Transposase-associated domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transpos_assoc | PF13963 | 3 - 77 | 1.9e-15 | Transposase-associated domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 696 |
| Acc16I | TGCGCA | 1 cut(s) | 528 |
| AccI | GTMKAC | 1 cut(s) | 310 |
| AciI | CCGC | 1 cut(s) | 380 |
| AcsI | RAATTY | 2 cut(s) | 386, 661 |
| AcvI | CACGTG | 1 cut(s) | 509 |
| AcyI | GRCGYC | 1 cut(s) | 693 |
| AfaI | GTAC | 1 cut(s) | 568 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 379, 490 |
| AgsI | TTSAA | 7 cut(s) | 98, 125, 164, 206, 341, 404, 731 |
| AjiI | CACGTC | 1 cut(s) | 356 |
| AjnI | CCWGG | 2 cut(s) | 325, 553 |
| AluBI | AGCT | 3 cut(s) | 259, 431, 653 |
| AluI | AGCT | 3 cut(s) | 259, 431, 653 |
| Alw21I | GWGCWC | 1 cut(s) | 541 |
| Alw26I | GTCTC | 2 cut(s) | 323, 506 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 272 |
| ApeKI | GCWGC | 4 cut(s) | 259, 272, 524, 650 |
| ApoI | RAATTY | 2 cut(s) | 386, 661 |
| AspLEI | GCGC | 1 cut(s) | 529 |
| AsuC2I | CCSGG | 1 cut(s) | 194 |
| AsuHPI | GGTGA | 1 cut(s) | 341 |
| BaeGI | GKGCMC | 2 cut(s) | 194, 424 |
| BauI | CACGAG | 2 cut(s) | 534, 606 |
| BbrPI | CACGTG | 1 cut(s) | 509 |
| BbsI | GAAGAC | 1 cut(s) | 696 |
| Bbv12I | GWGCWC | 1 cut(s) | 541 |
| BbvI | GCAGC | 4 cut(s) | 246, 259, 511, 662 |
| BccI | CCATC | 2 cut(s) | 176, 552 |
| BceAI | ACGGC | 1 cut(s) | 241 |
| BciT130I | CCWGG | 2 cut(s) | 327, 555 |
| BcnI | CCSGG | 1 cut(s) | 194 |
| BcoDI | GTCTC | 2 cut(s) | 323, 506 |
| BfaI | CTAG | 2 cut(s) | 90, 485 |
| BfmI | CTRYAG | 2 cut(s) | 264, 273 |
| BisI | GCNGC | 4 cut(s) | 260, 273, 525, 651 |
| BlsI | GCNGC | 4 cut(s) | 261, 274, 526, 652 |
| Bme1390I | CCNGG | 3 cut(s) | 194, 327, 555 |
| BmgBI | CACGTC | 1 cut(s) | 356 |
| BmrFI | CCNGG | 3 cut(s) | 194, 327, 555 |
| BmsI | GCATC | 4 cut(s) | 178, 289, 340, 367 |
| BpiI | GAAGAC | 1 cut(s) | 696 |
| BpuMI | CCSGG | 1 cut(s) | 194 |
| Bsa29I | ATCGAT | 1 cut(s) | 69 |
| BsaAI | YACGTR | 1 cut(s) | 509 |
| BsaHI | GRCGYC | 1 cut(s) | 693 |
| BsaI | GGTCTC | 1 cut(s) | 323 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 379, 490 |
| Bse1I | ACTGG | 1 cut(s) | 584 |
| BseBI | CCWGG | 2 cut(s) | 327, 555 |
| BseCI | ATCGAT | 1 cut(s) | 69 |
| BseGI | GGATG | 2 cut(s) | 563, 571 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 379, 490 |
| BseMII | CTCAG | 1 cut(s) | 334 |
| BseNI | ACTGG | 1 cut(s) | 584 |
| BseRI | GAGGAG | 2 cut(s) | 422, 645 |
| BseSI | GKGCMC | 2 cut(s) | 194, 424 |
