FvH4_5g06092

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
3595470 .. 3598680
3211 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g06092.t1

Sequence Viewer

Length: 1692 bp
ATGTTTCCTTATGAGAGCGGTGTATGCGCTCAAGGACAGTATATGCCTGACCCGGTGCAGCCCTTCCCCAGAGCTGTCAACACTGCTGGTATTGACAAGTGCAACAAACTGCTTGCTTTACAACAGACCCCTGTGTACCCCGGTTGTCAGAAGACCGTTCTTGAAAGTGTGATGGACGTAATGAAGATTAAAGTTGAGACTAAATCGACTGTGAAAGCTGTTAATGATTATCTACAGTACACTGCTTCGATGCTGCCTCACGGTCATCGTCTTCCTACCACTCATCATAAGGTCCGATGTATCCTGAAAGATCTTGGGCTTTCCTACATCAAGATCCATGCATGCAGATATGACTGCGTTCTCTTTTGGGGTAAAGATCCAGAAGGGAATGACCTTGGTGGCCTTGACGCATGTCCGGTATGTCACACTGACAGATATAAGCTGACTCCTACAGGCAACAGGAAACCTGTAAAGGTACTTCGGTATTTCCCTTTGAGGGATAGAGGTCCGAAATGTGAGGCTCGGGCTCTCCTCCGACGGGTTCAACCCTTTTGGCAACATGAGTCTTCAATACAGTGTATGGCCGGTGATTTTGGTACCGTACAACCTTCCCCATGGATGTGCATGAAGAAGGAATACAATATGTTGAGTTTGTTGATTCCGGGGCCCGGTTATCCGGGGAAGTGTCTCGATGTGTATTTGAGACCTTTGATTGAAGAGCTTAAATTTTTGGGGGACGTTGGTCATCCCACTTATGACAAGTACACGCACGAGATGTTCCAGATGCATGTCATGGTTGTTGGTACCATCAGTGATTTTCCTGCCCGTGGGATGTTGTCGGGCAGCGTTGTTAGGGGATACAAGGCTTGTCCAGAGTGCCTTAGCGATGAGAGGAGCAGCAGTCATTGCAACAAGATATGCAGATTGGGTCACCGTGCTTTCCTTCCAGATAATCACGAATGGCTGTTCGATGACAAGGCATTTGATGGGACCGTAGAACACGGTGTGCTTCCCAGAAGATGGACGGGGGAAGAAATTTTAGCAGTGCTTAATGAGTACGATTTTGGGCAGCTCAGCAATCATCCCAACATTGTGGCGGTAATACCTGAAAGACCCGACAGGTACAAATTCTGGACACATAAGAGCATATTCTGGGAACTCCCATACTGGATGGTGGAACTCGTTTATGGGCAAGGCATGACAGTGCACCTCTTCAAGTGTAGATGGTTTGATACTAGGCCGCAGAGCATGAAGACCGATCAGTACGGAATATTATCGGTGAACACTGCTACAAGTTCTTACGAAGATGACCCGTTCGTTTTTGCCACATCGGTAAAACAAGTGTTTTATCTTGATGACCTTGCTAAGGGTGACGCGTGGAAAGTAGTCAACCTTGTGCATCCTCGAAACATTTACCGGGCGGCTACACTTGGAGAGGCCGAAGACGAGGAAGAGGATGTTGCGTATCAAGAGTCCAACGCAATAGGTATTCCTAACTCCTCTACCGTTCGCCTTAATAATTTTAAAGCGGGTCGTTCGGTGCGAATTCGTGATGAAGAGCCAAGGCTTATTGATGTTGATCCAAATCAAGAAACAGACGAAGACTCTGACGATGAGGAAAGACATATATTACCAGAAATTAATTCTGACACCGAAGAAGACTCATCGGATGATTCCGATTACGAGCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

564

Amino Acids

64.32

Weight (kDa)

5.54

Isoelectric Point (pI)

48.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_21 PF02992 204 - 351 7.7e-48 Transposase family tnp2
