Transposase-associated domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transpos_assoc | PF13963 | 4 - 62 | 1.6e-10 | Transposase-associated domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1228 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 457 |
| Acc16I | TGCGCA | 1 cut(s) | 309 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 389 |
| AccIII | TCCGGA | 1 cut(s) | 568 |
| AciI | CCGC | 3 cut(s) | 314, 699, 1043 |
| AclWI | GGATC | 2 cut(s) | 860, 873 |
| AcsI | RAATTY | 2 cut(s) | 341, 964 |
| AcuI | CTGAAG | 1 cut(s) | 1121 |
| AfaI | GTAC | 1 cut(s) | 380 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 221, 389, 1073 |
| AflIII | ACRYGT | 1 cut(s) | 480 |
| AgsI | TTSAA | 8 cut(s) | 119, 296, 359, 478, 1001, 1072, 1105, 1196 |
| AjnI | CCWGG | 1 cut(s) | 382 |
| AluBI | AGCT | 6 cut(s) | 242, 437, 643, 956, 1130, 1213 |
| AluI | AGCT | 6 cut(s) | 242, 437, 643, 956, 1130, 1213 |
| Alw21I | GWGCWC | 1 cut(s) | 617 |
| Alw26I | GTCTC | 2 cut(s) | 559, 739 |
| AlwI | GGATC | 2 cut(s) | 860, 873 |
| Ama87I | CYCGRG | 1 cut(s) | 741 |
| Aor13HI | TCCGGA | 1 cut(s) | 568 |
| ApeKI | GCWGC | 6 cut(s) | 5, 227, 761, 874, 953, 1130 |
| ApoI | RAATTY | 2 cut(s) | 341, 964 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 996 |
| AspLEI | GCGC | 2 cut(s) | 310, 825 |
| AspS9I | GGNCC | 1 cut(s) | 272 |
| AsuC2I | CCSGG | 1 cut(s) | 512 |
| AsuHPI | GGTGA | 3 cut(s) | 96, 806, 1105 |
| AvaI | CYCGRG | 1 cut(s) | 741 |
| AvaII | GGWCC | 1 cut(s) | 272 |
| BaeGI | GKGCMC | 2 cut(s) | 149, 636 |
| BamHI | GGATCC | 1 cut(s) | 865 |
| BauI | CACGAG | 1 cut(s) | 909 |
| Bbv12I | GWGCWC | 1 cut(s) | 617 |
| BbvCI | CCTCAGC | 1 cut(s) | 1214 |
| BbvI | GCAGC | 5 cut(s) | 214, 748, 886, 965, 1117 |
| BccI | CCATC | 3 cut(s) | 131, 851, 938 |
| BciT130I | CCWGG | 1 cut(s) | 384 |
| BcnI | CCSGG | 1 cut(s) | 512 |
| BcoDI | GTCTC | 2 cut(s) | 559, 739 |
| BfaI | CTAG | 2 cut(s) | 45, 276 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 883 |
| BglII | AGATCT | 1 cut(s) | 1018 |
| BisI | GCNGC | 6 cut(s) | 6, 228, 762, 875, 954, 1131 |
| BlsI | GCNGC | 6 cut(s) | 7, 229, 763, 876, 955, 1132 |
| Bme1390I | CCNGG | 2 cut(s) | 384, 512 |
| Bme18I | GGWCC | 1 cut(s) | 272 |
| BmeT110I | CYCGRG | 1 cut(s) | 741 |
| BmgT120I | GGNCC | 1 cut(s) | 272 |
| BmiI | GGNNCC | 1 cut(s) | 867 |
| BmrFI | CCNGG | 2 cut(s) | 384, 512 |
| BmsI | GCATC | 4 cut(s) | 244, 295, 319, 322 |
| BpmI | CTGGAG | 3 cut(s) | 118, 554, 1043 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1214 |
