Rmu_sc0011809.1_g000007

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011809.1
OG0000057
Physical Location & Seq
Forward (+)
26489 .. 27947
1459 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011809.1_g000007.1.cds

Sequence Viewer

Length: 1362 bp
atgtcaactgcacaagaggagaatcgctcgaccgcgactgaaggtcagagcgtcaatgttaatcaggccagcgagcctgttattcccgccactgtcaacactgcagtggaaggtgatgaagaagaggcttttgtttcgaagcctatcccggaaggagcaaccattgaggaaacactcgcgatcctcatggagaatgtcgacaatcatcgcaagaagatggacgctgattttgccagagaaacagcaaaatcagaaaagctcctccgcgaaattgagcagcgtatgactctacacacggagaatacccgccagcaaattacgcaaacagagagtgccttgaaggcgcaagctgtaaccatcgctgccgaacaggatcagcgtcatagaacaattttgaacactatagcggagcataccaagcagactgcgtcgaatatggcagatcttcgcaaggatggggccaacttggcaaccgaggtggctatgcagagagccgaattgaaccaggcgagagatgtaatgaacaaggccttagaggatcctaatgctatccttggctctcttggccaaccatccggttcaggcaagtacgtgccaccaaatcagggcgagaaggccaaccaaaatgctggttcttcctcagctactgttgctactgctccatcaaggaacaaagaacaagccttggttattaatggcggcaaggaaaaaactgcttcatcaagcggacaagctaccaagaaacaccaagtctcgaagggtgcaggaactgcgtcagaacctgtgacgttcgtccagtacgacagtgacggagtagaaatggtatatcaagaattgccgggaagttattatgcgctcgaccagactggcgccccggtcaaaataaccgctctgtcgaaggaagaggttacccctgcagtaactcttcagcaacaagctactacccgcattttgcatgtcggggaaggatcaacaatggtaaaccaggcaacccctgggcaaactgccagaaatgtaacttttcagcaacaagctactacccgcattttgcatgtcggggaaggatcaacaatggtaaaccaggcaacccctgggcaaactgcccaccgagctgcggtgatccctcctccgcctccaggcccagagtatgtgagatgcgatgaggtagaggagatgatcagattagcaaaccctagagcccagccggatggggtatatgagggacctttcccgccacacatcatgctcgcacctttcccccgaggctataagaacattattttctctactttttcaggggaggacacagaagacgcggcaacacacctggccagattaagagtgcaatgcggccaatattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

453

Amino Acids

48.84

Weight (kDa)

5.3

Isoelectric Point (pI)

45.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 869
AccBSI CCGCTC 1 cut(s) 890
AccI GTMKAC 1 cut(s) 198
AccII CGCG 4 cut(s) 35, 179, 267, 1316
AclWI GGATC 7 cut(s) 175, 381, 533, 546, 976, 1072, 1114
AcoI YGGCCR 3 cut(s) 565, 1329, 1351
AcuI CTGAAG 2 cut(s) 60, 911
AcyI GRCGYC 1 cut(s) 870
AfaI GTAC 2 cut(s) 590, 800
AfiI CCNNNNNNNGG 3 cut(s) 605, 1114, 1136
AgsI TTSAA 3 cut(s) 340, 397, 502
AhdI GACNNNNNGTC 1 cut(s) 42
AjnI CCWGG 7 cut(s) 504, 984, 994, 1080, 1090, 1135, 1326
AleI CACNNNNGTG 1 cut(s) 104
AluBI AGCT 7 cut(s) 259, 350, 644, 734, 938, 1034, 1112
