No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 294 |
| AccB1I | GGYRCC | 1 cut(s) | 322 |
| AccBSI | CCGCTC | 1 cut(s) | 880 |
| AccI | GTMKAC | 1 cut(s) | 44 |
| AccII | CGCG | 4 cut(s) | 169, 214, 599, 745 |
| AciI | CCGC | 9 cut(s) | 23, 214, 286, 356, 397, 416, 438, 725, 878 |
| AclI | AACGTT | 1 cut(s) | 617 |
| AclWI | GGATC | 4 cut(s) | 165, 224, 407, 523 |
| AcoI | YGGCCR | 1 cut(s) | 20 |
| AcuI | CTGAAG | 2 cut(s) | 50, 485 |
| AcyI | GRCGYC | 1 cut(s) | 323 |
| AfaI | GTAC | 1 cut(s) | 790 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 501 |
| AgsI | TTSAA | 4 cut(s) | 330, 373, 387, 492 |
| AjnI | CCWGG | 2 cut(s) | 223, 684 |
| AluBI | AGCT | 3 cut(s) | 340, 369, 836 |
| AluI | AGCT | 3 cut(s) | 340, 369, 836 |
| Alw26I | GTCTC | 1 cut(s) | 154 |
| AlwI | GGATC | 4 cut(s) | 165, 224, 407, 523 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 760, 772 |
| AoxI | GGCC | 5 cut(s) | 20, 56, 449, 605, 671 |
| ApeKI | GCWGC | 4 cut(s) | 267, 300, 643, 689 |
| AspLEI | GCGC | 4 cut(s) | 272, 325, 336, 599 |
| AspS9I | GGNCC | 1 cut(s) | 449 |
| AsuC2I | CCSGG | 1 cut(s) | 139 |
| AsuHPI | GGTGA | 3 cut(s) | 19, 115, 519 |
| AsuII | TTCGAA | 1 cut(s) | 127 |
| BanI | GGYRCC | 1 cut(s) | 322 |
| BbvI | GCAGC | 4 cut(s) | 279, 312, 630, 701 |
| BccI | CCATC | 5 cut(s) | 160, 201, 203, 439, 660 |
| BceAI | ACGGC | 1 cut(s) | 546 |
| BciT130I | CCWGG | 2 cut(s) | 225, 686 |
| BciVI | GTATCC | 1 cut(s) | 871 |
| BcnI | CCSGG | 1 cut(s) | 139 |
| BcoDI | GTCTC | 1 cut(s) | 154 |
| BfaI | CTAG | 2 cut(s) | 296, 566 |
| BfmI | CTRYAG | 3 cut(s) | 92, 392, 905 |
| BfoI | RGCGCY | 1 cut(s) | 326 |
| BfuAI | ACCTGC | 1 cut(s) | 294 |
| BfuI | GTATCC | 1 cut(s) | 871 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 331, 457 |
| BglII | AGATCT | 1 cut(s) | 432 |
| BisI | GCNGC | 5 cut(s) | 23, 268, 301, 644, 690 |
| BlsI | GCNGC | 5 cut(s) | 24, 269, 302, 645, 691 |
| Bme1390I | CCNGG | 3 cut(s) | 139, 225, 686 |
| BmgT120I | GGNCC | 1 cut(s) | 449 |
| BmiI | GGNNCC | 3 cut(s) | 250, 324, 450 |
| BmrFI | CCNGG | 3 cut(s) | 139, 225, 686 |
| BmsI | GCATC | 2 cut(s) | 427, 500 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 33 |
| Bpu14I | TTCGAA | 1 cut(s) | 127 |
| BpuMI | CCSGG | 1 cut(s) | 139 |
| Bsa29I | ATCGAT | 1 cut(s) | 155 |
| BsaHI | GRCGYC | 1 cut(s) | 323 |
| BsaJI | CCNNGG | 3 cut(s) | 224, 543, 674 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 794, 824 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 501 |