DUF4216 PF13952 393 - 463 5.4e-20 Domain of unknown function (DUF4216)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000015)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02311 FvH4_1g13961 FvH4_1g22120 FvH4_1g22121 FvH4_1g22122 FvH4_1g23803 FvH4_1g23921 FvH4_1g28422 FvH4_1g29232 FvH4_1g29711 FvH4_1g29805 FvH4_1g29806 FvH4_2g00032 FvH4_2g00812 FvH4_2g02271 FvH4_2g02272 FvH4_2g02785 FvH4_2g04944 FvH4_2g04945 FvH4_2g07143 FvH4_2g07144 FvH4_2g07753 FvH4_2g07991 FvH4_2g08941 FvH4_2g11271 FvH4_2g13851 FvH4_2g14771 FvH4_2g19023 FvH4_2g20441 FvH4_2g21542 FvH4_3g14320 FvH4_3g16301 FvH4_3g16302 FvH4_3g18963 FvH4_3g21083 FvH4_3g21361 FvH4_3g22001 FvH4_3g22111 FvH4_3g22562 FvH4_3g23523 FvH4_3g25312 FvH4_3g26061 FvH4_3g29331 FvH4_3g29831 FvH4_3g30391 FvH4_3g30443 FvH4_3g30614 FvH4_3g31714 FvH4_3g31743 FvH4_3g32192 FvH4_3g32261 FvH4_3g32804 FvH4_3g33044 FvH4_3g33045 FvH4_3g33093 FvH4_3g36581 FvH4_3g36582 FvH4_3g41971 FvH4_4g03322 FvH4_4g04242 FvH4_4g05702 FvH4_4g08648 FvH4_4g09213 FvH4_4g10051 FvH4_4g10253 FvH4_4g10471 FvH4_4g12773 FvH4_4g13831 FvH4_4g13832 FvH4_4g13891 FvH4_4g14282 FvH4_4g14283 FvH4_4g14443 FvH4_4g14562 FvH4_4g14563 FvH4_4g15322 FvH4_4g16172 FvH4_4g16174 FvH4_4g19121 FvH4_4g25941 FvH4_5g03061 FvH4_5g06092 FvH4_5g08081 FvH4_5g08082 FvH4_5g18422 FvH4_5g18423 FvH4_5g19272 FvH4_5g19471 FvH4_5g21221 FvH4_5g24272 FvH4_5g26171 FvH4_5g30952 FvH4_5g31512 FvH4_5g31513 FvH4_5g35083 FvH4_5g35211 FvH4_5g37211 FvH4_5g37212 FvH4_6g06671 FvH4_6g13841 FvH4_6g17381 FvH4_6g20142 FvH4_6g21813 FvH4_6g21900 FvH4_6g22901 FvH4_6g23254 FvH4_6g23352 FvH4_6g23592 FvH4_6g28112 FvH4_6g30093 FvH4_6g30771 FvH4_6g30772 FvH4_6g31292 FvH4_6g31483 FvH4_6g33071 FvH4_6g33481 FvH4_6g34821 FvH4_6g37043 FvH4_6g39685 FvH4_6g40311 FvH4_6g43082 FvH4_7g00291 FvH4_7g01731 FvH4_7g02153 FvH4_7g02991 FvH4_7g06091 FvH4_7g06092 FvH4_7g07224 FvH4_7g07901 FvH4_7g10641 FvH4_7g13281 FvH4_7g16902 FvH4_7g17991 FvH4_c18g00010
malus_domestica MD03G1146400.v1.1 MD12G1219800.v1.1
prunus_persica Prupe.6G012900_v2.0.a1 Prupe.6G136200_v2.0.a1
pyrus_communis pycom02g17950 pycom03g09510 pycom05g02880 pycom07g13380 pycom07g21950 pycom10g11450 pycom10g11460 pycom10g12890 pycom11g15000 pycom12646g00130 pycom13g21890 pycom17g19360
rosa_chinensis RchiOBHm_Chr1g0321891 RchiOBHm_Chr1g0321901 RchiOBHm_Chr1g0331761 RchiOBHm_Chr2g0084301 RchiOBHm_Chr2g0095191 RchiOBHm_Chr2g0111791 RchiOBHm_Chr2g0114991 RchiOBHm_Chr2g0127551 RchiOBHm_Chr2g0129601 RchiOBHm_Chr2g0133591 RchiOBHm_Chr2g0136601 RchiOBHm_Chr2g0143321 RchiOBHm_Chr3g0458241 RchiOBHm_Chr3g0483841 RchiOBHm_Chr3g0483851 RchiOBHm_Chr3g0495641 RchiOBHm_Chr4g0408001 RchiOBHm_Chr4g0414211 RchiOBHm_Chr4g0414221 RchiOBHm_Chr4g0415141 RchiOBHm_Chr4g0417061 RchiOBHm_Chr4g0421351 RchiOBHm_Chr4g0433621 RchiOBHm_Chr4g0436001 RchiOBHm_Chr5g0007671 RchiOBHm_Chr5g0020851 RchiOBHm_Chr5g0024741 RchiOBHm_Chr5g0040541 RchiOBHm_Chr5g0064651 RchiOBHm_Chr5g0064781 RchiOBHm_Chr5g0066161 RchiOBHm_Chr5g0067601 RchiOBHm_Chr5g0067611 RchiOBHm_Chr6g0264621 RchiOBHm_Chr6g0271091 RchiOBHm_Chr6g0274521 RchiOBHm_Chr6g0278261 RchiOBHm_Chr7g0184931 RchiOBHm_Chr7g0231571
