Rmu_sc0005144.1_g000014

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005144.1
OG0000057
Physical Location & Seq
Reverse (-)
66016 .. 67746
1731 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005144.1_g000014.1.cds

Sequence Viewer

Length: 1503 bp
atggcccagcagcccaccgaatctgctgtagcgtatcttcaacgcttccagattcagaaagccaaactgagtgtggtcctgcttgagaaggaattagtcaagttggcagtcaagagtttggaaccacgccagcaaaaaaagcaacatggcagcatgatccagtcaatgggagaacttatcatagatgtaggtagctttgagcatttcctcagagaaaccgatgtcaggaaaaatgcatccaaagggacatatatgccagggaagcatcgcactgtagcagctttgacctaccagccgactacctatgatccctactactaccaccaagaggaagagttgttccaagatcaagatgaagaggagaatgacgtctccgcgttagaattgacaggtaggaagaactcagccctcaagcagttaaagatatctaaggaacctgtcaaactcaagtctatggctttcaccaaacctgaattcgcgacatatacatatgacgccaataaggcacatgagattttagaggagatgattgccgcgaagatgctaaaggatcaaatccaagtatggctcaataatggtagcttgcaggtagagccttcattgaccatcacagcgcttgtagacttgaacccttttccagatactagagtcggtatggttgatgtgaactggcccaagaagagcaagaggaaaccaaccctggatctaactacaaagaggaaagaaaagagggatgaaggagaggaaactcctgtgaagaagaaagctaagcctatcagcgaggcctcaccagtgccttctagcccaaaggcgagagatgaggtaaaatcaccaccatccccaaaagattccaacctattcaagaaattgaaagtggctgcggccgatcataaacaagaaggaaaggcttggaatgagcacaaagatgtagtgaccaaaccttacattccgcctgcttcaacatccaccatcaaggaaggtaaatggtacaccagagagaaggggaaagcagtggaaatcagcccctctaagaaaaggaaattgcagcgaaggttcggagaggccaagcgtgctttagaagctctggatcagggtctgattaagccgtcacaattggttaaatctcctgagcaatatcagaaggagatggaggcattggctgctaagccattggtggcttctcgcagctttcagaagcaggcgcgttcagaattaggggcctctaagcctagtgttttctgcaggatcacgaaggagaggacacctccgccagctaggaaagacaattcgccaactaggtggccacatgtcagaggcaggttgttacgagaggaaccagaagccaaaccctcagtgtttgagagattggggggcaagggcagtactgcagaagatctacagtggagacctaagaaggtccaaagtctggtggttgcgccctcaaaggaaatacttgcaggggaacaaggaccaaactcgccattagagatggccgaaccgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

500

Amino Acids

56.43

Weight (kDa)

9.57

Isoelectric Point (pI)

52.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000057)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00341 FvH4_2g18201 FvH4_2g24491 FvH4_2g24511 FvH4_3g22961 FvH4_3g33532 FvH4_3g33534 FvH4_4g05275 FvH4_4g12372 FvH4_5g20143 FvH4_7g12392
pyrus_communis pycom12g16120
rosa_chinensis RchiOBHm_Chr5g0023531 RchiOBHm_Chr6g0271201
rosa_laevigata RLG00000030639
rosa_multiflora Rmu_co8016136.1_g000001 Rmu_co8027180.1_g000001 Rmu_co8041016.1_g000001 Rmu_co8052812.1_g000001 Rmu_co8152468.1_g000001 Rmu_co8165796.1_g000001 Rmu_co8170214.1_g000001 Rmu_co8227433.1_g000001 Rmu_co8241379.1_g000001 Rmu_co8254305.1_g000001 Rmu_co8258647.1_g000001 Rmu_co8265535.1_g000002 Rmu_co8276845.1_g000001 Rmu_co8296303.1_g000001 Rmu_co8304827.1_g000001 Rmu_co8308345.1_g000001 Rmu_co8320493.1_g000002 Rmu_co8326955.1_g000001 Rmu_co8331007.1_g000001 Rmu_co8335625.1_g000001 