| Bse1I | ACTGG | 1 cut(s) | 861 |
| BseBI | CCWGG | 2 cut(s) | 225, 686 |
| BseCI | ATCGAT | 1 cut(s) | 155 |
| BseDI | CCNNGG | 3 cut(s) | 224, 543, 674 |
| BseGI | GGATG | 1 cut(s) | 450 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 501 |
| BseMII | CTCAG | 1 cut(s) | 16 |
| BseNI | ACTGG | 1 cut(s) | 861 |
| BseRI | GAGGAG | 1 cut(s) | 241 |
| BseX3I | CGGCCG | 1 cut(s) | 20 |
| BseXI | GCAGC | 4 cut(s) | 279, 312, 630, 701 |
| BseYI | CCCAGC | 1 cut(s) | 557 |
| Bsh1236I | CGCG | 4 cut(s) | 169, 214, 599, 745 |
| Bsh1285I | CGRYCG | 1 cut(s) | 23 |
| BshFI | GGCC | 5 cut(s) | 22, 58, 451, 607, 673 |
| BshNI | GGYRCC | 1 cut(s) | 322 |
| BshVI | ATCGAT | 1 cut(s) | 155 |
| BsiEI | CGRYCG | 1 cut(s) | 23 |
| BsiSI | CCGG | 1 cut(s) | 139 |
| BslFI | GGGAC | 1 cut(s) | 771 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 501 |
| BsmAI | GTCTC | 1 cut(s) | 154 |
| BsmFI | GGGAC | 1 cut(s) | 771 |
| BsnI | GGCC | 5 cut(s) | 22, 58, 451, 607, 673 |
| Bsp119I | TTCGAA | 1 cut(s) | 127 |
| Bsp143I | GATC | 6 cut(s) | 170, 216, 399, 432, 528, 866 |
| Bsp68I | TCGCGA | 2 cut(s) | 169, 745 |
| BspACI | CCGC | 9 cut(s) | 23, 214, 286, 356, 397, 416, 438, 725, 878 |
| BspANI | GGCC | 5 cut(s) | 22, 58, 451, 607, 673 |
| BspCNI | CTCAG | 1 cut(s) | 15 |
| BspDI | ATCGAT | 1 cut(s) | 155 |
| BspFNI | CGCG | 4 cut(s) | 169, 214, 599, 745 |
| BspLI | GGNNCC | 3 cut(s) | 250, 324, 450 |
| BspMAI | CTGCAG | 1 cut(s) | 909 |
| BspMI | ACCTGC | 1 cut(s) | 294 |
| BspPI | GGATC | 4 cut(s) | 165, 224, 407, 523 |
| BspT104I | TTCGAA | 1 cut(s) | 127 |
| BspT107I | GGYRCC | 1 cut(s) | 322 |
| BsrBI | CCGCTC | 1 cut(s) | 880 |
| BsrI | ACTGG | 1 cut(s) | 861 |
| BssECI | CCNNGG | 3 cut(s) | 224, 543, 674 |
| BssMI | GATC | 6 cut(s) | 170, 216, 399, 432, 528, 866 |
| BssNI | GRCGYC | 1 cut(s) | 323 |
| BssT1I | CCWWGG | 2 cut(s) | 543, 674 |
| Bst2UI | CCWGG | 2 cut(s) | 225, 686 |
| Bst4CI | ACNGT | 2 cut(s) | 93, 639 |
| Bst6I | CTCTTC | 3 cut(s) | 101, 107, 887 |
| BstACI | GRCGYC | 1 cut(s) | 323 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 760 |
| BstBI | TTCGAA | 1 cut(s) | 127 |
| BstC8I | GCNNGC | 4 cut(s) | 60, 64, 338, 671 |
| BstDEI | CTNAG | 1 cut(s) | 2 |
| BstF5I | GGATG | 1 cut(s) | 450 |
| BstFNI | CGCG | 4 cut(s) | 169, 214, 599, 745 |
| BstH2I | RGCGCY | 1 cut(s) | 326 |
| BstHHI | GCGC | 4 cut(s) | 272, 325, 336, 599 |
| BstKTI | GATC | 6 cut(s) | 173, 219, 402, 435, 531, 869 |
| BstMAI | GTCTC | 1 cut(s) | 154 |
| BstMBI | GATC | 6 cut(s) | 170, 216, 399, 432, 528, 866 |
