No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 2 cut(s) | 195, 688 |
| AciI | CCGC | 2 cut(s) | 195, 688 |
| AclWI | GGATC | 3 cut(s) | 146, 505, 548 |
| AcoI | YGGCCR | 2 cut(s) | 118, 711 |
| AcuI | CTGAAG | 1 cut(s) | 687 |
| AfaI | GTAC | 6 cut(s) | 65, 278, 314, 416, 654, 695 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 673, 779 |
| AflII | CTTAAG | 1 cut(s) | 464 |
| AflIII | ACRYGT | 3 cut(s) | 68, 177, 696 |
| AgsI | TTSAA | 2 cut(s) | 272, 341 |
| AluBI | AGCT | 3 cut(s) | 251, 619, 719 |
| AluI | AGCT | 3 cut(s) | 251, 619, 719 |
| Alw26I | GTCTC | 3 cut(s) | 125, 368, 779 |
| AlwI | GGATC | 3 cut(s) | 146, 505, 548 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 37 |
| AoxI | GGCC | 2 cut(s) | 118, 711 |
| ApeKI | GCWGC | 3 cut(s) | 31, 235, 430 |
| AspLEI | GCGC | 1 cut(s) | 206 |
| AspS9I | GGNCC | 1 cut(s) | 469 |
| AsuC2I | CCSGG | 1 cut(s) | 230 |
| AsuHPI | GGTGA | 1 cut(s) | 98 |
| AvaII | GGWCC | 1 cut(s) | 469 |
| AxyI | CCTNAGG | 1 cut(s) | 38 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 644, 677 |
| BalI | TGGCCA | 1 cut(s) | 120 |
| BbsI | GAAGAC | 3 cut(s) | 335, 440, 693 |
| BbvI | GCAGC | 3 cut(s) | 43, 247, 417 |
| BccI | CCATC | 2 cut(s) | 343, 720 |
| BceAI | ACGGC | 2 cut(s) | 177, 726 |
| BciVI | GTATCC | 1 cut(s) | 488 |
| BclI | TGATCA | 1 cut(s) | 112 |
| BcnI | CCSGG | 1 cut(s) | 230 |
| BcoDI | GTCTC | 3 cut(s) | 125, 368, 779 |
| BfaI | CTAG | 1 cut(s) | 246 |
| BfmI | CTRYAG | 2 cut(s) | 410, 627 |
| BfrI | CTTAAG | 1 cut(s) | 464 |
| BfuI | GTATCC | 1 cut(s) | 488 |
| BglII | AGATCT | 1 cut(s) | 487 |
| BisI | GCNGC | 3 cut(s) | 32, 236, 431 |
| BlsI | GCNGC | 3 cut(s) | 33, 237, 432 |
| Bme1390I | CCNGG | 1 cut(s) | 230 |
| Bme18I | GGWCC | 1 cut(s) | 469 |
| BmgT120I | GGNCC | 1 cut(s) | 469 |
| BmrFI | CCNGG | 1 cut(s) | 230 |
| BmsI | GCATC | 2 cut(s) | 13, 417 |
| BoxI | GACNNNNGTC | 1 cut(s) | 588 |
| BpiI | GAAGAC | 3 cut(s) | 335, 440, 693 |
| BpuEI | CTTGAG | 2 cut(s) | 192, 704 |
| BpuMI | CCSGG | 1 cut(s) | 230 |
| Bsa29I | ATCGAT | 1 cut(s) | 7 |
| BsaBI | GATNNNNATC | 1 cut(s) | 405 |
| BsaJI | CCNNGG | 2 cut(s) | 436, 571 |
| BsaWI | WCCGGW | 1 cut(s) | 592 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 673, 779 |
| Bse21I | CCTNAGG | 1 cut(s) | 38 |
| Bse8I | GATNNNNATC | 1 cut(s) | 405 |
| BseCI | ATCGAT | 1 cut(s) | 7 |
| BseDI | CCNNGG | 2 cut(s) | 436, 571 |
| BseGI | GGATG | 1 cut(s) | 143 |
| BseJI | GATNNNNATC | 1 cut(s) | 405 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 673, 779 |
| BseMII | CTCAG | 2 cut(s) | 29, 120 |
| BseRI | GAGGAG | 1 cut(s) | 55 |
| BseXI | GCAGC | 3 cut(s) | 43, 247, 417 |
| BsgI | GTGCAG | 1 cut(s) | 254 |
| Bsh1285I | CGRYCG | 1 cut(s) | 387 |
