Transposase-associated domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transpos_assoc | PF13963 | 3 - 77 | 1.6e-15 | Transposase-associated domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 502 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 434 |
| AccI | GTMKAC | 1 cut(s) | 310 |
| AciI | CCGC | 1 cut(s) | 380 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 379, 434 |
| AgsI | TTSAA | 6 cut(s) | 98, 125, 164, 206, 341, 404 |
| AjiI | CACGTC | 1 cut(s) | 356 |
| AjnI | CCWGG | 2 cut(s) | 325, 427 |
| AluBI | AGCT | 3 cut(s) | 259, 466, 519 |
| AluI | AGCT | 3 cut(s) | 259, 466, 519 |
| Alw26I | GTCTC | 1 cut(s) | 323 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 272 |
| ApeKI | GCWGC | 3 cut(s) | 259, 272, 463 |
| AsuC2I | CCSGG | 1 cut(s) | 194 |
| AsuHPI | GGTGA | 1 cut(s) | 341 |
| BaeGI | GKGCMC | 1 cut(s) | 194 |
| BbvI | GCAGC | 3 cut(s) | 246, 259, 475 |
| BccI | CCATC | 1 cut(s) | 176 |
| BceAI | ACGGC | 1 cut(s) | 241 |
| BciT130I | CCWGG | 2 cut(s) | 327, 429 |
| BclI | TGATCA | 1 cut(s) | 37 |
| BcnI | CCSGG | 1 cut(s) | 194 |
| BcoDI | GTCTC | 1 cut(s) | 323 |
| BfaI | CTAG | 2 cut(s) | 90, 532 |
| BfmI | CTRYAG | 2 cut(s) | 264, 273 |
| BisI | GCNGC | 3 cut(s) | 260, 273, 464 |
| BlsI | GCNGC | 3 cut(s) | 261, 274, 465 |
| Bme1390I | CCNGG | 3 cut(s) | 194, 327, 429 |
| BmgBI | CACGTC | 1 cut(s) | 356 |
| BmrFI | CCNGG | 3 cut(s) | 194, 327, 429 |
| BmsI | GCATC | 4 cut(s) | 178, 289, 340, 367 |
| BpuEI | CTTGAG | 1 cut(s) | 461 |
| BpuMI | CCSGG | 1 cut(s) | 194 |
| Bsa29I | ATCGAT | 1 cut(s) | 69 |
| BsaI | GGTCTC | 1 cut(s) | 323 |
| BsaJI | CCNNGG | 1 cut(s) | 427 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 379, 434 |
| BseBI | CCWGG | 2 cut(s) | 327, 429 |
| BseCI | ATCGAT | 1 cut(s) | 69 |
| BseDI | CCNNGG | 1 cut(s) | 427 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 379, 434 |
| BseMII | CTCAG | 1 cut(s) | 334 |
| BseSI | GKGCMC | 1 cut(s) | 194 |
| BseXI | GCAGC | 3 cut(s) | 246, 259, 475 |
| BshVI | ATCGAT | 1 cut(s) | 69 |
| BsiSI | CCGG | 1 cut(s) | 194 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 379, 434 |
| BsmAI | GTCTC | 1 cut(s) | 323 |
| BsmI | GAATGC | 1 cut(s) | 131 |
| Bso31I | GGTCTC | 1 cut(s) | 323 |
| Bsp1286I | GDGCHC | 1 cut(s) | 194 |
| Bsp143I | GATC | 2 cut(s) | 25, 37 |
| BspACI | CCGC | 1 cut(s) | 380 |
| BspCNI | CTCAG | 1 cut(s) | 333 |
| BspDI | ATCGAT | 1 cut(s) | 69 |
| BspMAI | CTGCAG | 1 cut(s) | 277 |
| BspQI | GCTCTTC | 1 cut(s) | 159 |
| BspTNI | GGTCTC | 1 cut(s) | 323 |
| BssECI | CCNNGG | 1 cut(s) | 427 |
| BssMI | GATC | 2 cut(s) | 25, 37 |
| BssNAI | GTATAC | 1 cut(s) | 311 |
