source UniProtKB
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transpos_assoc | PF13963 | 2 - 35 | 1e-05 | Transposase-associated domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 3 cut(s) | 643, 676, 686 |
| AclWI | GGATC | 3 cut(s) | 54, 65, 231 |
| AcoI | YGGCCR | 4 cut(s) | 317, 476, 530, 540 |
| AcsI | RAATTY | 1 cut(s) | 621 |
| AcyI | GRCGYC | 2 cut(s) | 332, 466 |
| AfaI | GTAC | 1 cut(s) | 290 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 405, 422 |
| AgeI | ACCGGT | 1 cut(s) | 337 |
| AgsI | TTSAA | 2 cut(s) | 589, 596 |
| AjnI | CCWGG | 2 cut(s) | 292, 404 |
| AluBI | AGCT | 2 cut(s) | 431, 592 |
| AluI | AGCT | 2 cut(s) | 431, 592 |
| Alw26I | GTCTC | 1 cut(s) | 563 |
| AlwI | GGATC | 3 cut(s) | 54, 65, 231 |
| AoxI | GGCC | 5 cut(s) | 317, 476, 530, 540, 648 |
| ApeKI | GCWGC | 1 cut(s) | 360 |
| ApoI | RAATTY | 1 cut(s) | 621 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 456, 488 |
| AsiGI | ACCGGT | 1 cut(s) | 337 |
| AspLEI | GCGC | 3 cut(s) | 643, 676, 686 |
| AspS9I | GGNCC | 2 cut(s) | 340, 649 |
| AvaII | GGWCC | 1 cut(s) | 340 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 272, 305 |
| BalI | TGGCCA | 1 cut(s) | 542 |
| BbvI | GCAGC | 1 cut(s) | 372 |
| BccI | CCATC | 1 cut(s) | 136 |
| BceAI | ACGGC | 1 cut(s) | 453 |
| BciT130I | CCWGG | 2 cut(s) | 294, 406 |
| BclI | TGATCA | 1 cut(s) | 133 |
| BcoDI | GTCTC | 1 cut(s) | 563 |
| BisI | GCNGC | 8 cut(s) | 361, 402, 413, 424, 659, 662, 672, 682 |
| BlsI | GCNGC | 8 cut(s) | 362, 403, 414, 425, 660, 663, 673, 683 |
| Bme1390I | CCNGG | 2 cut(s) | 294, 406 |
| Bme18I | GGWCC | 1 cut(s) | 340 |
| BmgT120I | GGNCC | 2 cut(s) | 340, 649 |
| BmiI | GGNNCC | 3 cut(s) | 231, 298, 342 |
| BmrFI | CCNGG | 2 cut(s) | 294, 406 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 638, 670 |
| BpmI | CTGGAG | 1 cut(s) | 397 |
| BsaBI | GATNNNNATC | 1 cut(s) | 132 |
| BsaHI | GRCGYC | 2 cut(s) | 332, 466 |
| BsaJI | CCNNGG | 1 cut(s) | 292 |
| BsaWI | WCCGGW | 3 cut(s) | 327, 337, 689 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 405, 422 |
| Bse118I | RCCGGY | 4 cut(s) | 337, 389, 453, 532 |
| Bse8I | GATNNNNATC | 1 cut(s) | 132 |
| BseBI | CCWGG | 2 cut(s) | 294, 406 |
| BseDI | CCNNGG | 1 cut(s) | 292 |
| BseGI | GGATG | 1 cut(s) | 147 |
| BseJI | GATNNNNATC | 1 cut(s) | 132 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 405, 422 |
| BseMII | CTCAG | 1 cut(s) | 574 |
| BseRI | GAGGAG | 2 cut(s) | 284, 302 |
