Transposase family tnp2
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 597, 855, 2195 |
| AarI | CACCTGC | 1 cut(s) | 1588 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 344, 1440 |
| Acc16I | TGCGCA | 1 cut(s) | 1409 |
| Acc36I | ACCTGC | 1 cut(s) | 1588 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 488, 1376, 2315 |
| AccI | GTMKAC | 1 cut(s) | 2026 |
| AccII | CGCG | 2 cut(s) | 1832, 2430 |
| AciI | CCGC | 8 cut(s) | 95, 120, 358, 701, 1053, 1832, 2206, 2430 |
| AclWI | GGATC | 4 cut(s) | 41, 239, 2229, 2242 |
| AcoI | YGGCCR | 3 cut(s) | 3, 575, 2867 |
| AcsI | RAATTY | 8 cut(s) | 272, 721, 2059, 2256, 2960, 3047, 3122, 3142 |
| AcuI | CTGAAG | 3 cut(s) | 737, 1746, 3134 |
| AfaI | GTAC | 9 cut(s) | 415, 510, 559, 769, 844, 1070, 1251, 1748, 2122 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 488, 1073, 1376, 1677, 2315 |
| AflIII | ACRYGT | 3 cut(s) | 168, 1951, 1996 |
| AgeI | ACCGGT | 2 cut(s) | 1645, 2415 |
| AjiI | CACGTC | 1 cut(s) | 1889 |
| AjnI | CCWGG | 6 cut(s) | 313, 655, 670, 1288, 2105, 2223 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3001, 3033 |
| AleI | CACNNNNGTG | 1 cut(s) | 2878 |
| Alw21I | GWGCWC | 3 cut(s) | 322, 1894, 1945 |
| Alw26I | GTCTC | 5 cut(s) | 375, 1754, 3026, 3088, 3371 |
| AlwI | GGATC | 4 cut(s) | 41, 239, 2229, 2242 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1031 |
| AoxI | GGCC | 6 cut(s) | 3, 575, 668, 2103, 2155, 2867 |
| ApeKI | GCWGC | 9 cut(s) | 266, 355, 785, 1560, 1631, 2006, 2072, 2150, 2556 |
| ApoI | RAATTY | 8 cut(s) | 272, 721, 2059, 2256, 2960, 3047, 3122, 3142 |
| AseI | ATTAAT | 1 cut(s) | 3386 |
| AsiGI | ACCGGT | 2 cut(s) | 1645, 2415 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1605, 3000 |
| AspLEI | GCGC | 1 cut(s) | 1410 |
| AspS9I | GGNCC | 6 cut(s) | 459, 659, 668, 1643, 2156, 3021 |
| AsuHPI | GGTGA | 7 cut(s) | 95, 167, 1268, 2126, 2411, 2660, 3391 |
| AsuNHI | GCTAGC | 1 cut(s) | 1354 |
| AvaII | GGWCC | 4 cut(s) | 459, 659, 1643, 3021 |
| BalI | TGGCCA | 1 cut(s) | 2869 |
| BamHI | GGATCC | 1 cut(s) | 2234 |
| BanII | GRGCYC | 1 cut(s) | 1945 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 614, 646 |
| BauI | CACGAG | 1 cut(s) | 1236 |
| BbsI | GAAGAC | 2 cut(s) | 957, 1265 |
| Bbv12I | GWGCWC | 3 cut(s) | 322, 1894, 1945 |
| BbvI | GCAGC | 9 cut(s) | 278, 367, 797, 1572, 1618, 1993, 2059, 2137, 2568 |
| BceAI | ACGGC | 2 cut(s) | 55, 1051 |
| BciT130I | CCWGG | 6 cut(s) | 315, 657, 672, 1290, 2107, 2225 |
