DWNN domain, A CCHC-type zinc finger protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 797 |
| AccB1I | GGYRCC | 1 cut(s) | 797 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 596 |
| AccI | GTMKAC | 1 cut(s) | 93 |
| AccII | CGCG | 2 cut(s) | 162, 323 |
| AciI | CCGC | 3 cut(s) | 160, 302, 321 |
| AclWI | GGATC | 2 cut(s) | 276, 554 |
| AcoI | YGGCCR | 1 cut(s) | 460 |
| AfaI | GTAC | 2 cut(s) | 485, 799 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 554, 596, 881 |
| AgsI | TTSAA | 6 cut(s) | 235, 292, 397, 833, 839, 879 |
| AjnI | CCWGG | 2 cut(s) | 399, 909 |
| AluBI | AGCT | 3 cut(s) | 154, 245, 665 |
| AluI | AGCT | 3 cut(s) | 154, 245, 665 |
| Alw26I | GTCTC | 1 cut(s) | 897 |
| AlwI | GGATC | 2 cut(s) | 276, 554 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 665 |
| AoxI | GGCC | 5 cut(s) | 354, 423, 460, 510, 674 |
| ApeKI | GCWGC | 3 cut(s) | 172, 205, 257 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 511, 543 |
| Asp718I | GGTACC | 1 cut(s) | 797 |
| AspLEI | GCGC | 2 cut(s) | 241, 917 |
| AspS9I | GGNCC | 3 cut(s) | 354, 433, 937 |
| AsuC2I | CCSGG | 2 cut(s) | 44, 202 |
| AsuHPI | GGTGA | 3 cut(s) | 23, 569, 628 |
| AsuII | TTCGAA | 1 cut(s) | 32 |
| AvaII | GGWCC | 2 cut(s) | 433, 937 |
| AxyI | CCTNAGG | 1 cut(s) | 427 |
| BalI | TGGCCA | 1 cut(s) | 462 |
| BanI | GGYRCC | 1 cut(s) | 797 |
| BauI | CACGAG | 1 cut(s) | 503 |
| BbvI | GCAGC | 3 cut(s) | 184, 217, 244 |
| BccI | CCATC | 5 cut(s) | 106, 260, 344, 475, 782 |
| BciT130I | CCWGG | 2 cut(s) | 401, 911 |
| BciVI | GTATCC | 2 cut(s) | 715, 763 |
| BcnI | CCSGG | 2 cut(s) | 44, 202 |
| BcoDI | GTCTC | 1 cut(s) | 897 |
| BfmI | CTRYAG | 2 cut(s) | 258, 297 |
| BfoI | RGCGCY | 1 cut(s) | 918 |
| BfuI | GTATCC | 2 cut(s) | 715, 763 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 236, 362 |
| BglII | AGATCT | 1 cut(s) | 337 |
| BisI | GCNGC | 3 cut(s) | 173, 206, 258 |
| BlsI | GCNGC | 3 cut(s) | 174, 207, 259 |
| Bme1390I | CCNGG | 4 cut(s) | 44, 202, 401, 911 |
| Bme18I | GGWCC | 2 cut(s) | 433, 937 |
| BmgT120I | GGNCC | 3 cut(s) | 354, 433, 937 |
| BmiI | GGNNCC | 4 cut(s) | 355, 434, 435, 799 |
| BmrFI | CCNGG | 4 cut(s) | 44, 202, 401, 911 |
| Bpu14I | TTCGAA | 1 cut(s) | 32 |
| BpuMI | CCSGG | 2 cut(s) | 44, 202 |
| BsaAI | YACGTR | 1 cut(s) | 487 |
| BsaJI | CCNNGG | 3 cut(s) | 448, 612, 910 |
| BsaWI | WCCGGW | 1 cut(s) | 470 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 554, 596, 881 |
