Transposase-associated domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transpos_assoc | PF13963 | 3 - 77 | 1.8e-15 | Transposase-associated domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 440 |
| AcsI | RAATTY | 1 cut(s) | 255 |
| AfaI | GTAC | 1 cut(s) | 476 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 368, 440 |
| AgsI | TTSAA | 3 cut(s) | 164, 400, 517 |
| AjnI | CCWGG | 2 cut(s) | 433, 477 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 33, 65 |
| AluBI | AGCT | 4 cut(s) | 62, 83, 152, 291 |
| AluI | AGCT | 4 cut(s) | 62, 83, 152, 291 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 83 |
| AoxI | GGCC | 3 cut(s) | 52, 371, 414 |
| ApeKI | GCWGC | 1 cut(s) | 386 |
| ApoI | RAATTY | 1 cut(s) | 255 |
| AspS9I | GGNCC | 2 cut(s) | 371, 415 |
| AsuHPI | GGTGA | 2 cut(s) | 239, 251 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 156, 188 |
| BbsI | GAAGAC | 1 cut(s) | 348 |
| BbvI | GCAGC | 1 cut(s) | 373 |
| BccI | CCATC | 1 cut(s) | 92 |
| BciT130I | CCWGG | 2 cut(s) | 435, 479 |
| BciVI | GTATCC | 1 cut(s) | 441 |
| BfmI | CTRYAG | 2 cut(s) | 153, 173 |
| BfuI | GTATCC | 1 cut(s) | 441 |
| BisI | GCNGC | 1 cut(s) | 387 |
| BlsI | GCNGC | 1 cut(s) | 388 |
| Bme1390I | CCNGG | 2 cut(s) | 435, 479 |
| BmgT120I | GGNCC | 2 cut(s) | 371, 415 |
| BmrFI | CCNGG | 2 cut(s) | 435, 479 |
| BmsI | GCATC | 2 cut(s) | 292, 303 |
| BpiI | GAAGAC | 1 cut(s) | 348 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 368, 440 |
| Bse118I | RCCGGY | 1 cut(s) | 27 |
| Bse3DI | GCAATG | 1 cut(s) | 528 |
| BseBI | CCWGG | 2 cut(s) | 435, 479 |
| BseGI | GGATG | 2 cut(s) | 196, 318 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 368, 440 |
| BseMI | GCAATG | 1 cut(s) | 528 |
| BseRI | GAGGAG | 2 cut(s) | 351, 425 |
| BseXI | GCAGC | 1 cut(s) | 373 |
| BseYI | CCCAGC | 1 cut(s) | 89 |
| BshFI | GGCC | 3 cut(s) | 54, 373, 416 |
| BsiSI | CCGG | 1 cut(s) | 28 |
| BslFI | GGGAC | 1 cut(s) | 230 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 368, 440 |
| BsmFI | GGGAC | 1 cut(s) | 230 |
| BsmI | GAATGC | 1 cut(s) | 523 |
| BsnI | GGCC | 3 cut(s) | 54, 373, 416 |
| Bsp143I | GATC | 2 cut(s) | 146, 166 |
| BspANI | GGCC | 3 cut(s) | 54, 373, 416 |
| BsrDI | GCAATG | 1 cut(s) | 528 |
| BsrFI | RCCGGY | 1 cut(s) | 27 |
| BssAI | RCCGGY | 1 cut(s) | 27 |
| BssMI | GATC | 2 cut(s) | 146, 166 |
| Bst2UI | CCWGG | 2 cut(s) | 435, 479 |
| Bst4CI | ACNGT | 2 cut(s) | 235, 354 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 366 |
| BstF5I | GGATG | 2 cut(s) | 196, 318 |
| BstKTI | GATC | 2 cut(s) | 149, 169 |
| BstMBI | GATC | 2 cut(s) | 146, 166 |
| BstNI | CCWGG | 2 cut(s) | 435, 479 |
| BstSCI | CCNGG | 2 cut(s) | 433, 477 |
| BstSFI | CTRYAG | 2 cut(s) | 153, 173 |
| BstV1I | GCAGC | 1 cut(s) | 373 |
| BstV2I | GAAGAC | 1 cut(s) | 348 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 295 |
| BsuI | GTATCC | 1 cut(s) | 441 |
| BsuRI | GGCC | 3 cut(s) | 54, 373, 416 |
| BtsCI | GGATG | 2 cut(s) | 196, 318 |
| BtsIMutI | CAGTG | 1 cut(s) | 240 |
| CaiI | CAGNNNCTG | 1 cut(s) | 83 |
| Cfr10I | RCCGGY | 1 cut(s) | 27 |
| Cfr13I | GGNCC | 2 cut(s) | 371, 415 |
| CsiI | ACCWGGT | 1 cut(s) | 477 |
| Csp6I | GTAC | 1 cut(s) | 475 |
| CviAII | CATG | 4 cut(s) | 74, 224, 317, 510 |
| CviJI | RGCY | 9 cut(s) | 54, 62, 83, 152, 291, 299, 329, 373, 416 |
| CviKI_1 | RGCY | 9 cut(s) | 54, 62, 83, 152, 291, 299, 329, 373, 416 |
| CviQI | GTAC | 1 cut(s) | 475 |
| DpnI | GATC | 2 cut(s) | 148, 168 |
