Rmu_sc0008502.1_g000006

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008502.1
OG0000057
Physical Location & Seq
Reverse (-)
13714 .. 18843
5130 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008502.1_g000006.1.cds

Sequence Viewer

Length: 1986 bp
atgtttgacaacatcagtgctaatttggtggcggatgcacagttaaccttagattgtgggacattgcagagtgtagttggaagtgtcattacagccacagatcgctggccaaaacccagaggtcttgtacttccttcaaatgcaatggctgcaggcatgctgccaagcccttcacacgacggttccctacaatcgatcttcatcagacgaggcctcgatagagtacgctttgcctccgtatcagacgacgtcgaaaccctaggatataagtacagggttaagcggcgaaataaaggacctctctcaactcaactaattccagcgattacaaagcctccccggagcaaaccttcaacctcgttgaaacccggtgaccgcccgccagtcctagtctcctcgcgagccgactatcagcatcaccagatcaaccaggcgaccgtgcttccagtcctagtctcctcgcgagcctactgccagcataagccctttcccaaaaggcaagggaagaacactgtgaccaggttggtgctctccttgtccacagcgcttgaagaagaagtcaggtcaagggactaccccaacgactgcaccccacgcgataacccttatcaaaaaggctacgccaactgctcaaaacataagacctccagttacagaccgaatcctcgcgcggactgtcgtggtctttctgaagaacaagtgacgcaacgattctctcatcagccccaatcactcggtatgtcaactggacaagatgagaatcgctcgactgctactgagggtcagagcgtcaatgttaatcaggccagcgagcctgttatccccaccactgtcaacactgcagctggaggtggagaaggagaggctttcattgcgaagcctattccagaagaagcgaccttcgaggaaaggtgcgcgattatcatagaaaatatcgagaaccatctcaagaagatggacgctgattttgctagggaaaccgcaaaggcagataggctcttacgcgaactggatcagcgtatgactctacatacagaggataccagacagcagatcgcacaatcagaaagtgctgtgaaggcacatgccgcaggtatcgctagcgagcaggatcagcgtcaaaaggcaattttggaggctatagcgggtcacaccaagcagaccgcgtcggatatggcaggtcttcgcaaggatggggccaacctagcaaccgaggtggctatgcagagagcagaattgaatcaagcaagagaagtattgaacaaagctttaggggatcctaatgctatccttggctctctcaaccaaccatccggttcaggcaagtacgtgccgccaaatcagcgcgagaagactaacaaccatgttgtttcttcctcagctactgttgctgctacaccgtcgaagaataaagaacaagcactggttatcagtggcaacaaggaaaagactgcttcgtcaagcagacacaccaccagacagaggcaccaagcctcaaagggcgcaggaacttcgtccgaacccgttacgttcgttcagtacgacagcgacggggcagagatggtgtatcaagaactgccaggaagttattatgggctcgaccagaccggcacctcgatcaagataacagctctgtcaaaggaagagattacgccagcggtaactctccaacaacaggctactacccgcgttgtgcatgtcggggaagggtcggcaatggtaaaccaggcagtacctgtgcaagcaacccaccggactgcggcgacacctcctgcgggcccagattatgtcagacgtgatgaagtagaggagatgatcagattggccaaccctagggcccagccagatggggtctatgaaggacctttcccgccacacatcatgctcgcacctttcccccggggttataagaatatcattttttctactttttcaggggaggacactgaagatgcggcaacacatctggccaggtttagggtatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