| BciVI | GTATCC | 3 cut(s) | 489, 1677, 2943 |
| BcoDI | GTCTC | 5 cut(s) | 375, 1754, 3026, 3088, 3371 |
| BfaI | CTAG | 5 cut(s) | 704, 1355, 1787, 1895, 2619 |
| BfmI | CTRYAG | 1 cut(s) | 1635 |
| BfuAI | ACCTGC | 1 cut(s) | 1588 |
| BfuI | GTATCC | 3 cut(s) | 489, 1677, 2943 |
| BglII | AGATCT | 2 cut(s) | 1869, 2698 |
| BmcAI | AGTACT | 2 cut(s) | 559, 2122 |
| Bme1390I | CCNGG | 6 cut(s) | 315, 657, 672, 1290, 2107, 2225 |
| Bme18I | GGWCC | 4 cut(s) | 459, 659, 1643, 3021 |
| BmgBI | CACGTC | 1 cut(s) | 1889 |
| BmgT120I | GGNCC | 6 cut(s) | 459, 659, 668, 1643, 2156, 3021 |
| BmiI | GGNNCC | 2 cut(s) | 2236, 3132 |
| BmrFI | CCNGG | 6 cut(s) | 315, 657, 672, 1290, 2107, 2225 |
| BmsI | GCATC | 5 cut(s) | 169, 253, 742, 1009, 1993 |
| BmtI | GCTAGC | 1 cut(s) | 1358 |
| BpiI | GAAGAC | 2 cut(s) | 957, 1265 |
| Bpu10I | CCTNAGC | 3 cut(s) | 996, 1062, 2487 |
| BpuEI | CTTGAG | 1 cut(s) | 2687 |
| Bsa29I | ATCGAT | 3 cut(s) | 684, 2940, 3436 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2604 |
| BsaJI | CCNNGG | 7 cut(s) | 6, 68, 313, 608, 2223, 2368, 2902 |
| BsaWI | WCCGGW | 4 cut(s) | 49, 1645, 2231, 2415 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1112, 1142 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 488, 1073, 1376, 1677, 2315 |
| Bse118I | RCCGGY | 3 cut(s) | 577, 1645, 2415 |
| Bse3DI | GCAATG | 1 cut(s) | 1193 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2604 |
| BseBI | CCWGG | 6 cut(s) | 315, 657, 672, 1290, 2107, 2225 |
| BseCI | ATCGAT | 3 cut(s) | 684, 2940, 3436 |
| BseDI | CCNNGG | 7 cut(s) | 6, 68, 313, 608, 2223, 2368, 2902 |
| BseJI | GATNNNNATC | 1 cut(s) | 2604 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 488, 1073, 1376, 1677, 2315 |
| BseMI | GCAATG | 1 cut(s) | 1193 |
| BseMII | CTCAG | 3 cut(s) | 987, 1053, 2058 |
| BseXI | GCAGC | 9 cut(s) | 278, 367, 797, 1572, 1618, 1993, 2059, 2137, 2568 |
| BsgI | GTGCAG | 1 cut(s) | 804 |
| Bsh1236I | CGCG | 2 cut(s) | 1832, 2430 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3410 |
| BshFI | GGCC | 6 cut(s) | 5, 577, 670, 2105, 2157, 2869 |
| BshTI | ACCGGT | 2 cut(s) | 1645, 2415 |
| BshVI | ATCGAT | 3 cut(s) | 684, 2940, 3436 |
| BsiEI | CGRYCG | 1 cut(s) | 3410 |
| BsiHKAI | GWGCWC | 3 cut(s) | 322, 1894, 1945 |
| BsiSI | CCGG | 5 cut(s) | 50, 578, 1646, 2232, 2416 |
| BslFI | GGGAC | 4 cut(s) | 194, 1204, 1446, 2206 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 488, 1073, 1376, 1677, 2315 |
| BsmAI | GTCTC | 5 cut(s) | 375, 1754, 3026, 3088, 3371 |
