Sister chromatid cohesion protein PDS5 homolog
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 131, 558 |
| AccII | CGCG | 3 cut(s) | 212, 371, 546 |
| AciI | CCGC | 8 cut(s) | 110, 151, 210, 369, 410, 436, 544, 546 |
| AclWI | GGATC | 1 cut(s) | 134 |
| AcoI | YGGCCR | 1 cut(s) | 468 |
| AcsI | RAATTY | 1 cut(s) | 440 |
| AfaI | GTAC | 2 cut(s) | 88, 103 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 106, 160, 581 |
| AflII | CTTAAG | 1 cut(s) | 245 |
| AgsI | TTSAA | 5 cut(s) | 25, 34, 176, 218, 256 |
| AluBI | AGCT | 1 cut(s) | 120 |
| AluI | AGCT | 1 cut(s) | 120 |
| Alw26I | GTCTC | 1 cut(s) | 211 |
| AlwI | GGATC | 1 cut(s) | 134 |
| AoxI | GGCC | 4 cut(s) | 240, 291, 468, 607 |
| ApoI | RAATTY | 1 cut(s) | 440 |
| AspLEI | GCGC | 1 cut(s) | 551 |
| AspS9I | GGNCC | 4 cut(s) | 241, 395, 490, 607 |
| AsuC2I | CCSGG | 3 cut(s) | 537, 582, 606 |
| AsuHPI | GGTGA | 1 cut(s) | 391 |
| AvaII | GGWCC | 2 cut(s) | 395, 490 |
| BanII | GRGCYC | 1 cut(s) | 273 |
| BccI | CCATC | 1 cut(s) | 370 |
| BceAI | ACGGC | 1 cut(s) | 483 |
| BcnI | CCSGG | 3 cut(s) | 537, 582, 606 |
| BcoDI | GTCTC | 1 cut(s) | 211 |
| BfaI | CTAG | 1 cut(s) | 636 |
| BfrI | CTTAAG | 1 cut(s) | 245 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 338 |
| BisI | GCNGC | 3 cut(s) | 111, 369, 547 |
| BlsI | GCNGC | 3 cut(s) | 112, 370, 548 |
| Bme1390I | CCNGG | 3 cut(s) | 537, 582, 606 |
| Bme18I | GGWCC | 2 cut(s) | 395, 490 |
| BmgT120I | GGNCC | 4 cut(s) | 241, 395, 490, 607 |
| BmiI | GGNNCC | 2 cut(s) | 270, 397 |
| BmrFI | CCNGG | 3 cut(s) | 537, 582, 606 |
| BmsI | GCATC | 2 cut(s) | 319, 421 |
| BpuEI | CTTGAG | 3 cut(s) | 28, 141, 326 |
| BpuMI | CCSGG | 3 cut(s) | 537, 582, 606 |
| BsaJI | CCNNGG | 4 cut(s) | 73, 288, 535, 544 |
| BsaWI | WCCGGW | 3 cut(s) | 224, 352, 619 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 106, 160, 581 |
| BseDI | CCNNGG | 4 cut(s) | 73, 288, 535, 544 |
| BseGI | GGATG | 3 cut(s) | 190, 199, 361 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 106, 160, 581 |
| BseRI | GAGGAG | 1 cut(s) | 31 |
| BseX3I | CGGCCG | 1 cut(s) | 468 |
| Bsh1236I | CGCG | 3 cut(s) | 212, 371, 546 |
| Bsh1285I | CGRYCG | 3 cut(s) | 410, 471, 544 |
| BshFI | GGCC | 4 cut(s) | 242, 293, 470, 609 |
| BsiEI | CGRYCG | 3 cut(s) | 410, 471, 544 |
| BsiSI | CCGG | 6 cut(s) | 225, 353, 537, 581, 605, 620 |
| BsiWI | CGTACG | 1 cut(s) | 101 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 106, 160, 581 |