661

Amino Acids

71.98

Weight (kDa)

8.67

Isoelectric Point (pI)

50.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1908
AasI GACNNNNNNGTC 1 cut(s) 1456
AatII GACGTC 1 cut(s) 252
Acc36I ACCTGC 2 cut(s) 1082, 1169
AccB1I GGYRCC 2 cut(s) 1485, 1610
AclWI GGATC 4 cut(s) 1020, 1119, 1271, 1284
AcoI YGGCCR 3 cut(s) 107, 1824, 1968
AcuI CTGAAG 2 cut(s) 711, 1968
AcyI GRCGYC 1 cut(s) 249
AfaI GTAC 6 cut(s) 129, 225, 272, 1328, 1541, 1734
AfeI AGCGCT 1 cut(s) 546
AfiI CCNNNNNNNGG 6 cut(s) 1482, 1675, 1759, 1775, 1833, 1977
AgsI TTSAA 6 cut(s) 138, 354, 364, 551, 1240, 1261
AjiI CACGTC 1 cut(s) 1796
AjnI CCWGG 5 cut(s) 429, 518, 1579, 1725, 1970
AluBI AGCT 4 cut(s) 845, 1268, 1382, 1631
AluI AGCT 4 cut(s) 845, 1268, 1382, 1631
Alw21I GWGCWC 1 cut(s) 531
Alw26I GTCTC 2 cut(s) 397, 460
AlwI GGATC 4 cut(s) 1020, 1119, 1271, 1284
AlwNI CAGNNNCTG 2 cut(s) 1385, 1736
Ama87I CYCGRG 1 cut(s) 1899
Aor51HI AGCGCT 1 cut(s) 546
AoxI GGCC 8 cut(s) 107, 211, 804, 1197, 1777, 1824, 1836, 1968
ApaI GGGCCC 2 cut(s) 1781, 1840
ApeKI GCWGC 4 cut(s) 149, 160, 842, 1391
ArsI GACNNNNNNTTYG 2 cut(s) 950, 982
AspA2I CCTAGG 2 cut(s) 259, 1832
AspLEI GCGC 5 cut(s) 547, 671, 917, 1347, 1505
AspS9I GGNCC 7 cut(s) 296, 1197, 1777, 1778, 1836, 1837, 1862
AsuC2I CCSGG 4 cut(s) 340, 369, 1900, 1901
AsuHPI GGTGA 2 cut(s) 383, 410
AsuNHI GCTAGC 1 cut(s) 1100
AvaI CYCGRG 1 cut(s) 1899
AvaII GGWCC 2 cut(s) 296, 1862
AvrII CCTAGG 2 cut(s) 259, 1832
BaeGI GKGCMC 2 cut(s) 1781, 1840
BalI TGGCCA 3 cut(s) 109, 1826, 1970
BamHI GGATCC 1 cut(s) 1276
BanI GGYRCC 2 cut(s) 1485, 1610
BanII GRGCYC 3 cut(s) 1599, 1781, 1840
BarI GAAGNNNNNNTAC 2 cut(s) 73, 105
BbsI GAAGAC 2 cut(s) 1175, 1358
Bbv12I GWGCWC 1 cut(s) 531
BbvCI CCTCAGC 1 cut(s) 1378
BbvI GCAGC 4 cut(s) 136, 147, 854, 1378
BccI CCATC 6 cut(s) 949, 951, 1187, 1318, 1555, 1841
BcgI CGANNNNNNTGC 4 cut(s) 453, 487, 1494, 1528
BciT130I CCWGG 5 cut(s) 431, 520, 1581, 1727, 1972
