 cut(s) 455, 1034, 1073, 1188, 1524
SstI GAGCTC 1 cut(s) 1470
StuI AGGCCT 1 cut(s) 1491
StyD4I CCNGG 5 cut(s) 91, 177, 227, 950, 1479
StyI CCWWGG 2 cut(s) 267, 594
TaaI ACNGT 4 cut(s) 104, 109, 416, 787
TaiI ACGT 3 cut(s) 90, 465, 1608
TaqI TCGA 7 cut(s) 290, 360, 459, 690, 1234, 1455, 1566
TasI AATT 2 cut(s) 603, 1568
TatI WGTACW 2 cut(s) 1627, 1693
TauI GCSGC 4 cut(s) 116, 449, 452, 1724
TfiI GAWTC 4 cut(s) 394, 486, 634, 1163
Tru1I TTAA 2 cut(s) 279, 408
Tru9I TTAA 2 cut(s) 279, 408
TscAI CASTG 3 cut(s) 975, 1302, 1364
TseFI GTSAC 2 cut(s) 439, 1708
TseI GCWGC 8 cut(s) 212, 371, 520, 836, 839, 1658, 1679, 1718
Tsp45I GTSAC 2 cut(s) 439, 1708
TspGWI ACGGA 3 cut(s) 32, 541, 1511
TspRI CASTG 3 cut(s) 975, 1302, 1364
Van91I CCANNNNNTGG 1 cut(s) 1384
VpaK11BI GGWCC 2 cut(s) 175, 466
XceI RCATGY 1 cut(s) 1268
XcmI CCANNNNNNNNNTGG 2 cut(s) 161, 726
XhoI CTCGAG 1 cut(s) 1454
XmiI GTMKAC 1 cut(s) 459
XspI CTAG 5 cut(s) 455, 1034, 1073, 1188, 1524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.