source UniProtKB
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 162 |
| AccII | CGCG | 2 cut(s) | 448, 766 |
| AccIII | TCCGGA | 1 cut(s) | 856 |
| AciI | CCGC | 2 cut(s) | 764, 766 |
| AclWI | GGATC | 1 cut(s) | 161 |
| AcoI | YGGCCR | 2 cut(s) | 757, 761 |
| AcuI | CTGAAG | 3 cut(s) | 63, 78, 270 |
| AfaI | GTAC | 1 cut(s) | 114 |
| AflIII | ACRYGT | 2 cut(s) | 115, 184 |
| AgeI | ACCGGT | 2 cut(s) | 779, 821 |
| AgsI | TTSAA | 2 cut(s) | 413, 548 |
| AhlI | ACTAGT | 1 cut(s) | 356 |
| AjiI | CACGTC | 1 cut(s) | 185 |
| AluBI | AGCT | 7 cut(s) | 62, 208, 248, 427, 441, 518, 619 |
| AluI | AGCT | 7 cut(s) | 62, 208, 248, 427, 441, 518, 619 |
| Alw21I | GWGCWC | 1 cut(s) | 429 |
| Alw26I | GTCTC | 2 cut(s) | 131, 774 |
| AlwI | GGATC | 1 cut(s) | 161 |
| Aor13HI | TCCGGA | 1 cut(s) | 856 |
| AoxI | GGCC | 2 cut(s) | 757, 761 |
| ApeKI | GCWGC | 1 cut(s) | 194 |
| AsiGI | ACCGGT | 2 cut(s) | 779, 821 |
| AsuHPI | GGTGA | 4 cut(s) | 337, 760, 794, 818 |
| BanII | GRGCYC | 1 cut(s) | 429 |
| BbsI | GAAGAC | 1 cut(s) | 555 |
| Bbv12I | GWGCWC | 1 cut(s) | 429 |
| BbvI | GCAGC | 1 cut(s) | 181 |
| BccI | CCATC | 2 cut(s) | 561, 842 |
| BciVI | GTATCC | 1 cut(s) | 619 |
| BclI | TGATCA | 1 cut(s) | 637 |
| BcoDI | GTCTC | 2 cut(s) | 131, 774 |
| BcuI | ACTAGT | 1 cut(s) | 356 |
| BfaI | CTAG | 3 cut(s) | 350, 357, 515 |
| BfuI | GTATCC | 1 cut(s) | 619 |
| BglII | AGATCT | 1 cut(s) | 148 |
| BisI | GCNGC | 2 cut(s) | 195, 764 |
| BlsI | GCNGC | 2 cut(s) | 196, 765 |
| BmgBI | CACGTC | 1 cut(s) | 185 |
| BmsI | GCATC | 1 cut(s) | 331 |
| BpiI | GAAGAC | 1 cut(s) | 555 |
| BpmI | CTGGAG | 1 cut(s) | 129 |
| Bpu10I | CCTNAGC | 3 cut(s) | 204, 209, 620 |
| BpuEI | CTTGAG | 2 cut(s) | 547, 576 |
| BsaBI | GATNNNNATC | 2 cut(s) | 372, 852 |
| BsaI | GGTCTC | 1 cut(s) | 774 |
| BsaJI | CCNNGG | 1 cut(s) | 764 |
| BsaWI | WCCGGW | 4 cut(s) | 779, 786, 821, 856 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 102, 132 |
| Bse118I | RCCGGY | 3 cut(s) | 759, 779, 821 |
| Bse1I | ACTGG | 1 cut(s) | 605 |
| Bse3DI | GCAATG | 2 cut(s) | 344, 659 |
| Bse8I | GATNNNNATC | 2 cut(s) | 372, 852 |
| BseAI | TCCGGA | 1 cut(s) | 856 |
| BseDI | CCNNGG | 1 cut(s) | 764 |
| BseJI | GATNNNNATC | 2 cut(s) | 372, 852 |
| BseMI | GCAATG | 2 cut(s) | 344, 659 |