AluI AGCT 7 cut(s) 259, 350, 644, 734, 938, 1034, 1112
Alw26I GTCTC 1 cut(s) 757
AlwI GGATC 7 cut(s) 175, 381, 533, 546, 976, 1072, 1114
AlwNI CAGNNNCTG 3 cut(s) 647, 770, 782
Ama87I CYCGRG 1 cut(s) 1260
AoxI GGCC 8 cut(s) 66, 459, 528, 565, 615, 1138, 1329, 1351
ApeKI GCWGC 3 cut(s) 277, 362, 1112
ArsI GACNNNNNNTTYG 2 cut(s) 212, 244
AseI ATTAAT 1 cut(s) 693
AspLEI GCGC 3 cut(s) 346, 856, 872
AspS9I GGNCC 3 cut(s) 459, 1139, 1223
AsuC2I CCSGG 3 cut(s) 149, 840, 875
AsuHPI GGTGA 2 cut(s) 125, 1129
AsuII TTCGAA 1 cut(s) 137
AvaI CYCGRG 1 cut(s) 1260
AvaII GGWCC 1 cut(s) 1223
BalI TGGCCA 2 cut(s) 567, 1331
BamHI GGATCC 1 cut(s) 538
BanI GGYRCC 1 cut(s) 869
BanII GRGCYC 1 cut(s) 1201
BbsI GAAGAC 1 cut(s) 1317
BbvCI CCTCAGC 1 cut(s) 640
BbvI GCAGC 3 cut(s) 289, 349, 1099
BccI CCATC 6 cut(s) 211, 365, 449, 580, 670, 1202
BciT130I CCWGG 7 cut(s) 506, 986, 996, 1082, 1092, 1137, 1328
BclI TGATCA 1 cut(s) 1176
BcnI CCSGG 3 cut(s) 149, 840, 875
BcoDI GTCTC 1 cut(s) 757
BfaI CTAG 1 cut(s) 1194
BfmI CTRYAG 3 cut(s) 102, 402, 915
BfoI RGCGCY 1 cut(s) 873
BglI GCCNNNNNGGC 2 cut(s) 341, 467
BglII AGATCT 1 cut(s) 442
BisI GCNGC 6 cut(s) 278, 363, 700, 1113, 1317, 1351
BlsI GCNGC 6 cut(s) 279, 364, 701, 1114, 1318, 1352
Bme18I GGWCC 1 cut(s) 1223
BmeRI GACNNNNNGTC 1 cut(s) 42
BmeT110I CYCGRG 1 cut(s) 1260
BmgT120I GGNCC 3 cut(s) 459, 1139, 1223
BmiI GGNNCC 4 cut(s) 460, 540, 871, 1224
BmsI GCATC 1 cut(s) 1145
BoxI GACNNNNGTC 1 cut(s) 791
BpiI GAAGAC 1 cut(s) 1317
BplI GAGNNNNNCTC 2 cut(s) 11, 43
BpmI CTGGAG 1 cut(s) 1119
Bpu10I CCTNAGC 1 cut(s) 640
Bpu14I TTCGAA 1 cut(s) 137
BpuMI CCSGG 3 cut(s) 149, 840, 875
BsaAI YACGTR 1 cut(s) 592
BsaHI GRCGYC 1 cut(s) 870
BsaJI CCNNGG 9 cut(s) 474, 553, 684, 873, 994, 995, 1090, 1091, 1261
BsaWI WCCGGW 1 cut(s) 575
Bsc4I CCNNNNNNNGG 3 cut(s) 605, 1114, 1136
Bse1I ACTGG 2 cut(s) 796, 871
Bse3DI GCAATG 1 cut(s) 1352
BseBI CCWGG 7 cut(s) 506, 986, 996, 1082, 1092, 1137, 1328
BseDI CCNNGG 9 cut(s) 474, 553, 684, 873, 994, 995, 1090, 1091, 1261
BseGI GGATG 3 cut(s) 460, 572, 1213
BseLI CCNNNNNNNGG 3 cut(s) 605, 1114, 1136
BseMI GCAATG 1 cut(s) 1352
BseMII CTCAG 1 cut(s) 654
BseNI ACTGG 2 cut(s) 796, 871
BseRI GAGGAG 4 cut(s) 32, 251, 1116, 1184
BseXI GCAGC 3 cut(s) 289, 349, 1099
BseYI CCCAGC 1 cut(s) 1200
BsgI GTGCAG 1 cut(s) 783