| Bse1I | ACTGG | 2 cut(s) | 601, 801 |
| Bse21I | CCTNAGG | 1 cut(s) | 427 |
| Bse3DI | GCAATG | 1 cut(s) | 893 |
| BseBI | CCWGG | 2 cut(s) | 401, 911 |
| BseDI | CCNNGG | 3 cut(s) | 448, 612, 910 |
| BseGI | GGATG | 2 cut(s) | 355, 467 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 554, 596, 881 |
| BseMI | GCAATG | 1 cut(s) | 893 |
| BseMII | CTCAG | 2 cut(s) | 360, 778 |
| BseNI | ACTGG | 2 cut(s) | 601, 801 |
| BseRI | GAGGAG | 1 cut(s) | 146 |
| BseXI | GCAGC | 3 cut(s) | 184, 217, 244 |
| BseYI | CCCAGC | 1 cut(s) | 818 |
| BsgI | GTGCAG | 1 cut(s) | 678 |
| Bsh1236I | CGCG | 2 cut(s) | 162, 323 |
| BshFI | GGCC | 5 cut(s) | 356, 425, 462, 512, 676 |
| BshNI | GGYRCC | 1 cut(s) | 797 |
| BsiSI | CCGG | 3 cut(s) | 44, 202, 471 |
| BslFI | GGGAC | 1 cut(s) | 446 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 554, 596, 881 |
| BsmAI | GTCTC | 1 cut(s) | 897 |
| BsmFI | GGGAC | 1 cut(s) | 446 |
| BsmI | GAATGC | 1 cut(s) | 600 |
| BsnI | GGCC | 5 cut(s) | 356, 425, 462, 512, 676 |
| Bsp119I | TTCGAA | 1 cut(s) | 32 |
| Bsp143I | GATC | 4 cut(s) | 268, 337, 559, 742 |
| Bsp19I | CCATGG | 1 cut(s) | 612 |
| BspACI | CCGC | 3 cut(s) | 160, 302, 321 |
| BspANI | GGCC | 5 cut(s) | 356, 425, 462, 512, 676 |
| BspCNI | CTCAG | 2 cut(s) | 361, 777 |
| BspFNI | CGCG | 2 cut(s) | 162, 323 |
| BspLI | GGNNCC | 4 cut(s) | 355, 434, 435, 799 |
| BspMAI | CTGCAG | 1 cut(s) | 262 |
| BspPI | GGATC | 2 cut(s) | 276, 554 |
| BspT104I | TTCGAA | 1 cut(s) | 32 |
| BspT107I | GGYRCC | 1 cut(s) | 797 |
| BsrDI | GCAATG | 1 cut(s) | 893 |
| BsrI | ACTGG | 2 cut(s) | 601, 801 |
| BssECI | CCNNGG | 3 cut(s) | 448, 612, 910 |
| BssMI | GATC | 4 cut(s) | 268, 337, 559, 742 |
| BssSI | CACGAG | 1 cut(s) | 503 |
| BssT1I | CCWWGG | 2 cut(s) | 448, 612 |
| Bst2BI | CACGAG | 1 cut(s) | 503 |
| Bst2UI | CCWGG | 2 cut(s) | 401, 911 |
| Bst4CI | ACNGT | 1 cut(s) | 884 |
| Bst6I | CTCTTC | 1 cut(s) | 12 |
| BstBAI | YACGTR | 1 cut(s) | 487 |
| BstBI | TTCGAA | 1 cut(s) | 32 |
| BstC8I | GCNNGC | 2 cut(s) | 243, 872 |
| BstDEI | CTNAG | 3 cut(s) | 369, 427, 764 |
| BstDSI | CCRYGG | 1 cut(s) | 612 |
| BstF5I | GGATG | 2 cut(s) | 355, 467 |
| BstFNI | CGCG | 2 cut(s) | 162, 323 |
| BstH2I | RGCGCY | 1 cut(s) | 918 |
| BstHHI | GCGC | 2 cut(s) | 241, 917 |
| BstKTI | GATC | 4 cut(s) | 271, 340, 562, 745 |
| BstMAI | GTCTC | 1 cut(s) | 897 |
| BstMBI | GATC | 4 cut(s) | 268, 337, 559, 742 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 236, 313, 362, 459, 824 |