BciVI GTATCC 1 cut(s) 1033
BclI TGATCA 1 cut(s) 1815
BcnI CCSGG 4 cut(s) 340, 369, 1900, 1901
BcoDI GTCTC 2 cut(s) 397, 460
BfaI CTAG 7 cut(s) 260, 389, 452, 972, 1101, 1205, 1833
BfmI CTRYAG 3 cut(s) 150, 840, 1140
BfoI RGCGCY 1 cut(s) 548
BfuAI ACCTGC 2 cut(s) 1082, 1169
BfuI GTATCC 1 cut(s) 1033
BisI GCNGC 9 cut(s) 150, 161, 284, 843, 1089, 1334, 1392, 1761, 1956
BlnI CCTAGG 2 cut(s) 259, 1832
BlsI GCNGC 9 cut(s) 151, 162, 285, 844, 1090, 1335, 1393, 1762, 1957
Bme1390I CCNGG 9 cut(s) 340, 369, 431, 520, 1581, 1727, 1900, 1901, 1972
Bme18I GGWCC 2 cut(s) 296, 1862
BmeT110I CYCGRG 1 cut(s) 1899
BmgBI CACGTC 1 cut(s) 1796
BmgT120I GGNCC 7 cut(s) 296, 1197, 1777, 1778, 1836, 1837, 1862
BmiI GGNNCC 7 cut(s) 184, 1198, 1278, 1487, 1612, 1779, 1838
BmrFI CCNGG 9 cut(s) 340, 369, 431, 520, 1581, 1727, 1900, 1901, 1972
BmsI GCATC 3 cut(s) 25, 424, 1942
BmtI GCTAGC 1 cut(s) 1104
BpiI GAAGAC 2 cut(s) 1175, 1358
BplI GAGNNNNNCTC 2 cut(s) 749, 781
BpmI CTGGAG 2 cut(s) 631, 867
Bpu10I CCTNAGC 1 cut(s) 1378
BpuEI CTTGAG 1 cut(s) 932
BpuMI CCSGG 4 cut(s) 340, 369, 1900, 1901
Bsa29I ATCGAT 1 cut(s) 194
BsaAI YACGTR 1 cut(s) 1330
BsaBI GATNNNNATC 2 cut(s) 200, 759
BsaHI GRCGYC 1 cut(s) 249
BsaJI CCNNGG 8 cut(s) 259, 338, 1212, 1291, 1832, 1898, 1899, 1900
BsaWI WCCGGW 2 cut(s) 1313, 1752
BsaXI ACNNNNNCTCC 2 cut(s) 319, 349
Bsc4I CCNNNNNNNGG 6 cut(s) 1482, 1675, 1759, 1775, 1833, 1977
Bse118I RCCGGY 1 cut(s) 1607
Bse1I ACTGG 6 cut(s) 383, 446, 648, 751, 1014, 1428
Bse3DI GCAATG 4 cut(s) 62, 150, 870, 1722
Bse8I GATNNNNATC 2 cut(s) 200, 759
BseBI CCWGG 5 cut(s) 431, 520, 1581, 1727, 1972
BseCI ATCGAT 1 cut(s) 194
BseDI CCNNGG 8 cut(s) 259, 338, 1212, 1291, 1832, 1898, 1899, 1900
BseGI GGATG 3 cut(s) 40, 1198, 1310
BseJI GATNNNNATC 2 cut(s) 200, 759
BseLI CCNNNNNNNGG 6 cut(s) 1482, 1675, 1759, 1775, 1833, 1977
BseMI GCAATG 4 cut(s) 62, 150, 870, 1722
BseMII CTCAG 2 cut(s) 768, 1392
BseNI ACTGG 6 cut(s) 383, 446, 648, 751, 1014, 1428
BseRI GAGGAG 3 cut(s) 385, 448, 1823
BseSI GKGCMC 2 cut(s) 1781, 1840
BseXI GCAGC 4 cut(s) 136, 147, 854, 1378
BseYI CCCAGC 1 cut(s) 1839
BsgI GTGCAG 1 cut(s) 571