Bsh1236I CGCG 4 cut(s) 35, 179, 267, 1316
Bsh1285I CGRYCG 1 cut(s) 33
BshFI GGCC 8 cut(s) 68, 461, 530, 567, 617, 1140, 1331, 1353
BshNI GGYRCC 1 cut(s) 869
BsiEI CGRYCG 1 cut(s) 33
BsiHKCI CYCGRG 1 cut(s) 1260
BsiSI CCGG 5 cut(s) 149, 576, 839, 875, 1205
BslFI GGGAC 1 cut(s) 1236
BslI CCNNNNNNNGG 3 cut(s) 605, 1114, 1136
BsmAI GTCTC 1 cut(s) 757
BsmFI GGGAC 1 cut(s) 1236
BsnI GGCC 8 cut(s) 68, 461, 530, 567, 617, 1140, 1331, 1353
BsoBI CYCGRG 1 cut(s) 1260
Bsp119I TTCGAA 1 cut(s) 137
Bsp1286I GDGCHC 1 cut(s) 1201
Bsp143I GATC 8 cut(s) 180, 373, 442, 538, 968, 1064, 1119, 1176
Bsp68I TCGCGA 1 cut(s) 179
BspANI GGCC 8 cut(s) 68, 461, 530, 567, 617, 1140, 1331, 1353
BspCNI CTCAG 1 cut(s) 653
BspFNI CGCG 4 cut(s) 35, 179, 267, 1316
BspLI GGNNCC 4 cut(s) 460, 540, 871, 1224
BspMAI CTGCAG 2 cut(s) 106, 919
BspPI GGATC 7 cut(s) 175, 381, 533, 546, 976, 1072, 1114
BspT104I TTCGAA 1 cut(s) 137
BspT107I GGYRCC 1 cut(s) 869
BsrBI CCGCTC 1 cut(s) 890
BsrDI GCAATG 1 cut(s) 1352
BsrI ACTGG 2 cut(s) 796, 871
BssECI CCNNGG 9 cut(s) 474, 553, 684, 873, 994, 995, 1090, 1091, 1261
BssMI GATC 8 cut(s) 180, 373, 442, 538, 968, 1064, 1119, 1176
BssNI GRCGYC 1 cut(s) 870
BssT1I CCWWGG 2 cut(s) 553, 684
Bst2UI CCWGG 7 cut(s) 506, 986, 996, 1082, 1092, 1137, 1328
Bst4CI ACNGT 3 cut(s) 94, 649, 806
Bst6I CTCTTC 3 cut(s) 117, 897, 930
BstACI GRCGYC 1 cut(s) 870
BstAPI GCANNNNNTGC 1 cut(s) 770
BstBAI YACGTR 1 cut(s) 592
BstBI TTCGAA 1 cut(s) 137
BstC8I GCNNGC 5 cut(s) 70, 74, 311, 348, 1248
BstDEI CTNAG 2 cut(s) 532, 640
BstEII GGTNACC 1 cut(s) 907
BstF5I GGATG 3 cut(s) 460, 572, 1213
BstFNI CGCG 4 cut(s) 35, 179, 267, 1316
BstH2I RGCGCY 1 cut(s) 873
BstHHI GCGC 3 cut(s) 346, 856, 872
BstKTI GATC 8 cut(s) 183, 376, 445, 541, 971, 1067, 1122, 1179
BstMAI GTCTC 1 cut(s) 757
BstMBI GATC 8 cut(s) 180, 373, 442, 538, 968, 1064, 1119, 1176
BstMCI CGRYCG 1 cut(s) 33
BstMWI GCNNNNNNNGC 9 cut(s) 230, 319, 341, 418, 467, 564, 650, 770, 1109
BstNI CCWGG 7 cut(s) 506, 986, 996, 1082, 1092, 1137, 1328
BstNSI RCATGY 2 cut(s) 959, 1055
BstPAI GACNNNNGTC 1 cut(s) 791
BstPI GGTNACC 1 cut(s) 907
BstSFI CTRYAG 3 cut(s) 102, 402, 915
BstUI CGCG 4 cut(s) 35, 179, 267, 1316
BstV1I GCAGC 3 cut(s) 289, 349, 1099
BstV2I GAAGAC 1 cut(s) 1317
BstX2I RGATCY 2 cut(s) 442, 538
BstXI CCANNNNNNTGG 2 cut(s) 629, 1208
BstYI RGATCY 2 cut(s) 442, 538