Rmu_co8354465.1_g000001 Rmu_co8360201.1_g000001 Rmu_co8362075.1_g000002 Rmu_co8362991.1_g000001 Rmu_co8364567.1_g000001 Rmu_co8365273.1_g000001 Rmu_co8387267.1_g000001 Rmu_co8395251.1_g000002 Rmu_co8396677.1_g000001 Rmu_co8457659.1_g000001 Rmu_co8478117.1_g000001 Rmu_co8487163.1_g000001 Rmu_co8498169.1_g000001 Rmu_sc0000029.1_g000022 Rmu_sc0000063.1_g000007 Rmu_sc0000112.1_g000020 Rmu_sc0000146.1_g000006 Rmu_sc0000245.1_g000015 Rmu_sc0000276.1_g000036 Rmu_sc0000334.1_g000033 Rmu_sc0000334.1_g000034 Rmu_sc0000434.1_g000019 Rmu_sc0000441.1_g000118 Rmu_sc0000533.1_g000054 Rmu_sc0000533.1_g000055 Rmu_sc0000595.1_g000041 Rmu_sc0000663.1_g000019 Rmu_sc0000673.1_g000002 Rmu_sc0000698.1_g000102 Rmu_sc0000745.1_g000007 Rmu_sc0000768.1_g000018 Rmu_sc0000811.1_g000012 Rmu_sc0000826.1_g000009 Rmu_sc0000826.1_g000011 Rmu_sc0001051.1_g000042 Rmu_sc0001051.1_g000043 Rmu_sc0001148.1_g000014 Rmu_sc0001198.1_g000021 Rmu_sc0001227.1_g000008 Rmu_sc0001250.1_g000028 Rmu_sc0001395.1_g000019 Rmu_sc0001395.1_g000020 Rmu_sc0001396.1_g000002 Rmu_sc0001424.1_g000007 Rmu_sc0001455.1_g000025 Rmu_sc0001455.1_g000029 Rmu_sc0001499.1_g000036 Rmu_sc0001539.1_g000001 Rmu_sc0001562.1_g000027 Rmu_sc0001563.1_g000024 Rmu_sc0001719.1_g000022 Rmu_sc0001796.1_g000008 Rmu_sc0001884.1_g000022 Rmu_sc0001903.1_g000018 Rmu_sc0002041.1_g000012 Rmu_sc0002096.1_g000002 Rmu_sc0002126.1_g000027 Rmu_sc0002181.1_g000010 Rmu_sc0002259.1_g000004 Rmu_sc0002279.1_g000018 Rmu_sc0002312.1_g000060 Rmu_sc0002383.1_g000011 Rmu_sc0002401.1_g000012 Rmu_sc0002509.1_g000028 Rmu_sc0002569.1_g000008 Rmu_sc0002587.1_g000037 Rmu_sc0002665.1_g000006 Rmu_sc0002698.1_g000018 Rmu_sc0002724.1_g000002 Rmu_sc0002727.1_g000011 Rmu_sc0002927.1_g000055 Rmu_sc0002927.1_g000056 Rmu_sc0002943.1_g000009 Rmu_sc0002943.1_g000023 Rmu_sc0002998.1_g000001 Rmu_sc0003089.1_g000036 Rmu_sc0003127.1_g000022 Rmu_sc0003127.1_g000040 Rmu_sc0003207.1_g000010 Rmu_sc0003207.1_g000011 Rmu_sc0003275.1_g000034 Rmu_sc0003275.1_g000036 Rmu_sc0003337.1_g000047 Rmu_sc0003376.1_g000004 Rmu_sc0003522.1_g000024 Rmu_sc0003613.1_g000007 Rmu_sc0003708.1_g000026 Rmu_sc0003784.1_g000018 Rmu_sc0004079.1_g000005 Rmu_sc0004092.1_g000017 Rmu_sc0004168.1_g000058 Rmu_sc0004174.1_g000019 Rmu_sc0004199.1_g000049 Rmu_sc0004230.1_g000005 Rmu_sc0004283.1_g000021 Rmu_sc0004283.1_g000022 Rmu_sc0004314.1_g000017 Rmu_sc0004538.1_g000006 Rmu_sc0004542.1_g000011 Rmu_sc0004602.1_g000024 Rmu_sc0004641.1_g000006 Rmu_sc0004862.1_g000011 Rmu_sc0004941.1_g000043 Rmu_sc0005003.1_g000003 Rmu_sc0005112.1_g000018 Rmu_sc0005144.1_g000014 Rmu_sc0005266.1_g000014 Rmu_sc0005418.1_g000004 Rmu_sc0005627.1_g000006 Rmu_sc0005652.1_g000022 Rmu_sc0005747.1_g000032 Rmu_sc0005982.1_g000013 Rmu_sc0006050.1_g000017 Rmu_sc0006059.1_g000035 Rmu_sc0006128.1_g000002 