Rmu_sc0004641.1_g000006

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004641.1
OG0000057
Physical Location & Seq
Forward (+)
39823 .. 41428
1606 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004641.1_g000006.1.cds

Sequence Viewer

Length: 927 bp
atggggatgctagtcaatgattttgccctagaagacacggagttgttctttgtgtttgaacccagcgaagctaaggaaggaagtcaccagcacaccattaagggtgagaacgttactaccatccaggcaaacgaggttgtcaatacttatgttgccgctaatattgttgggggcgcaacaagagacgccttagttcctatgcctatcctagagggggcgaatgtcgaggaacaactcgcgatcatcatggctaacaaagacagagatcgagaaaagatagccactgatatggccagggacattgcgaagacagagcaacgcctacgcgagctggaccagcgcattgtccaacatgctcgggagactaggaagcaggttgaacaatcagcgaacaaaaaagctgaactataccaggctaaagaggttttgaataatgcattgggagaccccaacgctatcctaggatctctgggtcagtcctccggatttggcaagtatgtaccactgaatgatcgagaaaagggcagcagcaacaccgctacaccctctgcagccgctactgccgcgtcaactaaaagtaaggaaaaagcccttgtaattagcggcagtgacaaggccacaccaccggtcacacagaagagcaaaactttgaaaattggtgaaggtactcttgctgatcctgtcgtgtttactcaatacgacagtgatggagcagagaatgtgtaccaggagctcctagggaactactataggattgatcaggtgggcaatacgatcaagatagcagctgtgacaaaagatgtgcccgcaccaacgcttactcttcaacaatccactattcccctgaccattcgccttggtgataggagcattttaatgcgacgttttaactgccatttccctacatttcttgcgttatttccttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

308

Amino Acids

33.62

Weight (kDa)

5.72

Isoelectric Point (pI)

