Rmu_sc0012742.1_g000005

Reverse transcriptase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012742.1
Physical Location & Seq
Forward (+)
23727 .. 25940
2214 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012742.1_g000005.1.cds

Sequence Viewer

Length: 1590 bp
atgggttatgtactgggagggaccgcggtaatgaactgttggaatggggaaacattttcgggggtcgactccgggatcggtgctgtttccaggactagcttgccgggagagtttgtcgggaggaaagtagcgagaggtttgatcagtgatcgcagatcgattccattatggatgagaggaagttgcccttttattgtagtgacgaccggagaagaaagcaagggtcgtgggtgcccagagaagatttctggtattgttagagaaataattgaaggaataaaggagccgaaagtgattcaaagattttatccccaccctccatcgatagagatgtcaactgaacaaggaggaaatcaacagggcgagaaagtttctgccgcccagcctaatcaggctggcgatacgtctagcatcacccaggtagccgcgagcgcagttacaactattgactttgtgcctattctcgttccagaaaatgcgaccatagaagagcggcttaatatccttcaacagaattctgctgcatactatgagaagatggaaaaagcccttgcagaggaccgtcgacggcttgatgagttcacaatctcggtcaagaggcttgagctaggggcacaacaaacacaaggtcaattggatggcatgaaccaaaaaatgcagaagaaccatgaagagctgttggtcgcaagcaaacacattgcaacagacatcgcggctatgcgtaaagatgggtccaatctcgcgacccaagtggccatgcagcaggccgaactgggacaggccaaggaggttctgaataaagcattgggagattccaatgccatcctgggttctcttggtcaatcagctggaacaggcaagtatgtaccgctgaatgctcgagacaaggtcagcagtagcactactacaccatatgctactgctacagccacgtctaccaaagccaaagaaaaagcattggtgattggtgacaaagacaaggccacaccaccggctggacaaaagagcaaaagtttgaaattcggcaacgacagtctggctgatcccgttgtgtttgctcaatatgatagtgatggggcagaaaatgtttaccaagagctcccagggaattactacgggattgatcagacgggcactccaatcaagatcactgctttggccaaggatgtgtccgcaccaggaattacacttcaacagcctaatattccccgggtcattcacatgggaggaatagcgactaccagccatgcgatgcctcctttgcaaacggcccatcagacggtggctgcaccttctcttcctggcccaggttatgtgcgacgtgaggaggtggaggaaatgattaggttggctaaccctagggcccacctcaatggggtttatgaagggcctttcccaccacacatcatgctcgcacctttccccagaggctataagaatatcatattttctactttttcaggagaagataccgagaacgcggcaactcatctggctaggttcaaggtgcaatgcggccagtaccagaatgatgacagcctcaagtgcaaaatctttggcacttctctgtctggagctgcttttacatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

529

Amino Acids

56.77

Weight (kDa)

6.78

Isoelectric Point (pI)

42.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 231
AccB7I CCANNNNNTGG 1 cut(s) 995
AccBSI CCGCTC 1 cut(s) 493
AccI GTMKAC 3 cut(s) 66, 565, 935
AccII CGCG 5 cut(s) 26, 428, 713, 743, 1481
AclWI GGATC 2 cut(s) 83, 1037
AcoI YGGCCR 3 cut(s) 753, 1158, 1516
AcsI RAATTY 2 cut(s) 514, 1019