| BseXI | GCAGC | 4 cut(s) | 246, 259, 511, 662 |
| BshVI | ATCGAT | 1 cut(s) | 69 |
| BsiHKAI | GWGCWC | 1 cut(s) | 541 |
| BsiSI | CCGG | 1 cut(s) | 194 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 379, 490 |
| BsmAI | GTCTC | 2 cut(s) | 323, 506 |
| BsmI | GAATGC | 1 cut(s) | 131 |
| Bso31I | GGTCTC | 1 cut(s) | 323 |
| Bsp1286I | GDGCHC | 3 cut(s) | 194, 424, 541 |
| Bsp143I | GATC | 1 cut(s) | 25 |
| BspACI | CCGC | 1 cut(s) | 380 |
| BspCNI | CTCAG | 1 cut(s) | 333 |
| BspDI | ATCGAT | 1 cut(s) | 69 |
| BspMAI | CTGCAG | 1 cut(s) | 277 |
| BspQI | GCTCTTC | 1 cut(s) | 159 |
| BspTNI | GGTCTC | 1 cut(s) | 323 |
| BsrI | ACTGG | 1 cut(s) | 584 |
| BssMI | GATC | 1 cut(s) | 25 |
| BssNAI | GTATAC | 1 cut(s) | 311 |
| BssNI | GRCGYC | 1 cut(s) | 693 |
| BssSI | CACGAG | 2 cut(s) | 534, 606 |
| Bst1107I | GTATAC | 1 cut(s) | 311 |
| Bst2BI | CACGAG | 2 cut(s) | 534, 606 |
| Bst2UI | CCWGG | 2 cut(s) | 327, 555 |
| Bst4CI | ACNGT | 2 cut(s) | 137, 213 |
| Bst6I | CTCTTC | 2 cut(s) | 159, 399 |
| BstACI | GRCGYC | 1 cut(s) | 693 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 126 |
| BstBAI | YACGTR | 1 cut(s) | 509 |
| BstC8I | GCNNGC | 2 cut(s) | 60, 531 |
| BstDEI | CTNAG | 1 cut(s) | 320 |
| BstF5I | GGATG | 2 cut(s) | 563, 571 |
| BstHHI | GCGC | 1 cut(s) | 529 |
| BstKTI | GATC | 1 cut(s) | 28 |
| BstMAI | GTCTC | 2 cut(s) | 323, 506 |
| BstMBI | GATC | 1 cut(s) | 25 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 126, 428, 530 |
| BstNI | CCWGG | 2 cut(s) | 327, 555 |
| BstNSI | RCATGY | 2 cut(s) | 62, 587 |
| BstSCI | CCNGG | 3 cut(s) | 192, 325, 553 |
| BstSFI | CTRYAG | 2 cut(s) | 264, 273 |
| BstSLI | GKGCMC | 2 cut(s) | 194, 424 |
| BstV1I | GCAGC | 4 cut(s) | 246, 259, 511, 662 |
| BstV2I | GAAGAC | 1 cut(s) | 696 |
| BstZ17I | GTATAC | 1 cut(s) | 311 |
| Bsu15I | ATCGAT | 1 cut(s) | 69 |
| BsuTUI | ATCGAT | 1 cut(s) | 69 |
| BtrI | CACGTC | 1 cut(s) | 356 |
| BtsCI | GGATG | 2 cut(s) | 563, 571 |
| Cac8I | GCNNGC | 2 cut(s) | 60, 531 |
| CaiI | CAGNNNCTG | 1 cut(s) | 272 |
| CfoI | GCGC | 1 cut(s) | 529 |
| ClaI | ATCGAT | 1 cut(s) | 69 |
| Csp6I | GTAC | 1 cut(s) | 567 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 194, 229, 594, 629 |
| CviAII | CATG | 7 cut(s) | 59, 250, 296, 314, 476, 584, 716 |
| CviJI | RGCY | 9 cut(s) | 50, 245, 259, 272, 431, 471, 524, 653, 707 |
| CviKI_1 | RGCY | 9 cut(s) | 50, 245, 259, 272, 431, 471, 524, 653, 707 |
| CviQI | GTAC | 1 cut(s) | 567 |
| DdeI | CTNAG | 1 cut(s) | 320 |