Rmu_sc0006228.1_g000009 Rmu_sc0006243.1_g000009 Rmu_sc0006300.1_g000004 Rmu_sc0006463.1_g000007 Rmu_sc0006579.1_g000016 Rmu_sc0006595.1_g000011 Rmu_sc0006624.1_g000006 Rmu_sc0006624.1_g000007 Rmu_sc0006624.1_g000008 Rmu_sc0006674.1_g000025 Rmu_sc0006792.1_g000013 Rmu_sc0006872.1_g000022 Rmu_sc0006984.1_g000009 Rmu_sc0006984.1_g000010 Rmu_sc0006986.1_g000011 Rmu_sc0007016.1_g000001 Rmu_sc0007221.1_g000006 Rmu_sc0007222.1_g000005 Rmu_sc0007222.1_g000006 Rmu_sc0007251.1_g000001 Rmu_sc0007777.1_g000037 Rmu_sc0007826.1_g000018 Rmu_sc0008053.1_g000015 Rmu_sc0008502.1_g000006 Rmu_sc0008659.1_g000009 Rmu_sc0009045.1_g000009 Rmu_sc0009045.1_g000010 Rmu_sc0009060.1_g000012 Rmu_sc0009360.1_g000024 Rmu_sc0009431.1_g000001 Rmu_sc0009606.1_g000014 Rmu_sc0009774.1_g000001 Rmu_sc0009844.1_g000014 Rmu_sc0010313.1_g000001 Rmu_sc0010454.1_g000008 Rmu_sc0010543.1_g000016 Rmu_sc0010900.1_g000002 Rmu_sc0010925.1_g000009 Rmu_sc0011136.1_g000012 Rmu_sc0011534.1_g000004 Rmu_sc0011809.1_g000007 Rmu_sc0011917.1_g000005 Rmu_sc0012103.1_g000001 Rmu_sc0012287.1_g000001 Rmu_sc0012303.1_g000007 Rmu_sc0012344.1_g000009 Rmu_sc0012674.1_g000007 Rmu_sc0012686.1_g000001 Rmu_sc0012742.1_g000005 Rmu_sc0012746.1_g000026 Rmu_sc0012746.1_g000027 Rmu_sc0013419.1_g000008 Rmu_sc0014866.1_g000004 Rmu_sc0015325.1_g000011 Rmu_sc0015486.1_g000005 Rmu_sc0015651.1_g000002 Rmu_sc0015783.1_g000001 Rmu_sc0016387.1_g000009 Rmu_sc0017518.1_g000005 Rmu_sc0018480.1_g000001 Rmu_sc0018537.1_g000003 Rmu_sc0019200.1_g000002 Rmu_sc0019544.1_g000014 Rmu_sc0019544.1_g000015 Rmu_sc0019873.1_g000001 Rmu_sc0020392.1_g000001 Rmu_sc0020466.1_g000001 Rmu_sc0022008.1_g000001 Rmu_sc0022008.1_g000002 Rmu_sc0022274.1_g000001 Rmu_sc0023644.1_g000005 Rmu_sc0024657.1_g000001 Rmu_sc0024721.1_g000003 Rmu_sc0025790.1_g000001 Rmu_sc0026866.1_g000001 Rmu_sc0027363.1_g000002 Rmu_sc0027485.1_g000001 Rmu_sc0028394.1_g000001 Rmu_sc0033121.1_g000002 Rmu_sc0033838.1_g000001 Rmu_sc0035536.1_g000001 Rmu_sc0036296.1_g000001 Rmu_sc0036297.1_g000001 Rmu_sc0036298.1_g000001 Rmu_sc0036797.1_g000001 Rmu_sc0037010.1_g000001 Rmu_sc0037444.1_g000002 Rmu_sc0039012.1_g000002 Rmu_sc0040172.1_g000001 Rmu_sc0042083.1_g000001 Rmu_ssc0000018.1_g000001 Rmu_ssc0000171.1_g000032 Rmu_ssc0000213.1_g000064 Rmu_ssc0000213.1_g000096 Rmu_ssc0000262.1_g000017 Rmu_ssc0000295.1_g000036 Rmu_ssc0000343.1_g000008 Rmu_ssc0000398.1_g000003 Rmu_ssc0000400.1_g000085 Rmu_ssc0000438.1_g000007 Rmu_ssc0000478.1_g000003
