Transposase-associated domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1036 |
| Acc36I | ACCTGC | 1 cut(s) | 616 |
| AccIII | TCCGGA | 1 cut(s) | 1569 |
| AciI | CCGC | 5 cut(s) | 126, 192, 358, 906, 1644 |
| AclWI | GGATC | 3 cut(s) | 17, 78, 992 |
| AcsI | RAATTY | 5 cut(s) | 254, 274, 473, 1613, 1664 |
| AcuI | CTGAAG | 1 cut(s) | 414 |
| AcyI | GRCGYC | 1 cut(s) | 1033 |
| AfaI | GTAC | 6 cut(s) | 159, 377, 618, 937, 1054, 1519 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 135, 298, 502, 576, 577, 1097 |
| AgsI | TTSAA | 9 cut(s) | 122, 213, 272, 284, 478, 672, 763, 1236, 1625 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1023 |
| AjiI | CACGTC | 1 cut(s) | 1025 |
| AjnI | CCWGG | 4 cut(s) | 224, 664, 1330, 1345 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 146, 178, 446, 478 |
| AluBI | AGCT | 7 cut(s) | 235, 392, 560, 766, 1130, 1415, 1544 |
| AluI | AGCT | 7 cut(s) | 235, 392, 560, 766, 1130, 1415, 1544 |
| Alw26I | GTCTC | 3 cut(s) | 739, 788, 950 |
| AlwI | GGATC | 3 cut(s) | 17, 78, 992 |
| Aor13HI | TCCGGA | 1 cut(s) | 1569 |
| AoxI | GGCC | 5 cut(s) | 300, 645, 1250, 1555, 1580 |
| ApeKI | GCWGC | 3 cut(s) | 1415, 1460, 1544 |
| ApoI | RAATTY | 5 cut(s) | 254, 274, 473, 1613, 1664 |
| AseI | ATTAAT | 1 cut(s) | 1359 |
| AspLEI | GCGC | 1 cut(s) | 705 |
| AspS9I | GGNCC | 4 cut(s) | 1251, 1334, 1556, 1648 |
| AsuHPI | GGTGA | 8 cut(s) | 145, 163, 191, 452, 558, 803, 1116, 1610 |
| AvaII | GGWCC | 2 cut(s) | 1334, 1648 |
| AxyI | CCTNAGG | 1 cut(s) | 501 |
| BanII | GRGCYC | 1 cut(s) | 365 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1289, 1321 |
| BauI | CACGAG | 1 cut(s) | 308 |
| BbsI | GAAGAC | 3 cut(s) | 498, 905, 1019 |
| BbvI | GCAGC | 3 cut(s) | 1402, 1472, 1531 |
| BccI | CCATC | 8 cut(s) | 142, 413, 578, 782, 962, 1091, 1199, 1694 |
| BceAI | ACGGC | 1 cut(s) | 113 |
| BciT130I | CCWGG | 4 cut(s) | 226, 666, 1332, 1347 |
| BciVI | GTATCC | 1 cut(s) | 1164 |
| BcoDI | GTCTC | 3 cut(s) | 739, 788, 950 |
| BfaI | CTAG | 5 cut(s) | 20, 366, 512, 561, 698 |
| BfmI | CTRYAG | 1 cut(s) | 609 |
| BfuAI | ACCTGC | 1 cut(s) | 616 |
| BfuI | GTATCC | 1 cut(s) | 1164 |
| BisI | GCNGC | 3 cut(s) | 1416, 1461, 1545 |
| BlsI | GCNGC | 3 cut(s) | 1417, 1462, 1546 |
| Bme1390I | CCNGG | 4 cut(s) | 226, 666, 1332, 1347 |
| Bme18I | GGWCC | 2 cut(s) | 1334, 1648 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1023 |