| DpnI | GATC | 1 cut(s) | 27 |
| DpnII | GATC | 1 cut(s) | 25 |
| Eam1104I | CTCTTC | 2 cut(s) | 159, 399 |
| EarI | CTCTTC | 2 cut(s) | 159, 399 |
| Eco31I | GGTCTC | 1 cut(s) | 323 |
| Eco72I | CACGTG | 1 cut(s) | 509 |
| EcoRII | CCWGG | 2 cut(s) | 325, 553 |
| EcoT22I | ATGCAT | 1 cut(s) | 717 |
| FaeI | CATG | 7 cut(s) | 62, 253, 299, 317, 479, 587, 719 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 156, 188 |
| FatI | CATG | 7 cut(s) | 58, 249, 295, 313, 475, 583, 715 |
| FauNDI | CATATG | 1 cut(s) | 543 |
| FblI | GTMKAC | 1 cut(s) | 310 |
| Fnu4HI | GCNGC | 4 cut(s) | 260, 273, 525, 651 |
| FokI | GGATG | 2 cut(s) | 558, 570 |
| Fsp4HI | GCNGC | 4 cut(s) | 260, 273, 525, 651 |
| FspBI | CTAG | 2 cut(s) | 90, 485 |
| FspI | TGCGCA | 1 cut(s) | 528 |
| GlaI | GCGC | 1 cut(s) | 528 |
| GluI | GCNGC | 4 cut(s) | 260, 273, 525, 651 |
| HapII | CCGG | 1 cut(s) | 194 |
| HhaI | GCGC | 1 cut(s) | 529 |
| Hin1I | GRCGYC | 1 cut(s) | 693 |
| Hin1II | CATG | 7 cut(s) | 62, 253, 299, 317, 479, 587, 719 |
| Hin6I | GCGC | 1 cut(s) | 527 |
| HinP1I | GCGC | 1 cut(s) | 527 |
| HinfI | GANTC | 1 cut(s) | 230 |
| HpaII | CCGG | 1 cut(s) | 194 |
| HphI | GGTGA | 1 cut(s) | 341 |
| Hpy166II | GTNNAC | 2 cut(s) | 311, 569 |
| Hpy188III | TCNNGA | 4 cut(s) | 23, 341, 449, 575 |
| Hpy8I | GTNNAC | 2 cut(s) | 311, 569 |
| HpyAV | CCTTC | 2 cut(s) | 92, 514 |
| HpyCH4III | ACNGT | 2 cut(s) | 137, 213 |
| HpyCH4IV | ACGT | 3 cut(s) | 355, 508, 693 |
| HpyCH4V | TGCA | 6 cut(s) | 58, 120, 275, 353, 590, 715 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 126, 428, 530 |
| HpyF3I | CTNAG | 1 cut(s) | 320 |
| HpySE526I | ACGT | 3 cut(s) | 355, 508, 693 |
| Hsp92I | GRCGYC | 1 cut(s) | 693 |
| Hsp92II | CATG | 7 cut(s) | 62, 253, 299, 317, 479, 587, 719 |
| HspAI | GCGC | 1 cut(s) | 527 |
| Kzo9I | GATC | 1 cut(s) | 25 |
| LguI | GCTCTTC | 1 cut(s) | 159 |
| LmnI | GCTCC | 2 cut(s) | 297, 658 |
| Lsp1109I | GCAGC | 4 cut(s) | 246, 259, 511, 662 |
| LweI | GCATC | 4 cut(s) | 178, 289, 340, 367 |
| MaeI | CTAG | 2 cut(s) | 90, 485 |
| MaeII | ACGT | 3 cut(s) | 355, 508, 693 |
| MaeIII | GTNAC | 1 cut(s) | 329 |
| MalI | GATC | 1 cut(s) | 27 |
| MboI | GATC | 1 cut(s) | 25 |
| MboII | GAAGA | 6 cut(s) | 176, 194, 356, 359, 416, 701 |
| MhlI | GDGCHC | 3 cut(s) | 194, 424, 541 |
| MluCI | AATT | 3 cut(s) | 386, 460, 661 |
| MlyI | GAGTC | 1 cut(s) | 239 |
| MnlI | CCTC | 5 cut(s) | 151, 369, 400, 445, 666 |
| Mph1103I | ATGCAT | 1 cut(s) | 717 |
| MseI | TTAA | 1 cut(s) | 174 |