| BseX3I | CGGCCG | 1 cut(s) | 530 |
| BseXI | GCAGC | 1 cut(s) | 372 |
| BsgI | GTGCAG | 1 cut(s) | 188 |
| Bsh1236I | CGCG | 3 cut(s) | 643, 676, 686 |
| Bsh1285I | CGRYCG | 1 cut(s) | 533 |
| BshFI | GGCC | 5 cut(s) | 319, 478, 532, 542, 650 |
| BshTI | ACCGGT | 1 cut(s) | 337 |
| BsiEI | CGRYCG | 1 cut(s) | 533 |
| BsiSI | CCGG | 9 cut(s) | 316, 328, 338, 390, 446, 454, 529, 533, 690 |
| BslFI | GGGAC | 3 cut(s) | 326, 381, 425 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 405, 422 |
| BsmAI | GTCTC | 1 cut(s) | 563 |
| BsmFI | GGGAC | 3 cut(s) | 326, 381, 425 |
| BsnI | GGCC | 5 cut(s) | 319, 478, 532, 542, 650 |
| Bsp143I | GATC | 4 cut(s) | 46, 70, 133, 223 |
| BspANI | GGCC | 5 cut(s) | 319, 478, 532, 542, 650 |
| BspCNI | CTCAG | 1 cut(s) | 573 |
| BspFNI | CGCG | 3 cut(s) | 643, 676, 686 |
| BspLI | GGNNCC | 3 cut(s) | 231, 298, 342 |
| BspPI | GGATC | 3 cut(s) | 54, 65, 231 |
| BsrFI | RCCGGY | 4 cut(s) | 337, 389, 453, 532 |
| BssAI | RCCGGY | 4 cut(s) | 337, 389, 453, 532 |
| BssECI | CCNNGG | 1 cut(s) | 292 |
| BssMI | GATC | 4 cut(s) | 46, 70, 133, 223 |
| BssNI | GRCGYC | 2 cut(s) | 332, 466 |
| Bst2UI | CCWGG | 2 cut(s) | 294, 406 |
| Bst4CI | ACNGT | 1 cut(s) | 514 |
| BstACI | GRCGYC | 2 cut(s) | 332, 466 |
| BstC8I | GCNNGC | 1 cut(s) | 391 |
| BstDEI | CTNAG | 1 cut(s) | 560 |
| BstF5I | GGATG | 1 cut(s) | 147 |
| BstFNI | CGCG | 3 cut(s) | 643, 676, 686 |
| BstHHI | GCGC | 3 cut(s) | 643, 676, 686 |
| BstKTI | GATC | 4 cut(s) | 49, 73, 136, 226 |
| BstMAI | GTCTC | 1 cut(s) | 563 |
| BstMBI | GATC | 4 cut(s) | 46, 70, 133, 223 |
| BstMCI | CGRYCG | 1 cut(s) | 533 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 647 |
| BstNI | CCWGG | 2 cut(s) | 294, 406 |
| BstSCI | CCNGG | 2 cut(s) | 292, 404 |
| BstUI | CGCG | 3 cut(s) | 643, 676, 686 |
| BstV1I | GCAGC | 1 cut(s) | 372 |
| BstZI | CGGCCG | 1 cut(s) | 530 |
| BsuRI | GGCC | 5 cut(s) | 319, 478, 532, 542, 650 |
| BtsCI | GGATG | 1 cut(s) | 147 |
| BtsIMutI | CAGTG | 1 cut(s) | 510 |
| Cac8I | GCNNGC | 1 cut(s) | 391 |
| CfoI | GCGC | 3 cut(s) | 643, 676, 686 |
| Cfr10I | RCCGGY | 4 cut(s) | 337, 389, 453, 532 |
| Cfr13I | GGNCC | 2 cut(s) | 340, 649 |
| CseI | GACGC | 3 cut(s) | 340, 474, 675 |
| Csp6I | GTAC | 1 cut(s) | 289 |
| CspAI | ACCGGT | 1 cut(s) | 337 |
| CviAII | CATG | 2 cut(s) | 98, 137 |
| CviQI | GTAC | 1 cut(s) | 289 |
| DdeI | CTNAG | 1 cut(s) | 560 |
| DpnI | GATC | 4 cut(s) | 48, 72, 135, 225 |