| BsmAI | GTCTC | 1 cut(s) | 211 |
| BsnI | GGCC | 4 cut(s) | 242, 293, 470, 609 |
| Bsp1286I | GDGCHC | 1 cut(s) | 273 |
| Bsp143I | GATC | 2 cut(s) | 139, 363 |
| Bsp19I | CCATGG | 1 cut(s) | 288 |
| BspACI | CCGC | 8 cut(s) | 110, 151, 210, 369, 410, 436, 544, 546 |
| BspANI | GGCC | 4 cut(s) | 242, 293, 470, 609 |
| BspFNI | CGCG | 3 cut(s) | 212, 371, 546 |
| BspLI | GGNNCC | 2 cut(s) | 270, 397 |
| BspPI | GGATC | 1 cut(s) | 134 |
| BspTI | CTTAAG | 1 cut(s) | 245 |
| BssECI | CCNNGG | 4 cut(s) | 73, 288, 535, 544 |
| BssMI | GATC | 2 cut(s) | 139, 363 |
| BssT1I | CCWWGG | 2 cut(s) | 73, 288 |
| Bst4CI | ACNGT | 4 cut(s) | 101, 106, 129, 494 |
| Bst6I | CTCTTC | 1 cut(s) | 159 |
| BstAFI | CTTAAG | 1 cut(s) | 245 |
| BstDEI | CTNAG | 1 cut(s) | 264 |
| BstDSI | CCRYGG | 2 cut(s) | 288, 544 |
| BstF5I | GGATG | 3 cut(s) | 190, 199, 361 |
| BstFNI | CGCG | 3 cut(s) | 212, 371, 546 |
| BstHHI | GCGC | 1 cut(s) | 551 |
| BstKTI | GATC | 2 cut(s) | 142, 366 |
| BstMAI | GTCTC | 1 cut(s) | 211 |
| BstMBI | GATC | 2 cut(s) | 139, 363 |
| BstMCI | CGRYCG | 3 cut(s) | 410, 471, 544 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 338, 531, 546 |
| BstSCI | CCNGG | 3 cut(s) | 535, 580, 604 |
| BstUI | CGCG | 3 cut(s) | 212, 371, 546 |
| BstZI | CGGCCG | 1 cut(s) | 468 |
| BsuRI | GGCC | 4 cut(s) | 242, 293, 470, 609 |
| BtgI | CCRYGG | 2 cut(s) | 288, 544 |
| BtsCI | GGATG | 3 cut(s) | 190, 199, 361 |
| BtsI | GCAGTG | 1 cut(s) | 532 |
| BtsIMutI | CAGTG | 1 cut(s) | 532 |
| CfoI | GCGC | 1 cut(s) | 551 |
| Cfr13I | GGNCC | 4 cut(s) | 241, 395, 490, 607 |
| Cfr42I | CCGCGG | 1 cut(s) | 547 |
| CseI | GACGC | 1 cut(s) | 58 |
| Csp6I | GTAC | 2 cut(s) | 87, 102 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 434, 469 |
| CviAII | CATG | 2 cut(s) | 289, 344 |
| CviJI | RGCY | 9 cut(s) | 120, 242, 271, 293, 418, 470, 507, 534, 609 |
| CviKI_1 | RGCY | 9 cut(s) | 120, 242, 271, 293, 418, 470, 507, 534, 609 |
| CviQI | GTAC | 2 cut(s) | 87, 102 |
| DdeI | CTNAG | 1 cut(s) | 264 |
| DpnI | GATC | 2 cut(s) | 141, 365 |
| DpnII | GATC | 2 cut(s) | 139, 363 |
| EaeI | YGGCCR | 1 cut(s) | 468 |
| EagI | CGGCCG | 1 cut(s) | 468 |
| Eam1104I | CTCTTC | 1 cut(s) | 159 |
| EarI | CTCTTC | 1 cut(s) | 159 |
| EclXI | CGGCCG | 1 cut(s) | 468 |
| Eco130I | CCWWGG | 2 cut(s) | 73, 288 |
| Eco24I | GRGCYC | 1 cut(s) | 273 |
| Eco32I | GATATC | 1 cut(s) | 261 |