| BstNI | CCWGG | 2 cut(s) | 401, 911 |
| BstNSI | RCATGY | 1 cut(s) | 874 |
| BstSCI | CCNGG | 4 cut(s) | 42, 200, 399, 909 |
| BstSFI | CTRYAG | 2 cut(s) | 258, 297 |
| BstUI | CGCG | 2 cut(s) | 162, 323 |
| BstV1I | GCAGC | 3 cut(s) | 184, 217, 244 |
| BstX2I | RGATCY | 1 cut(s) | 337 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 524, 613 |
| BstYI | RGATCY | 1 cut(s) | 337 |
| Bsu36I | CCTNAGG | 1 cut(s) | 427 |
| BsuI | GTATCC | 2 cut(s) | 715, 763 |
| BsuRI | GGCC | 5 cut(s) | 356, 425, 462, 512, 676 |
| BtgI | CCRYGG | 1 cut(s) | 612 |
| BtgZI | GCGATG | 2 cut(s) | 86, 238 |
| BtsCI | GGATG | 2 cut(s) | 355, 467 |
| BtsI | GCAGTG | 2 cut(s) | 541, 644 |
| BtsIMutI | CAGTG | 5 cut(s) | 541, 594, 644, 711, 807 |
| Cac8I | GCNNGC | 2 cut(s) | 243, 872 |
| CaiI | CAGNNNCTG | 1 cut(s) | 665 |
| CfoI | GCGC | 2 cut(s) | 241, 917 |
| Cfr13I | GGNCC | 3 cut(s) | 354, 433, 937 |
| CseI | GACGC | 3 cut(s) | 125, 263, 312 |
| Csp6I | GTAC | 2 cut(s) | 484, 798 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 354, 389 |
| CviAII | CATG | 4 cut(s) | 82, 613, 632, 871 |
| CviQI | GTAC | 2 cut(s) | 484, 798 |
| DdeI | CTNAG | 3 cut(s) | 369, 427, 764 |
| DpnI | GATC | 4 cut(s) | 270, 339, 561, 744 |
| DpnII | GATC | 4 cut(s) | 268, 337, 559, 742 |
| EaeI | YGGCCR | 1 cut(s) | 460 |
| Eam1104I | CTCTTC | 1 cut(s) | 12 |
| EarI | CTCTTC | 1 cut(s) | 12 |
| Eco130I | CCWWGG | 2 cut(s) | 448, 612 |
| Eco147I | AGGCCT | 1 cut(s) | 425 |
| Eco47I | GGWCC | 2 cut(s) | 433, 937 |
| Eco81I | CCTNAGG | 1 cut(s) | 427 |
| EcoO109I | RGGNCCY | 1 cut(s) | 433 |
| EcoRII | CCWGG | 2 cut(s) | 399, 909 |
| EcoT14I | CCWWGG | 2 cut(s) | 448, 612 |
| ErhI | CCWWGG | 2 cut(s) | 448, 612 |
| FaeI | CATG | 4 cut(s) | 85, 616, 635, 874 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 917, 949 |
| FaqI | GGGAC | 1 cut(s) | 446 |
| FatI | CATG | 4 cut(s) | 81, 612, 631, 870 |
| FauNDI | CATATG | 1 cut(s) | 640 |
| FblI | GTMKAC | 1 cut(s) | 93 |
| Fnu4HI | GCNGC | 3 cut(s) | 173, 206, 258 |
| FokI | GGATG | 2 cut(s) | 362, 454 |
| Fsp4HI | GCNGC | 3 cut(s) | 173, 206, 258 |
| GlaI | GCGC | 2 cut(s) | 240, 916 |
| GluI | GCNGC | 3 cut(s) | 173, 206, 258 |
| GsaI | CCCAGC | 1 cut(s) | 822 |
| HaeII | RGCGCY | 1 cut(s) | 918 |
| HaeIII | GGCC | 5 cut(s) | 356, 425, 462, 512, 676 |
| HapII | CCGG | 3 cut(s) | 44, 202, 471 |
| HgaI | GACGC | 3 cut(s) | 125, 263, 312 |
| HhaI | GCGC | 2 cut(s) | 241, 917 |