rosa_laevigata RLG00000008333 RLG00000022575 RLG00000022597 RLG00000031744 RLG00000035085
rosa_multiflora Rmu_co7992550.1_g000001 Rmu_co8010316.1_g000001 Rmu_co8034468.1_g000001 Rmu_co8035868.1_g000001 Rmu_co8070070.1_g000001 Rmu_co8090484.1_g000001 Rmu_co8168904.1_g000001 Rmu_co8187196.1_g000001 Rmu_co8207388.1_g000001 Rmu_co8212806.1_g000001 Rmu_co8240057.1_g000001 Rmu_co8245773.1_g000001 Rmu_co8271583.1_g000001 Rmu_co8319165.1_g000001 Rmu_co8330561.1_g000001 Rmu_co8359235.1_g000001 Rmu_co8362839.1_g000001 Rmu_co8373057.1_g000002 Rmu_co8378597.1_g000001 Rmu_co8400477.1_g000001 Rmu_co8435579.1_g000001 Rmu_sc0000015.1_g000028 Rmu_sc0000055.1_g000001 Rmu_sc0000083.1_g000002 Rmu_sc0000104.1_g000020 Rmu_sc0000105.1_g000010 Rmu_sc0000110.1_g000008 Rmu_sc0000162.1_g000002 Rmu_sc0000353.1_g000016 Rmu_sc0000365.1_g000093 Rmu_sc0000366.1_g000007 Rmu_sc0000509.1_g000004 Rmu_sc0000509.1_g000005 Rmu_sc0000525.1_g000001 Rmu_sc0000565.1_g000038 Rmu_sc0000579.1_g000015 Rmu_sc0000607.1_g000020 Rmu_sc0000623.1_g000006 Rmu_sc0000633.1_g000013 Rmu_sc0000633.1_g000014 Rmu_sc0000690.1_g000050 Rmu_sc0000721.1_g000014 Rmu_sc0000741.1_g000010 Rmu_sc0000741.1_g000015 Rmu_sc0000811.1_g000020 Rmu_sc0000813.1_g000016 Rmu_sc0000814.1_g000011 Rmu_sc0000834.1_g000015 Rmu_sc0000834.1_g000016 Rmu_sc0000868.1_g000001 Rmu_sc0000924.1_g000049 Rmu_sc0000924.1_g000050 Rmu_sc0000928.1_g000031 Rmu_sc0001035.1_g000026 Rmu_sc0001053.1_g000010 Rmu_sc0001063.1_g000011 Rmu_sc0001065.1_g000002 Rmu_sc0001155.1_g000010 Rmu_sc0001192.1_g000004 Rmu_sc0001206.1_g000014 Rmu_sc0001206.1_g000019 Rmu_sc0001211.1_g000079 Rmu_sc0001238.1_g000040 Rmu_sc0001238.1_g000041 Rmu_sc0001248.1_g000007 Rmu_sc0001250.1_g000004 Rmu_sc0001250.1_g000006 Rmu_sc0001293.1_g000019 Rmu_sc0001309.1_g000013 Rmu_sc0001428.1_g000021 Rmu_sc0001428.1_g000022 Rmu_sc0001433.1_g000010 Rmu_sc0001441.1_g000004 Rmu_sc0001441.1_g000005 Rmu_sc0001461.1_g000091 Rmu_sc0001516.1_g000082 Rmu_sc0001580.1_g000018 Rmu_sc0001626.1_g000028 Rmu_sc0001698.1_g000022 Rmu_sc0001698.1_g000024 Rmu_sc0001782.1_g000030 Rmu_sc0001782.1_g000032 Rmu_sc0001849.1_g000047 