| Eco47I | GGWCC | 2 cut(s) | 395, 490 |
| Eco52I | CGGCCG | 1 cut(s) | 468 |
| EcoRV | GATATC | 1 cut(s) | 261 |
| EcoT14I | CCWWGG | 2 cut(s) | 73, 288 |
| EcoT38I | GRGCYC | 1 cut(s) | 273 |
| ErhI | CCWWGG | 2 cut(s) | 73, 288 |
| FaeI | CATG | 2 cut(s) | 292, 347 |
| FaiI | YATR | 8 cut(s) | 85, 138, 290, 325, 327, 345, 504, 591 |
| FatI | CATG | 2 cut(s) | 288, 343 |
| FauNDI | CATATG | 1 cut(s) | 325 |
| FblI | GTMKAC | 2 cut(s) | 131, 558 |
| Fnu4HI | GCNGC | 3 cut(s) | 111, 369, 547 |
| FokI | GGATG | 3 cut(s) | 197, 206, 368 |
| FriOI | GRGCYC | 1 cut(s) | 273 |
| Fsp4HI | GCNGC | 3 cut(s) | 111, 369, 547 |
| FspBI | CTAG | 1 cut(s) | 636 |
| GlaI | GCGC | 1 cut(s) | 550 |
| GluI | GCNGC | 3 cut(s) | 111, 369, 547 |
| HaeIII | GGCC | 4 cut(s) | 242, 293, 470, 609 |
| HapII | CCGG | 6 cut(s) | 225, 353, 537, 581, 605, 620 |
| HgaI | GACGC | 1 cut(s) | 58 |
| HhaI | GCGC | 1 cut(s) | 551 |
| Hin1II | CATG | 2 cut(s) | 292, 347 |
| Hin6I | GCGC | 1 cut(s) | 549 |
| HinP1I | GCGC | 1 cut(s) | 549 |
| HinfI | GANTC | 2 cut(s) | 55, 560 |
| HpaII | CCGG | 6 cut(s) | 225, 353, 537, 581, 605, 620 |
| HphI | GGTGA | 1 cut(s) | 391 |
| Hpy166II | GTNNAC | 4 cut(s) | 132, 321, 559, 602 |
| Hpy188I | TCNGA | 2 cut(s) | 395, 576 |
| Hpy188III | TCNNGA | 2 cut(s) | 16, 176 |
| Hpy8I | GTNNAC | 4 cut(s) | 132, 321, 559, 602 |
| Hpy99I | CGWCG | 1 cut(s) | 319 |
| HpyAV | CCTTC | 2 cut(s) | 409, 481 |
| HpyCH4III | ACNGT | 4 cut(s) | 101, 106, 129, 494 |
| HpyCH4IV | ACGT | 2 cut(s) | 81, 317 |
| HpyCH4V | TGCA | 1 cut(s) | 525 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 338, 531, 546 |
| HpyF3I | CTNAG | 1 cut(s) | 264 |
| HpySE526I | ACGT | 2 cut(s) | 81, 317 |
| Hsp92II | CATG | 2 cut(s) | 292, 347 |
| HspAI | GCGC | 1 cut(s) | 549 |
| KspI | CCGCGG | 1 cut(s) | 547 |
| Kzo9I | GATC | 2 cut(s) | 139, 363 |
| LmnI | GCTCC | 1 cut(s) | 268 |
| LpnPI | CCDG | 6 cut(s) | 238, 366, 550, 594, 618, 633 |
| LweI | GCATC | 2 cut(s) | 319, 421 |
| MaeI | CTAG | 1 cut(s) | 636 |
| MaeII | ACGT | 2 cut(s) | 81, 317 |
| MalI | GATC | 2 cut(s) | 141, 365 |
| MboI | GATC | 2 cut(s) | 139, 363 |
| MboII | GAAGA | 4 cut(s) | 176, 244, 268, 385 |
| MfeI | CAATTG | 1 cut(s) | 251 |
| MhlI | GDGCHC | 1 cut(s) | 273 |
| MluCI | AATT | 4 cut(s) | 218, 251, 440, 457 |
| MlyI | GAGTC | 1 cut(s) | 554 |
| MnlI | CCTC | 7 cut(s) | 52, 160, 165, 175, 184, 414, 616 |
| MseI | TTAA | 1 cut(s) | 246 |
| MspA1I | CMGCKG | 1 cut(s) | 546 |