| BpuEI | CTTGAG | 1 cut(s) | 631 |
| BpuMI | CCSGG | 1 cut(s) | 512 |
| BsaBI | GATNNNNATC | 2 cut(s) | 309, 750 |
| BsaI | GGTCTC | 1 cut(s) | 559 |
| BsaJI | CCNNGG | 3 cut(s) | 382, 755, 817 |
| BsaWI | WCCGGW | 1 cut(s) | 568 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 221, 389, 1073 |
| Bse1I | ACTGG | 2 cut(s) | 537, 854 |
| Bse3DI | GCAATG | 2 cut(s) | 8, 188 |
| Bse8I | GATNNNNATC | 2 cut(s) | 309, 750 |
| BseAI | TCCGGA | 1 cut(s) | 568 |
| BseBI | CCWGG | 1 cut(s) | 384 |
| BseDI | CCNNGG | 3 cut(s) | 382, 755, 817 |
| BseGI | GGATG | 1 cut(s) | 310 |
| BseJI | GATNNNNATC | 2 cut(s) | 309, 750 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 221, 389, 1073 |
| BseMI | GCAATG | 2 cut(s) | 8, 188 |
| BseMII | CTCAG | 1 cut(s) | 1205 |
| BseNI | ACTGG | 2 cut(s) | 537, 854 |
| BseRI | GAGGAG | 1 cut(s) | 948 |
| BseSI | GKGCMC | 2 cut(s) | 149, 636 |
| BseXI | GCAGC | 5 cut(s) | 214, 748, 886, 965, 1117 |
| BsgI | GTGCAG | 1 cut(s) | 1116 |
| Bsh1285I | CGRYCG | 1 cut(s) | 516 |
| BsiEI | CGRYCG | 1 cut(s) | 516 |
| BsiHKAI | GWGCWC | 1 cut(s) | 617 |
| BsiHKCI | CYCGRG | 1 cut(s) | 741 |
| BsiSI | CCGG | 2 cut(s) | 512, 569 |
| BslFI | GGGAC | 1 cut(s) | 1126 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 221, 389, 1073 |
| BsmAI | GTCTC | 2 cut(s) | 559, 739 |
| BsmFI | GGGAC | 1 cut(s) | 1126 |
| BsmI | GAATGC | 1 cut(s) | 1083 |
| Bso31I | GGTCTC | 1 cut(s) | 559 |
| BsoBI | CYCGRG | 1 cut(s) | 741 |
| Bsp1286I | GDGCHC | 3 cut(s) | 149, 617, 636 |
| Bsp13I | TCCGGA | 1 cut(s) | 568 |
| Bsp143I | GATC | 6 cut(s) | 101, 121, 580, 745, 865, 1018 |
| BspACI | CCGC | 3 cut(s) | 314, 699, 1043 |
| BspCNI | CTCAG | 1 cut(s) | 1206 |
| BspEI | TCCGGA | 1 cut(s) | 568 |
| BspHI | TCATGA | 1 cut(s) | 283 |
| BspLI | GGNNCC | 1 cut(s) | 867 |
| BspPI | GGATC | 2 cut(s) | 860, 873 |
| BspQI | GCTCTTC | 1 cut(s) | 771 |
| BspTNI | GGTCTC | 1 cut(s) | 559 |
| BsrDI | GCAATG | 2 cut(s) | 8, 188 |
| BsrI | ACTGG | 2 cut(s) | 537, 854 |
| BssECI | CCNNGG | 3 cut(s) | 382, 755, 817 |
| BssMI | GATC | 6 cut(s) | 101, 121, 580, 745, 865, 1018 |
| BssSI | CACGAG | 1 cut(s) | 909 |
| BssT1I | CCWWGG | 1 cut(s) | 755 |
| Bst2BI | CACGAG | 1 cut(s) | 909 |
| Bst2UI | CCWGG | 1 cut(s) | 384 |
| Bst4CI | ACNGT | 7 cut(s) | 272, 446, 623, 782, 818, 845, 975 |
| Bst6I | CTCTTC | 2 cut(s) | 354, 771 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 14 |
| BstC8I | GCNNGC | 3 cut(s) | 15, 185, 1045 |
| BstDEI | CTNAG | 1 cut(s) | 1214 |