AfaI GTAC 3 cut(s) 12, 867, 1523
AfiI CCNNNNNNNGG 5 cut(s) 556, 995, 1279, 1307, 1375
AgsI TTSAA 6 cut(s) 272, 299, 509, 1018, 1193, 1504
AjiI CACGTC 2 cut(s) 933, 1322
AjnI CCWGG 7 cut(s) 89, 417, 825, 1102, 1177, 1300, 1306
AjuI GAANNNNNNNTTGG 2 cut(s) 788, 820
AluBI AGCT 6 cut(s) 99, 607, 676, 848, 1099, 1577
AluI AGCT 6 cut(s) 99, 607, 676, 848, 1099, 1577
Alw21I GWGCWC 1 cut(s) 1101
Alw26I GTCTC 1 cut(s) 876
AlwI GGATC 2 cut(s) 83, 1037
Ama87I CYCGRG 2 cut(s) 879, 1209
ApaI GGGCCC 1 cut(s) 1366
ApeKI GCWGC 4 cut(s) 521, 760, 1286, 1577
ApoI RAATTY 2 cut(s) 514, 1019
ArsI GACNNNNNNTTYG 2 cut(s) 613, 645
AspA2I CCTAGG 1 cut(s) 1358
AspLEI GCGC 1 cut(s) 434
AspS9I GGNCC 8 cut(s) 21, 559, 732, 1270, 1304, 1362, 1363, 1388
AsuC2I CCSGG 4 cut(s) 73, 105, 1210, 1211
AsuHPI GGTGA 3 cut(s) 406, 973, 980
AvaI CYCGRG 2 cut(s) 879, 1209
AvaII GGWCC 3 cut(s) 21, 559, 732
AvrII CCTAGG 1 cut(s) 1358
BaeGI GKGCMC 4 cut(s) 236, 616, 1136, 1366
BalI TGGCCA 2 cut(s) 755, 1160
BanI GGYRCC 1 cut(s) 231
BanII GRGCYC 2 cut(s) 1101, 1366
Bbv12I GWGCWC 1 cut(s) 1101
BbvI GCAGC 4 cut(s) 508, 772, 1273, 1564
BccI CCATC 7 cut(s) 328, 532, 632, 722, 830, 1067, 1281
BceAI ACGGC 2 cut(s) 584, 1284
BciT130I CCWGG 7 cut(s) 91, 419, 827, 1104, 1179, 1302, 1308
BclI TGATCA 2 cut(s) 141, 1123
BcnI CCSGG 4 cut(s) 73, 105, 1210, 1211
BcoDI GTCTC 1 cut(s) 876
BfaI CTAG 5 cut(s) 96, 408, 608, 1359, 1497
BfmI CTRYAG 1 cut(s) 924
BlnI CCTAGG 1 cut(s) 1358
Bme18I GGWCC 3 cut(s) 21, 559, 732
BmeT110I CYCGRG 2 cut(s) 879, 1209
BmgBI CACGTC 2 cut(s) 933, 1322
BmgT120I GGNCC 8 cut(s) 21, 559, 732, 1270, 1304, 1362, 1363, 1388
BmiI GGNNCC 5 cut(s) 22, 233, 285, 733, 1364
BmrI ACTGGG 2 cut(s) 23, 782
BmsI GCATC 2 cut(s) 420, 1242
BmuI ACTGGG 2 cut(s) 23, 782
BpuEI CTTGAG 2 cut(s) 623, 1526
BpuMI CCSGG 4 cut(s) 73, 105, 1210, 1211
Bsa29I ATCGAT 2 cut(s) 158, 323
BsaWI WCCGGW 1 cut(s) 206
BsaXI ACNNNNNCTCC 4 cut(s) 99, 129, 1120, 1150
Bsc4I CCNNNNNNNGG 5 cut(s) 556, 995, 1279, 1307, 1375
Bse118I RCCGGY 1 cut(s) 991
Bse1I ACTGG 3 cut(s) 18, 777, 1519
Bse3DI GCAATG 2 cut(s) 696, 1517
BseBI CCWGG 7 cut(s) 91, 419, 827, 1104, 1179, 1302, 1308
BseCI ATCGAT 2 cut(s) 158, 323
BseGI GGATG 4 cut(s) 177, 643, 822, 1171
BseLI CCNNNNNNNGG 5 cut(s) 556, 995, 1279, 1307, 1375