| BstMCI | CGRYCG | 1 cut(s) | 23 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 220, 331, 457, 640, 751, 760 |
| BstNI | CCWGG | 2 cut(s) | 225, 686 |
| BstSCI | CCNGG | 3 cut(s) | 137, 223, 684 |
| BstSFI | CTRYAG | 3 cut(s) | 92, 392, 905 |
| BstUI | CGCG | 4 cut(s) | 169, 214, 599, 745 |
| BstV1I | GCAGC | 4 cut(s) | 279, 312, 630, 701 |
| BstX2I | RGATCY | 2 cut(s) | 216, 432 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 619 |
| BstYI | RGATCY | 2 cut(s) | 216, 432 |
| BstZI | CGGCCG | 1 cut(s) | 20 |
| Bsu15I | ATCGAT | 1 cut(s) | 155 |
| BsuI | GTATCC | 1 cut(s) | 871 |
| BsuRI | GGCC | 5 cut(s) | 22, 58, 451, 607, 673 |
| BsuTUI | ATCGAT | 1 cut(s) | 155 |
| BtgZI | GCGATG | 1 cut(s) | 181 |
| BtsCI | GGATG | 1 cut(s) | 450 |
| BtsIMutI | CAGTG | 1 cut(s) | 89 |
| BtuMI | TCGCGA | 2 cut(s) | 169, 745 |
| BveI | ACCTGC | 1 cut(s) | 294 |
| Cac8I | GCNNGC | 4 cut(s) | 60, 64, 338, 671 |
| CaiI | CAGNNNCTG | 2 cut(s) | 760, 772 |
| CfoI | GCGC | 4 cut(s) | 272, 325, 336, 599 |
| Cfr13I | GGNCC | 1 cut(s) | 449 |
| ClaI | ATCGAT | 1 cut(s) | 155 |
| CseI | GACGC | 3 cut(s) | 30, 220, 752 |
| Csp6I | GTAC | 1 cut(s) | 789 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 449, 484 |
| CviAII | CATG | 2 cut(s) | 273, 496 |
| CviQI | GTAC | 1 cut(s) | 789 |
| DdeI | CTNAG | 1 cut(s) | 2 |
| DinI | GGCGCC | 1 cut(s) | 324 |
| DpnI | GATC | 6 cut(s) | 172, 218, 401, 434, 530, 868 |
| DpnII | GATC | 6 cut(s) | 170, 216, 399, 432, 528, 866 |
| EaeI | YGGCCR | 1 cut(s) | 20 |
| EagI | CGGCCG | 1 cut(s) | 20 |
| Eam1104I | CTCTTC | 3 cut(s) | 101, 107, 887 |
| EarI | CTCTTC | 3 cut(s) | 101, 107, 887 |
| EclXI | CGGCCG | 1 cut(s) | 20 |
| Eco130I | CCWWGG | 2 cut(s) | 543, 674 |
| Eco147I | AGGCCT | 1 cut(s) | 673 |
| Eco52I | CGGCCG | 1 cut(s) | 20 |
| Eco57I | CTGAAG | 2 cut(s) | 50, 485 |
| EcoRII | CCWGG | 2 cut(s) | 223, 684 |
| EcoT14I | CCWWGG | 2 cut(s) | 543, 674 |
| EgeI | GGCGCC | 1 cut(s) | 324 |
| EheI | GGCGCC | 1 cut(s) | 324 |
| ErhI | CCWWGG | 2 cut(s) | 543, 674 |
| FaeI | CATG | 2 cut(s) | 276, 499 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 353, 385 |
| FaqI | GGGAC | 1 cut(s) | 771 |
| FatI | CATG | 2 cut(s) | 272, 495 |
| FblI | GTMKAC | 1 cut(s) | 44 |
| Fnu4HI | GCNGC | 5 cut(s) | 23, 268, 301, 644, 690 |
| FokI | GGATG | 1 cut(s) | 457 |
| Fsp4HI | GCNGC | 5 cut(s) | 23, 268, 301, 644, 690 |
| FspBI | CTAG | 2 cut(s) | 296, 566 |
| GlaI | GCGC | 4 cut(s) | 271, 324, 335, 598 |