rosa_roxburghii Rroxscaffold_166G00440710 Rroxscaffold_166G00440720 Rroxscaffold_174G00435300 Rroxscaffold_174G00435310 Rroxscaffold_177G00434290 Rroxscaffold_177G00434300 Rroxscaffold_177G00434310 Rroxscaffold_178G00437310 Rroxscaffold_1G00002500 Rroxscaffold_1G00004730 Rroxscaffold_1G00008660 Rroxscaffold_1G00008670 Rroxscaffold_1G00008680 Rroxscaffold_1G00008690 Rroxscaffold_1G00010260 Rroxscaffold_1G00015670 Rroxscaffold_1G00021140 Rroxscaffold_1G00024380 Rroxscaffold_1G00032420 Rroxscaffold_1G00050600 Rroxscaffold_1G00050610 Rroxscaffold_1G00055970 Rroxscaffold_1G00066220 Rroxscaffold_2G00085370 Rroxscaffold_2G00092350 Rroxscaffold_2G00092360 Rroxscaffold_2G00093350 Rroxscaffold_2G00097090 Rroxscaffold_2G00108040 Rroxscaffold_2G00109970 Rroxscaffold_2G00111470 Rroxscaffold_2G00111480 Rroxscaffold_2G00112000 Rroxscaffold_2G00112060 Rroxscaffold_2G00129160 Rroxscaffold_2G00132340 Rroxscaffold_2G00136720 Rroxscaffold_2G00152910 Rroxscaffold_3G00223160 Rroxscaffold_3G00223170 Rroxscaffold_3G00223520 Rroxscaffold_3G00230980 Rroxscaffold_3G00245030 Rroxscaffold_3G00259050 Rroxscaffold_3G00259060 Rroxscaffold_3G00259070 Rroxscaffold_3G00267470 Rroxscaffold_3G00272040 Rroxscaffold_3G00272440 Rroxscaffold_3G00272450 Rroxscaffold_4G00285860 Rroxscaffold_4G00285870 Rroxscaffold_4G00294380 Rroxscaffold_4G00294390 Rroxscaffold_4G00297890 Rroxscaffold_4G00298150 Rroxscaffold_4G00303090 Rroxscaffold_4G00306480 Rroxscaffold_4G00306680 Rroxscaffold_4G00310490 Rroxscaffold_4G00310630 Rroxscaffold_4G00310670 Rroxscaffold_4G00310680 Rroxscaffold_4G00310690 Rroxscaffold_4G00317930 Rroxscaffold_4G00320190 Rroxscaffold_4G00323370 Rroxscaffold_4G00323380 Rroxscaffold_4G00324200 Rroxscaffold_4G00331220 Rroxscaffold_5G00339230 Rroxscaffold_5G00341260 Rroxscaffold_5G00343120 Rroxscaffold_5G00345440 Rroxscaffold_5G00345450 Rroxscaffold_5G00353190 Rroxscaffold_5G00353420 Rroxscaffold_5G00356560 Rroxscaffold_5G00359790 Rroxscaffold_5G00381710 Rroxscaffold_5G00381720 Rroxscaffold_5G00386250 Rroxscaffold_5G00387520 Rroxscaffold_6G00390180 Rroxscaffold_6G00392810 Rroxscaffold_6G00401230 Rroxscaffold_6G00402640 Rroxscaffold_6G00405640 Rroxscaffold_6G00405650 Rroxscaffold_6G00405850 Rroxscaffold_6G00405860 Rroxscaffold_6G00412020 Rroxscaffold_6G00415690 Rroxscaffold_6G00415700 Rroxscaffold_7G00168110 Rroxscaffold_7G00178950 Rroxscaffold_7G00178960 Rroxscaffold_7G00193670 Rroxscaffold_7G00203020 Rroxscaffold_7G00203340 Rroxscaffold_7G00203550 Rroxscaffold_7G00207220 Rroxscaffold_7G00207250 Rroxscaffold_7G00207430 Rroxscaffold_7G00209310 Rroxscaffold_7G00211530 Rroxscaffold_7G00211540 Rroxscaffold_7G00214160 Rroxscaffold_7G00216040 Rroxscaffold_7G00216800
rosa_samantha Rh1AG276800 Rh1CG260400 Rh3CG366700
rosa_wichuraiana Rw1G001440 Rw3G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 372
Acc36I ACCTGC 2 cut(s) 577, 1308
AccB7I CCANNNNNTGG 2 cut(s) 166, 1426
AccI GTMKAC 1 cut(s) 621
AccII CGCG 4 cut(s) 377, 479, 536, 1204
AciI CCGC 5 cut(s) 375, 534, 881, 950, 1268
AclWI GGATC 6 cut(s) 151, 302, 558, 711, 1095, 1253
AcoI YGGCCR 3 cut(s) 882, 1301, 1491