BseMI GCAATG 2 cut(s) 696, 1517
BseNI ACTGG 3 cut(s) 18, 777, 1519
BseRI GAGGAG 1 cut(s) 1340
BseSI GKGCMC 4 cut(s) 236, 616, 1136, 1366
BseXI GCAGC 4 cut(s) 508, 772, 1273, 1564
BseYI CCCAGC 1 cut(s) 381
BsgI GTGCAG 1 cut(s) 1272
Bsh1236I CGCG 5 cut(s) 26, 428, 713, 743, 1481
Bsh1285I CGRYCG 1 cut(s) 207
BshNI GGYRCC 1 cut(s) 231
BshVI ATCGAT 2 cut(s) 158, 323
BsiEI CGRYCG 1 cut(s) 207
BsiHKAI GWGCWC 1 cut(s) 1101
BsiHKCI CYCGRG 2 cut(s) 879, 1209
BsiSI CCGG 5 cut(s) 72, 104, 207, 992, 1210
BslFI GGGAC 2 cut(s) 34, 789
BslI CCNNNNNNNGG 5 cut(s) 556, 995, 1279, 1307, 1375
BsmAI GTCTC 1 cut(s) 876
BsmFI GGGAC 2 cut(s) 34, 789
BsmI GAATGC 1 cut(s) 880
BsoBI CYCGRG 2 cut(s) 879, 1209
Bsp120I GGGCCC 1 cut(s) 1362
Bsp1286I GDGCHC 5 cut(s) 236, 616, 1101, 1136, 1366
Bsp143I GATC 7 cut(s) 75, 141, 148, 155, 1042, 1123, 1146
Bsp68I TCGCGA 1 cut(s) 743
BspDI ATCGAT 2 cut(s) 158, 323
BspFNI CGCG 5 cut(s) 26, 428, 713, 743, 1481
BspLI GGNNCC 5 cut(s) 22, 233, 285, 733, 1364
BspPI GGATC 2 cut(s) 83, 1037
BspQI GCTCTTC 2 cut(s) 483, 666
BspT107I GGYRCC 1 cut(s) 231
BsrBI CCGCTC 1 cut(s) 493
BsrDI GCAATG 2 cut(s) 696, 1517
BsrFI RCCGGY 1 cut(s) 991
BsrI ACTGG 3 cut(s) 18, 777, 1519
BssAI RCCGGY 1 cut(s) 991
BssMI GATC 7 cut(s) 75, 141, 148, 155, 1042, 1123, 1146
BssT1I CCWWGG 3 cut(s) 783, 1161, 1358
Bst2UI CCWGG 7 cut(s) 91, 419, 827, 1104, 1179, 1302, 1308
Bst4CI ACNGT 4 cut(s) 38, 563, 1034, 1282
Bst6I CTCTTC 3 cut(s) 483, 666, 1302
BstC8I GCNNGC 6 cut(s) 101, 397, 430, 688, 765, 1413
BstDSI CCRYGG 1 cut(s) 24
BstENI CCTNNNNNAGG 2 cut(s) 554, 1305
BstF5I GGATG 4 cut(s) 177, 643, 822, 1171
BstFNI CGCG 5 cut(s) 26, 428, 713, 743, 1481
BstHHI GCGC 1 cut(s) 434
BstKTI GATC 7 cut(s) 78, 144, 151, 158, 1045, 1126, 1149
BstMAI GTCTC 1 cut(s) 876
BstMBI GATC 7 cut(s) 75, 141, 148, 155, 1042, 1123, 1146
BstMCI CGRYCG 1 cut(s) 207
BstMWI GCNNNNNNNGC 3 cut(s) 431, 1261, 1545
BstNI CCWGG 7 cut(s) 91, 419, 827, 1104, 1179, 1302, 1308
BstSFI CTRYAG 1 cut(s) 924
BstSLI GKGCMC 4 cut(s) 236, 616, 1136, 1366
BstUI CGCG 5 cut(s) 26, 428, 713, 743, 1481
BstV1I GCAGC 4 cut(s) 508, 772, 1273, 1564
BstXI CCANNNNNNTGG 1 cut(s) 1373
Bsu15I ATCGAT 2 cut(s) 158, 323
BsuTUI ATCGAT 2 cut(s) 158, 323
BtgI CCRYGG 1 cut(s) 24
BtgZI GCGATG 2 cut(s) 694, 1265
BtrI CACGTC 2 cut(s) 933, 1322