| BsmFI | GGGAC | 4 cut(s) | 194, 1204, 1446, 2206 |
| BsmI | GAATGC | 3 cut(s) | 189, 400, 2325 |
| BsnI | GGCC | 6 cut(s) | 5, 577, 670, 2105, 2157, 2869 |
| Bsp1286I | GDGCHC | 3 cut(s) | 322, 1894, 1945 |
| Bsp143I | GATC | 7 cut(s) | 46, 244, 1105, 1869, 2234, 2698, 3407 |
| Bsp19I | CCATGG | 2 cut(s) | 68, 2368 |
| BspACI | CCGC | 8 cut(s) | 95, 120, 358, 701, 1053, 1832, 2206, 2430 |
| BspANI | GGCC | 6 cut(s) | 5, 577, 670, 2105, 2157, 2869 |
| BspCNI | CTCAG | 3 cut(s) | 988, 1054, 2057 |
| BspDI | ATCGAT | 3 cut(s) | 684, 2940, 3436 |
| BspFNI | CGCG | 2 cut(s) | 1832, 2430 |
| BspHI | TCATGA | 4 cut(s) | 193, 585, 1444, 2296 |
| BspLI | GGNNCC | 2 cut(s) | 2236, 3132 |
| BspMI | ACCTGC | 1 cut(s) | 1588 |
| BspOI | GCTAGC | 1 cut(s) | 1358 |
| BspPI | GGATC | 4 cut(s) | 41, 239, 2229, 2242 |
| BspQI | GCTCTTC | 1 cut(s) | 705 |
| BsrDI | GCAATG | 1 cut(s) | 1193 |
| BsrFI | RCCGGY | 3 cut(s) | 577, 1645, 2415 |
| BssAI | RCCGGY | 3 cut(s) | 577, 1645, 2415 |
| BssECI | CCNNGG | 7 cut(s) | 6, 68, 313, 608, 2223, 2368, 2902 |
| BssMI | GATC | 7 cut(s) | 46, 244, 1105, 1869, 2234, 2698, 3407 |
| BssSI | CACGAG | 1 cut(s) | 1236 |
| BssT1I | CCWWGG | 4 cut(s) | 68, 608, 2368, 2902 |
| Bst2BI | CACGAG | 1 cut(s) | 1236 |
| Bst2UI | CCWGG | 6 cut(s) | 315, 657, 672, 1290, 2107, 2225 |
| Bst4CI | ACNGT | 8 cut(s) | 592, 1271, 1451, 1522, 2201, 2336, 2931, 3089 |
| Bst6I | CTCTTC | 4 cut(s) | 705, 1752, 2012, 2782 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1129, 2150 |
| BstC8I | GCNNGC | 3 cut(s) | 783, 1356, 2155 |
| BstDSI | CCRYGG | 3 cut(s) | 6, 68, 2368 |
| BstFNI | CGCG | 2 cut(s) | 1832, 2430 |
| BstHHI | GCGC | 1 cut(s) | 1410 |
| BstKTI | GATC | 7 cut(s) | 49, 247, 1108, 1872, 2237, 2701, 3410 |
| BstMAI | GTCTC | 5 cut(s) | 375, 1754, 3026, 3088, 3371 |
| BstMBI | GATC | 7 cut(s) | 46, 244, 1105, 1869, 2234, 2698, 3407 |
| BstMCI | CGRYCG | 1 cut(s) | 3410 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 85, 94, 646, 1129, 1628, 1637, 2150, 2488 |
| BstNI | CCWGG | 6 cut(s) | 315, 657, 672, 1290, 2107, 2225 |
| BstNSI | RCATGY | 3 cut(s) | 172, 1955, 2000 |
| BstSCI | CCNGG | 6 cut(s) | 313, 655, 670, 1288, 2105, 2223 |
| BstSFI | CTRYAG | 1 cut(s) | 1635 |
| BstUI | CGCG | 2 cut(s) | 1832, 2430 |
| BstV1I | GCAGC | 9 cut(s) | 278, 367, 797, 1572, 1618, 1993, 2059, 2137, 2568 |
| BstV2I | GAAGAC | 2 cut(s) | 957, 1265 |
| BstX2I | RGATCY | 4 cut(s) | 244, 1869, 2234, 2698 |
| BstYI | RGATCY | 4 cut(s) | 244, 1869, 2234, 2698 |