| BseMII | CTCAG | 1 cut(s) | 684 |
| BseNI | ACTGG | 1 cut(s) | 605 |
| BseX3I | CGGCCG | 1 cut(s) | 761 |
| BseXI | GCAGC | 1 cut(s) | 181 |
| BseYI | CCCAGC | 1 cut(s) | 553 |
| Bsh1236I | CGCG | 2 cut(s) | 448, 766 |
| Bsh1285I | CGRYCG | 2 cut(s) | 764, 780 |
| BshFI | GGCC | 2 cut(s) | 759, 763 |
| BshTI | ACCGGT | 2 cut(s) | 779, 821 |
| BsiEI | CGRYCG | 2 cut(s) | 764, 780 |
| BsiHKAI | GWGCWC | 1 cut(s) | 429 |
| BsiSI | CCGG | 8 cut(s) | 760, 773, 780, 787, 794, 822, 836, 857 |
| BsmAI | GTCTC | 2 cut(s) | 131, 774 |
| BsmBI | CGTCTC | 1 cut(s) | 131 |
| BsnI | GGCC | 2 cut(s) | 759, 763 |
| Bso31I | GGTCTC | 1 cut(s) | 774 |
| Bsp1286I | GDGCHC | 1 cut(s) | 429 |
| Bsp13I | TCCGGA | 1 cut(s) | 856 |
| Bsp143I | GATC | 4 cut(s) | 148, 166, 520, 637 |
| BspACI | CCGC | 2 cut(s) | 764, 766 |
| BspANI | GGCC | 2 cut(s) | 759, 763 |
| BspCNI | CTCAG | 1 cut(s) | 685 |
| BspEI | TCCGGA | 1 cut(s) | 856 |
| BspFNI | CGCG | 2 cut(s) | 448, 766 |
| BspPI | GGATC | 1 cut(s) | 161 |
| BspTNI | GGTCTC | 1 cut(s) | 774 |
| BsrDI | GCAATG | 2 cut(s) | 344, 659 |
| BsrFI | RCCGGY | 3 cut(s) | 759, 779, 821 |
| BsrI | ACTGG | 1 cut(s) | 605 |
| BssAI | RCCGGY | 3 cut(s) | 759, 779, 821 |
| BssECI | CCNNGG | 1 cut(s) | 764 |
| BssMI | GATC | 4 cut(s) | 148, 166, 520, 637 |
| Bst4CI | ACNGT | 2 cut(s) | 320, 740 |
| Bst6I | CTCTTC | 1 cut(s) | 72 |
| BstC8I | GCNNGC | 2 cut(s) | 585, 761 |
| BstDEI | CTNAG | 5 cut(s) | 204, 209, 479, 620, 693 |
| BstDSI | CCRYGG | 1 cut(s) | 764 |
| BstEII | GGTNACC | 3 cut(s) | 325, 782, 824 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 135 |
| BstFNI | CGCG | 2 cut(s) | 448, 766 |
| BstKTI | GATC | 4 cut(s) | 151, 169, 523, 640 |
| BstMAI | GTCTC | 2 cut(s) | 131, 774 |
| BstMBI | GATC | 4 cut(s) | 148, 166, 520, 637 |
| BstMCI | CGRYCG | 2 cut(s) | 764, 780 |
| BstNSI | RCATGY | 2 cut(s) | 119, 659 |
| BstPI | GGTNACC | 3 cut(s) | 325, 782, 824 |
| BstUI | CGCG | 2 cut(s) | 448, 766 |
| BstV1I | GCAGC | 1 cut(s) | 181 |
| BstV2I | GAAGAC | 1 cut(s) | 555 |
| BstX2I | RGATCY | 1 cut(s) | 148 |
| BstYI | RGATCY | 1 cut(s) | 148 |
| BstZI | CGGCCG | 1 cut(s) | 761 |
| BsuI | GTATCC | 1 cut(s) | 619 |
| BsuRI | GGCC | 2 cut(s) | 759, 763 |
| BtgI | CCRYGG | 1 cut(s) | 764 |
| BtrI | CACGTC | 1 cut(s) | 185 |