AcsI RAATTY 1 cut(s) 473
AcyI GRCGYC 2 cut(s) 369, 495
AfaI GTAC 2 cut(s) 989, 1384
AfeI AGCGCT 1 cut(s) 615
AfiI CCNNNNNNNGG 4 cut(s) 166, 225, 328, 1426
AflIII ACRYGT 1 cut(s) 1306
AgsI TTSAA 5 cut(s) 41, 628, 862, 871, 960
AjnI CCWGG 2 cut(s) 256, 699
AjuI GAANNNNNNNTTGG 2 cut(s) 458, 490
AloI GAACNNNNNNTCC 2 cut(s) 323, 355
AluBI AGCT 7 cut(s) 195, 281, 582, 767, 1082, 1188, 1274
AluI AGCT 7 cut(s) 195, 281, 582, 767, 1082, 1188, 1274
Alw21I GWGCWC 1 cut(s) 921
Alw26I GTCTC 2 cut(s) 376, 1399
AlwI GGATC 6 cut(s) 151, 302, 558, 711, 1095, 1253
AlwNI CAGNNNCTG 1 cut(s) 1096
Aor51HI AGCGCT 1 cut(s) 615
AoxI GGCC 8 cut(s) 3, 671, 783, 882, 1062, 1218, 1301, 1491
ApeKI GCWGC 7 cut(s) 10, 150, 278, 878, 1045, 1160, 1185
ApoI RAATTY 1 cut(s) 473
AspLEI GCGC 3 cut(s) 616, 1204, 1438
AspS9I GGNCC 6 cut(s) 4, 76, 672, 1218, 1417, 1469
AsuHPI GGTGA 3 cut(s) 454, 780, 822
AvaII GGWCC 3 cut(s) 76, 1417, 1469
BaeI ACNNNNGTAYC 2 cut(s) 633, 666
BalI TGGCCA 1 cut(s) 1303
BarI GAAGNNNNNNTAC 2 cut(s) 21, 53
Bbv12I GWGCWC 1 cut(s) 921
BbvI GCAGC 7 cut(s) 22, 162, 290, 865, 1057, 1147, 1197
BccI CCATC 5 cut(s) 614, 844, 977, 1141, 1483
BceAI ACGGC 1 cut(s) 1090
BciT130I CCWGG 2 cut(s) 258, 701
BcoDI GTCTC 2 cut(s) 376, 1399
BfaI CTAG 5 cut(s) 645, 801, 1230, 1275, 1296
BfmI CTRYAG 5 cut(s) 27, 273, 1240, 1386, 1397
BfoI RGCGCY 1 cut(s) 617
BfuAI ACCTGC 2 cut(s) 577, 1308
BglI GCCNNNNNGGC 1 cut(s) 503
BglII AGATCT 1 cut(s) 1393
BisI GCNGC 9 cut(s) 11, 151, 279, 534, 879, 882, 1046, 1161, 1186
BlpI GCTNAGC 2 cut(s) 768, 1164
BlsI GCNGC 9 cut(s) 12, 152, 280, 535, 880, 883, 1047, 1162, 1187
BmcAI AGTACT 1 cut(s) 1384
Bme1390I CCNGG 2 cut(s) 258, 701
Bme18I GGWCC 3 cut(s) 76, 1417, 1469
BmgT120I GGNCC 6 cut(s) 4, 76, 672, 1218, 1417, 1469
BmiI GGNNCC 4 cut(s) 123, 435, 1219, 1335
BmrFI CCNGG 2 cut(s) 258, 701
BmsI GCATC 3 cut(s) 245, 274, 531
BplI GAGNNNNNCTC 2 cut(s) 1249, 1281
Bpu10I CCTNAGC 1 cut(s) 1128
Bpu1102I GCTNAGC 2 cut(s) 768, 1164
BpuEI CTTGAG 3 cut(s) 104, 395, 431
BsaHI GRCGYC 2 cut(s) 369, 495
BsaI GGTCTC 1 cut(s) 1399
BsaJI CCNNGG 2 cut(s) 257, 699
Bsc4I CCNNNNNNNGG 4 cut(s) 166, 225, 328, 1426
Bse1I ACTGG 3 cut(s) 160, 674, 791
BseBI CCWGG 2 cut(s) 258, 701
BseDI CCNNGG 2 cut(s) 257, 699
BseGI GGATG 4 cut(s) 236, 739, 836, 962
BseLI CCNNNNNNNGG 4 cut(s) 166, 225, 328, 1426
BseMII CTCAG 5 cut(s) 59, 223, 417, 1119, 1365
BseNI ACTGG 3 cut(s) 160, 674, 791
BseRI GAGGAG 2 cut(s) 374, 536
BseX3I CGGCCG 1 cut(s) 882
BseXI GCAGC 7 cut(s) 22, 162, 290, 865, 1057, 1147, 1197
BseYI CCCAGC 1 cut(s) 6
Bsh1236I CGCG 4 cut(s) 377, 479, 536, 1204
Bsh1285I CGRYCG 1 cut(s) 885
BshFI GGCC 8 cut(s) 5, 673, 785, 884, 1064, 1220, 1303, 1493
BsiEI CGRYCG 1 cut(s) 885
BsiHKAI GWGCWC 1 cut(s) 921
BslFI GGGAC 1 cut(s) 259