| MspI | CCGG | 1 cut(s) | 194 |
| MspR9I | CCNGG | 3 cut(s) | 194, 327, 555 |
| Mva1269I | GAATGC | 1 cut(s) | 131 |
| MvaI | CCWGG | 2 cut(s) | 327, 555 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 126, 428, 530 |
| NciI | CCSGG | 1 cut(s) | 194 |
| NdeI | CATATG | 1 cut(s) | 543 |
| NdeII | GATC | 1 cut(s) | 25 |
| NlaIII | CATG | 7 cut(s) | 62, 253, 299, 317, 479, 587, 719 |
| NmuCI | GTSAC | 1 cut(s) | 329 |
| NsbI | TGCGCA | 1 cut(s) | 528 |
| NsiI | ATGCAT | 1 cut(s) | 717 |
| NspI | RCATGY | 2 cut(s) | 62, 587 |
| PaeI | GCATGC | 1 cut(s) | 62 |
| PciSI | GCTCTTC | 1 cut(s) | 159 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 424 |
| PctI | GAATGC | 1 cut(s) | 131 |
| PfoI | TCCNGGA | 1 cut(s) | 553 |
| PkrI | GCNGC | 4 cut(s) | 261, 274, 526, 652 |
| PleI | GAGTC | 1 cut(s) | 238 |
| PmaCI | CACGTG | 1 cut(s) | 509 |
| PmlI | CACGTG | 1 cut(s) | 509 |
| PpsI | GAGTC | 1 cut(s) | 238 |
| Ppu21I | YACGTR | 1 cut(s) | 509 |
| Psp6I | CCWGG | 2 cut(s) | 325, 553 |
| PspCI | CACGTG | 1 cut(s) | 509 |
| PspGI | CCWGG | 2 cut(s) | 325, 553 |
| PstI | CTGCAG | 1 cut(s) | 277 |
| PstNI | CAGNNNCTG | 1 cut(s) | 272 |
| RsaI | GTAC | 1 cut(s) | 568 |
| RsaNI | GTAC | 1 cut(s) | 567 |
| SapI | GCTCTTC | 1 cut(s) | 159 |
| SaqAI | TTAA | 1 cut(s) | 174 |
| SatI | GCNGC | 4 cut(s) | 260, 273, 525, 651 |
| Sau3AI | GATC | 1 cut(s) | 25 |
| SchI | GAGTC | 1 cut(s) | 239 |
| ScrFI | CCNGG | 3 cut(s) | 194, 327, 555 |
| SduI | GDGCHC | 3 cut(s) | 194, 424, 541 |
| SfaNI | GCATC | 4 cut(s) | 178, 289, 340, 367 |
| SfcI | CTRYAG | 2 cut(s) | 264, 273 |
| SphI | GCATGC | 1 cut(s) | 62 |
| Sse9I | AATT | 3 cut(s) | 386, 460, 661 |
| SsiI | CCGC | 1 cut(s) | 380 |
| SspMI | CTAG | 2 cut(s) | 90, 485 |
| StyD4I | CCNGG | 3 cut(s) | 192, 325, 553 |
| TaaI | ACNGT | 2 cut(s) | 137, 213 |
| TaiI | ACGT | 3 cut(s) | 358, 511, 696 |
| TaqI | TCGA | 2 cut(s) | 69, 427 |
| TasI | AATT | 3 cut(s) | 386, 460, 661 |
| TatI | WGTACW | 1 cut(s) | 566 |
| Tru1I | TTAA | 1 cut(s) | 174 |
| Tru9I | TTAA | 1 cut(s) | 174 |
| TseFI | GTSAC | 1 cut(s) | 329 |
| TseI | GCWGC | 4 cut(s) | 259, 272, 524, 650 |
| Tsp45I | GTSAC | 1 cut(s) | 329 |
| TspDTI | ATGAA | 2 cut(s) | 650, 702 |
| XapI | RAATTY | 2 cut(s) | 386, 661 |
| XceI | RCATGY | 2 cut(s) | 62, 587 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 302 |
| XmiI | GTMKAC | 1 cut(s) | 310 |
| XspI | CTAG | 2 cut(s) | 90, 485 |
| ZraI | GACGTC | 1 cut(s) | 694 |
| Zsp2I | ATGCAT | 1 cut(s) | 717 |