| BtsIMutI | CAGTG | 1 cut(s) | 325 |
| Cac8I | GCNNGC | 2 cut(s) | 585, 761 |
| Cfr10I | RCCGGY | 3 cut(s) | 759, 779, 821 |
| Cfr42I | CCGCGG | 1 cut(s) | 767 |
| Csp6I | GTAC | 1 cut(s) | 113 |
| CspAI | ACCGGT | 2 cut(s) | 779, 821 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 642, 677 |
| CviAII | CATG | 3 cut(s) | 116, 305, 656 |
| CviQI | GTAC | 1 cut(s) | 113 |
| DdeI | CTNAG | 5 cut(s) | 204, 209, 479, 620, 693 |
| DpnI | GATC | 4 cut(s) | 150, 168, 522, 639 |
| DpnII | GATC | 4 cut(s) | 148, 166, 520, 637 |
| DraI | TTTAAA | 1 cut(s) | 460 |
| EaeI | YGGCCR | 2 cut(s) | 757, 761 |
| EagI | CGGCCG | 1 cut(s) | 761 |
| Eam1104I | CTCTTC | 1 cut(s) | 72 |
| EarI | CTCTTC | 1 cut(s) | 72 |
| Ecl136II | GAGCTC | 1 cut(s) | 427 |
| EclXI | CGGCCG | 1 cut(s) | 761 |
| Eco24I | GRGCYC | 1 cut(s) | 429 |
| Eco31I | GGTCTC | 1 cut(s) | 774 |
| Eco52I | CGGCCG | 1 cut(s) | 761 |
| Eco53kI | GAGCTC | 1 cut(s) | 427 |
| Eco57I | CTGAAG | 3 cut(s) | 63, 78, 270 |
| Eco91I | GGTNACC | 3 cut(s) | 325, 782, 824 |
| EcoICRI | GAGCTC | 1 cut(s) | 427 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 135 |
| EcoO65I | GGTNACC | 3 cut(s) | 325, 782, 824 |
| EcoT22I | ATGCAT | 2 cut(s) | 346, 661 |
| EcoT38I | GRGCYC | 1 cut(s) | 429 |
| Esp3I | CGTCTC | 1 cut(s) | 131 |
| FaeI | CATG | 3 cut(s) | 119, 308, 659 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 210, 242 |
| FatI | CATG | 3 cut(s) | 115, 304, 655 |
| FauNDI | CATATG | 1 cut(s) | 667 |
| FbaI | TGATCA | 1 cut(s) | 637 |
| Fnu4HI | GCNGC | 2 cut(s) | 195, 764 |
| FriOI | GRGCYC | 1 cut(s) | 429 |
| FseI | GGCCGGCC | 1 cut(s) | 763 |
| Fsp4HI | GCNGC | 2 cut(s) | 195, 764 |
| FspBI | CTAG | 3 cut(s) | 350, 357, 515 |
| GluI | GCNGC | 2 cut(s) | 195, 764 |
| GsaI | CCCAGC | 1 cut(s) | 557 |
| GsuI | CTGGAG | 1 cut(s) | 129 |
| HaeIII | GGCC | 2 cut(s) | 759, 763 |
| HapII | CCGG | 8 cut(s) | 760, 773, 780, 787, 794, 822, 836, 857 |
| Hin1II | CATG | 3 cut(s) | 119, 308, 659 |
| HindIII | AAGCTT | 1 cut(s) | 60 |
| HinfI | GANTC | 7 cut(s) | 373, 503, 560, 790, 811, 832, 853 |
| HpaII | CCGG | 8 cut(s) | 760, 773, 780, 787, 794, 822, 836, 857 |
| HphI | GGTGA | 4 cut(s) | 337, 760, 794, 818 |
| Hpy166II | GTNNAC | 2 cut(s) | 182, 598 |
| Hpy188I | TCNGA | 1 cut(s) | 502 |