BslI CCNNNNNNNGG 4 cut(s) 166, 225, 328, 1426
BsmAI GTCTC 2 cut(s) 376, 1399
BsmBI CGTCTC 1 cut(s) 376
BsmFI GGGAC 1 cut(s) 259
BsnI GGCC 8 cut(s) 5, 673, 785, 884, 1064, 1220, 1303, 1493
Bso31I GGTCTC 1 cut(s) 1399
Bsp1286I GDGCHC 1 cut(s) 921
Bsp143I GATC 9 cut(s) 156, 307, 346, 550, 703, 886, 1087, 1245, 1393
Bsp1720I GCTNAGC 2 cut(s) 768, 1164
Bsp68I TCGCGA 1 cut(s) 479
BspACI CCGC 5 cut(s) 375, 534, 881, 950, 1268
BspANI GGCC 8 cut(s) 5, 673, 785, 884, 1064, 1220, 1303, 1493
BspCNI CTCAG 5 cut(s) 60, 222, 416, 1120, 1364
BspFNI CGCG 4 cut(s) 377, 479, 536, 1204
BspLI GGNNCC 4 cut(s) 123, 435, 1219, 1335
BspMAI CTGCAG 2 cut(s) 1244, 1390
BspMI ACCTGC 2 cut(s) 577, 1308
BspPI GGATC 6 cut(s) 151, 302, 558, 711, 1095, 1253
BspQI GCTCTTC 1 cut(s) 674
BspTNI GGTCTC 1 cut(s) 1399
BsrI ACTGG 3 cut(s) 160, 674, 791
BssECI CCNNGG 2 cut(s) 257, 699
BssMI GATC 9 cut(s) 156, 307, 346, 550, 703, 886, 1087, 1245, 1393
BssNI GRCGYC 2 cut(s) 369, 495
Bst2UI CCWGG 2 cut(s) 258, 701
Bst4CI ACNGT 3 cut(s) 274, 1401, 1500
Bst6I CTCTTC 3 cut(s) 327, 351, 674
BstACI GRCGYC 2 cut(s) 369, 495
BstAPI GCANNNNNTGC 1 cut(s) 1160
BstC8I GCNNGC 6 cut(s) 131, 584, 954, 1071, 1200, 1272
BstF5I GGATG 4 cut(s) 236, 739, 836, 962
BstFNI CGCG 4 cut(s) 377, 479, 536, 1204
BstH2I RGCGCY 1 cut(s) 617
BstHHI GCGC 3 cut(s) 616, 1204, 1438
BstKTI GATC 9 cut(s) 159, 310, 349, 553, 706, 889, 1090, 1248, 1396
BstMAI GTCTC 2 cut(s) 376, 1399
BstMBI GATC 9 cut(s) 156, 307, 346, 550, 703, 886, 1087, 1245, 1393
BstMCI CGRYCG 1 cut(s) 885
BstMWI GCNNNNNNNGC 7 cut(s) 139, 262, 503, 592, 1070, 1079, 1160
BstNI CCWGG 2 cut(s) 258, 701
BstNSI RCATGY 1 cut(s) 1310
BstSCI CCNGG 2 cut(s) 256, 699
BstSFI CTRYAG 5 cut(s) 27, 273, 1240, 1386, 1397
BstUI CGCG 4 cut(s) 377, 479, 536, 1204
BstV1I GCAGC 7 cut(s) 22, 162, 290, 865, 1057, 1147, 1197
BstX2I RGATCY 2 cut(s) 703, 1393
BstXI CCANNNNNNTGG 1 cut(s) 1299
BstYI RGATCY 2 cut(s) 703, 1393
BstZI CGGCCG 1 cut(s) 882
BsuRI GGCC 8 cut(s) 5, 673, 785, 884, 1064, 1220, 1303, 1493
BtgZI GCGATG 1 cut(s) 251
BtsCI GGATG 4 cut(s) 236, 739, 836, 962
BtsI GCAGTG 1 cut(s) 1017
BtsIMutI CAGTG 5 cut(s) 270, 798, 1017, 1359, 1406
BtuMI TCGCGA 1 cut(s) 479
BveI ACCTGC 2 cut(s) 577, 1308
Cac8I GCNNGC 6 cut(s) 131, 584, 954, 1071, 1200, 1272
CaiI CAGNNNCTG 1 cut(s) 1096
CfoI GCGC 3 cut(s) 616, 1204, 1438
Cfr13I GGNCC 6 cut(s) 4, 76, 672, 1218, 1417, 1469
CseI GACGC 1 cut(s) 503
Csp6I GTAC 2 cut(s) 988, 1383
CviAII CATG 4 cut(s) 146, 154, 509, 1307
CviQI GTAC 2 cut(s) 988, 1383
DpnI GATC 9 cut(s) 158, 309, 348, 552, 705, 888, 1089, 1247, 1395
DpnII GATC 9 cut(s) 156, 307, 346, 550, 703, 886, 1087, 1245, 1393
EaeI YGGCCR 3 cut(s) 882, 1301, 1491
EagI CGGCCG 1 cut(s) 882
Eam1104I CTCTTC 3 cut(s) 327, 351, 674