| Bsu15I | ATCGAT | 3 cut(s) | 684, 2940, 3436 |
| BsuI | GTATCC | 3 cut(s) | 489, 1677, 2943 |
| BsuRI | GGCC | 6 cut(s) | 5, 577, 670, 2105, 2157, 2869 |
| BsuTUI | ATCGAT | 3 cut(s) | 684, 2940, 3436 |
| BtgI | CCRYGG | 3 cut(s) | 6, 68, 2368 |
| BtrI | CACGTC | 1 cut(s) | 1889 |
| BtsIMutI | CAGTG | 1 cut(s) | 2955 |
| BveI | ACCTGC | 1 cut(s) | 1588 |
| Cac8I | GCNNGC | 3 cut(s) | 783, 1356, 2155 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1031 |
| CciI | TCATGA | 4 cut(s) | 193, 585, 1444, 2296 |
| CfoI | GCGC | 1 cut(s) | 1410 |
| Cfr10I | RCCGGY | 3 cut(s) | 577, 1645, 2415 |
| Cfr13I | GGNCC | 6 cut(s) | 459, 659, 668, 1643, 2156, 3021 |
| ClaI | ATCGAT | 3 cut(s) | 684, 2940, 3436 |
| CseI | GACGC | 1 cut(s) | 2037 |
| Csp6I | GTAC | 9 cut(s) | 414, 509, 558, 768, 843, 1069, 1250, 1747, 2121 |
| CspAI | ACCGGT | 2 cut(s) | 1645, 2415 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 133, 168, 3222, 3257 |
| CviQI | GTAC | 9 cut(s) | 414, 509, 558, 768, 843, 1069, 1250, 1747, 2121 |
| DpnI | GATC | 7 cut(s) | 48, 246, 1107, 1871, 2236, 2700, 3409 |
| DpnII | GATC | 7 cut(s) | 46, 244, 1105, 1869, 2234, 2698, 3407 |
| DraI | TTTAAA | 1 cut(s) | 2965 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 344, 1440 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 344, 1440 |
| EaeI | YGGCCR | 3 cut(s) | 3, 575, 2867 |
| Eam1104I | CTCTTC | 4 cut(s) | 705, 1752, 2012, 2782 |
| EarI | CTCTTC | 4 cut(s) | 705, 1752, 2012, 2782 |
| Ecl136II | GAGCTC | 1 cut(s) | 1943 |
| Eco130I | CCWWGG | 4 cut(s) | 68, 608, 2368, 2902 |
| Eco147I | AGGCCT | 1 cut(s) | 2105 |
| Eco24I | GRGCYC | 1 cut(s) | 1945 |
| Eco32I | GATATC | 5 cut(s) | 682, 1298, 1975, 2137, 2350 |
| Eco47I | GGWCC | 4 cut(s) | 459, 659, 1643, 3021 |
| Eco53kI | GAGCTC | 1 cut(s) | 1943 |
| Eco57I | CTGAAG | 3 cut(s) | 737, 1746, 3134 |
| EcoICRI | GAGCTC | 1 cut(s) | 1943 |
| EcoO109I | RGGNCCY | 1 cut(s) | 668 |
| EcoRI | GAATTC | 1 cut(s) | 3142 |
| EcoRII | CCWGG | 6 cut(s) | 313, 655, 670, 1288, 2105, 2223 |
| EcoRV | GATATC | 5 cut(s) | 682, 1298, 1975, 2137, 2350 |
| EcoT14I | CCWWGG | 4 cut(s) | 68, 608, 2368, 2902 |
| EcoT22I | ATGCAT | 1 cut(s) | 1158 |
| EcoT38I | GRGCYC | 1 cut(s) | 1945 |
| ErhI | CCWWGG | 4 cut(s) | 68, 608, 2368, 2902 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1749, 1781 |
| FaqI | GGGAC | 4 cut(s) | 194, 1204, 1446, 2206 |
| FauI | CCCGC | 1 cut(s) | 2423 |
| FauNDI | CATATG | 1 cut(s) | 748 |
| FblI | GTMKAC | 1 cut(s) | 2026 |