| Hpy188III | TCNNGA | 4 cut(s) | 108, 413, 564, 857 |
| Hpy8I | GTNNAC | 2 cut(s) | 182, 598 |
| HpyAV | CCTTC | 3 cut(s) | 38, 280, 854 |
| HpyCH4III | ACNGT | 2 cut(s) | 320, 740 |
| HpyCH4IV | ACGT | 1 cut(s) | 184 |
| HpyCH4V | TGCA | 4 cut(s) | 344, 529, 583, 659 |
| HpyF3I | CTNAG | 5 cut(s) | 204, 209, 479, 620, 693 |
| HpySE526I | ACGT | 1 cut(s) | 184 |
| Hsp92II | CATG | 3 cut(s) | 119, 308, 659 |
| Kpn2I | TCCGGA | 1 cut(s) | 856 |
| KroI | GCCGGC | 1 cut(s) | 759 |
| KroNI | GCCGGC | 1 cut(s) | 761 |
| Ksp22I | TGATCA | 1 cut(s) | 637 |
| KspI | CCGCGG | 1 cut(s) | 767 |
| Kzo9I | GATC | 4 cut(s) | 148, 166, 520, 637 |
| LmnI | GCTCC | 1 cut(s) | 424 |
| Lsp1109I | GCAGC | 1 cut(s) | 181 |
| LweI | GCATC | 1 cut(s) | 331 |
| MaeI | CTAG | 3 cut(s) | 350, 357, 515 |
| MaeII | ACGT | 1 cut(s) | 184 |
| MaeIII | GTNAC | 5 cut(s) | 325, 352, 748, 782, 824 |
| MalI | GATC | 4 cut(s) | 150, 168, 522, 639 |
| MboI | GATC | 4 cut(s) | 148, 166, 520, 637 |
| MboII | GAAGA | 3 cut(s) | 89, 560, 623 |
| MfeI | CAATTG | 1 cut(s) | 34 |
| MflI | RGATCY | 1 cut(s) | 148 |
| MhlI | GDGCHC | 1 cut(s) | 429 |
| MluCI | AATT | 3 cut(s) | 34, 408, 486 |
| MlyI | GAGTC | 2 cut(s) | 554, 784 |
| MmeI | TCCRAC | 1 cut(s) | 334 |
| MnlI | CCTC | 6 cut(s) | 67, 73, 170, 600, 694, 738 |
| Mph1103I | ATGCAT | 2 cut(s) | 346, 661 |
| MroI | TCCGGA | 1 cut(s) | 856 |
| MroNI | GCCGGC | 1 cut(s) | 759 |
| MseI | TTAA | 6 cut(s) | 153, 332, 459, 474, 605, 672 |
| MslI | CAYNNNNRTG | 1 cut(s) | 381 |
| MspA1I | CMGCKG | 2 cut(s) | 248, 766 |
| MspI | CCGG | 8 cut(s) | 760, 773, 780, 787, 794, 822, 836, 857 |
| MunI | CAATTG | 1 cut(s) | 34 |
| MvnI | CGCG | 2 cut(s) | 448, 766 |
| NaeI | GCCGGC | 1 cut(s) | 761 |
| NdeI | CATATG | 1 cut(s) | 667 |
| NdeII | GATC | 4 cut(s) | 148, 166, 520, 637 |
| NgoMIV | GCCGGC | 1 cut(s) | 759 |
| NlaIII | CATG | 3 cut(s) | 119, 308, 659 |
| NmuCI | GTSAC | 4 cut(s) | 325, 748, 782, 824 |
| NsiI | ATGCAT | 2 cut(s) | 346, 661 |
| NspI | RCATGY | 2 cut(s) | 119, 659 |
| PciI | ACATGT | 1 cut(s) | 115 |
| PdiI | GCCGGC | 1 cut(s) | 761 |
| PfeI | GAWTC | 5 cut(s) | 373, 503, 811, 832, 853 |
| PflFI | GACNNNGTC | 1 cut(s) | 305 |
| PinAI | ACCGGT | 2 cut(s) | 779, 821 |
| PkrI | GCNGC | 2 cut(s) | 196, 765 |
| PleI | GAGTC | 2 cut(s) | 554, 784 |