Rmu_sc0001851.1_g000010 Rmu_sc0001856.1_g000001 Rmu_sc0001891.1_g000004 Rmu_sc0001904.1_g000035 Rmu_sc0001909.1_g000001 Rmu_sc0001916.1_g000013 Rmu_sc0001997.1_g000005 Rmu_sc0002070.1_g000039 Rmu_sc0002144.1_g000034 Rmu_sc0002212.1_g000013 Rmu_sc0002231.1_g000013 Rmu_sc0002232.1_g000008 Rmu_sc0002244.1_g000022 Rmu_sc0002251.1_g000007 Rmu_sc0002253.1_g000011 Rmu_sc0002323.1_g000006 Rmu_sc0002337.1_g000009 Rmu_sc0002451.1_g000025 Rmu_sc0002451.1_g000041 Rmu_sc0002460.1_g000026 Rmu_sc0002472.1_g000020 Rmu_sc0002669.1_g000074 Rmu_sc0002695.1_g000001 Rmu_sc0002695.1_g000003 Rmu_sc0002764.1_g000030 Rmu_sc0002786.1_g000001 Rmu_sc0002824.1_g000028 Rmu_sc0002847.1_g000008 Rmu_sc0002847.1_g000009 Rmu_sc0002986.1_g000061 Rmu_sc0002986.1_g000067 Rmu_sc0002986.1_g000068 Rmu_sc0002988.1_g000011 Rmu_sc0003110.1_g000022 Rmu_sc0003413.1_g000054 Rmu_sc0003413.1_g000058 Rmu_sc0003454.1_g000014 Rmu_sc0003454.1_g000016 Rmu_sc0003465.1_g000038 Rmu_sc0003465.1_g000040 Rmu_sc0003505.1_g000005 Rmu_sc0003505.1_g000028 Rmu_sc0003670.1_g000001 Rmu_sc0003692.1_g000034 Rmu_sc0003840.1_g000015 Rmu_sc0003862.1_g000015 Rmu_sc0003892.1_g000010 Rmu_sc0003981.1_g000014 Rmu_sc0004003.1_g000008 Rmu_sc0004031.1_g000005 Rmu_sc0004074.1_g000001 Rmu_sc0004135.1_g000010 Rmu_sc0004344.1_g000010 Rmu_sc0004344.1_g000011 Rmu_sc0004344.1_g000012 Rmu_sc0004392.1_g000010 Rmu_sc0004424.1_g000011 Rmu_sc0004502.1_g000024 Rmu_sc0004569.1_g000005 Rmu_sc0004602.1_g000056 Rmu_sc0004622.1_g000015 Rmu_sc0004798.1_g000018 Rmu_sc0004811.1_g000014 Rmu_sc0004842.1_g000001 Rmu_sc0004990.1_g000021 Rmu_sc0005023.1_g000029 Rmu_sc0005072.1_g000015 Rmu_sc0005449.1_g000001 Rmu_sc0005654.1_g000010 Rmu_sc0005676.1_g000008 Rmu_sc0005685.1_g000026 Rmu_sc0005913.1_g000020 Rmu_sc0005947.1_g000004 Rmu_sc0006420.1_g000020 Rmu_sc0006450.1_g000003 Rmu_sc0006532.1_g000001 Rmu_sc0006558.1_g000001 Rmu_sc0006583.1_g000017 Rmu_sc0006669.1_g000002 Rmu_sc0006739.1_g000003 Rmu_sc0006746.1_g000012 Rmu_sc0006803.1_g000019 Rmu_sc0006888.1_g000056 Rmu_sc0007341.1_g000014 Rmu_sc0007341.1_g000015 Rmu_sc0007435.1_g000001 Rmu_sc0007486.1_g000005 Rmu_sc0007686.1_g000006 Rmu_sc0007876.1_g000006 Rmu_sc0007888.1_g000006 Rmu_sc0008079.1_g000008 Rmu_sc0008440.1_g000006 Rmu_sc0008633.1_g000007 Rmu_sc0009546.1_g000002 Rmu_sc0010357.1_g000007 Rmu_sc0010385.1_g000003 Rmu_sc0010543.1_g000011 Rmu_sc0011563.1_g000001 Rmu_sc0012228.1_g000002 Rmu_sc0012491.1_g000001 Rmu_sc0012650.1_g000001 