| BmgBI | CACGTC | 1 cut(s) | 1025 |
| BmgT120I | GGNCC | 4 cut(s) | 1251, 1334, 1556, 1648 |
| BmiI | GGNNCC | 4 cut(s) | 362, 1336, 1374, 1649 |
| BmrFI | CCNGG | 4 cut(s) | 226, 666, 1332, 1347 |
| BmsI | GCATC | 2 cut(s) | 526, 1120 |
| BpiI | GAAGAC | 3 cut(s) | 498, 905, 1019 |
| BpmI | CTGGAG | 1 cut(s) | 1329 |
| BsaAI | YACGTR | 1 cut(s) | 1422 |
| BsaHI | GRCGYC | 1 cut(s) | 1033 |
| BsaJI | CCNNGG | 6 cut(s) | 129, 225, 1283, 1346, 1521, 1657 |
| BsaWI | WCCGGW | 2 cut(s) | 25, 1569 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 26, 56, 352, 382 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 135, 298, 502, 576, 577, 1097 |
| Bse118I | RCCGGY | 1 cut(s) | 1553 |
| Bse1I | ACTGG | 2 cut(s) | 899, 909 |
| Bse21I | CCTNAGG | 1 cut(s) | 501 |
| BseAI | TCCGGA | 1 cut(s) | 1569 |
| BseBI | CCWGG | 4 cut(s) | 226, 666, 1332, 1347 |
| BseDI | CCNNGG | 6 cut(s) | 129, 225, 1283, 1346, 1521, 1657 |
| BseGI | GGATG | 5 cut(s) | 436, 526, 586, 1111, 1411 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 135, 298, 502, 576, 577, 1097 |
| BseMII | CTCAG | 1 cut(s) | 492 |
| BseNI | ACTGG | 2 cut(s) | 899, 909 |
| BseRI | GAGGAG | 3 cut(s) | 47, 50, 744 |
| BseXI | GCAGC | 3 cut(s) | 1402, 1472, 1531 |
| BshFI | GGCC | 5 cut(s) | 302, 647, 1252, 1557, 1582 |
| BsiSI | CCGG | 4 cut(s) | 26, 1490, 1554, 1570 |
| BslFI | GGGAC | 2 cut(s) | 1320, 1661 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 135, 298, 502, 576, 577, 1097 |
| BsmAI | GTCTC | 3 cut(s) | 739, 788, 950 |
| BsmFI | GGGAC | 2 cut(s) | 1320, 1661 |
| BsnI | GGCC | 5 cut(s) | 302, 647, 1252, 1557, 1582 |
| Bsp1286I | GDGCHC | 1 cut(s) | 365 |
| Bsp13I | TCCGGA | 1 cut(s) | 1569 |
| Bsp1407I | TGTACA | 1 cut(s) | 375 |
| Bsp143I | GATC | 6 cut(s) | 22, 70, 75, 92, 984, 1084 |
| Bsp19I | CCATGG | 1 cut(s) | 1283 |
| BspACI | CCGC | 5 cut(s) | 126, 192, 358, 906, 1644 |
| BspANI | GGCC | 5 cut(s) | 302, 647, 1252, 1557, 1582 |
| BspCNI | CTCAG | 1 cut(s) | 493 |
| BspEI | TCCGGA | 1 cut(s) | 1569 |
| BspLI | GGNNCC | 4 cut(s) | 362, 1336, 1374, 1649 |
| BspMAI | CTGCAG | 1 cut(s) | 613 |
| BspMI | ACCTGC | 1 cut(s) | 616 |
| BspPI | GGATC | 3 cut(s) | 17, 78, 992 |
| BsrFI | RCCGGY | 1 cut(s) | 1553 |
| BsrGI | TGTACA | 1 cut(s) | 375 |
| BsrI | ACTGG | 2 cut(s) | 899, 909 |
| BssAI | RCCGGY | 1 cut(s) | 1553 |
| BssECI | CCNNGG | 6 cut(s) | 129, 225, 1283, 1346, 1521, 1657 |