33.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 364
AccII CGCG 3 cut(s) 239, 327, 566
AccIII TCCGGA 1 cut(s) 482
AciI CCGC 6 cut(s) 156, 537, 555, 564, 603, 807
AclI AACGTT 1 cut(s) 111
AclWI GGATC 2 cut(s) 472, 671
AcoI YGGCCR 1 cut(s) 291
AcyI GRCGYC 1 cut(s) 186
AfaI GTAC 3 cut(s) 501, 667, 725
AfiI CCNNNNNNNGG 1 cut(s) 214
AgeI ACCGGT 1 cut(s) 625
AgsI TTSAA 5 cut(s) 59, 380, 430, 652, 827
AjnI CCWGG 4 cut(s) 123, 293, 411, 726
AjuI GAANNNNNNNTTGG 2 cut(s) 422, 454
AluBI AGCT 5 cut(s) 71, 331, 401, 733, 788
AluI AGCT 5 cut(s) 71, 331, 401, 733, 788
Alw21I GWGCWC 1 cut(s) 735
Alw26I GTCTC 3 cut(s) 177, 356, 438
AlwI GGATC 2 cut(s) 472, 671
Ama87I CYCGRG 1 cut(s) 357
Aor13HI TCCGGA 1 cut(s) 482
AoxI GGCC 2 cut(s) 291, 615
ApeKI GCWGC 4 cut(s) 525, 528, 551, 785
AsiGI ACCGGT 1 cut(s) 625
AspA2I CCTAGG 2 cut(s) 460, 736
AspLEI GCGC 2 cut(s) 176, 342
AspS9I GGNCC 1 cut(s) 334
AsuHPI GGTGA 4 cut(s) 77, 116, 671, 872
AvaI CYCGRG 1 cut(s) 357
AvaII GGWCC 1 cut(s) 334
AvrII CCTAGG 2 cut(s) 460, 736
BaeGI GKGCMC 1 cut(s) 807
BalI TGGCCA 1 cut(s) 293
BanII GRGCYC 1 cut(s) 735
BbsI GAAGAC 2 cut(s) 39, 314
Bbv12I GWGCWC 1 cut(s) 735
BbvI GCAGC 4 cut(s) 537, 540, 563, 797
BccI CCATC 2 cut(s) 128, 701
BciT130I CCWGG 4 cut(s) 125, 295, 413, 728
BclI TGATCA 1 cut(s) 757
BcoDI GTCTC 3 cut(s) 177, 356, 438
BfaI CTAG 6 cut(s) 11, 29, 209, 366, 461, 737
BfmI CTRYAG 2 cut(s) 549, 748
BfuAI ACCTGC 1 cut(s) 364
BisI GCNGC 8 cut(s) 156, 526, 529, 552, 555, 564, 604, 786
BlnI CCTAGG 2 cut(s) 460, 736
BlsI GCNGC 8 cut(s) 157, 527, 530, 553, 556, 565, 605, 787
Bme1390I CCNGG 4 cut(s) 125, 295, 413, 728
Bme18I GGWCC 1 cut(s) 334
BmeT110I CYCGRG 1 cut(s) 357
BmgT120I GGNCC 1 cut(s) 334
BmrFI CCNGG 4 cut(s) 125, 295, 413, 728
BpiI GAAGAC 2 cut(s) 39, 314
Bpu10I CCTNAGC 1 cut(s) 72
BsaHI GRCGYC 1 cut(s) 186
BsaI GGTCTC 1 cut(s) 438
BsaJI CCNNGG 4 cut(s) 294, 460, 736, 856
BsaWI WCCGGW 2 cut(s) 482, 625
Bsc4I CCNNNNNNNGG 1 cut(s) 214
Bse118I RCCGGY 1 cut(s) 625
Bse3DI GCAATG 1 cut(s) 300
BseAI TCCGGA 1 cut(s) 482
BseBI CCWGG 4 cut(s) 125, 295, 413, 728
BseDI CCNNGG 4 cut(s) 294, 460, 736, 856
BseGI GGATG 2 cut(s) 12, 120
BseLI CCNNNNNNNGG 1 cut(s) 214
BseMI GCAATG 1 cut(s) 300
BseSI GKGCMC 1 cut(s) 807
BseXI GCAGC 4 cut(s) 537, 540, 563, 797
BseYI CCCAGC 1 cut(s) 62
Bsh1236I CGCG 3 cut(s) 239, 327, 566
BshFI GGCC 2 cut(s) 293, 617
BshTI ACCGGT 1 cut(s) 625
BsiHKAI GWGCWC 1 cut(s) 735
BsiHKCI CYCGRG 1 cut(s) 357