| DpnII | GATC | 4 cut(s) | 46, 70, 133, 223 |
| EaeI | YGGCCR | 4 cut(s) | 317, 476, 530, 540 |
| EagI | CGGCCG | 1 cut(s) | 530 |
| EciI | GGCGGA | 2 cut(s) | 376, 441 |
| EclXI | CGGCCG | 1 cut(s) | 530 |
| Eco47I | GGWCC | 1 cut(s) | 340 |
| Eco52I | CGGCCG | 1 cut(s) | 530 |
| EcoRII | CCWGG | 2 cut(s) | 292, 404 |
| FaeI | CATG | 2 cut(s) | 101, 140 |
| FaiI | YATR | 7 cut(s) | 81, 99, 138, 151, 179, 203, 567 |
| FaqI | GGGAC | 3 cut(s) | 326, 381, 425 |
| FatI | CATG | 2 cut(s) | 97, 136 |
| FauI | CCCGC | 2 cut(s) | 406, 450 |
| FbaI | TGATCA | 1 cut(s) | 133 |
| Fnu4HI | GCNGC | 8 cut(s) | 361, 402, 413, 424, 659, 662, 672, 682 |
| FokI | GGATG | 1 cut(s) | 154 |
| Fsp4HI | GCNGC | 8 cut(s) | 361, 402, 413, 424, 659, 662, 672, 682 |
| GlaI | GCGC | 3 cut(s) | 642, 675, 685 |
| GluI | GCNGC | 8 cut(s) | 361, 402, 413, 424, 659, 662, 672, 682 |
| GsuI | CTGGAG | 1 cut(s) | 397 |
| HaeIII | GGCC | 5 cut(s) | 319, 478, 532, 542, 650 |
| HapII | CCGG | 9 cut(s) | 316, 328, 338, 390, 446, 454, 529, 533, 690 |
| HgaI | GACGC | 3 cut(s) | 340, 474, 675 |
| HhaI | GCGC | 3 cut(s) | 643, 676, 686 |
| Hin1I | GRCGYC | 2 cut(s) | 332, 466 |
| Hin1II | CATG | 2 cut(s) | 101, 140 |
| Hin6I | GCGC | 3 cut(s) | 641, 674, 684 |
| HinP1I | GCGC | 3 cut(s) | 641, 674, 684 |
| HincII | GTYRAC | 1 cut(s) | 61 |
| HindII | GTYRAC | 1 cut(s) | 61 |
| HindIII | AAGCTT | 1 cut(s) | 590 |
| HinfI | GANTC | 2 cut(s) | 161, 350 |
| HpaI | GTTAAC | 1 cut(s) | 61 |
| HpaII | CCGG | 9 cut(s) | 316, 328, 338, 390, 446, 454, 529, 533, 690 |
| Hpy166II | GTNNAC | 1 cut(s) | 61 |
| Hpy188I | TCNGA | 4 cut(s) | 121, 157, 301, 627 |
| Hpy188III | TCNNGA | 2 cut(s) | 227, 376 |
| Hpy8I | GTNNAC | 1 cut(s) | 61 |
| Hpy99I | CGWCG | 1 cut(s) | 468 |
| HpyCH4III | ACNGT | 1 cut(s) | 514 |
| HpyCH4V | TGCA | 2 cut(s) | 169, 246 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 647 |
| HpyF3I | CTNAG | 1 cut(s) | 560 |
| Hsp92I | GRCGYC | 2 cut(s) | 332, 466 |
| Hsp92II | CATG | 2 cut(s) | 101, 140 |
| HspAI | GCGC | 3 cut(s) | 641, 674, 684 |
| KroI | GCCGGC | 1 cut(s) | 389 |
| KroNI | GCCGGC | 1 cut(s) | 391 |
| Ksp22I | TGATCA | 1 cut(s) | 133 |
| KspAI | GTTAAC | 1 cut(s) | 61 |
| Kzo9I | GATC | 4 cut(s) | 46, 70, 133, 223 |
| LmnI | GCTCC | 2 cut(s) | 378, 428 |
| Lsp1109I | GCAGC | 1 cut(s) | 372 |
| MaeIII | GTNAC | 2 cut(s) | 197, 508 |
| MalI | GATC | 4 cut(s) | 48, 72, 135, 225 |
| MboI | GATC | 4 cut(s) | 46, 70, 133, 223 |
| MboII | GAAGA | 1 cut(s) | 298 |
