Rmu_sc0009844.1_g000014

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009844.1
OG0000057
Physical Location & Seq
Reverse (-)
34753 .. 36202
1450 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009844.1_g000014.1.cds

Sequence Viewer

Length: 1230 bp
atgattcagtcgatgggagaactcatcacggaggtcggtagttttgagcatctcctcagagagacagatgtgaggaagaatgcctccagaggaacgtacgtgccaggtaaacattgtactgtagcggccctgagctaccagccagccacttacgacccttattaccatcacaacactgaagaagcggtccaggatgatgaagaggtcgaagataatgacatagcggcttacgagttaaccgacaaaaagaatccgtccttgaaacagttgaagatttccaaggagcccgttaagctcaaatcgatggcctttaccaaaccggagtttgcgacatatacttacgacgccaataaggctcacgagatccttgacgagatgatcgttgcgaagatgctcaaagaccagattcaggtatggcttaataacggtagtttgcaggtagaggctccaatcacagcggcggcactagttgatgtagatccctttccagacactgggatcaacatggtcaatgtagagtggaccaatcagcagcgacggaaaccaactctggatttgggttcgagcgagcagagtgataggaagtcgagtagacatttctctttggctccctaccaccaatcaagtgggcttcgtcgtcgcggaactatcagccttccagtccaagagaaagggagaagacggaatcaccaccatccccagagactccaacttgttcatgaagctaaaagcagccgcaggcggttcgaaacgagaaaagaccaggccctacataccaagccctacataccacctccttcagctaatcctctcaaggagggcaaatggtacaccagggaaaagggcaaggtggtggagattagctcgtccaggaaaaggaagctacagcgcaggtttggtgaagccaagcgcgctctagaggctttagatcagggcctgatcaagccttcccaactagtcaagtcgcccgagcaataccagaaagagatggaagcgctggctgctaaaccattgagacctccccgtggttttaacaaacaaacagattcactaacaggggcctcaaagcccagtgtgttttgcaggattactgaggagcgctcaccacctcttactcgaatggagaactcgctaacgcggcggccacatgtcaagcgccggctcttccgtgaggcgccagtggtcaaagcttcggtctttgacaggctgggggggcaaggacagggctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

409

Amino Acids

46.64

Weight (kDa)

9.69

Isoelectric Point (pI)

58.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 427, 882
AccB1I GGYRCC 1 cut(s) 1174
AccB7I CCANNNNNTGG 1 cut(s) 494
AccI GTMKAC 1 cut(s) 592
AccII CGCG 3 cut(s) 642, 912, 1138
AclWI GGATC 3 cut(s) 358, 473, 506
AcoI YGGCCR 1 cut(s) 1142
AcuI CTGAAG 2 cut(s) 198, 783
AcyI GRCGYC 2 cut(s) 345, 1175
AfaI GTAC 3 cut(s) 98, 118, 830
AfeI AGCGCT 2 cut(s) 996, 1100
AfiI CCNNNNNNNGG 4 cut(s) 409, 494, 876, 1025
AflIII ACRYGT 1 cut(s) 1147
AgsI TTSAA 2 cut(s) 262, 271
AhlI ACTAGT 2 cut(s) 466, 955
AjnI CCWGG 5 cut(s) 103, 189, 762, 833, 869
AluBI AGCT 7 cut(s) 135, 295, 725, 803, 864, 883, 1190