BsiSI CCGG 2 cut(s) 483, 626
BslFI GGGAC 1 cut(s) 311
BslI CCNNNNNNNGG 1 cut(s) 214
BsmAI GTCTC 3 cut(s) 177, 356, 438
BsmBI CGTCTC 1 cut(s) 177
BsmFI GGGAC 1 cut(s) 311
BsnI GGCC 2 cut(s) 293, 617
Bso31I GGTCTC 1 cut(s) 438
BsoBI CYCGRG 1 cut(s) 357
Bsp1286I GDGCHC 2 cut(s) 735, 807
Bsp13I TCCGGA 1 cut(s) 482
Bsp143I GATC 7 cut(s) 240, 265, 464, 511, 676, 757, 774
Bsp68I TCGCGA 1 cut(s) 239
BspACI CCGC 6 cut(s) 156, 537, 555, 564, 603, 807
BspANI GGCC 2 cut(s) 293, 617
BspEI TCCGGA 1 cut(s) 482
BspFNI CGCG 3 cut(s) 239, 327, 566
BspMAI CTGCAG 1 cut(s) 553
BspMI ACCTGC 1 cut(s) 364
BspPI GGATC 2 cut(s) 472, 671
BspQI GCTCTTC 1 cut(s) 632
BspTNI GGTCTC 1 cut(s) 438
BsrDI GCAATG 1 cut(s) 300
BsrFI RCCGGY 1 cut(s) 625
BssAI RCCGGY 1 cut(s) 625
BssECI CCNNGG 4 cut(s) 294, 460, 736, 856
BssMI GATC 7 cut(s) 240, 265, 464, 511, 676, 757, 774
BssNI GRCGYC 1 cut(s) 186
BssT1I CCWWGG 3 cut(s) 460, 736, 856
Bst2UI CCWGG 4 cut(s) 125, 295, 413, 728
Bst4CI ACNGT 1 cut(s) 704
Bst6I CTCTTC 2 cut(s) 632, 828
BstACI GRCGYC 1 cut(s) 186
BstC8I GCNNGC 2 cut(s) 329, 807
BstDEI CTNAG 2 cut(s) 72, 190
BstF5I GGATG 2 cut(s) 12, 120
BstFNI CGCG 3 cut(s) 239, 327, 566
BstHHI GCGC 2 cut(s) 176, 342
BstKTI GATC 7 cut(s) 243, 268, 467, 514, 679, 760, 777
BstMAI GTCTC 3 cut(s) 177, 356, 438
BstMBI GATC 7 cut(s) 240, 265, 464, 511, 676, 757, 774
BstMWI GCNNNNNNNGC 3 cut(s) 337, 560, 563
BstNI CCWGG 4 cut(s) 125, 295, 413, 728
BstNSI RCATGY 1 cut(s) 356
BstSCI CCNGG 4 cut(s) 123, 293, 411, 726
BstSFI CTRYAG 2 cut(s) 549, 748
BstSLI GKGCMC 1 cut(s) 807
BstUI CGCG 3 cut(s) 239, 327, 566
BstV1I GCAGC 4 cut(s) 537, 540, 563, 797
BstV2I GAAGAC 2 cut(s) 39, 314
BstX2I RGATCY 1 cut(s) 464
BstXI CCANNNNNNTGG 1 cut(s) 289
BstYI RGATCY 1 cut(s) 464
BsuRI GGCC 2 cut(s) 293, 617
BtsCI GGATG 2 cut(s) 12, 120
BtsI GCAGTG 1 cut(s) 613
BtsIMutI CAGTG 4 cut(s) 282, 503, 613, 709
BtuMI TCGCGA 1 cut(s) 239
BveI ACCTGC 1 cut(s) 364
Cac8I GCNNGC 2 cut(s) 329, 807
CfoI GCGC 2 cut(s) 176, 342
Cfr10I RCCGGY 1 cut(s) 625
Cfr13I GGNCC 1 cut(s) 334
CseI GACGC 2 cut(s) 194, 555
Csp6I GTAC 3 cut(s) 500, 666, 724
CspAI ACCGGT 1 cut(s) 625
CviAII CATG 2 cut(s) 247, 353
CviQI GTAC 3 cut(s) 500, 666, 724
DdeI CTNAG 2 cut(s) 72, 190
DpnI GATC 7 cut(s) 242, 267, 466, 513, 678, 759, 776
DpnII GATC 7 cut(s) 240, 265, 464, 511, 676, 757, 774
EaeI YGGCCR 1 cut(s) 291
Eam1104I CTCTTC 2 cut(s) 632, 828
EarI CTCTTC 2 cut(s) 632, 828
Ecl136II GAGCTC 1 cut(s) 733
