source UniProtKB
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 183, 204 |
| AciI | CCGC | 1 cut(s) | 639 |
| AclI | AACGTT | 1 cut(s) | 968 |
| AcoI | YGGCCR | 1 cut(s) | 899 |
| AcsI | RAATTY | 2 cut(s) | 543, 613 |
| AcyI | GRCGYC | 1 cut(s) | 588 |
| AfaI | GTAC | 4 cut(s) | 319, 420, 636, 648 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 584, 812 |
| AflIII | ACRYGT | 1 cut(s) | 581 |
| AgsI | TTSAA | 5 cut(s) | 73, 126, 276, 281, 692 |
| AjnI | CCWGG | 2 cut(s) | 409, 779 |
| AluBI | AGCT | 3 cut(s) | 44, 467, 491 |
| AluI | AGCT | 3 cut(s) | 44, 467, 491 |
| Alw26I | GTCTC | 1 cut(s) | 595 |
| Ama87I | CYCGRG | 1 cut(s) | 806 |
| AoxI | GGCC | 3 cut(s) | 803, 899, 983 |
| ApeKI | GCWGC | 2 cut(s) | 488, 882 |
| ApoI | RAATTY | 2 cut(s) | 543, 613 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 613 |
| AspA2I | CCTAGG | 1 cut(s) | 671 |
| AspLEI | GCGC | 1 cut(s) | 844 |
| AspS9I | GGNCC | 2 cut(s) | 804, 983 |
| AsuC2I | CCSGG | 2 cut(s) | 764, 982 |
| AsuHPI | GGTGA | 3 cut(s) | 457, 530, 752 |
| AvaI | CYCGRG | 1 cut(s) | 806 |
| AvrII | CCTAGG | 1 cut(s) | 671 |
| AxyI | CCTNAGG | 2 cut(s) | 268, 833 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 638, 671 |
| BalI | TGGCCA | 1 cut(s) | 901 |
| BbsI | GAAGAC | 1 cut(s) | 234 |
| BbvI | GCAGC | 2 cut(s) | 500, 894 |
| BccI | CCATC | 3 cut(s) | 320, 740, 848 |
| BciT130I | CCWGG | 2 cut(s) | 411, 781 |
| BcnI | CCSGG | 2 cut(s) | 764, 982 |
| BcoDI | GTCTC | 1 cut(s) | 595 |
| BfaI | CTAG | 3 cut(s) | 594, 672, 708 |
| BglII | AGATCT | 1 cut(s) | 35 |
| BisI | GCNGC | 2 cut(s) | 489, 883 |
| BlnI | CCTAGG | 1 cut(s) | 671 |
| BlsI | GCNGC | 2 cut(s) | 490, 884 |
| Bme1390I | CCNGG | 4 cut(s) | 411, 764, 781, 982 |
| BmeT110I | CYCGRG | 1 cut(s) | 806 |
| BmgT120I | GGNCC | 2 cut(s) | 804, 983 |
| BmrFI | CCNGG | 4 cut(s) | 411, 764, 781, 982 |
| BmsI | GCATC | 5 cut(s) | 9, 379, 475, 532, 760 |
| BpiI | GAAGAC | 1 cut(s) | 234 |
| Bpu10I | CCTNAGC | 2 cut(s) | 642, 878 |
| BpuMI | CCSGG | 2 cut(s) | 764, 982 |
| BsaHI | GRCGYC | 1 cut(s) | 588 |
| BsaJI | CCNNGG | 4 cut(s) | 409, 618, 671, 932 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 332, 362 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 584, 812 |
| Bse1I | ACTGG | 1 cut(s) | 902 |
| Bse21I | CCTNAGG | 2 cut(s) | 268, 833 |
| Bse3DI | GCAATG | 1 cut(s) | 370 |
| BseBI | CCWGG | 2 cut(s) | 411, 781 |
| BseDI | CCNNGG | 4 cut(s) | 409, 618, 671, 932 |
| BseGI | GGATG | 4 cut(s) | 24, 331, 349, 394 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 584, 812 |
| BseMI | GCAATG | 1 cut(s) | 370 |
| BseMII | CTCAG | 1 cut(s) | 282 |