Bsh1285I CGRYCG 1 cut(s) 438
BshFI GGCC 8 cut(s) 109, 213, 806, 1199, 1779, 1826, 1838, 1970
BshNI GGYRCC 2 cut(s) 1485, 1610
BshVI ATCGAT 1 cut(s) 194
BsiEI CGRYCG 1 cut(s) 438
BsiHKAI GWGCWC 1 cut(s) 531
BsiHKCI CYCGRG 1 cut(s) 1899
BsiSI CCGG 6 cut(s) 340, 369, 1314, 1608, 1753, 1900
BslFI GGGAC 2 cut(s) 73, 584
BslI CCNNNNNNNGG 6 cut(s) 1482, 1675, 1759, 1775, 1833, 1977
BsmAI GTCTC 2 cut(s) 397, 460
BsmFI GGGAC 2 cut(s) 73, 584
BsnI GGCC 8 cut(s) 109, 213, 806, 1199, 1779, 1826, 1838, 1970
BsoBI CYCGRG 1 cut(s) 1899
Bsp120I GGGCCC 2 cut(s) 1777, 1836
Bsp1286I GDGCHC 4 cut(s) 531, 1599, 1781, 1840
Bsp143I GATC 9 cut(s) 100, 195, 423, 1012, 1053, 1111, 1276, 1617, 1815
Bsp68I TCGCGA 2 cut(s) 400, 463
BspANI GGCC 8 cut(s) 109, 213, 806, 1199, 1779, 1826, 1838, 1970
BspCNI CTCAG 2 cut(s) 769, 1391
BspDI ATCGAT 1 cut(s) 194
BspLI GGNNCC 7 cut(s) 184, 1198, 1278, 1487, 1612, 1779, 1838
BspMAI CTGCAG 2 cut(s) 154, 844
BspMI ACCTGC 2 cut(s) 1082, 1169
BspOI GCTAGC 1 cut(s) 1104
BspPI GGATC 4 cut(s) 1020, 1119, 1271, 1284
BspT107I GGYRCC 2 cut(s) 1485, 1610
BsrDI GCAATG 4 cut(s) 62, 150, 870, 1722
BsrFI RCCGGY 1 cut(s) 1607
BsrI ACTGG 6 cut(s) 383, 446, 648, 751, 1014, 1428
BssAI RCCGGY 1 cut(s) 1607
BssECI CCNNGG 8 cut(s) 259, 338, 1212, 1291, 1832, 1898, 1899, 1900
BssMI GATC 9 cut(s) 100, 195, 423, 1012, 1053, 1111, 1276, 1617, 1815
BssNI GRCGYC 1 cut(s) 249
BssT1I CCWWGG 3 cut(s) 259, 1291, 1832
Bst2UI CCWGG 5 cut(s) 431, 520, 1581, 1727, 1972
Bst4CI ACNGT 8 cut(s) 42, 182, 439, 514, 677, 832, 1387, 1401
Bst6I CTCTTC 1 cut(s) 1638
BstACI GRCGYC 1 cut(s) 249
BstAPI GCANNNNNTGC 1 cut(s) 149
BstBAI YACGTR 1 cut(s) 1330
BstDEI CTNAG 3 cut(s) 49, 777, 1378
BstEII GGTNACC 1 cut(s) 371
BstF5I GGATG 3 cut(s) 40, 1198, 1310
BstH2I RGCGCY 1 cut(s) 548
BstHHI GCGC 5 cut(s) 547, 671, 917, 1347, 1505
BstKTI GATC 9 cut(s) 103, 198, 426, 1015, 1056, 1114, 1279, 1620, 1818
BstMAI GTCTC 2 cut(s) 397, 460
BstMBI GATC 9 cut(s) 100, 195, 423, 1012, 1053, 1111, 1276, 1617, 1815
BstMCI CGRYCG 1 cut(s) 438
BstNI CCWGG 5 cut(s) 431, 520, 1581, 1727, 1972
BstNSI RCATGY 3 cut(s) 160, 1088, 1700
BstPI GGTNACC 1 cut(s) 371