| GluI | GCNGC | 5 cut(s) | 23, 268, 301, 644, 690 |
| GsaI | CCCAGC | 1 cut(s) | 561 |
| HaeII | RGCGCY | 1 cut(s) | 326 |
| HaeIII | GGCC | 5 cut(s) | 22, 58, 451, 607, 673 |
| HapII | CCGG | 1 cut(s) | 139 |
| HgaI | GACGC | 3 cut(s) | 30, 220, 752 |
| HhaI | GCGC | 4 cut(s) | 272, 325, 336, 599 |
| Hin1I | GRCGYC | 1 cut(s) | 323 |
| Hin1II | CATG | 2 cut(s) | 276, 499 |
| Hin6I | GCGC | 4 cut(s) | 270, 323, 334, 597 |
| HinP1I | GCGC | 4 cut(s) | 270, 323, 334, 597 |
| HincII | GTYRAC | 2 cut(s) | 45, 87 |
| HindII | GTYRAC | 2 cut(s) | 45, 87 |
| HinfI | GANTC | 2 cut(s) | 12, 276 |
| HpaII | CCGG | 1 cut(s) | 139 |
| HphI | GGTGA | 3 cut(s) | 19, 115, 519 |
| Hpy166II | GTNNAC | 3 cut(s) | 45, 87, 718 |
| Hpy188I | TCNGA | 3 cut(s) | 38, 243, 768 |
| Hpy188III | TCNNGA | 7 cut(s) | 168, 189, 744, 820, 830, 864, 870 |
| Hpy8I | GTNNAC | 3 cut(s) | 45, 87, 718 |
| Hpy99I | CGWCG | 3 cut(s) | 46, 190, 802 |
| HpyAV | CCTTC | 4 cut(s) | 25, 136, 324, 495 |
| HpyCH4III | ACNGT | 2 cut(s) | 93, 639 |
| HpyCH4IV | ACGT | 2 cut(s) | 185, 617 |
| HpyCH4V | TGCA | 5 cut(s) | 235, 477, 513, 844, 907 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 220, 331, 457, 640, 751, 760 |
| HpyF3I | CTNAG | 1 cut(s) | 2 |
| HpySE526I | ACGT | 2 cut(s) | 185, 617 |
| Hsp92I | GRCGYC | 1 cut(s) | 323 |
| Hsp92II | CATG | 2 cut(s) | 276, 499 |
| HspAI | GCGC | 4 cut(s) | 270, 323, 334, 597 |
| KasI | GGCGCC | 1 cut(s) | 322 |
| Kzo9I | GATC | 6 cut(s) | 170, 216, 399, 432, 528, 866 |
| LmnI | GCTCC | 4 cut(s) | 145, 254, 666, 802 |
| Lsp1109I | GCAGC | 4 cut(s) | 279, 312, 630, 701 |
| LweI | GCATC | 2 cut(s) | 427, 500 |
| MaeI | CTAG | 2 cut(s) | 296, 566 |
| MaeII | ACGT | 2 cut(s) | 185, 617 |
| MaeIII | GTNAC | 2 cut(s) | 306, 774 |
| MalI | GATC | 6 cut(s) | 172, 218, 401, 434, 530, 868 |
| MbiI | CCGCTC | 1 cut(s) | 880 |
| MboI | GATC | 6 cut(s) | 170, 216, 399, 432, 528, 866 |
| MboII | GAAGA | 5 cut(s) | 118, 124, 216, 617, 904 |
| MflI | RGATCY | 2 cut(s) | 216, 432 |
| MluCI | AATT | 2 cut(s) | 380, 487 |
| Mly113I | GGCGCC | 1 cut(s) | 323 |
| MlyI | GAGTC | 1 cut(s) | 270 |
| MnlI | CCTC | 7 cut(s) | 87, 102, 108, 262, 312, 498, 740 |
| MspI | CCGG | 1 cut(s) | 139 |
| MspR9I | CCNGG | 3 cut(s) | 139, 225, 686 |
| MvaI | CCWGG | 2 cut(s) | 225, 686 |
| MvnI | CGCG | 4 cut(s) | 169, 214, 599, 745 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 220, 331, 457, 640, 751, 760 |
| NarI | GGCGCC | 1 cut(s) | 323 |
| NciI | CCSGG | 1 cut(s) | 139 |
| NdeII | GATC | 6 cut(s) | 170, 216, 399, 432, 528, 866 |