| BseNI | ACTGG | 1 cut(s) | 902 |
| BseRI | GAGGAG | 1 cut(s) | 353 |
| BseXI | GCAGC | 2 cut(s) | 500, 894 |
| BshFI | GGCC | 3 cut(s) | 805, 901, 985 |
| BsiHKCI | CYCGRG | 1 cut(s) | 806 |
| BsiSI | CCGG | 2 cut(s) | 764, 981 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 584, 812 |
| BsmAI | GTCTC | 1 cut(s) | 595 |
| BsmBI | CGTCTC | 1 cut(s) | 595 |
| BsnI | GGCC | 3 cut(s) | 805, 901, 985 |
| BsoBI | CYCGRG | 1 cut(s) | 806 |
| Bsp1407I | TGTACA | 1 cut(s) | 317 |
| Bsp143I | GATC | 1 cut(s) | 35 |
| BspACI | CCGC | 1 cut(s) | 639 |
| BspANI | GGCC | 3 cut(s) | 805, 901, 985 |
| BspCNI | CTCAG | 1 cut(s) | 281 |
| BsrDI | GCAATG | 1 cut(s) | 370 |
| BsrGI | TGTACA | 1 cut(s) | 317 |
| BsrI | ACTGG | 1 cut(s) | 902 |
| BssECI | CCNNGG | 4 cut(s) | 409, 618, 671, 932 |
| BssMI | GATC | 1 cut(s) | 35 |
| BssNI | GRCGYC | 1 cut(s) | 588 |
| BssT1I | CCWWGG | 3 cut(s) | 618, 671, 932 |
| Bst2UI | CCWGG | 2 cut(s) | 411, 781 |
| Bst4CI | ACNGT | 1 cut(s) | 893 |
| BstACI | GRCGYC | 1 cut(s) | 588 |
| BstAUI | TGTACA | 1 cut(s) | 317 |
| BstC8I | GCNNGC | 3 cut(s) | 24, 726, 840 |
| BstDEI | CTNAG | 4 cut(s) | 268, 642, 833, 878 |
| BstF5I | GGATG | 4 cut(s) | 24, 331, 349, 394 |
| BstHHI | GCGC | 1 cut(s) | 844 |
| BstKTI | GATC | 1 cut(s) | 38 |
| BstMAI | GTCTC | 1 cut(s) | 595 |
| BstMBI | GATC | 1 cut(s) | 35 |
| BstNI | CCWGG | 2 cut(s) | 411, 781 |
| BstNSI | RCATGY | 3 cut(s) | 26, 585, 728 |
| BstSCI | CCNGG | 4 cut(s) | 409, 762, 779, 980 |
| BstV1I | GCAGC | 2 cut(s) | 500, 894 |
| BstV2I | GAAGAC | 1 cut(s) | 234 |
| BstX2I | RGATCY | 1 cut(s) | 35 |
| BstYI | RGATCY | 1 cut(s) | 35 |
| Bsu36I | CCTNAGG | 2 cut(s) | 268, 833 |
| BsuRI | GGCC | 3 cut(s) | 805, 901, 985 |
| BtgZI | GCGATG | 1 cut(s) | 498 |
| BtsCI | GGATG | 4 cut(s) | 24, 331, 349, 394 |
| BtsIMutI | CAGTG | 1 cut(s) | 729 |
| Cac8I | GCNNGC | 3 cut(s) | 24, 726, 840 |
| CfoI | GCGC | 1 cut(s) | 844 |
| Cfr13I | GGNCC | 2 cut(s) | 804, 983 |
| CseI | GACGC | 2 cut(s) | 577, 746 |
| Csp6I | GTAC | 4 cut(s) | 318, 419, 635, 647 |
| CviAII | CATG | 7 cut(s) | 23, 120, 221, 473, 582, 725, 958 |
| CviQI | GTAC | 4 cut(s) | 318, 419, 635, 647 |
| DdeI | CTNAG | 4 cut(s) | 268, 642, 833, 878 |
| DpnI | GATC | 1 cut(s) | 37 |
| DpnII | GATC | 1 cut(s) | 35 |
| DraI | TTTAAA | 1 cut(s) | 462 |
| EaeI | YGGCCR | 1 cut(s) | 899 |
| Eco130I | CCWWGG | 3 cut(s) | 618, 671, 932 |
| Eco81I | CCTNAGG | 2 cut(s) | 268, 833 |
| Eco88I | CYCGRG | 1 cut(s) | 806 |
| EcoRII | CCWGG | 2 cut(s) | 409, 779 |
| EcoT14I | CCWWGG | 3 cut(s) | 618, 671, 932 |
| EcoT22I | ATGCAT | 1 cut(s) | 24 |
| ErhI | CCWWGG | 3 cut(s) | 618, 671, 932 |