Eco130I CCWWGG 3 cut(s) 460, 736, 856
Eco24I GRGCYC 1 cut(s) 735
Eco31I GGTCTC 1 cut(s) 438
Eco47I GGWCC 1 cut(s) 334
Eco53kI GAGCTC 1 cut(s) 733
Eco88I CYCGRG 1 cut(s) 357
EcoICRI GAGCTC 1 cut(s) 733
EcoRII CCWGG 4 cut(s) 123, 293, 411, 726
EcoT14I CCWWGG 3 cut(s) 460, 736, 856
EcoT22I ATGCAT 1 cut(s) 439
EcoT38I GRGCYC 1 cut(s) 735
ErhI CCWWGG 3 cut(s) 460, 736, 856
Esp3I CGTCTC 1 cut(s) 177
FaeI CATG 2 cut(s) 250, 356
FaiI YATR 8 cut(s) 150, 200, 248, 290, 354, 409, 498, 750
FalI AAGNNNNNCTT 2 cut(s) 654, 686
FaqI GGGAC 1 cut(s) 311
FatI CATG 2 cut(s) 246, 352
FauI CCCGC 1 cut(s) 814
FbaI TGATCA 1 cut(s) 757
Fnu4HI GCNGC 8 cut(s) 156, 526, 529, 552, 555, 564, 604, 786
FokI GGATG 2 cut(s) 19, 107
FriOI GRGCYC 1 cut(s) 735
Fsp4HI GCNGC 8 cut(s) 156, 526, 529, 552, 555, 564, 604, 786
FspBI CTAG 6 cut(s) 11, 29, 209, 366, 461, 737
GlaI GCGC 2 cut(s) 175, 341
GluI GCNGC 8 cut(s) 156, 526, 529, 552, 555, 564, 604, 786
GsaI CCCAGC 1 cut(s) 66
HaeIII GGCC 2 cut(s) 293, 617
HapII CCGG 2 cut(s) 483, 626
HgaI GACGC 2 cut(s) 194, 555
HhaI GCGC 2 cut(s) 176, 342
Hin1I GRCGYC 1 cut(s) 186
Hin1II CATG 2 cut(s) 250, 356
Hin6I GCGC 2 cut(s) 174, 340
HinP1I GCGC 2 cut(s) 174, 340
HincII GTYRAC 1 cut(s) 570
HindII GTYRAC 1 cut(s) 570
HpaII CCGG 2 cut(s) 483, 626
HphI GGTGA 4 cut(s) 77, 116, 671, 872
Hpy166II GTNNAC 3 cut(s) 570, 690, 724
Hpy188III TCNNGA 6 cut(s) 238, 269, 359, 483, 515, 778
Hpy8I GTNNAC 3 cut(s) 570, 690, 724
Hpy99I CGWCG 1 cut(s) 885
HpyAV CCTTC 2 cut(s) 71, 656
HpyCH4III ACNGT 1 cut(s) 704
HpyCH4IV ACGT 2 cut(s) 111, 883
HpyCH4V TGCA 2 cut(s) 437, 551
HpyF10VI GCNNNNNNNGC 3 cut(s) 337, 560, 563
HpyF3I CTNAG 2 cut(s) 72, 190
HpySE526I ACGT 2 cut(s) 111, 883
Hsp92I GRCGYC 1 cut(s) 186
Hsp92II CATG 2 cut(s) 250, 356
HspAI GCGC 2 cut(s) 174, 340
Kpn2I TCCGGA 1 cut(s) 482
Ksp22I TGATCA 1 cut(s) 757
Kzo9I GATC 7 cut(s) 240, 265, 464, 511, 676, 757, 774
LguI GCTCTTC 1 cut(s) 632
LmnI GCTCC 4 cut(s) 710, 730, 738, 867
Lsp1109I GCAGC 4 cut(s) 537, 540, 563, 797
MaeI CTAG 6 cut(s) 11, 29, 209, 366, 461, 737
MaeII ACGT 2 cut(s) 111, 883
MaeIII GTNAC 5 cut(s) 83, 112, 608, 628, 790
MalI GATC 7 cut(s) 242, 267, 466, 513, 678, 759, 776
MboI GATC 7 cut(s) 240, 265, 464, 511, 676, 757, 774
MboII GAAGA 4 cut(s) 44, 319, 649, 815
MflI RGATCY 1 cut(s) 464
MhlI GDGCHC 2 cut(s) 735, 807
MlsI TGGCCA 1 cut(s) 293
MluCI AATT 2 cut(s) 597, 654
MluNI TGGCCA 1 cut(s) 293
MmeI TCCRAC 1 cut(s) 373