| DpnII | GATC | 2 cut(s) | 146, 166 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 366 |
| EcoRII | CCWGG | 2 cut(s) | 433, 477 |
| EcoT22I | ATGCAT | 1 cut(s) | 318 |
| FaeI | CATG | 4 cut(s) | 77, 227, 320, 513 |
| FaqI | GGGAC | 1 cut(s) | 230 |
| FatI | CATG | 4 cut(s) | 73, 223, 316, 509 |
| FauNDI | CATATG | 1 cut(s) | 264 |
| Fnu4HI | GCNGC | 1 cut(s) | 387 |
| FokI | GGATG | 2 cut(s) | 203, 325 |
| Fsp4HI | GCNGC | 1 cut(s) | 387 |
| GluI | GCNGC | 1 cut(s) | 387 |
| GsaI | CCCAGC | 1 cut(s) | 93 |
| HaeIII | GGCC | 3 cut(s) | 54, 373, 416 |
| HapII | CCGG | 1 cut(s) | 28 |
| Hin1II | CATG | 4 cut(s) | 77, 227, 320, 513 |
| HincII | GTYRAC | 1 cut(s) | 528 |
| HindII | GTYRAC | 1 cut(s) | 528 |
| HindIII | AAGCTT | 1 cut(s) | 60 |
| HinfI | GANTC | 2 cut(s) | 210, 506 |
| HpaII | CCGG | 1 cut(s) | 28 |
| HphI | GGTGA | 2 cut(s) | 239, 251 |
| Hpy166II | GTNNAC | 1 cut(s) | 528 |
| Hpy188I | TCNGA | 2 cut(s) | 144, 273 |
| Hpy8I | GTNNAC | 1 cut(s) | 528 |
| HpyCH4III | ACNGT | 2 cut(s) | 235, 354 |
| HpyCH4V | TGCA | 4 cut(s) | 25, 77, 316, 521 |
| Hsp92II | CATG | 4 cut(s) | 77, 227, 320, 513 |
| Kzo9I | GATC | 2 cut(s) | 146, 166 |
| LpnPI | CCDG | 9 cut(s) | 41, 75, 199, 301, 348, 420, 447, 464, 491 |
| Lsp1109I | GCAGC | 1 cut(s) | 373 |
| LweI | GCATC | 2 cut(s) | 292, 303 |
| MabI | ACCWGGT | 1 cut(s) | 477 |
| MaeIII | GTNAC | 1 cut(s) | 244 |
| MalI | GATC | 2 cut(s) | 148, 168 |
| MboI | GATC | 2 cut(s) | 146, 166 |
| MboII | GAAGA | 3 cut(s) | 176, 348, 388 |
| MluCI | AATT | 2 cut(s) | 255, 425 |
| MnlI | CCTC | 5 cut(s) | 271, 372, 403, 406, 542 |
| Mph1103I | ATGCAT | 1 cut(s) | 318 |
| MseI | TTAA | 1 cut(s) | 483 |
| MspI | CCGG | 1 cut(s) | 28 |
| MspR9I | CCNGG | 2 cut(s) | 435, 479 |
| Mva1269I | GAATGC | 1 cut(s) | 523 |
| MvaI | CCWGG | 2 cut(s) | 435, 479 |
| NdeI | CATATG | 1 cut(s) | 264 |
| NdeII | GATC | 2 cut(s) | 146, 166 |
| NlaIII | CATG | 4 cut(s) | 77, 227, 320, 513 |
| NsiI | ATGCAT | 1 cut(s) | 318 |
| PctI | GAATGC | 1 cut(s) | 523 |
| PfeI | GAWTC | 2 cut(s) | 210, 506 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 440 |
| PkrI | GCNGC | 1 cut(s) | 388 |
| Psp6I | CCWGG | 2 cut(s) | 433, 477 |
| PspFI | CCCAGC | 1 cut(s) | 89 |
| PspGI | CCWGG | 2 cut(s) | 433, 477 |
| PspPI | GGNCC | 2 cut(s) | 371, 415 |
| PstNI | CAGNNNCTG | 1 cut(s) | 83 |
| RsaI | GTAC | 1 cut(s) | 476 |
| RsaNI | GTAC | 1 cut(s) | 475 |
| SaqAI | TTAA | 1 cut(s) | 483 |
| SatI | GCNGC | 1 cut(s) | 387 |
| Sau3AI | GATC | 2 cut(s) | 146, 166 |
| Sau96I | GGNCC | 2 cut(s) | 371, 415 |
| ScrFI | CCNGG | 2 cut(s) | 435, 479 |
| SetI | ASST | 7 cut(s) | 64, 85, 154, 293, 337, 439, 483 |
| SexAI | ACCWGGT | 1 cut(s) | 477 |
| SfaNI | GCATC | 2 cut(s) | 292, 303 |
| SfcI | CTRYAG | 2 cut(s) | 153, 173 |
| SgrAI | CRCCGGYG | 1 cut(s) | 27 |
| Sse9I | AATT | 2 cut(s) | 255, 425 |
| SspI | AATATT | 1 cut(s) | 44 |
| StyD4I | CCNGG | 2 cut(s) | 433, 477 |
| TaaI | ACNGT | 2 cut(s) | 235, 354 |
| TaqI | TCGA | 1 cut(s) | 408 |
| TasI | AATT | 2 cut(s) | 255, 425 |
| TfiI | GAWTC | 2 cut(s) | 210, 506 |
| Tru1I | TTAA | 1 cut(s) | 483 |
| Tru9I | TTAA | 1 cut(s) | 483 |
| TscAI | CASTG | 1 cut(s) | 240 |
| TseI | GCWGC | 1 cut(s) | 386 |
| TspDTI | ATGAA | 5 cut(s) | 54, 55, 267, 363, 498 |
| TspGWI | ACGGA | 1 cut(s) | 105 |
| TspRI | CASTG | 1 cut(s) | 240 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 440 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 366 |
| XapI | RAATTY | 1 cut(s) | 255 |
| Zsp2I | ATGCAT | 1 cut(s) | 318 |