BstSCI CCNGG 9 cut(s) 338, 367, 429, 518, 1579, 1725, 1898, 1899, 1970
BstSFI CTRYAG 3 cut(s) 150, 840, 1140
BstSLI GKGCMC 2 cut(s) 1781, 1840
BstV1I GCAGC 4 cut(s) 136, 147, 854, 1378
BstV2I GAAGAC 2 cut(s) 1175, 1358
BstX2I RGATCY 1 cut(s) 1276
BstXI CCANNNNNNTGG 1 cut(s) 1847
BstYI RGATCY 1 cut(s) 1276
Bsu15I ATCGAT 1 cut(s) 194
BsuI GTATCC 1 cut(s) 1033
BsuRI GGCC 8 cut(s) 109, 213, 806, 1199, 1779, 1826, 1838, 1970
BsuTUI ATCGAT 1 cut(s) 194
BtrI CACGTC 1 cut(s) 1796
BtsCI GGATG 3 cut(s) 40, 1198, 1310
BtsI GCAGTG 1 cut(s) 837
BtsIMutI CAGTG 7 cut(s) 22, 510, 828, 837, 1421, 1438, 1944
BtuMI TCGCGA 2 cut(s) 400, 463
BveI ACCTGC 2 cut(s) 1082, 1169
CaiI CAGNNNCTG 2 cut(s) 1385, 1736
CfoI GCGC 5 cut(s) 547, 671, 917, 1347, 1505
Cfr10I RCCGGY 1 cut(s) 1607
Cfr13I GGNCC 7 cut(s) 296, 1197, 1777, 1778, 1836, 1837, 1862
Cfr9I CCCGGG 1 cut(s) 1899
ClaI ATCGAT 1 cut(s) 194
CseI GACGC 5 cut(s) 712, 778, 968, 1106, 1155
CsiI ACCWGGT 1 cut(s) 518
Csp6I GTAC 6 cut(s) 128, 224, 271, 1327, 1540, 1733
CspCI CAANNNNNGTGG 4 cut(s) 529, 564, 1197, 1232
CviAII CATG 5 cut(s) 157, 1085, 1364, 1697, 1882
CviQI GTAC 6 cut(s) 128, 224, 271, 1327, 1540, 1733
DdeI CTNAG 3 cut(s) 49, 777, 1378
DpnI GATC 9 cut(s) 102, 197, 425, 1014, 1055, 1113, 1278, 1619, 1817
DpnII GATC 9 cut(s) 100, 195, 423, 1012, 1053, 1111, 1276, 1617, 1815
DrdI GACNNNNNNGTC 1 cut(s) 1456
DseDI GACNNNNNNGTC 1 cut(s) 1456
EaeI YGGCCR 3 cut(s) 107, 1824, 1968
Eam1104I CTCTTC 1 cut(s) 1638
EarI CTCTTC 1 cut(s) 1638
EciI GGCGGA 1 cut(s) 47
Eco130I CCWWGG 3 cut(s) 259, 1291, 1832
Eco147I AGGCCT 1 cut(s) 213
Eco24I GRGCYC 3 cut(s) 1599, 1781, 1840
Eco47I GGWCC 2 cut(s) 296, 1862
Eco47III AGCGCT 1 cut(s) 546
Eco57I CTGAAG 2 cut(s) 711, 1968
Eco88I CYCGRG 1 cut(s) 1899
Eco91I GGTNACC 1 cut(s) 371
EcoO109I RGGNCCY 3 cut(s) 296, 1836, 1862
EcoO65I GGTNACC 1 cut(s) 371
EcoRII CCWGG 5 cut(s) 429, 518, 1579, 1725, 1970
EcoT14I CCWWGG 3 cut(s) 259, 1291, 1832
EcoT38I GRGCYC 3 cut(s) 1599, 1781, 1840
ErhI CCWWGG 3 cut(s) 259, 1291, 1832
FaeI CATG 5 cut(s) 160, 1088, 1367, 1700, 1885
FaqI GGGAC 2 cut(s) 73, 584
FatI CATG 5 cut(s) 156, 1084, 1363, 1696, 1881