| BstDSI | CCRYGG | 1 cut(s) | 817 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 219 |
| BstF5I | GGATG | 1 cut(s) | 310 |
| BstHHI | GCGC | 2 cut(s) | 310, 825 |
| BstKTI | GATC | 6 cut(s) | 104, 124, 583, 748, 868, 1021 |
| BstMAI | GTCTC | 2 cut(s) | 559, 739 |
| BstMBI | GATC | 6 cut(s) | 101, 121, 580, 745, 865, 1018 |
| BstMCI | CGRYCG | 1 cut(s) | 516 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 14, 184, 640, 883 |
| BstNI | CCWGG | 1 cut(s) | 384 |
| BstNSI | RCATGY | 3 cut(s) | 145, 484, 890 |
| BstSCI | CCNGG | 2 cut(s) | 382, 510 |
| BstSLI | GKGCMC | 2 cut(s) | 149, 636 |
| BstV1I | GCAGC | 5 cut(s) | 214, 748, 886, 965, 1117 |
| BstX2I | RGATCY | 2 cut(s) | 865, 1018 |
| BstYI | RGATCY | 2 cut(s) | 865, 1018 |
| BtgI | CCRYGG | 1 cut(s) | 817 |
| BtsCI | GGATG | 1 cut(s) | 310 |
| BtsI | GCAGTG | 1 cut(s) | 723 |
| BtsIMutI | CAGTG | 3 cut(s) | 530, 628, 723 |
| Cac8I | GCNNGC | 3 cut(s) | 15, 185, 1045 |
| CciI | TCATGA | 1 cut(s) | 283 |
| CfoI | GCGC | 2 cut(s) | 310, 825 |
| Cfr13I | GGNCC | 1 cut(s) | 272 |
| Csp6I | GTAC | 1 cut(s) | 379 |
| CviQI | GTAC | 1 cut(s) | 379 |
| DdeI | CTNAG | 1 cut(s) | 1214 |
| DpnI | GATC | 6 cut(s) | 103, 123, 582, 747, 867, 1020 |
| DpnII | GATC | 6 cut(s) | 101, 121, 580, 745, 865, 1018 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 457 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 457 |
| Eam1104I | CTCTTC | 2 cut(s) | 354, 771 |
| EarI | CTCTTC | 2 cut(s) | 354, 771 |
| Eco130I | CCWWGG | 1 cut(s) | 755 |
| Eco31I | GGTCTC | 1 cut(s) | 559 |
| Eco47I | GGWCC | 1 cut(s) | 272 |
| Eco57I | CTGAAG | 1 cut(s) | 1121 |
| Eco88I | CYCGRG | 1 cut(s) | 741 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 219 |
| EcoRII | CCWGG | 1 cut(s) | 382 |
| EcoT14I | CCWWGG | 1 cut(s) | 755 |
| ErhI | CCWWGG | 1 cut(s) | 755 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 111, 143 |
| FaqI | GGGAC | 1 cut(s) | 1126 |
| FauI | CCCGC | 1 cut(s) | 1036 |
| Fnu4HI | GCNGC | 6 cut(s) | 6, 228, 762, 875, 954, 1131 |
| FokI | GGATG | 1 cut(s) | 297 |
| Fsp4HI | GCNGC | 6 cut(s) | 6, 228, 762, 875, 954, 1131 |
| FspAI | RTGCGCAY | 1 cut(s) | 309 |
| FspBI | CTAG | 2 cut(s) | 45, 276 |
| FspI | TGCGCA | 1 cut(s) | 309 |
| GlaI | GCGC | 2 cut(s) | 309, 824 |
| GluI | GCNGC | 6 cut(s) | 6, 228, 762, 875, 954, 1131 |
| GsuI | CTGGAG | 3 cut(s) | 118, 554, 1043 |
| HapII | CCGG | 2 cut(s) | 512, 569 |
| HhaI | GCGC | 2 cut(s) | 310, 825 |
| Hin6I | GCGC | 2 cut(s) | 308, 823 |
| HinP1I | GCGC | 2 cut(s) | 308, 823 |
| HincII | GTYRAC | 1 cut(s) | 1221 |