| MspCI | CTTAAG | 1 cut(s) | 245 |
| MspI | CCGG | 6 cut(s) | 225, 353, 537, 581, 605, 620 |
| MspR9I | CCNGG | 3 cut(s) | 537, 582, 606 |
| MunI | CAATTG | 1 cut(s) | 251 |
| MvnI | CGCG | 3 cut(s) | 212, 371, 546 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 338, 531, 546 |
| NciI | CCSGG | 3 cut(s) | 537, 582, 606 |
| NcoI | CCATGG | 1 cut(s) | 288 |
| NdeI | CATATG | 1 cut(s) | 325 |
| NdeII | GATC | 2 cut(s) | 139, 363 |
| NlaIII | CATG | 2 cut(s) | 292, 347 |
| NlaIV | GGNNCC | 2 cut(s) | 270, 397 |
| NmeAIII | GCCGAG | 1 cut(s) | 218 |
| PfeI | GAWTC | 1 cut(s) | 55 |
| Pfl23II | CGTACG | 1 cut(s) | 101 |
| PkrI | GCNGC | 3 cut(s) | 112, 370, 548 |
| PleI | GAGTC | 1 cut(s) | 554 |
| PpsI | GAGTC | 1 cut(s) | 554 |
| PspLI | CGTACG | 1 cut(s) | 101 |
| PspN4I | GGNNCC | 2 cut(s) | 270, 397 |
| PspPI | GGNCC | 4 cut(s) | 241, 395, 490, 607 |
| RsaI | GTAC | 2 cut(s) | 88, 103 |
| RsaNI | GTAC | 2 cut(s) | 87, 102 |
| SacII | CCGCGG | 1 cut(s) | 547 |
| SaqAI | TTAA | 1 cut(s) | 246 |
| SatI | GCNGC | 3 cut(s) | 111, 369, 547 |
| Sau3AI | GATC | 2 cut(s) | 139, 363 |
| Sau96I | GGNCC | 4 cut(s) | 241, 395, 490, 607 |
| SchI | GAGTC | 1 cut(s) | 554 |
| ScrFI | CCNGG | 3 cut(s) | 537, 582, 606 |
| SduI | GDGCHC | 1 cut(s) | 273 |
| SetI | ASST | 5 cut(s) | 84, 122, 137, 171, 320 |
| SfaNI | GCATC | 2 cut(s) | 319, 421 |
| Sfr303I | CCGCGG | 1 cut(s) | 547 |
| SgrBI | CCGCGG | 1 cut(s) | 547 |
| SinI | GGWCC | 2 cut(s) | 395, 490 |
| SmlI | CTYRAG | 4 cut(s) | 43, 156, 245, 305 |
| SmoI | CTYRAG | 4 cut(s) | 43, 156, 245, 305 |
| Sse9I | AATT | 4 cut(s) | 218, 251, 440, 457 |
| SsiI | CCGC | 8 cut(s) | 110, 151, 210, 369, 410, 436, 544, 546 |
| SspMI | CTAG | 1 cut(s) | 636 |
| StyD4I | CCNGG | 3 cut(s) | 535, 580, 604 |
| StyI | CCWWGG | 2 cut(s) | 73, 288 |
| TaaI | ACNGT | 4 cut(s) | 101, 106, 129, 494 |
| TaiI | ACGT | 2 cut(s) | 84, 320 |
| TaqI | TCGA | 4 cut(s) | 406, 485, 563, 595 |
| TasI | AATT | 4 cut(s) | 218, 251, 440, 457 |
| TauI | GCSGC | 3 cut(s) | 113, 371, 549 |
| TfiI | GAWTC | 1 cut(s) | 55 |
| Tru1I | TTAA | 1 cut(s) | 246 |
| Tru9I | TTAA | 1 cut(s) | 246 |
| TscAI | CASTG | 1 cut(s) | 532 |
| TspDTI | ATGAA | 1 cut(s) | 372 |
| TspRI | CASTG | 1 cut(s) | 532 |
| Vha464I | CTTAAG | 1 cut(s) | 245 |
| VpaK11BI | GGWCC | 2 cut(s) | 395, 490 |
| XapI | RAATTY | 1 cut(s) | 440 |
| XmiI | GTMKAC | 2 cut(s) | 131, 558 |
| XspI | CTAG | 1 cut(s) | 636 |