FauI CCCGC 5 cut(s) 387, 1138, 1694, 1768, 1878
FbaI TGATCA 1 cut(s) 1815
Fnu4HI GCNGC 9 cut(s) 150, 161, 284, 843, 1089, 1334, 1392, 1761, 1956
FokI GGATG 3 cut(s) 47, 1205, 1297
FriOI GRGCYC 3 cut(s) 1599, 1781, 1840
Fsp4HI GCNGC 9 cut(s) 150, 161, 284, 843, 1089, 1334, 1392, 1761, 1956
FspBI CTAG 7 cut(s) 260, 389, 452, 972, 1101, 1205, 1833
GlaI GCGC 5 cut(s) 546, 670, 916, 1346, 1504
GluI GCNGC 9 cut(s) 150, 161, 284, 843, 1089, 1334, 1392, 1761, 1956
GsaI CCCAGC 1 cut(s) 1843
GsuI CTGGAG 2 cut(s) 631, 867
HaeII RGCGCY 1 cut(s) 548
HaeIII GGCC 8 cut(s) 109, 213, 806, 1199, 1779, 1826, 1838, 1970
HapII CCGG 6 cut(s) 340, 369, 1314, 1608, 1753, 1900
HgaI GACGC 5 cut(s) 712, 778, 968, 1106, 1155
HhaI GCGC 5 cut(s) 547, 671, 917, 1347, 1505
Hin1I GRCGYC 1 cut(s) 249
Hin1II CATG 5 cut(s) 160, 1088, 1367, 1700, 1885
Hin6I GCGC 5 cut(s) 545, 669, 915, 1345, 1503
HinP1I GCGC 5 cut(s) 545, 669, 915, 1345, 1503
HincII GTYRAC 3 cut(s) 45, 744, 835
HindII GTYRAC 3 cut(s) 45, 744, 835
HindIII AAGCTT 1 cut(s) 1266
HinfI GANTC 5 cut(s) 661, 711, 760, 1024, 1240
HpaI GTTAAC 1 cut(s) 45
HpaII CCGG 6 cut(s) 340, 369, 1314, 1608, 1753, 1900
HphI GGTGA 2 cut(s) 383, 410
Hpy166II GTNNAC 5 cut(s) 45, 540, 744, 835, 1723
Hpy188I TCNGA 9 cut(s) 206, 244, 691, 786, 1066, 1171, 1519, 1793, 1820
Hpy188III TCNNGA 7 cut(s) 399, 462, 887, 937, 949, 1571, 1621
Hpy8I GTNNAC 5 cut(s) 45, 540, 744, 835, 1723
Hpy99I CGWCG 6 cut(s) 182, 251, 254, 1171, 1405, 1553
HpyAV CCTTC 8 cut(s) 144, 180, 360, 851, 910, 1072, 1700, 1853
HpyCH4III ACNGT 8 cut(s) 42, 182, 439, 514, 677, 832, 1387, 1401
HpyCH4IV ACGT 4 cut(s) 249, 1329, 1529, 1795
HpyCH4V TGCA 9 cut(s) 38, 67, 143, 152, 588, 842, 1225, 1696, 1741
HpyF3I CTNAG 3 cut(s) 49, 777, 1378
HpySE526I ACGT 4 cut(s) 249, 1329, 1529, 1795
Hsp92I GRCGYC 1 cut(s) 249
Hsp92II CATG 5 cut(s) 160, 1088, 1367, 1700, 1885
HspAI GCGC 5 cut(s) 545, 669, 915, 1345, 1503
Ksp22I TGATCA 1 cut(s) 1815
KspAI GTTAAC 1 cut(s) 45
Kzo9I GATC 9 cut(s) 100, 195, 423, 1012, 1053, 1111, 1276, 1617, 1815
LmnI GCTCC 1 cut(s) 342
Lsp1109I GCAGC 4 cut(s) 136, 147, 854, 1378