| HindII | GTYRAC | 1 cut(s) | 1221 |
| HinfI | GANTC | 3 cut(s) | 1051, 1111, 1154 |
| HpaI | GTTAAC | 1 cut(s) | 1221 |
| HpaII | CCGG | 2 cut(s) | 512, 569 |
| HphI | GGTGA | 3 cut(s) | 96, 806, 1105 |
| Hpy166II | GTNNAC | 1 cut(s) | 1221 |
| Hpy8I | GTNNAC | 1 cut(s) | 1221 |
| HpyAV | CCTTC | 3 cut(s) | 855, 1084, 1154 |
| HpyCH4III | ACNGT | 7 cut(s) | 272, 446, 623, 782, 818, 845, 975 |
| HpyCH4V | TGCA | 8 cut(s) | 8, 17, 193, 268, 418, 670, 893, 1133 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 14, 184, 640, 883 |
| HpyF3I | CTNAG | 1 cut(s) | 1214 |
| HspAI | GCGC | 2 cut(s) | 308, 823 |
| Kpn2I | TCCGGA | 1 cut(s) | 568 |
| KspAI | GTTAAC | 1 cut(s) | 1221 |
| Kzo9I | GATC | 6 cut(s) | 101, 121, 580, 745, 865, 1018 |
| LguI | GCTCTTC | 1 cut(s) | 771 |
| LmnI | GCTCC | 2 cut(s) | 252, 961 |
| Lsp1109I | GCAGC | 5 cut(s) | 214, 748, 886, 965, 1117 |
| LweI | GCATC | 4 cut(s) | 244, 295, 319, 322 |
| MaeI | CTAG | 2 cut(s) | 45, 276 |
| MaeIII | GTNAC | 8 cut(s) | 83, 200, 517, 845, 929, 975, 1163, 1181 |
| MalI | GATC | 6 cut(s) | 103, 123, 582, 747, 867, 1020 |
| MboI | GATC | 6 cut(s) | 101, 121, 580, 745, 865, 1018 |
| MboII | GAAGA | 8 cut(s) | 149, 311, 314, 371, 734, 758, 1004, 1149 |
| MfeI | CAATTG | 2 cut(s) | 88, 194 |
| MflI | RGATCY | 2 cut(s) | 865, 1018 |
| MhlI | GDGCHC | 3 cut(s) | 149, 617, 636 |
| MluCI | AATT | 8 cut(s) | 88, 194, 341, 374, 488, 798, 964, 1031 |
| MlyI | GAGTC | 1 cut(s) | 1045 |
| MmeI | TCCRAC | 2 cut(s) | 428, 1008 |
| MroI | TCCGGA | 1 cut(s) | 568 |
| MroXI | GAANNNNTTC | 1 cut(s) | 996 |
| MseI | TTAA | 3 cut(s) | 129, 485, 1220 |
| MslI | CAYNNNNRTG | 1 cut(s) | 288 |
| MspI | CCGG | 2 cut(s) | 512, 569 |
| MspR9I | CCNGG | 2 cut(s) | 384, 512 |
| MunI | CAATTG | 2 cut(s) | 88, 194 |
| Mva1269I | GAATGC | 1 cut(s) | 1083 |
| MvaI | CCWGG | 1 cut(s) | 384 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 14, 184, 640, 883 |
| NciI | CCSGG | 1 cut(s) | 512 |
| NdeII | GATC | 6 cut(s) | 101, 121, 580, 745, 865, 1018 |
| NlaIV | GGNNCC | 1 cut(s) | 867 |
| NmuCI | GTSAC | 2 cut(s) | 845, 1181 |
| NsbI | TGCGCA | 1 cut(s) | 309 |
| NspI | RCATGY | 3 cut(s) | 145, 484, 890 |
| PaeR7I | CTCGAG | 1 cut(s) | 741 |
| PagI | TCATGA | 1 cut(s) | 283 |
| PciI | ACATGT | 1 cut(s) | 480 |
| PciSI | GCTCTTC | 1 cut(s) | 771 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 636 |
| PctI | GAATGC | 1 cut(s) | 1083 |
| PdmI | GAANNNNTTC | 1 cut(s) | 996 |
| PfeI | GAWTC | 2 cut(s) | 1111, 1154 |