| Esp3I | CGTCTC | 1 cut(s) | 595 |
| FaeI | CATG | 7 cut(s) | 26, 123, 224, 476, 585, 728, 961 |
| FatI | CATG | 7 cut(s) | 22, 119, 220, 472, 581, 724, 957 |
| FauI | CCCGC | 1 cut(s) | 646 |
| Fnu4HI | GCNGC | 2 cut(s) | 489, 883 |
| FokI | GGATG | 4 cut(s) | 31, 338, 356, 401 |
| Fsp4HI | GCNGC | 2 cut(s) | 489, 883 |
| FspBI | CTAG | 3 cut(s) | 594, 672, 708 |
| GlaI | GCGC | 1 cut(s) | 843 |
| GluI | GCNGC | 2 cut(s) | 489, 883 |
| HaeIII | GGCC | 3 cut(s) | 805, 901, 985 |
| HapII | CCGG | 2 cut(s) | 764, 981 |
| HgaI | GACGC | 2 cut(s) | 577, 746 |
| HhaI | GCGC | 1 cut(s) | 844 |
| Hin1I | GRCGYC | 1 cut(s) | 588 |
| Hin1II | CATG | 7 cut(s) | 26, 123, 224, 476, 585, 728, 961 |
| Hin6I | GCGC | 1 cut(s) | 842 |
| HinP1I | GCGC | 1 cut(s) | 842 |
| HincII | GTYRAC | 3 cut(s) | 777, 916, 966 |
| HindII | GTYRAC | 3 cut(s) | 777, 916, 966 |
| HinfI | GANTC | 7 cut(s) | 169, 260, 281, 287, 423, 667, 821 |
| HpaI | GTTAAC | 1 cut(s) | 966 |
| HpaII | CCGG | 2 cut(s) | 764, 981 |
| HphI | GGTGA | 3 cut(s) | 457, 530, 752 |
| Hpy166II | GTNNAC | 5 cut(s) | 419, 635, 777, 916, 966 |
| Hpy188I | TCNGA | 5 cut(s) | 286, 334, 358, 499, 853 |
| Hpy188III | TCNNGA | 4 cut(s) | 70, 166, 530, 825 |
| Hpy8I | GTNNAC | 5 cut(s) | 419, 635, 777, 916, 966 |
| HpyAV | CCTTC | 1 cut(s) | 527 |
| HpyCH4III | ACNGT | 1 cut(s) | 893 |
| HpyCH4IV | ACGT | 2 cut(s) | 239, 968 |
| HpyCH4V | TGCA | 5 cut(s) | 22, 26, 363, 392, 488 |
| HpyF3I | CTNAG | 4 cut(s) | 268, 642, 833, 878 |
| HpySE526I | ACGT | 2 cut(s) | 239, 968 |
| Hsp92I | GRCGYC | 1 cut(s) | 588 |
| Hsp92II | CATG | 7 cut(s) | 26, 123, 224, 476, 585, 728, 961 |
| HspAI | GCGC | 1 cut(s) | 842 |
| KspAI | GTTAAC | 1 cut(s) | 966 |
| Kzo9I | GATC | 1 cut(s) | 35 |
| LpnPI | CCDG | 8 cut(s) | 255, 396, 423, 637, 766, 777, 793, 915 |
| Lsp1109I | GCAGC | 2 cut(s) | 500, 894 |
| LweI | GCATC | 5 cut(s) | 9, 379, 475, 532, 760 |
| MaeI | CTAG | 3 cut(s) | 594, 672, 708 |
| MaeII | ACGT | 2 cut(s) | 239, 968 |
| MaeIII | GTNAC | 1 cut(s) | 758 |
| MalI | GATC | 1 cut(s) | 37 |
| MboI | GATC | 1 cut(s) | 35 |
| MboII | GAAGA | 6 cut(s) | 17, 234, 245, 269, 518, 917 |
| MfeI | CAATTG | 2 cut(s) | 276, 571 |
| MflI | RGATCY | 1 cut(s) | 35 |
| MlsI | TGGCCA | 1 cut(s) | 901 |
| MluCI | AATT | 5 cut(s) | 276, 457, 543, 571, 613 |
| MluNI | TGGCCA | 1 cut(s) | 901 |
| MlyI | GAGTC | 2 cut(s) | 163, 830 |
| MnlI | CCTC | 7 cut(s) | 277, 331, 334, 379, 622, 876, 939 |
| Mox20I | TGGCCA | 1 cut(s) | 901 |
| Mph1103I | ATGCAT | 1 cut(s) | 24 |
| MroXI | GAANNNNTTC | 1 cut(s) | 613 |
| MscI | TGGCCA | 1 cut(s) | 901 |
| MseI | TTAA | 6 cut(s) | 372, 461, 678, 752, 861, 965 |