MnlI CCTC 6 cut(s) 127, 205, 220, 415, 490, 556
Mox20I TGGCCA 1 cut(s) 293
Mph1103I ATGCAT 1 cut(s) 439
MroI TCCGGA 1 cut(s) 482
MscI TGGCCA 1 cut(s) 293
MseI TTAA 3 cut(s) 99, 875, 888
MslI CAYNNNNRTG 2 cut(s) 287, 875
Msp20I TGGCCA 1 cut(s) 293
MspA1I CMGCKG 1 cut(s) 788
MspI CCGG 2 cut(s) 483, 626
MspR9I CCNGG 4 cut(s) 125, 295, 413, 728
MvaI CCWGG 4 cut(s) 125, 295, 413, 728
MvnI CGCG 3 cut(s) 239, 327, 566
MwoI GCNNNNNNNGC 3 cut(s) 337, 560, 563
NdeII GATC 7 cut(s) 240, 265, 464, 511, 676, 757, 774
NlaIII CATG 2 cut(s) 250, 356
NmuCI GTSAC 4 cut(s) 83, 608, 628, 790
NruI TCGCGA 1 cut(s) 239
NsiI ATGCAT 1 cut(s) 439
NspI RCATGY 1 cut(s) 356
PciSI GCTCTTC 1 cut(s) 632
PinAI ACCGGT 1 cut(s) 625
PkrI GCNGC 8 cut(s) 157, 527, 530, 553, 556, 565, 605, 787
Psp124BI GAGCTC 1 cut(s) 735
Psp1406I AACGTT 1 cut(s) 111
Psp6I CCWGG 4 cut(s) 123, 293, 411, 726
PspFI CCCAGC 1 cut(s) 62
PspGI CCWGG 4 cut(s) 123, 293, 411, 726
PspPI GGNCC 1 cut(s) 334
PstI CTGCAG 1 cut(s) 553
PsuI RGATCY 1 cut(s) 464
PvuII CAGCTG 1 cut(s) 788
RruI TCGCGA 1 cut(s) 239
RsaI GTAC 3 cut(s) 501, 667, 725
RsaNI GTAC 3 cut(s) 500, 666, 724
RseI CAYNNNNRTG 2 cut(s) 287, 875
SacI GAGCTC 1 cut(s) 735
SapI GCTCTTC 1 cut(s) 632
SaqAI TTAA 3 cut(s) 99, 875, 888
SatI GCNGC 8 cut(s) 156, 526, 529, 552, 555, 564, 604, 786
Sau3AI GATC 7 cut(s) 240, 265, 464, 511, 676, 757, 774
Sau96I GGNCC 1 cut(s) 334
ScrFI CCNGG 4 cut(s) 125, 295, 413, 728
SduI GDGCHC 2 cut(s) 735, 807
SfcI CTRYAG 2 cut(s) 549, 748
SinI GGWCC 1 cut(s) 334
SmiMI CAYNNNNRTG 2 cut(s) 287, 875
Sse9I AATT 2 cut(s) 597, 654
SsiI CCGC 6 cut(s) 156, 537, 555, 564, 603, 807
SspI AATATT 1 cut(s) 163
SspMI CTAG 6 cut(s) 11, 29, 209, 366, 461, 737
SstI GAGCTC 1 cut(s) 735
StyD4I CCNGG 4 cut(s) 123, 293, 411, 726
StyI CCWWGG 3 cut(s) 460, 736, 856
TaaI ACNGT 1 cut(s) 704
TaiI ACGT 2 cut(s) 114, 886
TaqI TCGA 3 cut(s) 225, 268, 514
TasI AATT 2 cut(s) 597, 654
TauI GCSGC 4 cut(s) 158, 557, 566, 606
Tru1I TTAA 3 cut(s) 99, 875, 888
Tru9I TTAA 3 cut(s) 99, 875, 888
TscAI CASTG 4 cut(s) 289, 510, 613, 709
TseFI GTSAC 4 cut(s) 83, 608, 628, 790
TseI GCWGC 4 cut(s) 525, 528, 551, 785
Tsp45I GTSAC 4 cut(s) 83, 608, 628, 790
TspGWI ACGGA 1 cut(s) 53
TspRI CASTG 4 cut(s) 289, 510, 613, 709
VpaK11BI GGWCC 1 cut(s) 334
XceI RCATGY 1 cut(s) 356
XmaJI CCTAGG 2 cut(s) 460, 736
XspI CTAG 6 cut(s) 11, 29, 209, 366, 461, 737
Zsp2I ATGCAT 1 cut(s) 439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.