| PflFI | GACNNNGTC | 1 cut(s) | 512 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 389 |
| PkrI | GCNGC | 6 cut(s) | 7, 229, 763, 876, 955, 1132 |
| PleI | GAGTC | 1 cut(s) | 1045 |
| PpsI | GAGTC | 1 cut(s) | 1045 |
| PscI | ACATGT | 1 cut(s) | 480 |
| PsiI | TTATAA | 1 cut(s) | 1228 |
| Psp6I | CCWGG | 1 cut(s) | 382 |
| PspGI | CCWGG | 1 cut(s) | 382 |
| PspN4I | GGNNCC | 1 cut(s) | 867 |
| PspPI | GGNCC | 1 cut(s) | 272 |
| PsuI | RGATCY | 2 cut(s) | 865, 1018 |
| PsyI | GACNNNGTC | 1 cut(s) | 512 |
| RsaI | GTAC | 1 cut(s) | 380 |
| RsaNI | GTAC | 1 cut(s) | 379 |
| RseI | CAYNNNNRTG | 1 cut(s) | 288 |
| SapI | GCTCTTC | 1 cut(s) | 771 |
| SaqAI | TTAA | 3 cut(s) | 129, 485, 1220 |
| SatI | GCNGC | 6 cut(s) | 6, 228, 762, 875, 954, 1131 |
| Sau3AI | GATC | 6 cut(s) | 101, 121, 580, 745, 865, 1018 |
| Sau96I | GGNCC | 1 cut(s) | 272 |
| SchI | GAGTC | 1 cut(s) | 1045 |
| ScrFI | CCNGG | 2 cut(s) | 384, 512 |
| SduI | GDGCHC | 3 cut(s) | 149, 617, 636 |
| SfaNI | GCATC | 4 cut(s) | 244, 295, 319, 322 |
| Sfr274I | CTCGAG | 1 cut(s) | 741 |
| SinI | GGWCC | 1 cut(s) | 272 |
| SlaI | CTCGAG | 1 cut(s) | 741 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 288 |
| SmlI | CTYRAG | 2 cut(s) | 610, 741 |
| SmoI | CTYRAG | 2 cut(s) | 610, 741 |
| Sse9I | AATT | 8 cut(s) | 88, 194, 341, 374, 488, 798, 964, 1031 |
| SsiI | CCGC | 3 cut(s) | 314, 699, 1043 |
| SspMI | CTAG | 2 cut(s) | 45, 276 |
| StyD4I | CCNGG | 2 cut(s) | 382, 510 |
| StyI | CCWWGG | 1 cut(s) | 755 |
| TaaI | ACNGT | 7 cut(s) | 272, 446, 623, 782, 818, 845, 975 |
| TaqI | TCGA | 3 cut(s) | 639, 742, 840 |
| TasI | AATT | 8 cut(s) | 88, 194, 341, 374, 488, 798, 964, 1031 |
| TfiI | GAWTC | 2 cut(s) | 1111, 1154 |
| Tru1I | TTAA | 3 cut(s) | 129, 485, 1220 |
| Tru9I | TTAA | 3 cut(s) | 129, 485, 1220 |
| TscAI | CASTG | 3 cut(s) | 537, 628, 723 |
| TseFI | GTSAC | 2 cut(s) | 845, 1181 |
| TseI | GCWGC | 6 cut(s) | 5, 227, 761, 874, 953, 1130 |
| Tsp45I | GTSAC | 2 cut(s) | 845, 1181 |
| TspDTI | ATGAA | 6 cut(s) | 149, 400, 595, 953, 1124, 1149 |
| TspRI | CASTG | 3 cut(s) | 537, 628, 723 |
| Tth111I | GACNNNGTC | 1 cut(s) | 512 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 389 |
| VpaK11BI | GGWCC | 1 cut(s) | 272 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 219 |
| XapI | RAATTY | 2 cut(s) | 341, 964 |
| XceI | RCATGY | 3 cut(s) | 145, 484, 890 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 257 |
| XhoI | CTCGAG | 1 cut(s) | 741 |
| XmnI | GAANNNNTTC | 1 cut(s) | 996 |
| XspI | CTAG | 2 cut(s) | 45, 276 |