| BssMI | GATC | 6 cut(s) | 22, 70, 75, 92, 984, 1084 |
| BssNI | GRCGYC | 1 cut(s) | 1033 |
| BssSI | CACGAG | 1 cut(s) | 308 |
| BssT1I | CCWWGG | 3 cut(s) | 1283, 1521, 1657 |
| Bst2BI | CACGAG | 1 cut(s) | 308 |
| Bst2UI | CCWGG | 4 cut(s) | 226, 666, 1332, 1347 |
| Bst4CI | ACNGT | 4 cut(s) | 748, 1267, 1443, 1467 |
| BstACI | GRCGYC | 1 cut(s) | 1033 |
| BstAUI | TGTACA | 1 cut(s) | 375 |
| BstBAI | YACGTR | 1 cut(s) | 1422 |
| BstC8I | GCNNGC | 2 cut(s) | 1077, 1555 |
| BstDEI | CTNAG | 3 cut(s) | 466, 501, 1531 |
| BstDSI | CCRYGG | 2 cut(s) | 129, 1283 |
| BstF5I | GGATG | 5 cut(s) | 436, 526, 586, 1111, 1411 |
| BstHHI | GCGC | 1 cut(s) | 705 |
| BstKTI | GATC | 6 cut(s) | 25, 73, 78, 95, 987, 1087 |
| BstMAI | GTCTC | 3 cut(s) | 739, 788, 950 |
| BstMBI | GATC | 6 cut(s) | 22, 70, 75, 92, 984, 1084 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1541, 1550 |
| BstNI | CCWGG | 4 cut(s) | 226, 666, 1332, 1347 |
| BstNSI | RCATGY | 1 cut(s) | 1079 |
| BstSCI | CCNGG | 4 cut(s) | 224, 664, 1330, 1345 |
| BstSFI | CTRYAG | 1 cut(s) | 609 |
| BstSNI | TACGTA | 1 cut(s) | 1422 |
| BstV1I | GCAGC | 3 cut(s) | 1402, 1472, 1531 |
| BstV2I | GAAGAC | 3 cut(s) | 498, 905, 1019 |
| BstX2I | RGATCY | 3 cut(s) | 22, 70, 984 |
| BstYI | RGATCY | 3 cut(s) | 22, 70, 984 |
| Bsu36I | CCTNAGG | 1 cut(s) | 501 |
| BsuI | GTATCC | 1 cut(s) | 1164 |
| BsuRI | GGCC | 5 cut(s) | 302, 647, 1252, 1557, 1582 |
| BtgI | CCRYGG | 2 cut(s) | 129, 1283 |
| BtgZI | GCGATG | 1 cut(s) | 161 |
| BtrI | CACGTC | 1 cut(s) | 1025 |
| BtsCI | GGATG | 5 cut(s) | 436, 526, 586, 1111, 1411 |
| BtsI | GCAGTG | 1 cut(s) | 120 |
| BtsIMutI | CAGTG | 5 cut(s) | 102, 120, 1080, 1448, 1463 |
| BveI | ACCTGC | 1 cut(s) | 616 |
| Cac8I | GCNNGC | 2 cut(s) | 1077, 1555 |
| CfoI | GCGC | 1 cut(s) | 705 |
| Cfr10I | RCCGGY | 1 cut(s) | 1553 |
| Cfr13I | GGNCC | 4 cut(s) | 1251, 1334, 1556, 1648 |
| Csp6I | GTAC | 6 cut(s) | 158, 376, 617, 936, 1053, 1518 |
| CviAII | CATG | 9 cut(s) | 385, 437, 517, 595, 886, 1066, 1071, 1076, 1284 |
| CviQI | GTAC | 6 cut(s) | 158, 376, 617, 936, 1053, 1518 |
| DdeI | CTNAG | 3 cut(s) | 466, 501, 1531 |
| DpnI | GATC | 6 cut(s) | 24, 72, 77, 94, 986, 1086 |
| DpnII | GATC | 6 cut(s) | 22, 70, 75, 92, 984, 1084 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1023 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1023 |
| EciI | GGCGGA | 1 cut(s) | 373 |