| MslI | CAYNNNNRTG | 1 cut(s) | 358 |
| Msp20I | TGGCCA | 1 cut(s) | 901 |
| MspI | CCGG | 2 cut(s) | 764, 981 |
| MspR9I | CCNGG | 4 cut(s) | 411, 764, 781, 982 |
| MunI | CAATTG | 2 cut(s) | 276, 571 |
| MvaI | CCWGG | 2 cut(s) | 411, 781 |
| NciI | CCSGG | 2 cut(s) | 764, 982 |
| NdeII | GATC | 1 cut(s) | 35 |
| NlaIII | CATG | 7 cut(s) | 26, 123, 224, 476, 585, 728, 961 |
| NmuCI | GTSAC | 1 cut(s) | 758 |
| NsiI | ATGCAT | 1 cut(s) | 24 |
| NspI | RCATGY | 3 cut(s) | 26, 585, 728 |
| PaeI | GCATGC | 2 cut(s) | 26, 728 |
| PciI | ACATGT | 1 cut(s) | 581 |
| PdmI | GAANNNNTTC | 1 cut(s) | 613 |
| PfeI | GAWTC | 5 cut(s) | 260, 281, 287, 423, 667 |
| PkrI | GCNGC | 2 cut(s) | 490, 884 |
| PleI | GAGTC | 2 cut(s) | 163, 829 |
| PpsI | GAGTC | 2 cut(s) | 163, 829 |
| PscI | ACATGT | 1 cut(s) | 581 |
| PsiI | TTATAA | 2 cut(s) | 183, 204 |
| Psp1406I | AACGTT | 1 cut(s) | 968 |
| Psp6I | CCWGG | 2 cut(s) | 409, 779 |
| PspGI | CCWGG | 2 cut(s) | 409, 779 |
| PspPI | GGNCC | 2 cut(s) | 804, 983 |
| PsuI | RGATCY | 1 cut(s) | 35 |
| RsaI | GTAC | 4 cut(s) | 319, 420, 636, 648 |
| RsaNI | GTAC | 4 cut(s) | 318, 419, 635, 647 |
| RseI | CAYNNNNRTG | 1 cut(s) | 358 |
| SaqAI | TTAA | 6 cut(s) | 372, 461, 678, 752, 861, 965 |
| SatI | GCNGC | 2 cut(s) | 489, 883 |
| Sau3AI | GATC | 1 cut(s) | 35 |
| Sau96I | GGNCC | 2 cut(s) | 804, 983 |
| SchI | GAGTC | 2 cut(s) | 163, 830 |
| ScrFI | CCNGG | 4 cut(s) | 411, 764, 781, 982 |
| SfaNI | GCATC | 5 cut(s) | 9, 379, 475, 532, 760 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 358 |
| SphI | GCATGC | 2 cut(s) | 26, 728 |
| Sse9I | AATT | 5 cut(s) | 276, 457, 543, 571, 613 |
| SsiI | CCGC | 1 cut(s) | 639 |
| SspMI | CTAG | 3 cut(s) | 594, 672, 708 |
| StyD4I | CCNGG | 4 cut(s) | 409, 762, 779, 980 |
| StyI | CCWWGG | 3 cut(s) | 618, 671, 932 |
| TaaI | ACNGT | 1 cut(s) | 893 |
| TaiI | ACGT | 2 cut(s) | 242, 971 |
| TasI | AATT | 5 cut(s) | 276, 457, 543, 571, 613 |
| TatI | WGTACW | 1 cut(s) | 317 |
| TfiI | GAWTC | 5 cut(s) | 260, 281, 287, 423, 667 |
| Tru1I | TTAA | 6 cut(s) | 372, 461, 678, 752, 861, 965 |
| Tru9I | TTAA | 6 cut(s) | 372, 461, 678, 752, 861, 965 |
| TscAI | CASTG | 1 cut(s) | 736 |
| TseFI | GTSAC | 1 cut(s) | 758 |
| TseI | GCWGC | 2 cut(s) | 488, 882 |
| Tsp45I | GTSAC | 1 cut(s) | 758 |
| TspDTI | ATGAA | 4 cut(s) | 210, 342, 555, 959 |
| TspRI | CASTG | 1 cut(s) | 736 |
| XapI | RAATTY | 2 cut(s) | 543, 613 |
| XceI | RCATGY | 3 cut(s) | 26, 585, 728 |
| XmaJI | CCTAGG | 1 cut(s) | 671 |
| XmnI | GAANNNNTTC | 1 cut(s) | 613 |
| XspI | CTAG | 3 cut(s) | 594, 672, 708 |
| Zsp2I | ATGCAT | 1 cut(s) | 24 |