BsuRI GGCC 8 cut(s) 68, 461, 530, 567, 617, 1140, 1331, 1353
BtgZI GCGATG 3 cut(s) 191, 343, 1173
BtsCI GGATG 3 cut(s) 460, 572, 1213
BtsI GCAGTG 2 cut(s) 99, 111
BtsIMutI CAGTG 4 cut(s) 90, 99, 111, 811
BtuMI TCGCGA 1 cut(s) 179
Cac8I GCNNGC 5 cut(s) 70, 74, 311, 348, 1248
CaiI CAGNNNCTG 3 cut(s) 647, 770, 782
CfoI GCGC 3 cut(s) 346, 856, 872
Cfr13I GGNCC 3 cut(s) 459, 1139, 1223
CseI GACGC 6 cut(s) 40, 230, 368, 417, 762, 1322
Csp6I GTAC 2 cut(s) 589, 799
CspCI CAANNNNNGTGG 2 cut(s) 459, 494
CviAII CATG 4 cut(s) 187, 956, 1052, 1243
CviQI GTAC 2 cut(s) 589, 799
DdeI CTNAG 2 cut(s) 532, 640
DinI GGCGCC 1 cut(s) 871
DpnI GATC 8 cut(s) 182, 375, 444, 540, 970, 1066, 1121, 1178
DpnII GATC 8 cut(s) 180, 373, 442, 538, 968, 1064, 1119, 1176
DriI GACNNNNNGTC 1 cut(s) 42
EaeI YGGCCR 3 cut(s) 565, 1329, 1351
Eam1104I CTCTTC 3 cut(s) 117, 897, 930
Eam1105I GACNNNNNGTC 1 cut(s) 42
EarI CTCTTC 3 cut(s) 117, 897, 930
EciI GGCGGA 1 cut(s) 1119
Eco130I CCWWGG 2 cut(s) 553, 684
Eco147I AGGCCT 1 cut(s) 530
Eco24I GRGCYC 1 cut(s) 1201
Eco47I GGWCC 1 cut(s) 1223
Eco57I CTGAAG 2 cut(s) 60, 911
Eco88I CYCGRG 1 cut(s) 1260
Eco91I GGTNACC 1 cut(s) 907
EcoO109I RGGNCCY 1 cut(s) 1223
EcoO65I GGTNACC 1 cut(s) 907
EcoRII CCWGG 7 cut(s) 504, 984, 994, 1080, 1090, 1135, 1326
EcoT14I CCWWGG 2 cut(s) 553, 684
EcoT38I GRGCYC 1 cut(s) 1201
EgeI GGCGCC 1 cut(s) 871
EheI GGCGCC 1 cut(s) 871
ErhI CCWWGG 2 cut(s) 553, 684
FaeI CATG 4 cut(s) 190, 959, 1055, 1246
FaqI GGGAC 1 cut(s) 1236
FatI CATG 4 cut(s) 186, 955, 1051, 1242
FauI CCCGC 5 cut(s) 94, 314, 953, 1049, 1239
FbaI TGATCA 1 cut(s) 1176
FblI GTMKAC 1 cut(s) 198
Fnu4HI GCNGC 6 cut(s) 278, 363, 700, 1113, 1317, 1351
FokI GGATG 3 cut(s) 467, 559, 1220
FriOI GRGCYC 1 cut(s) 1201
Fsp4HI GCNGC 6 cut(s) 278, 363, 700, 1113, 1317, 1351
FspBI CTAG 1 cut(s) 1194
GlaI GCGC 3 cut(s) 345, 855, 871
GluI GCNGC 6 cut(s) 278, 363, 700, 1113, 1317, 1351
GsaI CCCAGC 1 cut(s) 1204
GsuI CTGGAG 1 cut(s) 1119
HaeII RGCGCY 1 cut(s) 873
HaeIII GGCC 8 cut(s) 68, 461, 530, 567, 617, 1140, 1331, 1353
HapII CCGG 5 cut(s) 149, 576, 839, 875, 1205
HgaI GACGC 6 cut(s) 40, 230, 368, 417, 762, 1322
HhaI GCGC 3 cut(s) 346, 856, 872
Hin1I GRCGYC 1 cut(s) 870
Hin1II CATG 4 cut(s) 190, 959, 1055, 1246
Hin6I GCGC 3 cut(s) 344, 854, 870
HinP1I GCGC 3 cut(s) 344, 854, 870