| FriOI | GRGCYC | 1 cut(s) | 1945 |
| FspAI | RTGCGCAY | 1 cut(s) | 1409 |
| FspBI | CTAG | 5 cut(s) | 704, 1355, 1787, 1895, 2619 |
| FspI | TGCGCA | 1 cut(s) | 1409 |
| GlaI | GCGC | 1 cut(s) | 1409 |
| HaeIII | GGCC | 6 cut(s) | 5, 577, 670, 2105, 2157, 2869 |
| HapII | CCGG | 5 cut(s) | 50, 578, 1646, 2232, 2416 |
| HgaI | GACGC | 1 cut(s) | 2037 |
| HhaI | GCGC | 1 cut(s) | 1410 |
| Hin6I | GCGC | 1 cut(s) | 1408 |
| HinP1I | GCGC | 1 cut(s) | 1408 |
| HincII | GTYRAC | 2 cut(s) | 37, 2027 |
| HindII | GTYRAC | 2 cut(s) | 37, 2027 |
| HpaII | CCGG | 5 cut(s) | 50, 578, 1646, 2232, 2416 |
| HphI | GGTGA | 7 cut(s) | 95, 167, 1268, 2126, 2411, 2660, 3391 |
| Hpy166II | GTNNAC | 5 cut(s) | 37, 1338, 1689, 2027, 2927 |
| Hpy188I | TCNGA | 9 cut(s) | 350, 385, 1033, 1257, 1611, 1854, 2047, 2379, 3141 |
| Hpy8I | GTNNAC | 5 cut(s) | 37, 1338, 1689, 2027, 2927 |
| Hpy99I | CGWCG | 3 cut(s) | 939, 1494, 2031 |
| HpyAV | CCTTC | 6 cut(s) | 728, 907, 1721, 2434, 2962, 3159 |
| HpyCH4III | ACNGT | 8 cut(s) | 592, 1271, 1451, 1522, 2201, 2336, 2931, 3089 |
| HpyCH4IV | ACGT | 5 cut(s) | 412, 511, 1135, 1888, 3367 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 85, 94, 646, 1129, 1628, 1637, 2150, 2488 |
| HpySE526I | ACGT | 5 cut(s) | 412, 511, 1135, 1888, 3367 |
| HspAI | GCGC | 1 cut(s) | 1408 |
| Kzo9I | GATC | 7 cut(s) | 46, 244, 1105, 1869, 2234, 2698, 3407 |
| LguI | GCTCTTC | 1 cut(s) | 705 |
| LmnI | GCTCC | 1 cut(s) | 1120 |
| Lsp1109I | GCAGC | 9 cut(s) | 278, 367, 797, 1572, 1618, 1993, 2059, 2137, 2568 |
| LweI | GCATC | 5 cut(s) | 169, 253, 742, 1009, 1993 |
| MaeI | CTAG | 5 cut(s) | 704, 1355, 1787, 1895, 2619 |
| MaeII | ACGT | 5 cut(s) | 412, 511, 1135, 1888, 3367 |
| MaeIII | GTNAC | 8 cut(s) | 90, 171, 1004, 1136, 1171, 1451, 1516, 3397 |
| MalI | GATC | 7 cut(s) | 48, 246, 1107, 1871, 2236, 2700, 3409 |
| MboI | GATC | 7 cut(s) | 46, 244, 1105, 1869, 2234, 2698, 3407 |
| MfeI | CAATTG | 1 cut(s) | 1963 |
| MflI | RGATCY | 4 cut(s) | 244, 1869, 2234, 2698 |
| MhlI | GDGCHC | 3 cut(s) | 322, 1894, 1945 |
| MlsI | TGGCCA | 1 cut(s) | 2869 |
| MluNI | TGGCCA | 1 cut(s) | 2869 |
| MlyI | GAGTC | 4 cut(s) | 395, 508, 2036, 2775 |
| MmeI | TCCRAC | 4 cut(s) | 1640, 2329, 2357, 3071 |
| Mox20I | TGGCCA | 1 cut(s) | 2869 |
| Mph1103I | ATGCAT | 1 cut(s) | 1158 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1605, 3000 |
| MscI | TGGCCA | 1 cut(s) | 2869 |
| MslI | CAYNNNNRTG | 6 cut(s) | 30, 198, 1460, 1950, 2001, 2878 |
| Msp20I | TGGCCA | 1 cut(s) | 2869 |