| NlaIII | CATG | 2 cut(s) | 276, 499 |
| NlaIV | GGNNCC | 3 cut(s) | 250, 324, 450 |
| NmeAIII | GCCGAG | 1 cut(s) | 496 |
| NmuCI | GTSAC | 2 cut(s) | 306, 774 |
| NruI | TCGCGA | 2 cut(s) | 169, 745 |
| NspV | TTCGAA | 1 cut(s) | 127 |
| PceI | AGGCCT | 1 cut(s) | 673 |
| PfeI | GAWTC | 1 cut(s) | 12 |
| PflFI | GACNNNGTC | 1 cut(s) | 762 |
| PfoI | TCCNGGA | 1 cut(s) | 137 |
| PkrI | GCNGC | 5 cut(s) | 24, 269, 302, 645, 691 |
| PleI | GAGTC | 1 cut(s) | 270 |
| PluTI | GGCGCC | 1 cut(s) | 326 |
| PpsI | GAGTC | 1 cut(s) | 270 |
| Psp1406I | AACGTT | 1 cut(s) | 617 |
| Psp6I | CCWGG | 2 cut(s) | 223, 684 |
| PspFI | CCCAGC | 1 cut(s) | 557 |
| PspGI | CCWGG | 2 cut(s) | 223, 684 |
| PspN4I | GGNNCC | 3 cut(s) | 250, 324, 450 |
| PspPI | GGNCC | 1 cut(s) | 449 |
| PstI | CTGCAG | 1 cut(s) | 909 |
| PstNI | CAGNNNCTG | 2 cut(s) | 760, 772 |
| PsuI | RGATCY | 2 cut(s) | 216, 432 |
| PsyI | GACNNNGTC | 1 cut(s) | 762 |
| RruI | TCGCGA | 2 cut(s) | 169, 745 |
| RsaI | GTAC | 1 cut(s) | 790 |
| RsaNI | GTAC | 1 cut(s) | 789 |
| SalI | GTCGAC | 1 cut(s) | 43 |
| SatI | GCNGC | 5 cut(s) | 23, 268, 301, 644, 690 |
| Sau3AI | GATC | 6 cut(s) | 170, 216, 399, 432, 528, 866 |
| Sau96I | GGNCC | 1 cut(s) | 449 |
| SchI | GAGTC | 1 cut(s) | 270 |
| ScrFI | CCNGG | 3 cut(s) | 139, 225, 686 |
| SetI | ASST | 8 cut(s) | 36, 188, 308, 342, 371, 509, 620, 838 |
| SfaNI | GCATC | 2 cut(s) | 427, 500 |
| SfcI | CTRYAG | 3 cut(s) | 92, 392, 905 |
| SfoI | GGCGCC | 1 cut(s) | 324 |
| SfuI | TTCGAA | 1 cut(s) | 127 |
| Sse9I | AATT | 2 cut(s) | 380, 487 |
| SseBI | AGGCCT | 1 cut(s) | 673 |
| SsiI | CCGC | 9 cut(s) | 23, 214, 286, 356, 397, 416, 438, 725, 878 |
| SspDI | GGCGCC | 1 cut(s) | 322 |
| SspMI | CTAG | 2 cut(s) | 296, 566 |
| StuI | AGGCCT | 1 cut(s) | 673 |
| StyD4I | CCNGG | 3 cut(s) | 137, 223, 684 |
| StyI | CCWWGG | 2 cut(s) | 543, 674 |
| TaaI | ACNGT | 2 cut(s) | 93, 639 |
| TaiI | ACGT | 2 cut(s) | 188, 620 |
| TaqI | TCGA | 6 cut(s) | 44, 127, 155, 188, 263, 848 |
| TasI | AATT | 2 cut(s) | 380, 487 |
| TauI | GCSGC | 1 cut(s) | 25 |
| TfiI | GAWTC | 1 cut(s) | 12 |
| TscAI | CASTG | 1 cut(s) | 96 |
| TseFI | GTSAC | 2 cut(s) | 306, 774 |
| TseI | GCWGC | 4 cut(s) | 267, 300, 643, 689 |
| Tsp45I | GTSAC | 2 cut(s) | 306, 774 |
| TspDTI | ATGAA | 1 cut(s) | 617 |
| TspGWI | ACGGA | 2 cut(s) | 244, 815 |
| TspRI | CASTG | 1 cut(s) | 96 |
| Tth111I | GACNNNGTC | 1 cut(s) | 762 |
| XmiI | GTMKAC | 1 cut(s) | 44 |
| XspI | CTAG | 2 cut(s) | 296, 566 |