| Eco105I | TACGTA | 1 cut(s) | 1422 |
| Eco130I | CCWWGG | 3 cut(s) | 1283, 1521, 1657 |
| Eco24I | GRGCYC | 1 cut(s) | 365 |
| Eco47I | GGWCC | 2 cut(s) | 1334, 1648 |
| Eco57I | CTGAAG | 1 cut(s) | 414 |
| Eco81I | CCTNAGG | 1 cut(s) | 501 |
| EcoRI | GAATTC | 1 cut(s) | 473 |
| EcoRII | CCWGG | 4 cut(s) | 224, 664, 1330, 1345 |
| EcoT14I | CCWWGG | 3 cut(s) | 1283, 1521, 1657 |
| EcoT22I | ATGCAT | 1 cut(s) | 541 |
| EcoT38I | GRGCYC | 1 cut(s) | 365 |
| ErhI | CCWWGG | 3 cut(s) | 1283, 1521, 1657 |
| FaeI | CATG | 9 cut(s) | 388, 440, 520, 598, 889, 1069, 1074, 1079, 1287 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1514, 1546 |
| FaqI | GGGAC | 2 cut(s) | 1320, 1661 |
| FatI | CATG | 9 cut(s) | 384, 436, 516, 594, 885, 1065, 1070, 1075, 1283 |
| FauI | CCCGC | 1 cut(s) | 1637 |
| FauNDI | CATATG | 3 cut(s) | 1227, 1495, 1537 |
| Fnu4HI | GCNGC | 3 cut(s) | 1416, 1461, 1545 |
| FokI | GGATG | 5 cut(s) | 443, 533, 593, 1098, 1418 |
| FriOI | GRGCYC | 1 cut(s) | 365 |
| Fsp4HI | GCNGC | 3 cut(s) | 1416, 1461, 1545 |
| FspBI | CTAG | 5 cut(s) | 20, 366, 512, 561, 698 |
| GlaI | GCGC | 1 cut(s) | 704 |
| GluI | GCNGC | 3 cut(s) | 1416, 1461, 1545 |
| GsuI | CTGGAG | 1 cut(s) | 1329 |
| HaeIII | GGCC | 5 cut(s) | 302, 647, 1252, 1557, 1582 |
| HapII | CCGG | 4 cut(s) | 26, 1490, 1554, 1570 |
| HhaI | GCGC | 1 cut(s) | 705 |
| Hin1I | GRCGYC | 1 cut(s) | 1033 |
| Hin1II | CATG | 9 cut(s) | 388, 440, 520, 598, 889, 1069, 1074, 1079, 1287 |
| Hin6I | GCGC | 1 cut(s) | 703 |
| HinP1I | GCGC | 1 cut(s) | 703 |
| HincII | GTYRAC | 1 cut(s) | 531 |
| HindII | GTYRAC | 1 cut(s) | 531 |
| HinfI | GANTC | 4 cut(s) | 87, 624, 732, 1121 |
| HpaII | CCGG | 4 cut(s) | 26, 1490, 1554, 1570 |
| HphI | GGTGA | 8 cut(s) | 145, 163, 191, 452, 558, 803, 1116, 1610 |
| Hpy166II | GTNNAC | 7 cut(s) | 376, 531, 566, 1053, 1270, 1528, 1564 |
| Hpy188I | TCNGA | 6 cut(s) | 75, 92, 266, 739, 1179, 1510 |
| Hpy188III | TCNNGA | 4 cut(s) | 407, 726, 785, 1570 |
| Hpy8I | GTNNAC | 7 cut(s) | 376, 531, 566, 1053, 1270, 1528, 1564 |
| Hpy99I | CGWCG | 1 cut(s) | 1035 |
| HpyAV | CCTTC | 3 cut(s) | 148, 389, 975 |
| HpyCH4III | ACNGT | 4 cut(s) | 748, 1267, 1443, 1467 |
| HpyCH4IV | ACGT | 4 cut(s) | 1024, 1033, 1055, 1421 |
| HpyCH4V | TGCA | 9 cut(s) | 416, 539, 590, 611, 885, 992, 1166, 1547, 1697 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1541, 1550 |
| HpyF3I | CTNAG | 3 cut(s) | 466, 501, 1531 |
