Rmu_sc0000533.1_g000054

Retrotransposon gag protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000533.1
OG0000057
Physical Location & Seq
Reverse (-)
188748 .. 189134
387 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000533.1_g000054.1.cds

Sequence Viewer

Length: 387 bp
ctgaacgtcatcctgcctgagaaagacttagttaagttggcggtcaagggtttggaacctcgtcagcgaaaaaagcaacatggctgcatgatccagtcaatgggagaactcatcatagaggtgggcagcttcgagcatctcctcagagaaatagacgcaaggaaaaatgcgtccaaagggacatacgtactaggaaaacatcgcaccgtagcagccttgagctatcagccggctacctatgacccttactaccatcgtcacagtgaagaagcggttcaggatgacgatggggaagaggagaatgatattgctgcttatgaactaaccgggagcaagaatccagccctgaagcaactgaaaatttccaaggaacctgtcaagctataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotrans_gag

Protein Analysis

128

Amino Acids

14.44

Weight (kDa)

6.58

Isoelectric Point (pI)

44.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 100
AciI CCGC 2 cut(s) 41, 272
AclWI GGATC 1 cut(s) 85
AcsI RAATTY 1 cut(s) 360
AcuI CTGAAG 1 cut(s) 368
AfaI GTAC 1 cut(s) 189
AfiI CCNNNNNNNGG 1 cut(s) 100
AluBI AGCT 3 cut(s) 129, 222, 382
AluI AGCT 3 cut(s) 129, 222, 382
AlwI GGATC 1 cut(s) 85
ApeKI GCWGC 4 cut(s) 84, 126, 212, 311
ApoI RAATTY 1 cut(s) 360
Asp700I GAANNNNTTC 1 cut(s) 273
AsuC2I CCSGG 1 cut(s) 328
BbvI GCAGC 4 cut(s) 71, 138, 224, 298
BccI CCATC 2 cut(s) 261, 281
BcnI CCSGG 1 cut(s) 328
BfaI CTAG 1 cut(s) 191
BisI GCNGC 4 cut(s) 85, 127, 213, 312
BlsI GCNGC 4 cut(s) 86, 128, 214, 313
Bme1390I CCNGG 1 cut(s) 328
BmiI GGNNCC 2 cut(s) 57, 372
BmrFI CCNGG 1 cut(s) 328
BmsI GCATC 1 cut(s) 145
BpuEI CTTGAG 1 cut(s) 238
BpuMI CCSGG 1 cut(s) 328
BsaAI YACGTR 1 cut(s) 187
BsaJI CCNNGG 1 cut(s) 366
Bsc4I CCNNNNNNNGG 1 cut(s) 100
Bse118I RCCGGY 1 cut(s) 229
Bse1I ACTGG 1 cut(s) 94
BseDI CCNNGG 1 cut(s) 366
BseGI GGATG 2 cut(s) 9, 286
BseLI CCNNNNNNNGG 1 cut(s) 100
BseMII CTCAG 2 cut(s) 9, 157
BseNI ACTGG 1 cut(s) 94
BseRI GAGGAG 2 cut(s) 131, 311
BseXI GCAGC 4 cut(s) 71, 138, 224, 298
BsiSI CCGG 2 cut(s) 230, 327
BslFI GGGAC 1 cut(s) 193
BslI CCNNNNNNNGG 1 cut(s) 100
BsmFI GGGAC 1 cut(s) 193
Bsp143I GATC 1 cut(s) 90
BspACI CCGC 2 cut(s) 41, 272
BspCNI CTCAG 2 cut(s) 10, 156
BspLI GGNNCC 2 cut(s) 57, 372
BspPI GGATC 1 cut(s) 85
BsrFI RCCGGY 1 cut(s) 229
BsrI ACTGG 1 cut(s) 94
BssAI RCCGGY 1 cut(s) 229
BssECI CCNNGG 1 cut(s) 366
BssMI GATC 1 cut(s) 90
BssT1I CCWWGG 1 cut(s) 366
Bst4CI ACNGT 2 cut(s) 208, 263
Bst6I CTCTTC 1 cut(s) 288
BstBAI YACGTR 1 cut(s) 187
BstC8I GCNNGC 1 cut(s) 231
BstDEI CTNAG 3 cut(s) 18, 28, 143
BstF5I GGATG 2 cut(s) 9, 286
BstKTI GATC 1 cut(s) 93
BstMBI GATC 1 cut(s) 90
BstMWI GCNNNNNNNGC 1 cut(s) 73
BstSCI CCNGG 1 cut(s) 326
BstSNI TACGTA 1 cut(s) 187
BstV1I GCAGC 4 cut(s) 71, 138, 224, 298
BtgZI GCGATG 1 cut(s) 185
BtsCI GGATG 2 cut(s) 9, 286
BtsIMutI CAGTG 1 cut(s) 268
Cac8I GCNNGC 1 cut(s) 231
Cfr10I RCCGGY 1 cut(s) 229
CseI GACGC 2 cut(s) 159, 164
Csp6I GTAC 1 cut(s) 188
CviAII CATG 2 cut(s) 80, 88
CviJI RGCY 8 cut(s) 84, 129, 215, 222, 229, 233, 344, 382
CviKI_1 RGCY 8 cut(s) 84, 129, 215, 222, 229, 233, 344, 382