BtsCI GGATG 4 cut(s) 177, 643, 822, 1171
BtsI GCAGTG 1 cut(s) 1149
BtsIMutI CAGTG 2 cut(s) 151, 1149
BtuMI TCGCGA 1 cut(s) 743
Cac8I GCNNGC 6 cut(s) 101, 397, 430, 688, 765, 1413
CfoI GCGC 1 cut(s) 434
Cfr10I RCCGGY 1 cut(s) 991
Cfr13I GGNCC 8 cut(s) 21, 559, 732, 1270, 1304, 1362, 1363, 1388
Cfr42I CCGCGG 1 cut(s) 27
Cfr9I CCCGGG 1 cut(s) 1209
ClaI ATCGAT 2 cut(s) 158, 323
Csp6I GTAC 3 cut(s) 11, 866, 1522
CspCI CAANNNNNGTGG 2 cut(s) 208, 243
CviAII CATG 6 cut(s) 643, 668, 757, 1222, 1247, 1408
CviQI GTAC 3 cut(s) 11, 866, 1522
DpnI GATC 7 cut(s) 77, 143, 150, 157, 1044, 1125, 1148
DpnII GATC 7 cut(s) 75, 141, 148, 155, 1042, 1123, 1146
EaeI YGGCCR 3 cut(s) 753, 1158, 1516
Eam1104I CTCTTC 3 cut(s) 483, 666, 1302
EarI CTCTTC 3 cut(s) 483, 666, 1302
Ecl136II GAGCTC 1 cut(s) 1099
Eco130I CCWWGG 3 cut(s) 783, 1161, 1358
Eco24I GRGCYC 2 cut(s) 1101, 1366
Eco47I GGWCC 3 cut(s) 21, 559, 732
Eco53kI GAGCTC 1 cut(s) 1099
Eco88I CYCGRG 2 cut(s) 879, 1209
EcoICRI GAGCTC 1 cut(s) 1099
EcoNI CCTNNNNNAGG 2 cut(s) 554, 1305
EcoO109I RGGNCCY 2 cut(s) 1362, 1388
EcoRI GAATTC 1 cut(s) 514
EcoRII CCWGG 7 cut(s) 89, 417, 825, 1102, 1177, 1300, 1306
EcoT14I CCWWGG 3 cut(s) 783, 1161, 1358
EcoT38I GRGCYC 2 cut(s) 1101, 1366
ErhI CCWWGG 3 cut(s) 783, 1161, 1358
FaeI CATG 6 cut(s) 646, 671, 760, 1225, 1250, 1411
FalI AAGNNNNNCTT 4 cut(s) 172, 204, 480, 512
FaqI GGGAC 2 cut(s) 34, 789
FatI CATG 6 cut(s) 642, 667, 756, 1221, 1246, 1407
FauNDI CATATG 1 cut(s) 913
FbaI TGATCA 2 cut(s) 141, 1123
FblI GTMKAC 3 cut(s) 66, 565, 935
FokI GGATG 4 cut(s) 184, 650, 809, 1178
FriOI GRGCYC 2 cut(s) 1101, 1366
FspBI CTAG 5 cut(s) 96, 408, 608, 1359, 1497
GlaI GCGC 1 cut(s) 433
GsaI CCCAGC 1 cut(s) 385
HapII CCGG 5 cut(s) 72, 104, 207, 992, 1210
HhaI GCGC 1 cut(s) 434
Hin1II CATG 6 cut(s) 646, 671, 760, 1225, 1250, 1411
Hin6I GCGC 1 cut(s) 432
HinP1I GCGC 1 cut(s) 432
HincII GTYRAC 3 cut(s) 67, 336, 566
HindII GTYRAC 3 cut(s) 67, 336, 566
HinfI GANTC 4 cut(s) 68, 160, 295, 812
HpaII CCGG 5 cut(s) 72, 104, 207, 992, 1210
HphI GGTGA 3 cut(s) 406, 973, 980
Hpy166II GTNNAC 6 cut(s) 67, 336, 566, 582, 936, 1090
Hpy188I TCNGA 3 cut(s) 795, 1128, 1278
Hpy188III TCNNGA 8 cut(s) 118, 470, 595, 742, 881, 1144, 1461, 1572
Hpy8I GTNNAC 6 cut(s) 67, 336, 566, 582, 936, 1090