AluI AGCT 7 cut(s) 135, 295, 725, 803, 864, 883, 1190
Alw26I GTCTC 3 cut(s) 56, 697, 1009
AlwI GGATC 3 cut(s) 358, 473, 506
AlwNI CAGNNNCTG 2 cut(s) 494, 937
Ama87I CYCGRG 1 cut(s) 968
Aor51HI AGCGCT 2 cut(s) 996, 1100
AoxI GGCC 6 cut(s) 126, 306, 765, 934, 1059, 1142
ApeKI GCWGC 3 cut(s) 532, 732, 1001
ArsI GACNNNNNNTTYG 2 cut(s) 1179, 1211
AspLEI GCGC 7 cut(s) 891, 912, 914, 997, 1101, 1158, 1177
AspS9I GGNCC 6 cut(s) 127, 187, 522, 766, 934, 1059
AsuHPI GGTGA 3 cut(s) 680, 911, 1095
AsuII TTCGAA 1 cut(s) 747
AvaI CYCGRG 1 cut(s) 968
AvaII GGWCC 2 cut(s) 187, 522
BanI GGYRCC 1 cut(s) 1174
BanII GRGCYC 1 cut(s) 288
BauI CACGAG 1 cut(s) 359
BbsI GAAGAC 1 cut(s) 685
BbvI GCAGC 3 cut(s) 544, 744, 988
BccI CCATC 5 cut(s) 7, 174, 298, 702, 982
BcgI CGANNNNNNTGC 2 cut(s) 727, 761
BciT130I CCWGG 5 cut(s) 105, 191, 764, 835, 871
BclI TGATCA 1 cut(s) 939
BcoDI GTCTC 3 cut(s) 56, 697, 1009
BcuI ACTAGT 2 cut(s) 466, 955
BfaI CTAG 4 cut(s) 467, 917, 956, 1228
BfmI CTRYAG 2 cut(s) 120, 884
BfoI RGCGCY 4 cut(s) 998, 1102, 1159, 1178
BfuAI ACCTGC 2 cut(s) 427, 882
BglI GCCNNNNNGGC 1 cut(s) 353
Bme1390I CCNGG 5 cut(s) 105, 191, 764, 835, 871
Bme18I GGWCC 2 cut(s) 187, 522
BmeT110I CYCGRG 1 cut(s) 968
BmgT120I GGNCC 6 cut(s) 127, 187, 522, 766, 934, 1059
BmiI GGNNCC 5 cut(s) 285, 447, 609, 1060, 1176
BmrFI CCNGG 5 cut(s) 105, 191, 764, 835, 871
BmrI ACTGGG 2 cut(s) 504, 1065
BmsI GCATC 2 cut(s) 58, 381
BmuI ACTGGG 2 cut(s) 504, 1065
BpiI GAAGAC 1 cut(s) 685
BplI GAGNNNNNCTC 4 cut(s) 848, 880, 1085, 1117
BpmI CTGGAG 1 cut(s) 70
Bpu10I CCTNAGC 1 cut(s) 131
Bpu14I TTCGAA 1 cut(s) 747
BpuEI CTTGAG 1 cut(s) 797
Bsa29I ATCGAT 1 cut(s) 302
BsaAI YACGTR 1 cut(s) 100
BsaBI GATNNNNATC 1 cut(s) 477
BsaHI GRCGYC 2 cut(s) 345, 1175
BsaI GGTCTC 1 cut(s) 1009
BsaJI CCNNGG 3 cut(s) 279, 834, 1024
BsaWI WCCGGW 1 cut(s) 319
Bsc4I CCNNNNNNNGG 4 cut(s) 409, 494, 876, 1025
Bse118I RCCGGY 1 cut(s) 1158
Bse1I ACTGG 4 cut(s) 499, 659, 1071, 1178
Bse8I GATNNNNATC 1 cut(s) 477
BseBI CCWGG 5 cut(s) 105, 191, 764, 835, 871
BseCI ATCGAT 1 cut(s) 302
BseDI CCNNGG 3 cut(s) 279, 834, 1024
BseGI GGATG 2 cut(s) 199, 694
BseJI GATNNNNATC 1 cut(s) 477
BseLI CCNNNNNNNGG 4 cut(s) 409, 494, 876, 1025
BseMII CTCAG 3 cut(s) 70, 122, 1083