LweI GCATC 3 cut(s) 25, 424, 1942
MabI ACCWGGT 1 cut(s) 518
MaeI CTAG 7 cut(s) 260, 389, 452, 972, 1101, 1205, 1833
MaeII ACGT 4 cut(s) 249, 1329, 1529, 1795
MaeIII GTNAC 7 cut(s) 371, 514, 650, 700, 1148, 1525, 1660
MalI GATC 9 cut(s) 102, 197, 425, 1014, 1055, 1113, 1278, 1619, 1817
MboI GATC 9 cut(s) 100, 195, 423, 1012, 1053, 1111, 1276, 1617, 1815
MflI RGATCY 1 cut(s) 1276
MhlI GDGCHC 4 cut(s) 531, 1599, 1781, 1840
MlsI TGGCCA 3 cut(s) 109, 1826, 1970
MluCI AATT 4 cut(s) 22, 315, 1128, 1235
MluNI TGGCCA 3 cut(s) 109, 1826, 1970
MlyI GAGTC 1 cut(s) 1018
MmeI TCCRAC 3 cut(s) 58, 1149, 1693
Mox20I TGGCCA 3 cut(s) 109, 1826, 1970
MscI TGGCCA 3 cut(s) 109, 1826, 1970
MseI TTAA 3 cut(s) 44, 279, 798
Msp20I TGGCCA 3 cut(s) 109, 1826, 1970
MspA1I CMGCKG 2 cut(s) 845, 1658
MspI CCGG 6 cut(s) 340, 369, 1314, 1608, 1753, 1900
MspR9I CCNGG 9 cut(s) 340, 369, 431, 520, 1581, 1727, 1900, 1901, 1972
MvaI CCWGG 5 cut(s) 431, 520, 1581, 1727, 1972
NciI CCSGG 4 cut(s) 340, 369, 1900, 1901
NdeII GATC 9 cut(s) 100, 195, 423, 1012, 1053, 1111, 1276, 1617, 1815
NheI GCTAGC 1 cut(s) 1100
NlaIII CATG 5 cut(s) 160, 1088, 1367, 1700, 1885
NlaIV GGNNCC 7 cut(s) 184, 1198, 1278, 1487, 1612, 1779, 1838
NmuCI GTSAC 4 cut(s) 371, 514, 700, 1148
NruI TCGCGA 2 cut(s) 400, 463
NspI RCATGY 3 cut(s) 160, 1088, 1700
PaeI GCATGC 1 cut(s) 160
PceI AGGCCT 1 cut(s) 213
PcsI WCGNNNNNNNCGW 1 cut(s) 1539
PfeI GAWTC 4 cut(s) 661, 711, 760, 1240
PflFI GACNNNGTC 2 cut(s) 248, 1165
PkrI GCNGC 9 cut(s) 151, 162, 285, 844, 1090, 1335, 1393, 1762, 1957
PleI GAGTC 1 cut(s) 1018
PpsI GAGTC 1 cut(s) 1018
Ppu21I YACGTR 1 cut(s) 1330
PpuMI RGGWCCY 2 cut(s) 296, 1862
PsiI TTATAA 1 cut(s) 1908
Psp5II RGGWCCY 2 cut(s) 296, 1862
Psp6I CCWGG 5 cut(s) 429, 518, 1579, 1725, 1970
PspEI GGTNACC 1 cut(s) 371
PspFI CCCAGC 1 cut(s) 1839
PspGI CCWGG 5 cut(s) 429, 518, 1579, 1725, 1970
PspN4I GGNNCC 7 cut(s) 184, 1198, 1278, 1487, 1612, 1779, 1838
PspOMI GGGCCC 2 cut(s) 1777, 1836
PspPI GGNCC 7 cut(s) 296, 1197, 1777, 1778, 1836, 1837, 1862
PspPPI RGGWCCY 2 cut(s) 296, 1862
PstI CTGCAG 2 cut(s) 154, 844
PstNI CAGNNNCTG 2 cut(s) 1385, 1736