CviQI GTAC 1 cut(s) 188
DdeI CTNAG 3 cut(s) 18, 28, 143
DpnI GATC 1 cut(s) 92
DpnII GATC 1 cut(s) 90
Eam1104I CTCTTC 1 cut(s) 288
EarI CTCTTC 1 cut(s) 288
Eco105I TACGTA 1 cut(s) 187
Eco130I CCWWGG 1 cut(s) 366
Eco57I CTGAAG 1 cut(s) 368
EcoT14I CCWWGG 1 cut(s) 366
ErhI CCWWGG 1 cut(s) 366
FaeI CATG 2 cut(s) 83, 91
FaiI YATR 7 cut(s) 81, 89, 116, 184, 240, 318, 385
FaqI GGGAC 1 cut(s) 193
FatI CATG 2 cut(s) 79, 87
Fnu4HI GCNGC 4 cut(s) 85, 127, 213, 312
FokI GGATG 1 cut(s) 293
Fsp4HI GCNGC 4 cut(s) 85, 127, 213, 312
FspBI CTAG 1 cut(s) 191
GluI GCNGC 4 cut(s) 85, 127, 213, 312
HapII CCGG 2 cut(s) 230, 327
HgaI GACGC 2 cut(s) 159, 164
Hin1II CATG 2 cut(s) 83, 91
HinfI GANTC 1 cut(s) 337
HpaII CCGG 2 cut(s) 230, 327
Hpy188I TCNGA 1 cut(s) 146
Hpy188III TCNNGA 1 cut(s) 278
HpyCH4III ACNGT 2 cut(s) 208, 263
HpyCH4IV ACGT 2 cut(s) 6, 186
HpyCH4V TGCA 1 cut(s) 87
HpyF10VI GCNNNNNNNGC 1 cut(s) 73
HpyF3I CTNAG 3 cut(s) 18, 28, 143
HpySE526I ACGT 2 cut(s) 6, 186
Hsp92II CATG 2 cut(s) 83, 91
KroI GCCGGC 1 cut(s) 229
KroNI GCCGGC 1 cut(s) 231
Kzo9I GATC 1 cut(s) 90
LmnI GCTCC 1 cut(s) 330
LpnPI CCDG 8 cut(s) 26, 30, 107, 243, 263, 340, 354, 359
Lsp1109I GCAGC 4 cut(s) 71, 138, 224, 298
LweI GCATC 1 cut(s) 145
MaeI CTAG 1 cut(s) 191
MaeII ACGT 2 cut(s) 6, 186
MaeIII GTNAC 1 cut(s) 257
MalI GATC 1 cut(s) 92
MboI GATC 1 cut(s) 90
MboII GAAGA 2 cut(s) 278, 305
MluCI AATT 1 cut(s) 360
MnlI CCTC 4 cut(s) 69, 112, 152, 289
MroNI GCCGGC 1 cut(s) 229
MroXI GAANNNNTTC 1 cut(s) 273
MseI TTAA 1 cut(s) 33
MslI CAYNNNNRTG 1 cut(s) 119
MspI CCGG 2 cut(s) 230, 327
MspR9I CCNGG 1 cut(s) 328
MwoI GCNNNNNNNGC 1 cut(s) 73
NaeI GCCGGC 1 cut(s) 231
NciI CCSGG 1 cut(s) 328
NdeII GATC 1 cut(s) 90
NgoMIV GCCGGC 1 cut(s) 229
NlaIII CATG 2 cut(s) 83, 91
NlaIV GGNNCC 2 cut(s) 57, 372
NmuCI GTSAC 1 cut(s) 257
PdiI GCCGGC 1 cut(s) 231
PdmI GAANNNNTTC 1 cut(s) 273
PfeI GAWTC 1 cut(s) 337
PflMI CCANNNNNTGG 1 cut(s) 100
PkrI GCNGC 4 cut(s) 86, 128, 214, 313
Ppu21I YACGTR 1 cut(s) 187
PspN4I GGNNCC 2 cut(s) 57, 372
RsaI GTAC 1 cut(s) 189
RsaNI GTAC 1 cut(s) 188
RseI CAYNNNNRTG 1 cut(s) 119
SaqAI TTAA 1 cut(s) 33
SatI GCNGC 4 cut(s) 85, 127, 213, 312
Sau3AI GATC 1 cut(s) 90
ScrFI CCNGG 1 cut(s) 328
SetI ASST 9 cut(s) 9, 61, 123, 131, 189, 224, 239, 376, 384
SfaNI GCATC 1 cut(s) 145
SmiMI CAYNNNNRTG 1 cut(s) 119
SmlI CTYRAG 1 cut(s) 217
SmoI CTYRAG 1 cut(s) 217
SnaBI TACGTA 1 cut(s) 187
Sse9I AATT 1 cut(s) 360
SsiI CCGC 2 cut(s) 41, 272
SspMI CTAG 1 cut(s) 191
StyD4I CCNGG 1 cut(s) 326
StyI CCWWGG 1 cut(s) 366
TaaI ACNGT 2 cut(s) 208, 263
TaiI ACGT 2 cut(s) 9, 189
TaqI TCGA 1 cut(s) 132
TasI AATT 1 cut(s) 360
TfiI GAWTC 1 cut(s) 337
Tru1I TTAA 1 cut(s) 33
Tru9I TTAA 1 cut(s) 33
TscAI CASTG 1 cut(s) 268
TseFI GTSAC 1 cut(s) 257
TseI GCWGC 4 cut(s) 84, 126, 212, 311
Tsp45I GTSAC 1 cut(s) 257
TspDTI ATGAA 1 cut(s) 333
TspRI CASTG 1 cut(s) 268
Van91I CCANNNNNTGG 1 cut(s) 100
XapI RAATTY 1 cut(s) 360
XmnI GAANNNNTTC 1 cut(s) 273
XspI CTAG 1 cut(s) 191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.