BseNI ACTGG 4 cut(s) 499, 659, 1071, 1178
BsePI GCGCGC 1 cut(s) 910
BseRI GAGGAG 2 cut(s) 44, 1109
BseXI GCAGC 3 cut(s) 544, 744, 988
BseYI CCCAGC 1 cut(s) 1207
Bsh1236I CGCG 3 cut(s) 642, 912, 1138
BshFI GGCC 6 cut(s) 128, 308, 767, 936, 1061, 1144
BshNI GGYRCC 1 cut(s) 1174
BshVI ATCGAT 1 cut(s) 302
BsiHKCI CYCGRG 1 cut(s) 968
BsiSI CCGG 2 cut(s) 320, 1159
BsiWI CGTACG 1 cut(s) 96
BslI CCNNNNNNNGG 4 cut(s) 409, 494, 876, 1025
BsmAI GTCTC 3 cut(s) 56, 697, 1009
BsmI GAATGC 1 cut(s) 85
BsnI GGCC 6 cut(s) 128, 308, 767, 936, 1061, 1144
Bso31I GGTCTC 1 cut(s) 1009
BsoBI CYCGRG 1 cut(s) 968
Bsp119I TTCGAA 1 cut(s) 747
Bsp1286I GDGCHC 1 cut(s) 288
Bsp143I GATC 6 cut(s) 363, 378, 478, 498, 928, 939
BspANI GGCC 6 cut(s) 128, 308, 767, 936, 1061, 1144
BspCNI CTCAG 3 cut(s) 69, 123, 1084
BspDI ATCGAT 1 cut(s) 302
BspFNI CGCG 3 cut(s) 642, 912, 1138
BspHI TCATGA 1 cut(s) 718
BspLI GGNNCC 5 cut(s) 285, 447, 609, 1060, 1176
BspMI ACCTGC 2 cut(s) 427, 882
BspPI GGATC 3 cut(s) 358, 473, 506
BspQI GCTCTTC 1 cut(s) 1169
BspT104I TTCGAA 1 cut(s) 747
BspT107I GGYRCC 1 cut(s) 1174
BspTNI GGTCTC 1 cut(s) 1009
BsrFI RCCGGY 1 cut(s) 1158
BsrI ACTGG 4 cut(s) 499, 659, 1071, 1178
BssAI RCCGGY 1 cut(s) 1158
BssECI CCNNGG 3 cut(s) 279, 834, 1024
BssHII GCGCGC 1 cut(s) 910
BssMI GATC 6 cut(s) 363, 378, 478, 498, 928, 939
BssNI GRCGYC 2 cut(s) 345, 1175
BssSI CACGAG 1 cut(s) 359
BssT1I CCWWGG 1 cut(s) 279
Bst2BI CACGAG 1 cut(s) 359
Bst2UI CCWGG 5 cut(s) 105, 191, 764, 835, 871
Bst4CI ACNGT 3 cut(s) 121, 267, 428
Bst6I CTCTTC 2 cut(s) 195, 1169
BstACI GRCGYC 2 cut(s) 345, 1175
BstBAI YACGTR 1 cut(s) 100
BstBI TTCGAA 1 cut(s) 747
BstC8I GCNNGC 6 cut(s) 144, 569, 740, 912, 999, 1160
BstDEI CTNAG 3 cut(s) 56, 131, 1092
BstDSI CCRYGG 1 cut(s) 1024
BstF5I GGATG 2 cut(s) 199, 694
BstFNI CGCG 3 cut(s) 642, 912, 1138
BstH2I RGCGCY 4 cut(s) 998, 1102, 1159, 1178
BstHHI GCGC 7 cut(s) 891, 912, 914, 997, 1101, 1158, 1177
BstKTI GATC 6 cut(s) 366, 381, 481, 501, 931, 942
BstMAI GTCTC 3 cut(s) 56, 697, 1009
BstMBI GATC 6 cut(s) 363, 378, 478, 498, 928, 939
BstMWI GCNNNNNNNGC 7 cut(s) 292, 353, 911, 920, 1001, 1138, 1213
BstNI CCWGG 5 cut(s) 105, 191, 764, 835, 871
BstNSI RCATGY 1 cut(s) 1151
BstSCI CCNGG 5 cut(s) 103, 189, 762, 833, 869