| MlsI | TGGCCA | 1 cut(s) | 542 |
| MluCI | AATT | 1 cut(s) | 621 |
| MluNI | TGGCCA | 1 cut(s) | 542 |
| MlyI | GAGTC | 1 cut(s) | 344 |
| MnlI | CCTC | 8 cut(s) | 97, 214, 262, 265, 320, 323, 375, 640 |
| Mox20I | TGGCCA | 1 cut(s) | 542 |
| MroNI | GCCGGC | 1 cut(s) | 389 |
| MscI | TGGCCA | 1 cut(s) | 542 |
| MseI | TTAA | 2 cut(s) | 42, 60 |
| Msp20I | TGGCCA | 1 cut(s) | 542 |
| MspA1I | CMGCKG | 3 cut(s) | 259, 286, 437 |
| MspI | CCGG | 9 cut(s) | 316, 328, 338, 390, 446, 454, 529, 533, 690 |
| MspR9I | CCNGG | 2 cut(s) | 294, 406 |
| MvaI | CCWGG | 2 cut(s) | 294, 406 |
| MvnI | CGCG | 3 cut(s) | 643, 676, 686 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 647 |
| NaeI | GCCGGC | 1 cut(s) | 391 |
| NdeII | GATC | 4 cut(s) | 46, 70, 133, 223 |
| NgoMIV | GCCGGC | 1 cut(s) | 389 |
| NlaIII | CATG | 2 cut(s) | 101, 140 |
| NlaIV | GGNNCC | 3 cut(s) | 231, 298, 342 |
| NmuCI | GTSAC | 2 cut(s) | 197, 508 |
| PdiI | GCCGGC | 1 cut(s) | 391 |
| PfeI | GAWTC | 1 cut(s) | 161 |
| PinAI | ACCGGT | 1 cut(s) | 337 |
| PkrI | GCNGC | 8 cut(s) | 362, 403, 414, 425, 660, 663, 673, 683 |
| PleI | GAGTC | 1 cut(s) | 344 |
| PpsI | GAGTC | 1 cut(s) | 344 |
| Psp6I | CCWGG | 2 cut(s) | 292, 404 |
| PspGI | CCWGG | 2 cut(s) | 292, 404 |
| PspN4I | GGNNCC | 3 cut(s) | 231, 298, 342 |
| PspPI | GGNCC | 2 cut(s) | 340, 649 |
| RsaI | GTAC | 1 cut(s) | 290 |
| RsaNI | GTAC | 1 cut(s) | 289 |
| SaqAI | TTAA | 2 cut(s) | 42, 60 |
| SatI | GCNGC | 8 cut(s) | 361, 402, 413, 424, 659, 662, 672, 682 |
| Sau3AI | GATC | 4 cut(s) | 46, 70, 133, 223 |
| Sau96I | GGNCC | 2 cut(s) | 340, 649 |
| SchI | GAGTC | 1 cut(s) | 344 |
| ScrFI | CCNGG | 2 cut(s) | 294, 406 |
| SetI | ASST | 3 cut(s) | 433, 566, 594 |
| SinI | GGWCC | 1 cut(s) | 340 |
| Sse9I | AATT | 1 cut(s) | 621 |
| StyD4I | CCNGG | 2 cut(s) | 292, 404 |
| TaaI | ACNGT | 1 cut(s) | 514 |
| TaqI | TCGA | 3 cut(s) | 348, 463, 553 |
| TasI | AATT | 1 cut(s) | 621 |
| TauI | GCSGC | 7 cut(s) | 404, 415, 426, 661, 664, 674, 684 |
| TfiI | GAWTC | 1 cut(s) | 161 |
| Tru1I | TTAA | 2 cut(s) | 42, 60 |
| Tru9I | TTAA | 2 cut(s) | 42, 60 |
| TscAI | CASTG | 1 cut(s) | 517 |
| TseFI | GTSAC | 2 cut(s) | 197, 508 |
| TseI | GCWGC | 1 cut(s) | 360 |
| Tsp45I | GTSAC | 2 cut(s) | 197, 508 |
| TspDTI | ATGAA | 3 cut(s) | 174, 206, 582 |
| TspGWI | ACGGA | 1 cut(s) | 63 |
| TspRI | CASTG | 1 cut(s) | 517 |
| VpaK11BI | GGWCC | 1 cut(s) | 340 |
| XapI | RAATTY | 1 cut(s) | 621 |