| MspA1I | CMGCKG | 2 cut(s) | 358, 788 |
| MspI | CCGG | 5 cut(s) | 50, 578, 1646, 2232, 2416 |
| MspR9I | CCNGG | 6 cut(s) | 315, 657, 672, 1290, 2107, 2225 |
| MunI | CAATTG | 1 cut(s) | 1963 |
| Mva1269I | GAATGC | 3 cut(s) | 189, 400, 2325 |
| MvaI | CCWGG | 6 cut(s) | 315, 657, 672, 1290, 2107, 2225 |
| MvnI | CGCG | 2 cut(s) | 1832, 2430 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 85, 94, 646, 1129, 1628, 1637, 2150, 2488 |
| NcoI | CCATGG | 2 cut(s) | 68, 2368 |
| NdeI | CATATG | 1 cut(s) | 748 |
| NdeII | GATC | 7 cut(s) | 46, 244, 1105, 1869, 2234, 2698, 3407 |
| NheI | GCTAGC | 1 cut(s) | 1354 |
| NlaIV | GGNNCC | 2 cut(s) | 2236, 3132 |
| NmeAIII | GCCGAG | 1 cut(s) | 352 |
| NmuCI | GTSAC | 5 cut(s) | 1004, 1136, 1451, 1516, 3397 |
| NsbI | TGCGCA | 1 cut(s) | 1409 |
| NsiI | ATGCAT | 1 cut(s) | 1158 |
| NspI | RCATGY | 3 cut(s) | 172, 1955, 2000 |
| OliI | CACNNNNGTG | 1 cut(s) | 2878 |
| PagI | TCATGA | 4 cut(s) | 193, 585, 1444, 2296 |
| PaqCI | CACCTGC | 1 cut(s) | 1588 |
| PceI | AGGCCT | 1 cut(s) | 2105 |
| PciI | ACATGT | 3 cut(s) | 168, 1951, 1996 |
| PciSI | GCTCTTC | 1 cut(s) | 705 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 508, 970 |
| PctI | GAATGC | 3 cut(s) | 189, 400, 2325 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1605, 3000 |
| PfeI | GAWTC | 7 cut(s) | 446, 887, 1612, 1802, 2454, 3157, 3323 |
| PflFI | GACNNNGTC | 2 cut(s) | 206, 1027 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 488, 1376, 2315 |
| PfoI | TCCNGGA | 1 cut(s) | 655 |
| PinAI | ACCGGT | 2 cut(s) | 1645, 2415 |
| Ple19I | CGATCG | 1 cut(s) | 3410 |
| PleI | GAGTC | 4 cut(s) | 394, 507, 2036, 2774 |
| PpsI | GAGTC | 4 cut(s) | 394, 507, 2036, 2774 |
| PscI | ACATGT | 3 cut(s) | 168, 1951, 1996 |
| PshBI | ATTAAT | 1 cut(s) | 3386 |
| PsiI | TTATAA | 3 cut(s) | 597, 855, 2195 |
| Psp124BI | GAGCTC | 1 cut(s) | 1945 |
| Psp6I | CCWGG | 6 cut(s) | 313, 655, 670, 1288, 2105, 2223 |
| PspGI | CCWGG | 6 cut(s) | 313, 655, 670, 1288, 2105, 2223 |
| PspN4I | GGNNCC | 2 cut(s) | 2236, 3132 |
| PspPI | GGNCC | 6 cut(s) | 459, 659, 668, 1643, 2156, 3021 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1031 |
| PsuI | RGATCY | 4 cut(s) | 244, 1869, 2234, 2698 |
| PsyI | GACNNNGTC | 2 cut(s) | 206, 1027 |
| PvuI | CGATCG | 1 cut(s) | 3410 |
| PvuII | CAGCTG | 1 cut(s) | 788 |
| RsaI | GTAC | 9 cut(s) | 415, 510, 559, 769, 844, 1070, 1251, 1748, 2122 |
| RsaNI | GTAC | 9 cut(s) | 414, 509, 558, 768, 843, 1069, 1250, 1747, 2121 |