| PpsI | GAGTC | 2 cut(s) | 554, 784 |
| PscI | ACATGT | 1 cut(s) | 115 |
| PsiI | TTATAA | 1 cut(s) | 162 |
| Psp124BI | GAGCTC | 1 cut(s) | 429 |
| PspEI | GGTNACC | 3 cut(s) | 325, 782, 824 |
| PspFI | CCCAGC | 1 cut(s) | 553 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 105, 137 |
| PsuI | RGATCY | 1 cut(s) | 148 |
| PsyI | GACNNNGTC | 1 cut(s) | 305 |
| PvuII | CAGCTG | 1 cut(s) | 248 |
| RigI | GGCCGGCC | 1 cut(s) | 763 |
| RsaI | GTAC | 1 cut(s) | 114 |
| RsaNI | GTAC | 1 cut(s) | 113 |
| RseI | CAYNNNNRTG | 1 cut(s) | 381 |
| SacI | GAGCTC | 1 cut(s) | 429 |
| SacII | CCGCGG | 1 cut(s) | 767 |
| SaqAI | TTAA | 6 cut(s) | 153, 332, 459, 474, 605, 672 |
| SatI | GCNGC | 2 cut(s) | 195, 764 |
| Sau3AI | GATC | 4 cut(s) | 148, 166, 520, 637 |
| SchI | GAGTC | 2 cut(s) | 554, 784 |
| SduI | GDGCHC | 1 cut(s) | 429 |
| SfaNI | GCATC | 1 cut(s) | 331 |
| Sfr303I | CCGCGG | 1 cut(s) | 767 |
| SgrBI | CCGCGG | 1 cut(s) | 767 |
| SmiI | ATTTAAAT | 1 cut(s) | 460 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 381 |
| SmlI | CTYRAG | 2 cut(s) | 562, 591 |
| SmoI | CTYRAG | 2 cut(s) | 562, 591 |
| SpeI | ACTAGT | 1 cut(s) | 356 |
| Sse9I | AATT | 3 cut(s) | 34, 408, 486 |
| SsiI | CCGC | 2 cut(s) | 764, 766 |
| SspMI | CTAG | 3 cut(s) | 350, 357, 515 |
| SstI | GAGCTC | 1 cut(s) | 429 |
| SwaI | ATTTAAAT | 1 cut(s) | 460 |
| TaaI | ACNGT | 2 cut(s) | 320, 740 |
| TaiI | ACGT | 1 cut(s) | 187 |
| TaqI | TCGA | 1 cut(s) | 681 |
| TasI | AATT | 3 cut(s) | 34, 408, 486 |
| TatI | WGTACW | 1 cut(s) | 112 |
| TauI | GCSGC | 1 cut(s) | 766 |
| TfiI | GAWTC | 5 cut(s) | 373, 503, 811, 832, 853 |
| Tru1I | TTAA | 6 cut(s) | 153, 332, 459, 474, 605, 672 |
| Tru9I | TTAA | 6 cut(s) | 153, 332, 459, 474, 605, 672 |
| TscAI | CASTG | 1 cut(s) | 325 |
| TseFI | GTSAC | 4 cut(s) | 325, 748, 782, 824 |
| TseI | GCWGC | 1 cut(s) | 194 |
| Tsp45I | GTSAC | 4 cut(s) | 325, 748, 782, 824 |
| TspDTI | ATGAA | 2 cut(s) | 149, 624 |
| TspRI | CASTG | 1 cut(s) | 325 |
| Tth111I | GACNNNGTC | 1 cut(s) | 305 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 135 |
| XceI | RCATGY | 2 cut(s) | 119, 659 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 317 |
| XspI | CTAG | 3 cut(s) | 350, 357, 515 |
| Zsp2I | ATGCAT | 2 cut(s) | 346, 661 |