EarI CTCTTC 3 cut(s) 327, 351, 674
EciI GGCGGA 2 cut(s) 939, 1257
EclXI CGGCCG 1 cut(s) 882
Eco147I AGGCCT 1 cut(s) 785
Eco31I GGTCTC 1 cut(s) 1399
Eco32I GATATC 1 cut(s) 426
Eco47I GGWCC 3 cut(s) 76, 1417, 1469
Eco47III AGCGCT 1 cut(s) 615
Eco52I CGGCCG 1 cut(s) 882
EcoO109I RGGNCCY 1 cut(s) 1218
EcoRI GAATTC 1 cut(s) 473
EcoRII CCWGG 2 cut(s) 256, 699
EcoRV GATATC 1 cut(s) 426
EcoT22I ATGCAT 1 cut(s) 238
Esp3I CGTCTC 1 cut(s) 376
FaeI CATG 4 cut(s) 149, 157, 512, 1310
FaqI GGGAC 1 cut(s) 259
FatI CATG 4 cut(s) 145, 153, 508, 1306
FauNDI CATATG 1 cut(s) 490
FblI GTMKAC 1 cut(s) 621
Fnu4HI GCNGC 9 cut(s) 11, 151, 279, 534, 879, 882, 1046, 1161, 1186
FokI GGATG 4 cut(s) 223, 746, 823, 949
Fsp4HI GCNGC 9 cut(s) 11, 151, 279, 534, 879, 882, 1046, 1161, 1186
FspBI CTAG 5 cut(s) 645, 801, 1230, 1275, 1296
GlaI GCGC 3 cut(s) 615, 1203, 1437
GluI GCNGC 9 cut(s) 11, 151, 279, 534, 879, 882, 1046, 1161, 1186
GsaI CCCAGC 1 cut(s) 10
HaeII RGCGCY 1 cut(s) 617
HaeIII GGCC 8 cut(s) 5, 673, 785, 884, 1064, 1220, 1303, 1493
HgaI GACGC 1 cut(s) 503
HhaI GCGC 3 cut(s) 616, 1204, 1438
Hin1I GRCGYC 2 cut(s) 369, 495
Hin1II CATG 4 cut(s) 149, 157, 512, 1310
Hin6I GCGC 3 cut(s) 614, 1202, 1436
HinP1I GCGC 3 cut(s) 614, 1202, 1436
HinfI GANTC 4 cut(s) 20, 52, 648, 848
HphI GGTGA 3 cut(s) 454, 780, 822
Hpy166II GTNNAC 3 cut(s) 622, 667, 990
Hpy188I TCNGA 8 cut(s) 57, 212, 1058, 1098, 1140, 1194, 1210, 1313
Hpy8I GTNNAC 3 cut(s) 622, 667, 990
HpyCH4III ACNGT 3 cut(s) 274, 1401, 1500
HpyCH4IV ACGT 1 cut(s) 369
HpyCH4V TGCA 6 cut(s) 236, 586, 1045, 1242, 1388, 1457
HpyF10VI GCNNNNNNNGC 7 cut(s) 139, 262, 503, 592, 1070, 1079, 1160
HpySE526I ACGT 1 cut(s) 369
Hsp92I GRCGYC 2 cut(s) 369, 495
Hsp92II CATG 4 cut(s) 149, 157, 512, 1310
HspAI GCGC 3 cut(s) 614, 1202, 1436
Kzo9I GATC 9 cut(s) 156, 307, 346, 550, 703, 886, 1087, 1245, 1393
LguI GCTCTTC 1 cut(s) 674
Lsp1109I GCAGC 7 cut(s) 22, 162, 290, 865, 1057, 1147, 1197
LweI GCATC 3 cut(s) 245, 274, 531
MaeI CTAG 5 cut(s) 645, 801, 1230, 1275, 1296
MaeII ACGT 1 cut(s) 369
MaeIII GTNAC 3 cut(s) 931, 1107, 1323
MalI GATC 9 cut(s) 158, 309, 348, 552, 705, 888, 1089, 1247, 1395
MboI GATC 9 cut(s) 156, 307, 346, 550, 703, 886, 1087, 1245, 1393
MboII GAAGA 9 cut(s) 29, 344, 368, 409, 550, 691, 769, 772, 1403
MfeI CAATTG 1 cut(s) 1112
MflI RGATCY 2 cut(s) 703, 1393
MhlI GDGCHC 1 cut(s) 921
MlsI TGGCCA 1 cut(s) 1303
MluCI AATT 8 cut(s) 92, 383, 473, 866, 1040, 1112, 1211, 1285
MluNI TGGCCA 1 cut(s) 1303
MlyI GAGTC 1 cut(s) 657
MmeI TCCRAC 1 cut(s) 876
Mox20I TGGCCA 1 cut(s) 1303
Mph1103I ATGCAT 1 cut(s) 238
MscI TGGCCA 1 cut(s) 1303
MseI TTAA 3 cut(s) 419, 1101, 1119
MslI CAYNNNNRTG 1 cut(s) 924
Msp20I TGGCCA 1 cut(s) 1303
MspR9I CCNGG 2 cut(s) 258, 701
MunI CAATTG 1 cut(s) 1112
MvaI CCWGG 2 cut(s) 258, 701