| Bst1107I | GTATAC | 1 cut(s) | 311 |
| Bst2UI | CCWGG | 2 cut(s) | 327, 429 |
| Bst4CI | ACNGT | 2 cut(s) | 137, 213 |
| Bst6I | CTCTTC | 2 cut(s) | 159, 399 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 126 |
| BstC8I | GCNNGC | 1 cut(s) | 60 |
| BstDEI | CTNAG | 1 cut(s) | 320 |
| BstKTI | GATC | 2 cut(s) | 28, 40 |
| BstMAI | GTCTC | 1 cut(s) | 323 |
| BstMBI | GATC | 2 cut(s) | 25, 37 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 126 |
| BstNI | CCWGG | 2 cut(s) | 327, 429 |
| BstSCI | CCNGG | 3 cut(s) | 192, 325, 427 |
| BstSFI | CTRYAG | 2 cut(s) | 264, 273 |
| BstSLI | GKGCMC | 1 cut(s) | 194 |
| BstV1I | GCAGC | 3 cut(s) | 246, 259, 475 |
| BstZ17I | GTATAC | 1 cut(s) | 311 |
| Bsu15I | ATCGAT | 1 cut(s) | 69 |
| BsuTUI | ATCGAT | 1 cut(s) | 69 |
| BtrI | CACGTC | 1 cut(s) | 356 |
| Cac8I | GCNNGC | 1 cut(s) | 60 |
| CaiI | CAGNNNCTG | 1 cut(s) | 272 |
| ClaI | ATCGAT | 1 cut(s) | 69 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 194, 229 |
| CviAII | CATG | 4 cut(s) | 250, 289, 296, 314 |
| CviJI | RGCY | 6 cut(s) | 50, 259, 272, 466, 482, 519 |
| CviKI_1 | RGCY | 6 cut(s) | 50, 259, 272, 466, 482, 519 |
| DdeI | CTNAG | 1 cut(s) | 320 |
| DpnI | GATC | 2 cut(s) | 27, 39 |
| DpnII | GATC | 2 cut(s) | 25, 37 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 502 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 502 |
| Eam1104I | CTCTTC | 2 cut(s) | 159, 399 |
| EarI | CTCTTC | 2 cut(s) | 159, 399 |
| Eco31I | GGTCTC | 1 cut(s) | 323 |
| EcoRII | CCWGG | 2 cut(s) | 325, 427 |
| FaeI | CATG | 4 cut(s) | 253, 292, 299, 317 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 156, 188 |
| FatI | CATG | 4 cut(s) | 249, 288, 295, 313 |
| FbaI | TGATCA | 1 cut(s) | 37 |
| FblI | GTMKAC | 1 cut(s) | 310 |
| Fnu4HI | GCNGC | 3 cut(s) | 260, 273, 464 |
| Fsp4HI | GCNGC | 3 cut(s) | 260, 273, 464 |
| FspBI | CTAG | 2 cut(s) | 90, 532 |
| GluI | GCNGC | 3 cut(s) | 260, 273, 464 |
| HapII | CCGG | 1 cut(s) | 194 |
| Hin1II | CATG | 4 cut(s) | 253, 292, 299, 317 |
| HpaII | CCGG | 1 cut(s) | 194 |
| HphI | GGTGA | 1 cut(s) | 341 |
| Hpy166II | GTNNAC | 1 cut(s) | 311 |
| Hpy188III | TCNNGA | 2 cut(s) | 23, 341 |
| Hpy8I | GTNNAC | 1 cut(s) | 311 |
| HpyAV | CCTTC | 1 cut(s) | 92 |
| HpyCH4III | ACNGT | 2 cut(s) | 137, 213 |
| HpyCH4IV | ACGT | 1 cut(s) | 355 |
| HpyCH4V | TGCA | 5 cut(s) | 58, 120, 275, 353, 463 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 126 |
| HpyF3I | CTNAG | 1 cut(s) | 320 |
| HpySE526I | ACGT | 1 cut(s) | 355 |
| Hsp92II | CATG | 4 cut(s) | 253, 292, 299, 317 |
| Ksp22I | TGATCA | 1 cut(s) | 37 |
| Kzo9I | GATC | 2 cut(s) | 25, 37 |