HincII GTYRAC 3 cut(s) 6, 97, 199
HindII GTYRAC 3 cut(s) 6, 97, 199
HinfI GANTC 2 cut(s) 22, 286
HpaII CCGG 5 cut(s) 149, 576, 839, 875, 1205
HphI GGTGA 2 cut(s) 125, 1129
Hpy166II GTNNAC 5 cut(s) 6, 97, 199, 982, 1078
Hpy188I TCNGA 4 cut(s) 48, 253, 778, 1181
Hpy188III TCNNGA 3 cut(s) 178, 754, 830
Hpy8I GTNNAC 5 cut(s) 6, 97, 199, 982, 1078
Hpy99I CGWCG 1 cut(s) 433
HpyAV CCTTC 9 cut(s) 35, 104, 146, 334, 607, 751, 892, 959, 1055
HpyCH4III ACNGT 3 cut(s) 94, 649, 806
HpyCH4IV ACGT 2 cut(s) 591, 788
HpyCH4V TGCA 8 cut(s) 11, 104, 487, 764, 917, 955, 1051, 1345
HpyF10VI GCNNNNNNNGC 9 cut(s) 230, 319, 341, 418, 467, 564, 650, 770, 1109
HpyF3I CTNAG 2 cut(s) 532, 640
HpySE526I ACGT 2 cut(s) 591, 788
Hsp92I GRCGYC 1 cut(s) 870
Hsp92II CATG 4 cut(s) 190, 959, 1055, 1246
HspAI GCGC 3 cut(s) 344, 854, 870
KasI GGCGCC 1 cut(s) 869
Ksp22I TGATCA 1 cut(s) 1176
Kzo9I GATC 8 cut(s) 180, 373, 442, 538, 968, 1064, 1119, 1176
LmnI GCTCC 4 cut(s) 155, 264, 409, 664
Lsp1109I GCAGC 3 cut(s) 289, 349, 1099
LweI GCATC 1 cut(s) 1145
MaeI CTAG 1 cut(s) 1194
MaeII ACGT 2 cut(s) 591, 788
MaeIII GTNAC 6 cut(s) 352, 784, 806, 907, 919, 1015
MalI GATC 8 cut(s) 182, 375, 444, 540, 970, 1066, 1121, 1178
MbiI CCGCTC 1 cut(s) 890
MboI GATC 8 cut(s) 180, 373, 442, 538, 968, 1064, 1119, 1176
MboII GAAGA 8 cut(s) 131, 134, 226, 437, 627, 914, 917, 1322
MflI RGATCY 2 cut(s) 442, 538
MhlI GDGCHC 1 cut(s) 1201
MlsI TGGCCA 2 cut(s) 567, 1331
MluCI AATT 5 cut(s) 270, 315, 390, 497, 833
MluNI TGGCCA 2 cut(s) 567, 1331
Mly113I GGCGCC 1 cut(s) 870
MlyI GAGTC 1 cut(s) 280
Mox20I TGGCCA 2 cut(s) 567, 1331
MscI TGGCCA 2 cut(s) 567, 1331
MseI TTAA 3 cut(s) 60, 693, 1337
MslI CAYNNNNRTG 1 cut(s) 104
Msp20I TGGCCA 2 cut(s) 567, 1331
MspI CCGG 5 cut(s) 149, 576, 839, 875, 1205
MvaI CCWGG 7 cut(s) 506, 986, 996, 1082, 1092, 1137, 1328
MvnI CGCG 4 cut(s) 35, 179, 267, 1316
MwoI GCNNNNNNNGC 9 cut(s) 230, 319, 341, 418, 467, 564, 650, 770, 1109
NarI GGCGCC 1 cut(s) 870
NciI CCSGG 3 cut(s) 149, 840, 875
NdeII GATC 8 cut(s) 180, 373, 442, 538, 968, 1064, 1119, 1176
NlaIII CATG 4 cut(s) 190, 959, 1055, 1246
NlaIV GGNNCC 4 cut(s) 460, 540, 871, 1224
NmuCI GTSAC 2 cut(s) 784, 806
NruI TCGCGA 1 cut(s) 179
NspI RCATGY 2 cut(s) 959, 1055
NspV TTCGAA 1 cut(s) 137
OliI CACNNNNGTG 1 cut(s) 104
PasI CCCWGGG 2 cut(s) 995, 1091
PceI AGGCCT 1 cut(s) 530