PsuI RGATCY 1 cut(s) 1276
PsyI GACNNNGTC 2 cut(s) 248, 1165
PvuII CAGCTG 1 cut(s) 845
RruI TCGCGA 2 cut(s) 400, 463
RsaI GTAC 6 cut(s) 129, 225, 272, 1328, 1541, 1734
RsaNI GTAC 6 cut(s) 128, 224, 271, 1327, 1540, 1733
SaqAI TTAA 3 cut(s) 44, 279, 798
SatI GCNGC 9 cut(s) 150, 161, 284, 843, 1089, 1334, 1392, 1761, 1956
Sau3AI GATC 9 cut(s) 100, 195, 423, 1012, 1053, 1111, 1276, 1617, 1815
Sau96I GGNCC 7 cut(s) 296, 1197, 1777, 1778, 1836, 1837, 1862
SchI GAGTC 1 cut(s) 1018
ScrFI CCNGG 9 cut(s) 340, 369, 431, 520, 1581, 1727, 1900, 1901, 1972
SduI GDGCHC 4 cut(s) 531, 1599, 1781, 1840
SexAI ACCWGGT 1 cut(s) 518
SfaNI GCATC 3 cut(s) 25, 424, 1942
SfcI CTRYAG 3 cut(s) 150, 840, 1140
SinI GGWCC 2 cut(s) 296, 1862
SmaI CCCGGG 1 cut(s) 1901
SmlI CTYRAG 1 cut(s) 947
SmoI CTYRAG 1 cut(s) 947
SphI GCATGC 1 cut(s) 160
Sse9I AATT 4 cut(s) 22, 315, 1128, 1235
SseBI AGGCCT 1 cut(s) 213
SspMI CTAG 7 cut(s) 260, 389, 452, 972, 1101, 1205, 1833
StuI AGGCCT 1 cut(s) 213
StyD4I CCNGG 9 cut(s) 338, 367, 429, 518, 1579, 1725, 1898, 1899, 1970
StyI CCWWGG 3 cut(s) 259, 1291, 1832
TaaI ACNGT 8 cut(s) 42, 182, 439, 514, 677, 832, 1387, 1401
TaiI ACGT 4 cut(s) 252, 1332, 1532, 1798
TaqI TCGA 9 cut(s) 194, 216, 252, 767, 903, 936, 1403, 1599, 1616
TaqII GACCGA 1 cut(s) 673
TasI AATT 4 cut(s) 22, 315, 1128, 1235
TatI WGTACW 2 cut(s) 127, 270
TauI GCSGC 5 cut(s) 286, 1091, 1336, 1763, 1958
TfiI GAWTC 4 cut(s) 661, 711, 760, 1240
Tru1I TTAA 3 cut(s) 44, 279, 798
Tru9I TTAA 3 cut(s) 44, 279, 798
TscAI CASTG 7 cut(s) 22, 517, 835, 844, 1428, 1438, 1951
TseFI GTSAC 4 cut(s) 371, 514, 700, 1148
TseI GCWGC 4 cut(s) 149, 160, 842, 1391
Tsp45I GTSAC 4 cut(s) 371, 514, 700, 1148
TspDTI ATGAA 4 cut(s) 190, 859, 1815, 1872
TspGWI ACGGA 1 cut(s) 226
TspMI CCCGGG 1 cut(s) 1899
TspRI CASTG 7 cut(s) 22, 517, 835, 844, 1428, 1438, 1951
Tth111I GACNNNGTC 2 cut(s) 248, 1165
VpaK11BI GGWCC 2 cut(s) 296, 1862
XceI RCATGY 3 cut(s) 160, 1088, 1700
XmaI CCCGGG 1 cut(s) 1899
XmaJI CCTAGG 2 cut(s) 259, 1832
XspI CTAG 7 cut(s) 260, 389, 452, 972, 1101, 1205, 1833
ZraI GACGTC 1 cut(s) 250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.