Hpy99I CGWCG 3 cut(s) 567, 570, 1323
HpyAV CCTTC 4 cut(s) 266, 515, 1302, 1379
HpyCH4III ACNGT 4 cut(s) 38, 563, 1034, 1282
HpyCH4IV ACGT 3 cut(s) 404, 932, 1321
HpyCH4V TGCA 9 cut(s) 524, 554, 658, 701, 760, 1264, 1289, 1510, 1548
HpyF10VI GCNNNNNNNGC 3 cut(s) 431, 1261, 1545
HpySE526I ACGT 3 cut(s) 404, 932, 1321
Hsp92II CATG 6 cut(s) 646, 671, 760, 1225, 1250, 1411
HspAI GCGC 1 cut(s) 432
Ksp22I TGATCA 2 cut(s) 141, 1123
KspI CCGCGG 1 cut(s) 27
Kzo9I GATC 7 cut(s) 75, 141, 148, 155, 1042, 1123, 1146
LguI GCTCTTC 2 cut(s) 483, 666
LmnI GCTCC 3 cut(s) 283, 1104, 1574
Lsp1109I GCAGC 4 cut(s) 508, 772, 1273, 1564
LweI GCATC 2 cut(s) 420, 1242
MaeI CTAG 5 cut(s) 96, 408, 608, 1359, 1497
MaeII ACGT 3 cut(s) 404, 932, 1321
MaeIII GTNAC 3 cut(s) 199, 436, 968
MalI GATC 7 cut(s) 77, 143, 150, 157, 1044, 1125, 1148
MbiI CCGCTC 1 cut(s) 493
MboI GATC 7 cut(s) 75, 141, 148, 155, 1042, 1123, 1146
MboII GAAGA 8 cut(s) 224, 253, 500, 547, 673, 683, 1289, 1478
MfeI CAATTG 1 cut(s) 632
MhlI GDGCHC 5 cut(s) 236, 616, 1101, 1136, 1366
MlsI TGGCCA 2 cut(s) 755, 1160
MluCI AATT 6 cut(s) 267, 514, 632, 1019, 1108, 1182
MluNI TGGCCA 2 cut(s) 755, 1160
MlyI GAGTC 1 cut(s) 62
MmeI TCCRAC 1 cut(s) 20
Mox20I TGGCCA 2 cut(s) 755, 1160
MscI TGGCCA 2 cut(s) 755, 1160
MseI TTAA 1 cut(s) 498
MslI CAYNNNNRTG 2 cut(s) 1220, 1371
Msp20I TGGCCA 2 cut(s) 755, 1160
MspA1I CMGCKG 3 cut(s) 26, 848, 871
MspI CCGG 5 cut(s) 72, 104, 207, 992, 1210
MunI CAATTG 1 cut(s) 632
Mva1269I GAATGC 1 cut(s) 880
MvaI CCWGG 7 cut(s) 91, 419, 827, 1104, 1179, 1302, 1308
MvnI CGCG 5 cut(s) 26, 428, 713, 743, 1481
MwoI GCNNNNNNNGC 3 cut(s) 431, 1261, 1545
NciI CCSGG 4 cut(s) 73, 105, 1210, 1211
NdeI CATATG 1 cut(s) 913
NdeII GATC 7 cut(s) 75, 141, 148, 155, 1042, 1123, 1146
NlaIII CATG 6 cut(s) 646, 671, 760, 1225, 1250, 1411
NlaIV GGNNCC 5 cut(s) 22, 233, 285, 733, 1364
NmuCI GTSAC 2 cut(s) 199, 968
NruI TCGCGA 1 cut(s) 743
PaeR7I CTCGAG 1 cut(s) 879
PasI CCCWGGG 1 cut(s) 1103
PciSI GCTCTTC 2 cut(s) 483, 666
PctI GAATGC 1 cut(s) 880
PfeI GAWTC 3 cut(s) 160, 295, 812
PflFI GACNNNGTC 1 cut(s) 887
PflMI CCANNNNNTGG 1 cut(s) 995
PfoI TCCNGGA 2 cut(s) 71, 89
PleI GAGTC 1 cut(s) 62
PpsI GAGTC 1 cut(s) 62
Psp124BI GAGCTC 1 cut(s) 1101
Psp6I CCWGG 7 cut(s) 89, 417, 825, 1102, 1177, 1300, 1306