| HpySE526I | ACGT | 4 cut(s) | 1024, 1033, 1055, 1421 |
| Hsp92I | GRCGYC | 1 cut(s) | 1033 |
| Hsp92II | CATG | 9 cut(s) | 388, 440, 520, 598, 889, 1069, 1074, 1079, 1287 |
| HspAI | GCGC | 1 cut(s) | 703 |
| Kpn2I | TCCGGA | 1 cut(s) | 1569 |
| KroI | GCCGGC | 1 cut(s) | 1553 |
| KroNI | GCCGGC | 1 cut(s) | 1555 |
| Kzo9I | GATC | 6 cut(s) | 22, 70, 75, 92, 984, 1084 |
| LmnI | GCTCC | 3 cut(s) | 360, 1378, 1412 |
| Lsp1109I | GCAGC | 3 cut(s) | 1402, 1472, 1531 |
| LweI | GCATC | 2 cut(s) | 526, 1120 |
| MaeI | CTAG | 5 cut(s) | 20, 366, 512, 561, 698 |
| MaeII | ACGT | 4 cut(s) | 1024, 1033, 1055, 1421 |
| MaeIII | GTNAC | 1 cut(s) | 1015 |
| MalI | GATC | 6 cut(s) | 24, 72, 77, 94, 986, 1086 |
| MboI | GATC | 6 cut(s) | 22, 70, 75, 92, 984, 1084 |
| MboII | GAAGA | 7 cut(s) | 455, 503, 905, 977, 990, 1019, 1113 |
| MfeI | CAATTG | 1 cut(s) | 1548 |
| MflI | RGATCY | 3 cut(s) | 22, 70, 984 |
| MhlI | GDGCHC | 1 cut(s) | 365 |
| MluCI | AATT | 8 cut(s) | 254, 274, 473, 861, 1139, 1548, 1613, 1664 |
| MlyI | GAGTC | 3 cut(s) | 96, 618, 741 |
| MmeI | TCCRAC | 3 cut(s) | 244, 669, 1390 |
| Mph1103I | ATGCAT | 1 cut(s) | 541 |
| MroI | TCCGGA | 1 cut(s) | 1569 |
| MroNI | GCCGGC | 1 cut(s) | 1553 |
| MseI | TTAA | 8 cut(s) | 231, 258, 321, 848, 1212, 1262, 1359, 1680 |
| MslI | CAYNNNNRTG | 3 cut(s) | 921, 1361, 1468 |
| MspI | CCGG | 4 cut(s) | 26, 1490, 1554, 1570 |
| MspR9I | CCNGG | 4 cut(s) | 226, 666, 1332, 1347 |
| MunI | CAATTG | 1 cut(s) | 1548 |
| MvaI | CCWGG | 4 cut(s) | 226, 666, 1332, 1347 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1541, 1550 |
| NaeI | GCCGGC | 1 cut(s) | 1555 |
| NcoI | CCATGG | 1 cut(s) | 1283 |
| NdeI | CATATG | 3 cut(s) | 1227, 1495, 1537 |
| NdeII | GATC | 6 cut(s) | 22, 70, 75, 92, 984, 1084 |
| NgoMIV | GCCGGC | 1 cut(s) | 1553 |
| NlaIII | CATG | 9 cut(s) | 388, 440, 520, 598, 889, 1069, 1074, 1079, 1287 |
| NlaIV | GGNNCC | 4 cut(s) | 362, 1336, 1374, 1649 |
| NmuCI | GTSAC | 1 cut(s) | 1015 |
| NsiI | ATGCAT | 1 cut(s) | 541 |
| NspI | RCATGY | 1 cut(s) | 1079 |
| PaeI | GCATGC | 1 cut(s) | 1079 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1030 |
| PdiI | GCCGGC | 1 cut(s) | 1555 |
| PfeI | GAWTC | 1 cut(s) | 1121 |
| PkrI | GCNGC | 3 cut(s) | 1417, 1462, 1546 |
| PleI | GAGTC | 3 cut(s) | 95, 618, 740 |
| PpsI | GAGTC | 3 cut(s) | 95, 618, 740 |
| Ppu21I | YACGTR | 1 cut(s) | 1422 |
