source UniProtKB
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transpos_assoc | PF13963 | 3 - 75 | 3.5e-17 | Transposase-associated domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 106, 291 |
| AcsI | RAATTY | 2 cut(s) | 61, 71 |
| AcuI | CTGAAG | 1 cut(s) | 143 |
| AfaI | GTAC | 1 cut(s) | 388 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 201, 563 |
| AgsI | TTSAA | 6 cut(s) | 47, 59, 406, 419, 427, 433 |
| AjiI | CACGTC | 1 cut(s) | 472 |
| Alw26I | GTCTC | 1 cut(s) | 536 |
| ApeKI | GCWGC | 3 cut(s) | 89, 567, 570 |
| ApoI | RAATTY | 2 cut(s) | 61, 71 |
| AspS9I | GGNCC | 1 cut(s) | 166 |
| AsuC2I | CCSGG | 1 cut(s) | 381 |
| AsuHPI | GGTGA | 2 cut(s) | 233, 323 |
| AvaII | GGWCC | 1 cut(s) | 166 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 359, 392 |
| BbvI | GCAGC | 3 cut(s) | 76, 554, 557 |
| BccI | CCATC | 2 cut(s) | 353, 556 |
| BceAI | ACGGC | 1 cut(s) | 199 |
| BciVI | GTATCC | 1 cut(s) | 387 |
| BcnI | CCSGG | 1 cut(s) | 381 |
| BcoDI | GTCTC | 1 cut(s) | 536 |
| BfuI | GTATCC | 1 cut(s) | 387 |
| BglII | AGATCT | 1 cut(s) | 32 |
| BisI | GCNGC | 3 cut(s) | 90, 568, 571 |
| BlsI | GCNGC | 3 cut(s) | 91, 569, 572 |
| Bme1390I | CCNGG | 1 cut(s) | 381 |
| Bme18I | GGWCC | 1 cut(s) | 166 |
| BmgBI | CACGTC | 1 cut(s) | 472 |
| BmgT120I | GGNCC | 1 cut(s) | 166 |
| BmrFI | CCNGG | 1 cut(s) | 381 |
| BmrI | ACTGGG | 1 cut(s) | 60 |
| BmsI | GCATC | 1 cut(s) | 6 |
| BmuI | ACTGGG | 1 cut(s) | 60 |
| BpuEI | CTTGAG | 1 cut(s) | 486 |
| BpuMI | CCSGG | 1 cut(s) | 381 |
| BsaJI | CCNNGG | 1 cut(s) | 139 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 201, 563 |
| Bse1I | ACTGG | 2 cut(s) | 55, 157 |
| BseDI | CCNNGG | 1 cut(s) | 139 |
| BseGI | GGATG | 3 cut(s) | 21, 495, 548 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 201, 563 |
| BseMII | CTCAG | 1 cut(s) | 345 |
| BseNI | ACTGG | 2 cut(s) | 55, 157 |
| BseRI | GAGGAG | 1 cut(s) | 329 |
| BseXI | GCAGC | 3 cut(s) | 76, 554, 557 |
| BsiSI | CCGG | 2 cut(s) | 281, 381 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 201, 563 |
| BsmAI | GTCTC | 1 cut(s) | 536 |
| BsmI | GAATGC | 2 cut(s) | 244, 573 |
| Bsp1407I | TGTACA | 1 cut(s) | 386 |
| Bsp143I | GATC | 1 cut(s) | 32 |
| Bsp19I | CCATGG | 1 cut(s) | 139 |
| BspCNI | CTCAG | 1 cut(s) | 344 |
| BsrGI | TGTACA | 1 cut(s) | 386 |
| BsrI | ACTGG | 2 cut(s) | 55, 157 |
| BssECI | CCNNGG | 1 cut(s) | 139 |
| BssMI | GATC | 1 cut(s) | 32 |
| BssNAI | GTATAC | 1 cut(s) | 107 |
| BssT1I | CCWWGG | 1 cut(s) | 139 |