| BshFI | GGCC | 2 cut(s) | 120, 713 |
| BshVI | ATCGAT | 1 cut(s) | 7 |
| BsiEI | CGRYCG | 1 cut(s) | 387 |
| BsiSI | CCGG | 2 cut(s) | 230, 593 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 673, 779 |
| BsmAI | GTCTC | 3 cut(s) | 125, 368, 779 |
| BsmBI | CGTCTC | 1 cut(s) | 125 |
| BsmI | GAATGC | 1 cut(s) | 164 |
| BsnI | GGCC | 2 cut(s) | 120, 713 |
| Bsp1407I | TGTACA | 1 cut(s) | 693 |
| Bsp143I | GATC | 5 cut(s) | 112, 151, 487, 510, 553 |
| BspACI | CCGC | 2 cut(s) | 195, 688 |
| BspANI | GGCC | 2 cut(s) | 120, 713 |
| BspCNI | CTCAG | 2 cut(s) | 30, 121 |
| BspDI | ATCGAT | 1 cut(s) | 7 |
| BspHI | TCATGA | 1 cut(s) | 168 |
| BspMAI | CTGCAG | 1 cut(s) | 631 |
| BspPI | GGATC | 3 cut(s) | 146, 505, 548 |
| BspTI | CTTAAG | 1 cut(s) | 464 |
| BsrBI | CCGCTC | 2 cut(s) | 195, 688 |
| BsrGI | TGTACA | 1 cut(s) | 693 |
| BssECI | CCNNGG | 2 cut(s) | 436, 571 |
| BssMI | GATC | 5 cut(s) | 112, 151, 487, 510, 553 |
| BssT1I | CCWWGG | 1 cut(s) | 571 |
| Bst4CI | ACNGT | 6 cut(s) | 86, 216, 334, 388, 414, 440 |
| Bst6I | CTCTTC | 1 cut(s) | 545 |
| BstAFI | CTTAAG | 1 cut(s) | 464 |
| BstAUI | TGTACA | 1 cut(s) | 693 |
| BstC8I | GCNNGC | 3 cut(s) | 291, 520, 631 |
| BstDEI | CTNAG | 2 cut(s) | 38, 129 |
| BstDSI | CCRYGG | 1 cut(s) | 436 |
| BstF5I | GGATG | 1 cut(s) | 143 |
| BstHHI | GCGC | 1 cut(s) | 206 |
| BstKTI | GATC | 5 cut(s) | 115, 154, 490, 513, 556 |
| BstMAI | GTCTC | 3 cut(s) | 125, 368, 779 |
| BstMBI | GATC | 5 cut(s) | 112, 151, 487, 510, 553 |
| BstMCI | CGRYCG | 1 cut(s) | 387 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 201 |
| BstNSI | RCATGY | 5 cut(s) | 72, 181, 522, 591, 700 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 588 |
| BstSCI | CCNGG | 1 cut(s) | 228 |
| BstSFI | CTRYAG | 2 cut(s) | 410, 627 |
| BstV1I | GCAGC | 3 cut(s) | 43, 247, 417 |
| BstV2I | GAAGAC | 3 cut(s) | 335, 440, 693 |
| BstX2I | RGATCY | 3 cut(s) | 487, 510, 553 |
| BstYI | RGATCY | 3 cut(s) | 487, 510, 553 |
| Bsu15I | ATCGAT | 1 cut(s) | 7 |
| Bsu36I | CCTNAGG | 1 cut(s) | 38 |
| BsuI | GTATCC | 1 cut(s) | 488 |
| BsuRI | GGCC | 2 cut(s) | 120, 713 |
| BsuTUI | ATCGAT | 1 cut(s) | 7 |
| BtgI | CCRYGG | 1 cut(s) | 436 |
| BtsCI | GGATG | 1 cut(s) | 143 |
| BtsI | GCAGTG | 2 cut(s) | 258, 417 |
| BtsIMutI | CAGTG | 3 cut(s) | 258, 417, 603 |
| Cac8I | GCNNGC | 3 cut(s) | 291, 520, 631 |
| CaiI | CAGNNNCTG | 1 cut(s) | 37 |
| CciI | TCATGA | 1 cut(s) | 168 |
| CfoI | GCGC | 1 cut(s) | 206 |
| Cfr13I | GGNCC | 1 cut(s) | 469 |
| ClaI | ATCGAT | 1 cut(s) | 7 |
| CseI | GACGC | 2 cut(s) | 593, 813 |
| Csp6I | GTAC | 6 cut(s) | 64, 277, 313, 415, 653, 694 |
| CviQI | GTAC | 6 cut(s) | 64, 277, 313, 415, 653, 694 |
| DdeI | CTNAG | 2 cut(s) | 38, 129 |