| RseI | CAYNNNNRTG | 6 cut(s) | 30, 198, 1460, 1950, 2001, 2878 |
| SacI | GAGCTC | 1 cut(s) | 1945 |
| SalI | GTCGAC | 1 cut(s) | 2025 |
| SapI | GCTCTTC | 1 cut(s) | 705 |
| Sau3AI | GATC | 7 cut(s) | 46, 244, 1105, 1869, 2234, 2698, 3407 |
| Sau96I | GGNCC | 6 cut(s) | 459, 659, 668, 1643, 2156, 3021 |
| ScaI | AGTACT | 2 cut(s) | 559, 2122 |
| SchI | GAGTC | 4 cut(s) | 395, 508, 2036, 2775 |
| ScrFI | CCNGG | 6 cut(s) | 315, 657, 672, 1290, 2107, 2225 |
| SduI | GDGCHC | 3 cut(s) | 322, 1894, 1945 |
| SfaNI | GCATC | 5 cut(s) | 169, 253, 742, 1009, 1993 |
| SfcI | CTRYAG | 1 cut(s) | 1635 |
| SinI | GGWCC | 4 cut(s) | 459, 659, 1643, 3021 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 30, 198, 1460, 1950, 2001, 2878 |
| SmlI | CTYRAG | 1 cut(s) | 2666 |
| SmoI | CTYRAG | 1 cut(s) | 2666 |
| SseBI | AGGCCT | 1 cut(s) | 2105 |
| SsiI | CCGC | 8 cut(s) | 95, 120, 358, 701, 1053, 1832, 2206, 2430 |
| SspI | AATATT | 2 cut(s) | 115, 2710 |
| SspMI | CTAG | 5 cut(s) | 704, 1355, 1787, 1895, 2619 |
| SstI | GAGCTC | 1 cut(s) | 1945 |
| StuI | AGGCCT | 1 cut(s) | 2105 |
| StyD4I | CCNGG | 6 cut(s) | 313, 655, 670, 1288, 2105, 2223 |
| StyI | CCWWGG | 4 cut(s) | 68, 608, 2368, 2902 |
| TaaI | ACNGT | 8 cut(s) | 592, 1271, 1451, 1522, 2201, 2336, 2931, 3089 |
| TaiI | ACGT | 5 cut(s) | 415, 514, 1138, 1891, 3370 |
| TaqII | GACCGA | 1 cut(s) | 1023 |
| TatI | WGTACW | 4 cut(s) | 557, 767, 842, 2120 |
| TauI | GCSGC | 1 cut(s) | 122 |
| TfiI | GAWTC | 7 cut(s) | 446, 887, 1612, 1802, 2454, 3157, 3323 |
| TscAI | CASTG | 1 cut(s) | 2962 |
| TseFI | GTSAC | 5 cut(s) | 1004, 1136, 1451, 1516, 3397 |
| TseI | GCWGC | 9 cut(s) | 266, 355, 785, 1560, 1631, 2006, 2072, 2150, 2556 |
| Tsp45I | GTSAC | 5 cut(s) | 1004, 1136, 1451, 1516, 3397 |
| TspGWI | ACGGA | 3 cut(s) | 422, 2778, 2835 |
| TspRI | CASTG | 1 cut(s) | 2962 |
| Tth111I | GACNNNGTC | 2 cut(s) | 206, 1027 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 488, 1376, 2315 |
| VpaK11BI | GGWCC | 4 cut(s) | 459, 659, 1643, 3021 |
| VspI | ATTAAT | 1 cut(s) | 3386 |
| XapI | RAATTY | 8 cut(s) | 272, 721, 2059, 2256, 2960, 3047, 3122, 3142 |
| XbaI | TCTAGA | 1 cut(s) | 1894 |
| XceI | RCATGY | 3 cut(s) | 172, 1955, 2000 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 962, 2312 |
| XmiI | GTMKAC | 1 cut(s) | 2026 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1605, 3000 |
| XspI | CTAG | 5 cut(s) | 704, 1355, 1787, 1895, 2619 |
| ZrmI | AGTACT | 2 cut(s) | 559, 2122 |
| Zsp2I | ATGCAT | 1 cut(s) | 1158 |