| Bst1107I | GTATAC | 1 cut(s) | 107 |
| Bst4CI | ACNGT | 3 cut(s) | 268, 296, 423 |
| BstAUI | TGTACA | 1 cut(s) | 386 |
| BstC8I | GCNNGC | 3 cut(s) | 21, 460, 565 |
| BstDEI | CTNAG | 2 cut(s) | 331, 344 |
| BstDSI | CCRYGG | 1 cut(s) | 139 |
| BstF5I | GGATG | 3 cut(s) | 21, 495, 548 |
| BstKTI | GATC | 1 cut(s) | 35 |
| BstMAI | GTCTC | 1 cut(s) | 536 |
| BstMBI | GATC | 1 cut(s) | 32 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 239 |
| BstSCI | CCNGG | 1 cut(s) | 379 |
| BstV1I | GCAGC | 3 cut(s) | 76, 554, 557 |
| BstX2I | RGATCY | 1 cut(s) | 32 |
| BstYI | RGATCY | 1 cut(s) | 32 |
| BstZ17I | GTATAC | 1 cut(s) | 107 |
| BsuI | GTATCC | 1 cut(s) | 387 |
| BtgI | CCRYGG | 1 cut(s) | 139 |
| BtrI | CACGTC | 1 cut(s) | 472 |
| BtsCI | GGATG | 3 cut(s) | 21, 495, 548 |
| BtsIMutI | CAGTG | 2 cut(s) | 150, 301 |
| Cac8I | GCNNGC | 3 cut(s) | 21, 460, 565 |
| Cfr13I | GGNCC | 1 cut(s) | 166 |
| Csp6I | GTAC | 1 cut(s) | 387 |
| CviAII | CATG | 4 cut(s) | 140, 170, 218, 235 |
| CviJI | RGCY | 3 cut(s) | 226, 452, 567 |
| CviKI_1 | RGCY | 3 cut(s) | 226, 452, 567 |
| CviQI | GTAC | 1 cut(s) | 387 |
| DdeI | CTNAG | 2 cut(s) | 331, 344 |
| DpnI | GATC | 1 cut(s) | 34 |
| DpnII | GATC | 1 cut(s) | 32 |
| Eco130I | CCWWGG | 1 cut(s) | 139 |
| Eco47I | GGWCC | 1 cut(s) | 166 |
| Eco57I | CTGAAG | 1 cut(s) | 143 |
| EcoT14I | CCWWGG | 1 cut(s) | 139 |
| ErhI | CCWWGG | 1 cut(s) | 139 |
| FaeI | CATG | 4 cut(s) | 143, 173, 221, 238 |
| FaiI | YATR | 7 cut(s) | 107, 141, 171, 191, 219, 236, 554 |
| FatI | CATG | 4 cut(s) | 139, 169, 217, 234 |
| FblI | GTMKAC | 2 cut(s) | 106, 291 |
| Fnu4HI | GCNGC | 3 cut(s) | 90, 568, 571 |
| FokI | GGATG | 3 cut(s) | 28, 502, 535 |
| Fsp4HI | GCNGC | 3 cut(s) | 90, 568, 571 |
| GluI | GCNGC | 3 cut(s) | 90, 568, 571 |
| HapII | CCGG | 2 cut(s) | 281, 381 |
| Hin1II | CATG | 4 cut(s) | 143, 173, 221, 238 |
| HinfI | GANTC | 2 cut(s) | 329, 524 |
| HpaII | CCGG | 2 cut(s) | 281, 381 |
| HphI | GGTGA | 2 cut(s) | 233, 323 |
| Hpy166II | GTNNAC | 2 cut(s) | 107, 292 |
| Hpy188I | TCNGA | 3 cut(s) | 123, 334, 469 |
| Hpy188III | TCNNGA | 3 cut(s) | 81, 503, 606 |
| Hpy8I | GTNNAC | 2 cut(s) | 107, 292 |
| HpyAV | CCTTC | 2 cut(s) | 237, 266 |
| HpyCH4III | ACNGT | 3 cut(s) | 268, 296, 423 |
| HpyCH4IV | ACGT | 2 cut(s) | 109, 471 |
| HpyCH4V | TGCA | 1 cut(s) | 573 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 239 |
| HpyF3I | CTNAG | 2 cut(s) | 331, 344 |
| HpySE526I | ACGT | 2 cut(s) | 109, 471 |
| Hsp92II | CATG | 4 cut(s) | 143, 173, 221, 238 |