Rmu_sc0013205.1_g000006 Rmu_sc0013216.1_g000003 Rmu_sc0014191.1_g000001 Rmu_sc0014895.1_g000001 Rmu_sc0014957.1_g000001 Rmu_sc0015243.1_g000001 Rmu_sc0015746.1_g000001 Rmu_sc0017392.1_g000001 Rmu_sc0018470.1_g000001 Rmu_sc0018623.1_g000006 Rmu_sc0021556.1_g000004 Rmu_sc0022401.1_g000001 Rmu_sc0024611.1_g000001 Rmu_sc0024953.1_g000001 Rmu_sc0025466.1_g000001 Rmu_sc0025892.1_g000001 Rmu_sc0025909.1_g000001 Rmu_sc0026281.1_g000001 Rmu_sc0027327.1_g000001 Rmu_sc0028428.1_g000001 Rmu_sc0029754.1_g000001 Rmu_sc0032120.1_g000001 Rmu_sc0039702.1_g000001 Rmu_ssc0000089.1_g000022 Rmu_ssc0000150.1_g000006 Rmu_ssc0000150.1_g000007 Rmu_ssc0000231.1_g000010 Rmu_ssc0000233.1_g000059 Rmu_ssc0000233.1_g000061
rosa_roxburghii Rroxscaffold_1G00002110 Rroxscaffold_1G00003320 Rroxscaffold_1G00012840 Rroxscaffold_1G00013850 Rroxscaffold_1G00023980 Rroxscaffold_1G00029750 Rroxscaffold_1G00033890 Rroxscaffold_1G00042470 Rroxscaffold_1G00053360 Rroxscaffold_1G00054060 Rroxscaffold_2G00076150 Rroxscaffold_2G00089750 Rroxscaffold_2G00152600 Rroxscaffold_4G00299540 Rroxscaffold_4G00320960 Rroxscaffold_5G00338640 Rroxscaffold_5G00376300 Rroxscaffold_5G00377680 Rroxscaffold_6G00394120 Rroxscaffold_7G00213820 Rroxscaffold_7G00215950 Rroxscaffold_7G00217790
rosa_rugosa Rorug01G0075300 Rorug01G0094600 Rorug01G0094600 Rorug01G0101800.1 Rorug01G0309500 Rorug02G0256300 Rorug02G0465700 Rorug04G0045200 Rorug04G0091000 Rorug04G0091100 Rorug04G0091300 Rorug04G0178200 Rorug04G0450400 Rorug05G0144200 Rorug07G0202400 Rorug07G0326300
rosa_samantha Rh1AG266500 Rh1AG296100 Rh1AG408600 Rh1BG257900 Rh1BG392900 Rh1BG393000 Rh1CG125400 Rh1CG149300 Rh1CG405500 Rh1DG423700 Rh1DG423800 Rh2AG369400 Rh2BG234000 Rh2BG334600 Rh2CG157900 Rh2CG232800 Rh3AG146000 Rh3AG161400 Rh3AG217200 Rh3AG329700 Rh3CG223900 Rh3CG320600 Rh3DG258400 Rh4AG105000 Rh4AG340300 Rh4BG026600 Rh4BG138500 Rh4CG113500 Rh4CG322400 Rh4DG203100 Rh5AG169100 Rh5AG372400 Rh5AG440400 Rh5BG194300 Rh5CG228700 Rh5CG263400 Rh5CG272000 Rh5CG579400 Rh5DG175100 Rh5DG472600 Rh5DG493400 Rh6AG418900 Rh6CG192400 Rh6CG450200 Rh6DG127600 Rh6DG193500 Rh6DG294100 Rh6DG320400 Rh6DG349400 Rh7AG364800 Rh7AG443300 Rh7DG198300 Rh7DG346300