| Hin1II | CATG | 4 cut(s) | 85, 616, 635, 874 |
| Hin6I | GCGC | 2 cut(s) | 239, 915 |
| HinP1I | GCGC | 2 cut(s) | 239, 915 |
| HincII | GTYRAC | 1 cut(s) | 94 |
| HindII | GTYRAC | 1 cut(s) | 94 |
| HinfI | GANTC | 5 cut(s) | 181, 760, 783, 791, 928 |
| HpaII | CCGG | 3 cut(s) | 44, 202, 471 |
| HphI | GGTGA | 3 cut(s) | 23, 569, 628 |
| Hpy166II | GTNNAC | 1 cut(s) | 94 |
| Hpy188I | TCNGA | 1 cut(s) | 148 |
| Hpy188III | TCNNGA | 4 cut(s) | 129, 563, 925, 956 |
| Hpy8I | GTNNAC | 1 cut(s) | 94 |
| Hpy99I | CGWCG | 1 cut(s) | 328 |
| HpyAV | CCTTC | 4 cut(s) | 41, 229, 502, 885 |
| HpyCH4III | ACNGT | 1 cut(s) | 884 |
| HpyCH4IV | ACGT | 1 cut(s) | 486 |
| HpyCH4V | TGCA | 7 cut(s) | 260, 345, 382, 644, 659, 737, 898 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 236, 313, 362, 459, 824 |
| HpyF3I | CTNAG | 3 cut(s) | 369, 427, 764 |
| HpySE526I | ACGT | 1 cut(s) | 486 |
| Hsp92II | CATG | 4 cut(s) | 85, 616, 635, 874 |
| HspAI | GCGC | 2 cut(s) | 239, 915 |
| KflI | GGGWCCC | 1 cut(s) | 433 |
| KpnI | GGTACC | 1 cut(s) | 801 |
| Kzo9I | GATC | 4 cut(s) | 268, 337, 559, 742 |
| LmnI | GCTCC | 2 cut(s) | 159, 304 |
| Lsp1109I | GCAGC | 3 cut(s) | 184, 217, 244 |
| MaeII | ACGT | 1 cut(s) | 486 |
| MaeIII | GTNAC | 3 cut(s) | 52, 247, 887 |
| MalI | GATC | 4 cut(s) | 270, 339, 561, 744 |
| MboI | GATC | 4 cut(s) | 268, 337, 559, 742 |
| MboII | GAAGA | 4 cut(s) | 26, 29, 121, 871 |
| MflI | RGATCY | 1 cut(s) | 337 |
| MlsI | TGGCCA | 1 cut(s) | 462 |
| MluCI | AATT | 4 cut(s) | 165, 285, 392, 685 |
| MluNI | TGGCCA | 1 cut(s) | 462 |
| MlyI | GAGTC | 3 cut(s) | 175, 754, 800 |
| MnlI | CCTC | 7 cut(s) | 13, 55, 89, 167, 364, 666, 706 |
| Mox20I | TGGCCA | 1 cut(s) | 462 |
| MscI | TGGCCA | 1 cut(s) | 462 |
| MseI | TTAA | 1 cut(s) | 966 |
| Msp20I | TGGCCA | 1 cut(s) | 462 |
| MspI | CCGG | 3 cut(s) | 44, 202, 471 |
| MspR9I | CCNGG | 4 cut(s) | 44, 202, 401, 911 |
| Mva1269I | GAATGC | 1 cut(s) | 600 |
| MvaI | CCWGG | 2 cut(s) | 401, 911 |
| MvnI | CGCG | 2 cut(s) | 162, 323 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 236, 313, 362, 459, 824 |
| NciI | CCSGG | 2 cut(s) | 44, 202 |
| NcoI | CCATGG | 1 cut(s) | 612 |
| NdeI | CATATG | 1 cut(s) | 640 |
| NdeII | GATC | 4 cut(s) | 268, 337, 559, 742 |
| NlaIII | CATG | 4 cut(s) | 85, 616, 635, 874 |
| NlaIV | GGNNCC | 4 cut(s) | 355, 434, 435, 799 |
| NmeAIII | GCCGAG | 1 cut(s) | 675 |
| NmuCI | GTSAC | 1 cut(s) | 887 |
| NspI | RCATGY | 1 cut(s) | 874 |