| Kzo9I | GATC | 1 cut(s) | 32 |
| LmnI | GCTCC | 1 cut(s) | 608 |
| LpnPI | CCDG | 8 cut(s) | 36, 138, 187, 256, 293, 294, 394, 549 |
| Lsp1109I | GCAGC | 3 cut(s) | 76, 554, 557 |
| LweI | GCATC | 1 cut(s) | 6 |
| MaeII | ACGT | 2 cut(s) | 109, 471 |
| MaeIII | GTNAC | 3 cut(s) | 131, 179, 248 |
| MalI | GATC | 1 cut(s) | 34 |
| MboI | GATC | 1 cut(s) | 32 |
| MboII | GAAGA | 3 cut(s) | 108, 311, 368 |
| MfeI | CAATTG | 1 cut(s) | 324 |
| MflI | RGATCY | 1 cut(s) | 32 |
| MluCI | AATT | 7 cut(s) | 61, 71, 196, 205, 324, 401, 427 |
| MlyI | GAGTC | 1 cut(s) | 323 |
| MnlI | CCTC | 7 cut(s) | 33, 77, 277, 307, 510, 514, 584 |
| MspI | CCGG | 2 cut(s) | 281, 381 |
| MspR9I | CCNGG | 1 cut(s) | 381 |
| MunI | CAATTG | 1 cut(s) | 324 |
| Mva1269I | GAATGC | 2 cut(s) | 244, 573 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 239 |
| NciI | CCSGG | 1 cut(s) | 381 |
| NcoI | CCATGG | 1 cut(s) | 139 |
| NdeII | GATC | 1 cut(s) | 32 |
| NlaIII | CATG | 4 cut(s) | 143, 173, 221, 238 |
| PctI | GAATGC | 2 cut(s) | 244, 573 |
| PfeI | GAWTC | 1 cut(s) | 524 |
| PflFI | GACNNNGTC | 1 cut(s) | 597 |
| PkrI | GCNGC | 3 cut(s) | 91, 569, 572 |
| PleI | GAGTC | 1 cut(s) | 323 |
| PpsI | GAGTC | 1 cut(s) | 323 |
| PspPI | GGNCC | 1 cut(s) | 166 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 97, 129 |
| PsuI | RGATCY | 1 cut(s) | 32 |
| PsyI | GACNNNGTC | 1 cut(s) | 597 |
| RsaI | GTAC | 1 cut(s) | 388 |
| RsaNI | GTAC | 1 cut(s) | 387 |
| SatI | GCNGC | 3 cut(s) | 90, 568, 571 |
| Sau3AI | GATC | 1 cut(s) | 32 |
| Sau96I | GGNCC | 1 cut(s) | 166 |
| SchI | GAGTC | 1 cut(s) | 323 |
| ScrFI | CCNGG | 1 cut(s) | 381 |
| SetI | ASST | 6 cut(s) | 44, 112, 277, 350, 373, 474 |
| SfaNI | GCATC | 1 cut(s) | 6 |
| SinI | GGWCC | 1 cut(s) | 166 |
| SmlI | CTYRAG | 1 cut(s) | 501 |
| SmoI | CTYRAG | 1 cut(s) | 501 |
| Sse9I | AATT | 7 cut(s) | 61, 71, 196, 205, 324, 401, 427 |
| StyD4I | CCNGG | 1 cut(s) | 379 |
| StyI | CCWWGG | 1 cut(s) | 139 |
| TaaI | ACNGT | 3 cut(s) | 268, 296, 423 |
| TaiI | ACGT | 2 cut(s) | 112, 474 |
| TaqI | TCGA | 2 cut(s) | 577, 589 |
| TasI | AATT | 7 cut(s) | 61, 71, 196, 205, 324, 401, 427 |
| TatI | WGTACW | 1 cut(s) | 386 |
| TfiI | GAWTC | 1 cut(s) | 524 |
| TscAI | CASTG | 2 cut(s) | 157, 301 |
| TseI | GCWGC | 3 cut(s) | 89, 567, 570 |
| TspDTI | ATGAA | 1 cut(s) | 251 |
| TspRI | CASTG | 2 cut(s) | 157, 301 |
| Tth111I | GACNNNGTC | 1 cut(s) | 597 |
| VpaK11BI | GGWCC | 1 cut(s) | 166 |
| XapI | RAATTY | 2 cut(s) | 61, 71 |
| XmiI | GTMKAC | 2 cut(s) | 106, 291 |