PspFI CCCAGC 1 cut(s) 381
PspGI CCWGG 7 cut(s) 89, 417, 825, 1102, 1177, 1300, 1306
PspN4I GGNNCC 5 cut(s) 22, 233, 285, 733, 1364
PspOMI GGGCCC 1 cut(s) 1362
PspPI GGNCC 8 cut(s) 21, 559, 732, 1270, 1304, 1362, 1363, 1388
PsyI GACNNNGTC 1 cut(s) 887
PvuII CAGCTG 1 cut(s) 848
RruI TCGCGA 1 cut(s) 743
RsaI GTAC 3 cut(s) 12, 867, 1523
RsaNI GTAC 3 cut(s) 11, 866, 1522
RseI CAYNNNNRTG 2 cut(s) 1220, 1371
SacI GAGCTC 1 cut(s) 1101
SacII CCGCGG 1 cut(s) 27
SalI GTCGAC 2 cut(s) 65, 564
SapI GCTCTTC 2 cut(s) 483, 666
SaqAI TTAA 1 cut(s) 498
Sau3AI GATC 7 cut(s) 75, 141, 148, 155, 1042, 1123, 1146
Sau96I GGNCC 8 cut(s) 21, 559, 732, 1270, 1304, 1362, 1363, 1388
SchI GAGTC 1 cut(s) 62
SduI GDGCHC 5 cut(s) 236, 616, 1101, 1136, 1366
SfaNI GCATC 2 cut(s) 420, 1242
SfcI CTRYAG 1 cut(s) 924
Sfr274I CTCGAG 1 cut(s) 879
Sfr303I CCGCGG 1 cut(s) 27
SgrBI CCGCGG 1 cut(s) 27
SgrDI CGTCGACG 1 cut(s) 564
SinI GGWCC 3 cut(s) 21, 559, 732
SlaI CTCGAG 1 cut(s) 879
SmaI CCCGGG 1 cut(s) 1211
SmiMI CAYNNNNRTG 2 cut(s) 1220, 1371
SmlI CTYRAG 3 cut(s) 602, 879, 1541
SmoI CTYRAG 3 cut(s) 602, 879, 1541
Sse9I AATT 6 cut(s) 267, 514, 632, 1019, 1108, 1182
SspI AATATT 1 cut(s) 1204
SspMI CTAG 5 cut(s) 96, 408, 608, 1359, 1497
SstI GAGCTC 1 cut(s) 1101
StyI CCWWGG 3 cut(s) 783, 1161, 1358
TaaI ACNGT 4 cut(s) 38, 563, 1034, 1282
TaiI ACGT 3 cut(s) 407, 935, 1324
TaqI TCGA 5 cut(s) 66, 158, 323, 565, 880
TaqII GACCGA 1 cut(s) 580
TasI AATT 6 cut(s) 267, 514, 632, 1019, 1108, 1182
TatI WGTACW 1 cut(s) 10
TauI GCSGC 6 cut(s) 380, 428, 496, 716, 1484, 1518
TfiI GAWTC 3 cut(s) 160, 295, 812
Tru1I TTAA 1 cut(s) 498
Tru9I TTAA 1 cut(s) 498
TscAI CASTG 2 cut(s) 151, 1156
TseFI GTSAC 2 cut(s) 199, 968
TseI GCWGC 4 cut(s) 521, 760, 1286, 1577
Tsp45I GTSAC 2 cut(s) 199, 968
TspDTI ATGAA 4 cut(s) 47, 659, 684, 1398
TspMI CCCGGG 1 cut(s) 1209
TspRI CASTG 2 cut(s) 151, 1156
Tth111I GACNNNGTC 1 cut(s) 887
Van91I CCANNNNNTGG 1 cut(s) 995
VpaK11BI GGWCC 3 cut(s) 21, 559, 732
XagI CCTNNNNNAGG 2 cut(s) 554, 1305
XapI RAATTY 2 cut(s) 514, 1019
XcmI CCANNNNNNNNNTGG 1 cut(s) 823
XhoI CTCGAG 1 cut(s) 879
XmaI CCCGGG 1 cut(s) 1209
XmaJI CCTAGG 1 cut(s) 1358
XmiI GTMKAC 3 cut(s) 66, 565, 935
XspI CTAG 5 cut(s) 96, 408, 608, 1359, 1497
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.