BstSFI CTRYAG 2 cut(s) 120, 884
BstUI CGCG 3 cut(s) 642, 912, 1138
BstV1I GCAGC 3 cut(s) 544, 744, 988
BstV2I GAAGAC 1 cut(s) 685
BstX2I RGATCY 2 cut(s) 363, 478
BstXI CCANNNNNNTGG 1 cut(s) 626
BstYI RGATCY 2 cut(s) 363, 478
Bsu15I ATCGAT 1 cut(s) 302
BsuRI GGCC 6 cut(s) 128, 308, 767, 936, 1061, 1144
BsuTUI ATCGAT 1 cut(s) 302
BtgI CCRYGG 1 cut(s) 1024
BtsCI GGATG 2 cut(s) 199, 694
BtsIMutI CAGTG 4 cut(s) 174, 492, 1078, 1185
BveI ACCTGC 2 cut(s) 427, 882
Cac8I GCNNGC 6 cut(s) 144, 569, 740, 912, 999, 1160
CaiI CAGNNNCTG 2 cut(s) 494, 937
CciI TCATGA 1 cut(s) 718
CfoI GCGC 7 cut(s) 891, 912, 914, 997, 1101, 1158, 1177
Cfr10I RCCGGY 1 cut(s) 1158
Cfr13I GGNCC 6 cut(s) 127, 187, 522, 766, 934, 1059
ClaI ATCGAT 1 cut(s) 302
CseI GACGC 1 cut(s) 353
Csp6I GTAC 3 cut(s) 97, 117, 829
CviAII CATG 3 cut(s) 505, 719, 1148
CviQI GTAC 3 cut(s) 97, 117, 829
DdeI CTNAG 3 cut(s) 56, 131, 1092
DinI GGCGCC 1 cut(s) 1176
DpnI GATC 6 cut(s) 365, 380, 480, 500, 930, 941
DpnII GATC 6 cut(s) 363, 378, 478, 498, 928, 939
EaeI YGGCCR 1 cut(s) 1142
Eam1104I CTCTTC 2 cut(s) 195, 1169
EarI CTCTTC 2 cut(s) 195, 1169
Eco130I CCWWGG 1 cut(s) 279
Eco24I GRGCYC 1 cut(s) 288
Eco31I GGTCTC 1 cut(s) 1009
Eco47I GGWCC 2 cut(s) 187, 522
Eco47III AGCGCT 2 cut(s) 996, 1100
Eco57I CTGAAG 2 cut(s) 198, 783
Eco88I CYCGRG 1 cut(s) 968
EcoO109I RGGNCCY 3 cut(s) 766, 934, 1059
EcoRII CCWGG 5 cut(s) 103, 189, 762, 833, 869
EcoT14I CCWWGG 1 cut(s) 279
EcoT38I GRGCYC 1 cut(s) 288
EgeI GGCGCC 1 cut(s) 1176
EheI GGCGCC 1 cut(s) 1176
ErhI CCWWGG 1 cut(s) 279
FaeI CATG 3 cut(s) 508, 722, 1151
FaiI YATR 9 cut(s) 221, 334, 336, 415, 506, 720, 774, 788, 1149
FatI CATG 3 cut(s) 504, 718, 1147
FbaI TGATCA 1 cut(s) 939
FblI GTMKAC 1 cut(s) 592
FokI GGATG 2 cut(s) 206, 681
FriOI GRGCYC 1 cut(s) 288
FspBI CTAG 4 cut(s) 467, 917, 956, 1228
GlaI GCGC 7 cut(s) 890, 911, 913, 996, 1100, 1157, 1176
GsaI CCCAGC 1 cut(s) 1211
GsuI CTGGAG 1 cut(s) 70
HaeII RGCGCY 4 cut(s) 998, 1102, 1159, 1178
HaeIII GGCC 6 cut(s) 128, 308, 767, 936, 1061, 1144
HapII CCGG 2 cut(s) 320, 1159
HgaI GACGC 1 cut(s) 353
HhaI GCGC 7 cut(s) 891, 912, 914, 997, 1101, 1158, 1177
Hin1I GRCGYC 2 cut(s) 345, 1175
Hin1II CATG 3 cut(s) 508, 722, 1151
Hin6I GCGC 7 cut(s) 889, 910, 912, 995, 1099, 1156, 1175