| LguI | GCTCTTC | 1 cut(s) | 159 |
| LmnI | GCTCC | 1 cut(s) | 297 |
| LpnPI | CCDG | 9 cut(s) | 36, 207, 252, 312, 339, 387, 414, 441, 498 |
| Lsp1109I | GCAGC | 3 cut(s) | 246, 259, 475 |
| LweI | GCATC | 4 cut(s) | 178, 289, 340, 367 |
| MaeI | CTAG | 2 cut(s) | 90, 532 |
| MaeII | ACGT | 1 cut(s) | 355 |
| MaeIII | GTNAC | 2 cut(s) | 245, 329 |
| MalI | GATC | 2 cut(s) | 27, 39 |
| MboI | GATC | 2 cut(s) | 25, 37 |
| MboII | GAAGA | 5 cut(s) | 176, 194, 356, 359, 416 |
| MhlI | GDGCHC | 1 cut(s) | 194 |
| MluCI | AATT | 3 cut(s) | 419, 487, 522 |
| MmeI | TCCRAC | 1 cut(s) | 473 |
| MnlI | CCTC | 4 cut(s) | 151, 223, 369, 400 |
| MseI | TTAA | 2 cut(s) | 174, 521 |
| MspA1I | CMGCKG | 1 cut(s) | 466 |
| MspI | CCGG | 1 cut(s) | 194 |
| MspR9I | CCNGG | 3 cut(s) | 194, 327, 429 |
| Mva1269I | GAATGC | 1 cut(s) | 131 |
| MvaI | CCWGG | 2 cut(s) | 327, 429 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 126 |
| NciI | CCSGG | 1 cut(s) | 194 |
| NdeII | GATC | 2 cut(s) | 25, 37 |
| NlaIII | CATG | 4 cut(s) | 253, 292, 299, 317 |
| NmuCI | GTSAC | 1 cut(s) | 329 |
| PciSI | GCTCTTC | 1 cut(s) | 159 |
| PctI | GAATGC | 1 cut(s) | 131 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 434 |
| PkrI | GCNGC | 3 cut(s) | 261, 274, 465 |
| Psp6I | CCWGG | 2 cut(s) | 325, 427 |
| PspGI | CCWGG | 2 cut(s) | 325, 427 |
| PstI | CTGCAG | 1 cut(s) | 277 |
| PstNI | CAGNNNCTG | 1 cut(s) | 272 |
| PvuII | CAGCTG | 1 cut(s) | 466 |
| SapI | GCTCTTC | 1 cut(s) | 159 |
| SaqAI | TTAA | 2 cut(s) | 174, 521 |
| SatI | GCNGC | 3 cut(s) | 260, 273, 464 |
| Sau3AI | GATC | 2 cut(s) | 25, 37 |
| ScrFI | CCNGG | 3 cut(s) | 194, 327, 429 |
| SduI | GDGCHC | 1 cut(s) | 194 |
| SetI | ASST | 9 cut(s) | 103, 162, 234, 261, 358, 433, 468, 517, 521 |
| SfaNI | GCATC | 4 cut(s) | 178, 289, 340, 367 |
| SfcI | CTRYAG | 2 cut(s) | 264, 273 |
| SmlI | CTYRAG | 1 cut(s) | 476 |
| SmoI | CTYRAG | 1 cut(s) | 476 |
| Sse9I | AATT | 3 cut(s) | 419, 487, 522 |
| SsiI | CCGC | 1 cut(s) | 380 |
| SspMI | CTAG | 2 cut(s) | 90, 532 |
| StyD4I | CCNGG | 3 cut(s) | 192, 325, 427 |
| TaaI | ACNGT | 2 cut(s) | 137, 213 |
| TaiI | ACGT | 1 cut(s) | 358 |
| TaqI | TCGA | 1 cut(s) | 69 |
| TasI | AATT | 3 cut(s) | 419, 487, 522 |
| Tru1I | TTAA | 2 cut(s) | 174, 521 |
| Tru9I | TTAA | 2 cut(s) | 174, 521 |
| TseFI | GTSAC | 1 cut(s) | 329 |
| TseI | GCWGC | 3 cut(s) | 259, 272, 463 |
| Tsp45I | GTSAC | 1 cut(s) | 329 |
| TspDTI | ATGAA | 1 cut(s) | 445 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 434 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 302 |
| XmiI | GTMKAC | 1 cut(s) | 310 |
| XspI | CTAG | 2 cut(s) | 90, 532 |