| DpnI | GATC | 5 cut(s) | 114, 153, 489, 512, 555 |
| DpnII | GATC | 5 cut(s) | 112, 151, 487, 510, 553 |
| EaeI | YGGCCR | 2 cut(s) | 118, 711 |
| Eam1104I | CTCTTC | 1 cut(s) | 545 |
| EarI | CTCTTC | 1 cut(s) | 545 |
| Eco130I | CCWWGG | 1 cut(s) | 571 |
| Eco47I | GGWCC | 1 cut(s) | 469 |
| Eco57I | CTGAAG | 1 cut(s) | 687 |
| Eco81I | CCTNAGG | 1 cut(s) | 38 |
| EcoT14I | CCWWGG | 1 cut(s) | 571 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 520 |
| ErhI | CCWWGG | 1 cut(s) | 571 |
| Esp3I | CGTCTC | 1 cut(s) | 125 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 747, 779 |
| FbaI | TGATCA | 1 cut(s) | 112 |
| Fnu4HI | GCNGC | 3 cut(s) | 32, 236, 431 |
| FokI | GGATG | 1 cut(s) | 130 |
| Fsp4HI | GCNGC | 3 cut(s) | 32, 236, 431 |
| FspBI | CTAG | 1 cut(s) | 246 |
| GlaI | GCGC | 1 cut(s) | 205 |
| GluI | GCNGC | 3 cut(s) | 32, 236, 431 |
| HaeIII | GGCC | 2 cut(s) | 120, 713 |
| HapII | CCGG | 2 cut(s) | 230, 593 |
| HgaI | GACGC | 2 cut(s) | 593, 813 |
| HhaI | GCGC | 1 cut(s) | 206 |
| Hin6I | GCGC | 1 cut(s) | 204 |
| HinP1I | GCGC | 1 cut(s) | 204 |
| HinfI | GANTC | 1 cut(s) | 622 |
| HpaII | CCGG | 2 cut(s) | 230, 593 |
| HphI | GGTGA | 1 cut(s) | 98 |
| Hpy166II | GTNNAC | 2 cut(s) | 66, 417 |
| Hpy188I | TCNGA | 6 cut(s) | 130, 327, 473, 706, 829, 836 |
| Hpy188III | TCNNGA | 5 cut(s) | 169, 338, 481, 508, 557 |
| Hpy8I | GTNNAC | 2 cut(s) | 66, 417 |
| HpyAV | CCTTC | 4 cut(s) | 250, 385, 554, 643 |
| HpyCH4III | ACNGT | 6 cut(s) | 86, 216, 334, 388, 414, 440 |
| HpyCH4IV | ACGT | 2 cut(s) | 354, 732 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 235, 518, 522, 629 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 201 |
| HpyF3I | CTNAG | 2 cut(s) | 38, 129 |
| HpySE526I | ACGT | 2 cut(s) | 354, 732 |
| HspAI | GCGC | 1 cut(s) | 204 |
| Ksp22I | TGATCA | 1 cut(s) | 112 |
| Kzo9I | GATC | 5 cut(s) | 112, 151, 487, 510, 553 |
| Lsp1109I | GCAGC | 3 cut(s) | 43, 247, 417 |
| LweI | GCATC | 2 cut(s) | 13, 417 |
| MaeI | CTAG | 1 cut(s) | 246 |
| MaeII | ACGT | 2 cut(s) | 354, 732 |
| MaeIII | GTNAC | 2 cut(s) | 44, 599 |
| MalI | GATC | 5 cut(s) | 114, 153, 489, 512, 555 |
| MbiI | CCGCTC | 2 cut(s) | 195, 688 |
| MboI | GATC | 5 cut(s) | 112, 151, 487, 510, 553 |
| MboII | GAAGA | 5 cut(s) | 340, 440, 532, 693, 767 |
| MflI | RGATCY | 3 cut(s) | 487, 510, 553 |
| MlsI | TGGCCA | 1 cut(s) | 120 |
| MluCI | AATT | 2 cut(s) | 122, 743 |
| MluNI | TGGCCA | 1 cut(s) | 120 |
| MlyI | GAGTC | 1 cut(s) | 616 |
| MmeI | TCCRAC | 3 cut(s) | 171, 179, 322 |
| MnlI | CCTC | 4 cut(s) | 33, 666, 823, 825 |
| Mox20I | TGGCCA | 1 cut(s) | 120 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 520 |
| MscI | TGGCCA | 1 cut(s) | 120 |
| MseI | TTAA | 1 cut(s) | 465 |