HinP1I GCGC 7 cut(s) 889, 910, 912, 995, 1099, 1156, 1175
HincII GTYRAC 1 cut(s) 237
HindII GTYRAC 1 cut(s) 237
HindIII AAGCTT 1 cut(s) 1188
HinfI GANTC 6 cut(s) 4, 250, 406, 685, 705, 1046
HpaI GTTAAC 1 cut(s) 237
HpaII CCGG 2 cut(s) 320, 1159
HphI GGTGA 3 cut(s) 680, 911, 1095
Hpy166II GTNNAC 5 cut(s) 110, 237, 522, 593, 831
Hpy188I TCNGA 1 cut(s) 59
Hpy188III TCNNGA 6 cut(s) 87, 359, 488, 551, 719, 917
Hpy8I GTNNAC 5 cut(s) 110, 237, 522, 593, 831
Hpy99I CGWCG 4 cut(s) 347, 540, 639, 642
HpyAV CCTTC 3 cut(s) 665, 807, 957
HpyCH4III ACNGT 3 cut(s) 121, 267, 428
HpyCH4IV ACGT 2 cut(s) 95, 99
HpyCH4V TGCA 2 cut(s) 436, 1083
HpyF10VI GCNNNNNNNGC 7 cut(s) 292, 353, 911, 920, 1001, 1138, 1213
HpyF3I CTNAG 3 cut(s) 56, 131, 1092
HpySE526I ACGT 2 cut(s) 95, 99
Hsp92I GRCGYC 2 cut(s) 345, 1175
Hsp92II CATG 3 cut(s) 508, 722, 1151
HspAI GCGC 7 cut(s) 889, 910, 912, 995, 1099, 1156, 1175
KasI GGCGCC 1 cut(s) 1174
KroI GCCGGC 1 cut(s) 1158
KroNI GCCGGC 1 cut(s) 1160
Ksp22I TGATCA 1 cut(s) 939
KspAI GTTAAC 1 cut(s) 237
Kzo9I GATC 6 cut(s) 363, 378, 478, 498, 928, 939
LguI GCTCTTC 1 cut(s) 1169
LmnI GCTCC 4 cut(s) 283, 451, 613, 1096
Lsp1109I GCAGC 3 cut(s) 544, 744, 988
LweI GCATC 2 cut(s) 58, 381
MaeI CTAG 4 cut(s) 467, 917, 956, 1228
MaeII ACGT 2 cut(s) 95, 99
MalI GATC 6 cut(s) 365, 380, 480, 500, 930, 941
MboI GATC 6 cut(s) 363, 378, 478, 498, 928, 939
MboII GAAGA 8 cut(s) 88, 191, 212, 221, 283, 400, 690, 1156
MflI RGATCY 2 cut(s) 363, 478
MhlI GDGCHC 1 cut(s) 288
Mly113I GGCGCC 1 cut(s) 1175
MlyI GAGTC 1 cut(s) 699
MmeI TCCRAC 1 cut(s) 733
MroNI GCCGGC 1 cut(s) 1158
MseI TTAA 4 cut(s) 236, 291, 420, 1032
MspA1I CMGCKG 1 cut(s) 458
MspI CCGG 2 cut(s) 320, 1159
MspR9I CCNGG 5 cut(s) 105, 191, 764, 835, 871
Mva1269I GAATGC 1 cut(s) 85
MvaI CCWGG 5 cut(s) 105, 191, 764, 835, 871
MvnI CGCG 3 cut(s) 642, 912, 1138
MwoI GCNNNNNNNGC 7 cut(s) 292, 353, 911, 920, 1001, 1138, 1213
NaeI GCCGGC 1 cut(s) 1160
NarI GGCGCC 1 cut(s) 1175
NdeII GATC 6 cut(s) 363, 378, 478, 498, 928, 939
NgoMIV GCCGGC 1 cut(s) 1158
NlaIII CATG 3 cut(s) 508, 722, 1151
NlaIV GGNNCC 5 cut(s) 285, 447, 609, 1060, 1176
NspI RCATGY 1 cut(s) 1151
NspV TTCGAA 1 cut(s) 747
PagI TCATGA 1 cut(s) 718
PauI GCGCGC 1 cut(s) 910