MvnI CGCG 4 cut(s) 377, 479, 536, 1204
MwoI GCNNNNNNNGC 7 cut(s) 139, 262, 503, 592, 1070, 1079, 1160
NdeI CATATG 1 cut(s) 490
NdeII GATC 9 cut(s) 156, 307, 346, 550, 703, 886, 1087, 1245, 1393
NlaIII CATG 4 cut(s) 149, 157, 512, 1310
NlaIV GGNNCC 4 cut(s) 123, 435, 1219, 1335
NmuCI GTSAC 2 cut(s) 931, 1107
NruI TCGCGA 1 cut(s) 479
NsiI ATGCAT 1 cut(s) 238
NspI RCATGY 1 cut(s) 1310
PceI AGGCCT 1 cut(s) 785
PciI ACATGT 1 cut(s) 1306
PciSI GCTCTTC 1 cut(s) 674
PfeI GAWTC 3 cut(s) 20, 52, 848
PflMI CCANNNNNTGG 2 cut(s) 166, 1426
PkrI GCNGC 9 cut(s) 12, 152, 280, 535, 880, 883, 1047, 1162, 1187
PleI GAGTC 1 cut(s) 656
PpsI GAGTC 1 cut(s) 656
PscI ACATGT 1 cut(s) 1306
Psp6I CCWGG 2 cut(s) 256, 699
PspFI CCCAGC 1 cut(s) 6
PspGI CCWGG 2 cut(s) 256, 699
PspN4I GGNNCC 4 cut(s) 123, 435, 1219, 1335
PspPI GGNCC 6 cut(s) 4, 76, 672, 1218, 1417, 1469
PstI CTGCAG 2 cut(s) 1244, 1390
PstNI CAGNNNCTG 1 cut(s) 1096
PsuI RGATCY 2 cut(s) 703, 1393
RruI TCGCGA 1 cut(s) 479
RsaI GTAC 2 cut(s) 989, 1384
RsaNI GTAC 2 cut(s) 988, 1383
RseI CAYNNNNRTG 1 cut(s) 924
SapI GCTCTTC 1 cut(s) 674
SaqAI TTAA 3 cut(s) 419, 1101, 1119
SatI GCNGC 9 cut(s) 11, 151, 279, 534, 879, 882, 1046, 1161, 1186
Sau3AI GATC 9 cut(s) 156, 307, 346, 550, 703, 886, 1087, 1245, 1393
Sau96I GGNCC 6 cut(s) 4, 76, 672, 1218, 1417, 1469
ScaI AGTACT 1 cut(s) 1384
SchI GAGTC 1 cut(s) 657
ScrFI CCNGG 2 cut(s) 258, 701
SduI GDGCHC 1 cut(s) 921
SfaNI GCATC 3 cut(s) 245, 274, 531
SfcI CTRYAG 5 cut(s) 27, 273, 1240, 1386, 1397
SinI GGWCC 3 cut(s) 76, 1417, 1469
SmiMI CAYNNNNRTG 1 cut(s) 924
SmlI CTYRAG 3 cut(s) 83, 410, 446
SmoI CTYRAG 3 cut(s) 83, 410, 446
Sse9I AATT 8 cut(s) 92, 383, 473, 866, 1040, 1112, 1211, 1285
SseBI AGGCCT 1 cut(s) 785
SsiI CCGC 5 cut(s) 375, 534, 881, 950, 1268
SspMI CTAG 5 cut(s) 645, 801, 1230, 1275, 1296
StuI AGGCCT 1 cut(s) 785
StyD4I CCNGG 2 cut(s) 256, 699
TaaI ACNGT 3 cut(s) 274, 1401, 1500
TaiI ACGT 1 cut(s) 372
TasI AATT 8 cut(s) 92, 383, 473, 866, 1040, 1112, 1211, 1285
TatI WGTACW 1 cut(s) 1382
TauI GCSGC 2 cut(s) 536, 884
TfiI GAWTC 3 cut(s) 20, 52, 848
Tru1I TTAA 3 cut(s) 419, 1101, 1119
Tru9I TTAA 3 cut(s) 419, 1101, 1119
TscAI CASTG 5 cut(s) 277, 798, 1017, 1359, 1406
TseFI GTSAC 2 cut(s) 931, 1107
TseI GCWGC 7 cut(s) 10, 150, 278, 878, 1045, 1160, 1185
Tsp45I GTSAC 2 cut(s) 931, 1107
TspDTI ATGAA 3 cut(s) 369, 588, 750
TspRI CASTG 5 cut(s) 277, 798, 1017, 1359, 1406
Van91I CCANNNNNTGG 2 cut(s) 166, 1426
VpaK11BI GGWCC 3 cut(s) 76, 1417, 1469
XapI RAATTY 1 cut(s) 473
XceI RCATGY 1 cut(s) 1310
XcmI CCANNNNNNNNNTGG 1 cut(s) 70
XmiI GTMKAC 1 cut(s) 621
XspI CTAG 5 cut(s) 645, 801, 1230, 1275, 1296
ZraI GACGTC 1 cut(s) 370
ZrmI AGTACT 1 cut(s) 1384
Zsp2I ATGCAT 1 cut(s) 238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.