| MslI | CAYNNNNRTG | 1 cut(s) | 114 |
| Msp20I | TGGCCA | 1 cut(s) | 120 |
| MspCI | CTTAAG | 1 cut(s) | 464 |
| MspI | CCGG | 2 cut(s) | 230, 593 |
| MspR9I | CCNGG | 1 cut(s) | 230 |
| Mva1269I | GAATGC | 1 cut(s) | 164 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 201 |
| NciI | CCSGG | 1 cut(s) | 230 |
| NdeII | GATC | 5 cut(s) | 112, 151, 487, 510, 553 |
| NmuCI | GTSAC | 1 cut(s) | 599 |
| NsiI | ATGCAT | 2 cut(s) | 6, 520 |
| NspI | RCATGY | 5 cut(s) | 72, 181, 522, 591, 700 |
| PaeI | GCATGC | 1 cut(s) | 522 |
| PagI | TCATGA | 1 cut(s) | 168 |
| PciI | ACATGT | 3 cut(s) | 68, 177, 696 |
| PctI | GAATGC | 1 cut(s) | 164 |
| PkrI | GCNGC | 3 cut(s) | 33, 237, 432 |
| PleI | GAGTC | 1 cut(s) | 616 |
| PpsI | GAGTC | 1 cut(s) | 616 |
| PscI | ACATGT | 3 cut(s) | 68, 177, 696 |
| PshAI | GACNNNNGTC | 1 cut(s) | 588 |
| PspPI | GGNCC | 1 cut(s) | 469 |
| PstI | CTGCAG | 1 cut(s) | 631 |
| PstNI | CAGNNNCTG | 1 cut(s) | 37 |
| PsuI | RGATCY | 3 cut(s) | 487, 510, 553 |
| RsaI | GTAC | 6 cut(s) | 65, 278, 314, 416, 654, 695 |
| RsaNI | GTAC | 6 cut(s) | 64, 277, 313, 415, 653, 694 |
| RseI | CAYNNNNRTG | 1 cut(s) | 114 |
| SaqAI | TTAA | 1 cut(s) | 465 |
| SatI | GCNGC | 3 cut(s) | 32, 236, 431 |
| Sau3AI | GATC | 5 cut(s) | 112, 151, 487, 510, 553 |
| Sau96I | GGNCC | 1 cut(s) | 469 |
| SbfI | CCTGCAGG | 1 cut(s) | 631 |
| SchI | GAGTC | 1 cut(s) | 616 |
| ScrFI | CCNGG | 1 cut(s) | 230 |
| SdaI | CCTGCAGG | 1 cut(s) | 631 |
| SfaNI | GCATC | 2 cut(s) | 13, 417 |
| SfcI | CTRYAG | 2 cut(s) | 410, 627 |
| SinI | GGWCC | 1 cut(s) | 469 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 114 |
| SmlI | CTYRAG | 3 cut(s) | 207, 464, 683 |
| SmoI | CTYRAG | 3 cut(s) | 207, 464, 683 |
| SphI | GCATGC | 1 cut(s) | 522 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 631 |
| Sse9I | AATT | 2 cut(s) | 122, 743 |
| SsiI | CCGC | 2 cut(s) | 195, 688 |
| SspMI | CTAG | 1 cut(s) | 246 |
| StyD4I | CCNGG | 1 cut(s) | 228 |
| StyI | CCWWGG | 1 cut(s) | 571 |
| TaaI | ACNGT | 6 cut(s) | 86, 216, 334, 388, 414, 440 |
| TaiI | ACGT | 2 cut(s) | 357, 735 |
| TaqI | TCGA | 3 cut(s) | 7, 383, 425 |
| TasI | AATT | 2 cut(s) | 122, 743 |
| TatI | WGTACW | 4 cut(s) | 63, 276, 414, 693 |
| Tru1I | TTAA | 1 cut(s) | 465 |
| Tru9I | TTAA | 1 cut(s) | 465 |
| TscAI | CASTG | 3 cut(s) | 265, 424, 610 |
| TseFI | GTSAC | 1 cut(s) | 599 |
| TseI | GCWGC | 3 cut(s) | 31, 235, 430 |
| Tsp45I | GTSAC | 1 cut(s) | 599 |
| TspDTI | ATGAA | 2 cut(s) | 157, 185 |
| TspRI | CASTG | 3 cut(s) | 265, 424, 610 |
| Vha464I | CTTAAG | 1 cut(s) | 464 |
| VpaK11BI | GGWCC | 1 cut(s) | 469 |
| XceI | RCATGY | 5 cut(s) | 72, 181, 522, 591, 700 |
| XspI | CTAG | 1 cut(s) | 246 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 520 |