PcsI WCGNNNNNNNCGW 1 cut(s) 798
PfeI GAWTC 1 cut(s) 22
PflFI GACNNNGTC 1 cut(s) 427
PfoI TCCNGGA 1 cut(s) 147
PkrI GCNGC 6 cut(s) 279, 364, 701, 1114, 1318, 1352
PleI GAGTC 1 cut(s) 280
PluTI GGCGCC 1 cut(s) 873
PpsI GAGTC 1 cut(s) 280
Ppu21I YACGTR 1 cut(s) 592
PpuMI RGGWCCY 1 cut(s) 1223
PshAI GACNNNNGTC 1 cut(s) 791
PshBI ATTAAT 1 cut(s) 693
Psp5II RGGWCCY 1 cut(s) 1223
Psp6I CCWGG 7 cut(s) 504, 984, 994, 1080, 1090, 1135, 1326
PspEI GGTNACC 1 cut(s) 907
PspFI CCCAGC 1 cut(s) 1200
PspGI CCWGG 7 cut(s) 504, 984, 994, 1080, 1090, 1135, 1326
PspN4I GGNNCC 4 cut(s) 460, 540, 871, 1224
PspPI GGNCC 3 cut(s) 459, 1139, 1223
PspPPI RGGWCCY 1 cut(s) 1223
PstI CTGCAG 2 cut(s) 106, 919
PstNI CAGNNNCTG 3 cut(s) 647, 770, 782
PsuI RGATCY 2 cut(s) 442, 538
PsyI GACNNNGTC 1 cut(s) 427
RruI TCGCGA 1 cut(s) 179
RsaI GTAC 2 cut(s) 590, 800
RsaNI GTAC 2 cut(s) 589, 799
RseI CAYNNNNRTG 1 cut(s) 104
SalI GTCGAC 1 cut(s) 197
SaqAI TTAA 3 cut(s) 60, 693, 1337
SatI GCNGC 6 cut(s) 278, 363, 700, 1113, 1317, 1351
Sau3AI GATC 8 cut(s) 180, 373, 442, 538, 968, 1064, 1119, 1176
Sau96I GGNCC 3 cut(s) 459, 1139, 1223
SchI GAGTC 1 cut(s) 280
SduI GDGCHC 1 cut(s) 1201
SfaNI GCATC 1 cut(s) 1145
SfcI CTRYAG 3 cut(s) 102, 402, 915
SfoI GGCGCC 1 cut(s) 871
SfuI TTCGAA 1 cut(s) 137
SinI GGWCC 1 cut(s) 1223
SmiMI CAYNNNNRTG 1 cut(s) 104
Sse9I AATT 5 cut(s) 270, 315, 390, 497, 833
SseBI AGGCCT 1 cut(s) 530
SspDI GGCGCC 1 cut(s) 869
SspI AATATT 1 cut(s) 1358
SspMI CTAG 1 cut(s) 1194
StuI AGGCCT 1 cut(s) 530
StyI CCWWGG 2 cut(s) 553, 684
TaaI ACNGT 3 cut(s) 94, 649, 806
TaiI ACGT 2 cut(s) 594, 791
TaqI TCGA 7 cut(s) 29, 137, 198, 431, 755, 858, 896
TasI AATT 5 cut(s) 270, 315, 390, 497, 833
TauI GCSGC 3 cut(s) 702, 1319, 1353
TfiI GAWTC 1 cut(s) 22
Tru1I TTAA 3 cut(s) 60, 693, 1337
Tru9I TTAA 3 cut(s) 60, 693, 1337
TscAI CASTG 4 cut(s) 97, 106, 111, 811
TseFI GTSAC 2 cut(s) 784, 806
TseI GCWGC 3 cut(s) 277, 362, 1112
Tsp45I GTSAC 2 cut(s) 784, 806
TspDTI ATGAA 3 cut(s) 132, 536, 708
TspGWI ACGGA 2 cut(s) 311, 825
TspRI CASTG 4 cut(s) 97, 106, 111, 811
Tth111I GACNNNGTC 1 cut(s) 427
VpaK11BI GGWCC 1 cut(s) 1223
VspI ATTAAT 1 cut(s) 693
XceI RCATGY 2 cut(s) 959, 1055
XcmI CCANNNNNNNNNTGG 2 cut(s) 992, 1088
XmiI GTMKAC 1 cut(s) 198
XspI CTAG 1 cut(s) 1194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.