| NspV | TTCGAA | 1 cut(s) | 32 |
| PaeI | GCATGC | 1 cut(s) | 874 |
| PceI | AGGCCT | 1 cut(s) | 425 |
| PctI | GAATGC | 1 cut(s) | 600 |
| PfeI | GAWTC | 2 cut(s) | 783, 928 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 596 |
| PfoI | TCCNGGA | 1 cut(s) | 42 |
| PkrI | GCNGC | 3 cut(s) | 174, 207, 259 |
| PleI | GAGTC | 3 cut(s) | 175, 754, 799 |
| PpsI | GAGTC | 3 cut(s) | 175, 754, 799 |
| Ppu21I | YACGTR | 1 cut(s) | 487 |
| PpuMI | RGGWCCY | 1 cut(s) | 433 |
| Psp5II | RGGWCCY | 1 cut(s) | 433 |
| Psp6I | CCWGG | 2 cut(s) | 399, 909 |
| PspFI | CCCAGC | 1 cut(s) | 818 |
| PspGI | CCWGG | 2 cut(s) | 399, 909 |
| PspN4I | GGNNCC | 4 cut(s) | 355, 434, 435, 799 |
| PspPI | GGNCC | 3 cut(s) | 354, 433, 937 |
| PspPPI | RGGWCCY | 1 cut(s) | 433 |
| PstI | CTGCAG | 1 cut(s) | 262 |
| PstNI | CAGNNNCTG | 1 cut(s) | 665 |
| PsuI | RGATCY | 1 cut(s) | 337 |
| RsaI | GTAC | 2 cut(s) | 485, 799 |
| RsaNI | GTAC | 2 cut(s) | 484, 798 |
| SalI | GTCGAC | 1 cut(s) | 92 |
| SaqAI | TTAA | 1 cut(s) | 966 |
| SatI | GCNGC | 3 cut(s) | 173, 206, 258 |
| Sau3AI | GATC | 4 cut(s) | 268, 337, 559, 742 |
| Sau96I | GGNCC | 3 cut(s) | 354, 433, 937 |
| SchI | GAGTC | 3 cut(s) | 175, 754, 800 |
| ScrFI | CCNGG | 4 cut(s) | 44, 202, 401, 911 |
| SetI | ASST | 8 cut(s) | 10, 156, 247, 375, 489, 667, 698, 942 |
| SfcI | CTRYAG | 2 cut(s) | 258, 297 |
| SfuI | TTCGAA | 1 cut(s) | 32 |
| SinI | GGWCC | 2 cut(s) | 433, 937 |
| SphI | GCATGC | 1 cut(s) | 874 |
| Sse9I | AATT | 4 cut(s) | 165, 285, 392, 685 |
| SseBI | AGGCCT | 1 cut(s) | 425 |
| SsiI | CCGC | 3 cut(s) | 160, 302, 321 |
| StuI | AGGCCT | 1 cut(s) | 425 |
| StyD4I | CCNGG | 4 cut(s) | 42, 200, 399, 909 |
| StyI | CCWWGG | 2 cut(s) | 448, 612 |
| TaaI | ACNGT | 1 cut(s) | 884 |
| TaiI | ACGT | 1 cut(s) | 489 |
| TaqI | TCGA | 4 cut(s) | 32, 93, 326, 781 |
| TasI | AATT | 4 cut(s) | 165, 285, 392, 685 |
| TfiI | GAWTC | 2 cut(s) | 783, 928 |
| Tru1I | TTAA | 1 cut(s) | 966 |
| Tru9I | TTAA | 1 cut(s) | 966 |
| TscAI | CASTG | 5 cut(s) | 548, 601, 651, 711, 814 |
| TseFI | GTSAC | 1 cut(s) | 887 |
| TseI | GCWGC | 3 cut(s) | 172, 205, 257 |
| Tsp45I | GTSAC | 1 cut(s) | 887 |
| TspDTI | ATGAA | 1 cut(s) | 431 |
| TspGWI | ACGGA | 1 cut(s) | 206 |
| TspRI | CASTG | 5 cut(s) | 548, 601, 651, 711, 814 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 596 |
| VpaK11BI | GGWCC | 2 cut(s) | 433, 937 |
| XceI | RCATGY | 1 cut(s) | 874 |
| XmiI | GTMKAC | 1 cut(s) | 93 |