PciI ACATGT 1 cut(s) 1147
PciSI GCTCTTC 1 cut(s) 1169
PcsI WCGNNNNNNNCGW 2 cut(s) 237, 378
PctI GAATGC 1 cut(s) 85
PdiI GCCGGC 1 cut(s) 1160
PfeI GAWTC 5 cut(s) 4, 250, 406, 685, 1046
Pfl23II CGTACG 1 cut(s) 96
PflMI CCANNNNNTGG 1 cut(s) 494
PfoI TCCNGGA 2 cut(s) 189, 869
PleI GAGTC 1 cut(s) 699
PluTI GGCGCC 1 cut(s) 1178
PpsI GAGTC 1 cut(s) 699
Ppu21I YACGTR 1 cut(s) 100
PscI ACATGT 1 cut(s) 1147
Psp6I CCWGG 5 cut(s) 103, 189, 762, 833, 869
PspFI CCCAGC 1 cut(s) 1207
PspGI CCWGG 5 cut(s) 103, 189, 762, 833, 869
PspLI CGTACG 1 cut(s) 96
PspN4I GGNNCC 5 cut(s) 285, 447, 609, 1060, 1176
PspPI GGNCC 6 cut(s) 127, 187, 522, 766, 934, 1059
PstNI CAGNNNCTG 2 cut(s) 494, 937
PsuI RGATCY 2 cut(s) 363, 478
PteI GCGCGC 1 cut(s) 910
RsaI GTAC 3 cut(s) 98, 118, 830
RsaNI GTAC 3 cut(s) 97, 117, 829
SapI GCTCTTC 1 cut(s) 1169
SaqAI TTAA 4 cut(s) 236, 291, 420, 1032
Sau3AI GATC 6 cut(s) 363, 378, 478, 498, 928, 939
Sau96I GGNCC 6 cut(s) 127, 187, 522, 766, 934, 1059
SchI GAGTC 1 cut(s) 699
ScrFI CCNGG 5 cut(s) 105, 191, 764, 835, 871
SduI GDGCHC 1 cut(s) 288
SfaNI GCATC 2 cut(s) 58, 381
SfcI CTRYAG 2 cut(s) 120, 884
SfoI GGCGCC 1 cut(s) 1176
SfuI TTCGAA 1 cut(s) 747
SinI GGWCC 2 cut(s) 187, 522
SmlI CTYRAG 1 cut(s) 812
SmoI CTYRAG 1 cut(s) 812
SpeI ACTAGT 2 cut(s) 466, 955
SspDI GGCGCC 1 cut(s) 1174
SspMI CTAG 4 cut(s) 467, 917, 956, 1228
StyD4I CCNGG 5 cut(s) 103, 189, 762, 833, 869
StyI CCWWGG 1 cut(s) 279
TaaI ACNGT 3 cut(s) 121, 267, 428
TaiI ACGT 2 cut(s) 98, 102
TaqI TCGA 7 cut(s) 11, 207, 302, 563, 587, 747, 1117
TaqII GACCGA 1 cut(s) 1183
TatI WGTACW 1 cut(s) 116
TauI GCSGC 7 cut(s) 128, 227, 461, 464, 738, 1141, 1144
TfiI GAWTC 5 cut(s) 4, 250, 406, 685, 1046
Tru1I TTAA 4 cut(s) 236, 291, 420, 1032
Tru9I TTAA 4 cut(s) 236, 291, 420, 1032
TscAI CASTG 4 cut(s) 181, 499, 1078, 1185
TseI GCWGC 3 cut(s) 532, 732, 1001
TspDTI ATGAA 3 cut(s) 213, 707, 735
TspGWI ACGGA 5 cut(s) 44, 243, 553, 697, 1157
TspRI CASTG 4 cut(s) 181, 499, 1078, 1185
Van91I CCANNNNNTGG 1 cut(s) 494
VpaK11BI GGWCC 2 cut(s) 187, 522
XbaI TCTAGA 1 cut(s) 916
XceI RCATGY 1 cut(s) 1151
XcmI CCANNNNNNNNNTGG 1 cut(s) 623
XmiI GTMKAC 1 cut(s) 592
XspI CTAG 4 cut(s) 467, 917, 956, 1228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.