| PshBI | ATTAAT | 1 cut(s) | 1359 |
| Psp6I | CCWGG | 4 cut(s) | 224, 664, 1330, 1345 |
| PspGI | CCWGG | 4 cut(s) | 224, 664, 1330, 1345 |
| PspN4I | GGNNCC | 4 cut(s) | 362, 1336, 1374, 1649 |
| PspPI | GGNCC | 4 cut(s) | 1251, 1334, 1556, 1648 |
| PstI | CTGCAG | 1 cut(s) | 613 |
| PsuI | RGATCY | 3 cut(s) | 22, 70, 984 |
| RsaI | GTAC | 6 cut(s) | 159, 377, 618, 937, 1054, 1519 |
| RsaNI | GTAC | 6 cut(s) | 158, 376, 617, 936, 1053, 1518 |
| RseI | CAYNNNNRTG | 3 cut(s) | 921, 1361, 1468 |
| SaqAI | TTAA | 8 cut(s) | 231, 258, 321, 848, 1212, 1262, 1359, 1680 |
| SatI | GCNGC | 3 cut(s) | 1416, 1461, 1545 |
| Sau3AI | GATC | 6 cut(s) | 22, 70, 75, 92, 984, 1084 |
| Sau96I | GGNCC | 4 cut(s) | 1251, 1334, 1556, 1648 |
| SchI | GAGTC | 3 cut(s) | 96, 618, 741 |
| ScrFI | CCNGG | 4 cut(s) | 226, 666, 1332, 1347 |
| SduI | GDGCHC | 1 cut(s) | 365 |
| SfaNI | GCATC | 2 cut(s) | 526, 1120 |
| SfcI | CTRYAG | 1 cut(s) | 609 |
| SinI | GGWCC | 2 cut(s) | 1334, 1648 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 921, 1361, 1468 |
| SnaBI | TACGTA | 1 cut(s) | 1422 |
| SphI | GCATGC | 1 cut(s) | 1079 |
| Sse9I | AATT | 8 cut(s) | 254, 274, 473, 861, 1139, 1548, 1613, 1664 |
| SsiI | CCGC | 5 cut(s) | 126, 192, 358, 906, 1644 |
| SspMI | CTAG | 5 cut(s) | 20, 366, 512, 561, 698 |
| StyD4I | CCNGG | 4 cut(s) | 224, 664, 1330, 1345 |
| StyI | CCWWGG | 3 cut(s) | 1283, 1521, 1657 |
| TaaI | ACNGT | 4 cut(s) | 748, 1267, 1443, 1467 |
| TaiI | ACGT | 4 cut(s) | 1027, 1036, 1058, 1424 |
| TaqI | TCGA | 4 cut(s) | 334, 725, 1030, 1087 |
| TaqII | GACCGA | 1 cut(s) | 1211 |
| TasI | AATT | 8 cut(s) | 254, 274, 473, 861, 1139, 1548, 1613, 1664 |
| TatI | WGTACW | 2 cut(s) | 375, 616 |
| TfiI | GAWTC | 1 cut(s) | 1121 |
| Tru1I | TTAA | 8 cut(s) | 231, 258, 321, 848, 1212, 1262, 1359, 1680 |
| Tru9I | TTAA | 8 cut(s) | 231, 258, 321, 848, 1212, 1262, 1359, 1680 |
| TscAI | CASTG | 5 cut(s) | 102, 120, 1087, 1448, 1470 |
| TseFI | GTSAC | 1 cut(s) | 1015 |
| TseI | GCWGC | 3 cut(s) | 1415, 1460, 1544 |
| Tsp45I | GTSAC | 1 cut(s) | 1015 |
| TspRI | CASTG | 5 cut(s) | 102, 120, 1087, 1448, 1470 |
| VpaK11BI | GGWCC | 2 cut(s) | 1334, 1648 |
| VspI | ATTAAT | 1 cut(s) | 1359 |
| XapI | RAATTY | 5 cut(s) | 254, 274, 473, 1613, 1664 |
| XceI | RCATGY | 1 cut(s) | 1079 |
| XspI | CTAG | 5 cut(s) | 20, 366, 512, 561, 698 |
| ZraI | GACGTC | 1 cut(s) | 1034 |
| Zsp2I | ATGCAT | 1 cut(s) | 541 |