rosa_wichuraiana Rw0G003660 Rw0G004330 Rw0G020060 Rw0G020860 Rw0G021260 Rw1G001000 Rw1G001470 Rw1G001810 Rw1G005640 Rw1G006320 Rw1G010590 Rw1G013140 Rw1G016260 Rw1G016270 Rw1G016320 Rw1G017680 Rw1G019120 Rw1G021470 Rw1G027240 Rw1G028020 Rw1G030070 Rw2G003580 Rw2G007770 Rw2G012130 Rw2G012300 Rw2G013070 Rw2G014700 Rw2G017960 Rw2G028780 Rw2G034790 Rw2G035470 Rw2G036310 Rw2G039430 Rw2G040550 Rw2G042560 Rw3G005710 Rw3G010390 Rw3G012630 Rw3G015510 Rw3G016130 Rw3G020240 Rw3G020760 Rw3G021500 Rw3G023220 Rw3G026440 Rw3G026960 Rw3G029080 Rw3G029250 Rw4G001900 Rw4G004890 Rw4G005770 Rw4G006470 Rw4G008100 Rw4G009360 Rw4G009770 Rw4G014530 Rw4G015370 Rw4G023120 Rw5G002130 Rw5G006640 Rw5G014680 Rw5G015180 Rw5G016210 Rw5G019940 Rw5G026100 Rw5G029870 Rw5G034430 Rw5G035890 Rw5G041340 Rw5G048760 Rw5G048770 Rw6G004170 Rw6G007540 Rw6G007600 Rw6G009420 Rw6G010000 Rw6G020720 Rw6G022860 Rw7G007400 Rw7G007860 Rw7G027180 Rw7G032110 Rw7G033090 Rw7G034980 Rw7G036100 Rw7G036480 Rw7G036550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 596, 803
AccB1I GGYRCC 2 cut(s) 596, 803
AccB7I CCANNNNNTGG 1 cut(s) 1020
AccBSI CCGCTC 1 cut(s) 18
AccII CGCG 1 cut(s) 1376
AciI CCGC 5 cut(s) 18, 1097, 1241, 1421, 1529
AclWI GGATC 3 cut(s) 328, 371, 1574
AcoI YGGCCR 1 cut(s) 582
AcsI RAATTY 4 cut(s) 725, 1035, 1127, 1545
AdeI CACNNNGTG 1 cut(s) 1006
AfiI CCNNNNNNNGG 6 cut(s) 496, 538, 668, 827, 1020, 1366
AflIII ACRYGT 1 cut(s) 1374
AgsI TTSAA 5 cut(s) 164, 545, 570, 716, 1216
AluBI AGCT 5 cut(s) 74, 218, 442, 721, 1072
AluI AGCT 5 cut(s) 74, 218, 442, 721, 1072
Alw21I GWGCWC 1 cut(s) 1209
Alw26I GTCTC 3 cut(s) 191, 692, 697
Alw44I GTGCAC 1 cut(s) 1205
AlwI GGATC 3 cut(s) 328, 371, 1574
Ama87I CYCGRG 1 cut(s) 522
AoxI GGCC 5 cut(s) 400, 582, 665, 1238, 1437
ApaI GGGCCC 1 cut(s) 669
ApaLI GTGCAC 1 cut(s) 1205
ApeKI GCWGC 5 cut(s) 58, 253, 843, 897, 1069
ApoI RAATTY 4 cut(s) 725, 1035, 1127, 1545
ArsI GACNNNNNNTTYG 2 cut(s) 965, 997
AseI ATTAAT 1 cut(s) 1641
Asp718I GGTACC 2 cut(s) 596, 803
AspLEI GCGC 1 cut(s) 29
AspS9I GGNCC 5 cut(s) 292, 506, 665, 666, 990
AsuC2I CCSGG 6 cut(s) 53, 141, 663, 669, 678, 1418
AsuHPI GGTGA 4 cut(s) 599, 923, 1291, 1382
AvaI CYCGRG 1 cut(s) 522
AvaII GGWCC 3 cut(s) 292, 506, 990
BaeGI GKGCMC 2 cut(s) 669, 1209
BaeI ACNNNNGTAYC 2 cut(s) 467, 500
BanI GGYRCC 2 cut(s) 596, 803
BanII GRGCYC 2 cut(s) 529, 669
BarI GAAGNNNNNNTAC 4 cut(s) 462, 494, 620, 652
BauI CACGAG 1 cut(s) 770
BbsI GAAGAC 7 cut(s) 158, 263, 558, 1259, 1449, 1608, 1665
Bbv12I GWGCWC 1 cut(s) 1209
BbvI GCAGC 5 cut(s) 70, 240, 855, 909, 1081
BccI CCATC 6 cut(s) 166, 815, 980, 1014, 1165, 1218
BciVI GTATCC 2 cut(s) 311, 851
BcnI CCSGG 6 cut(s) 53, 141, 663, 669, 678, 1418
BcoDI GTCTC 3 cut(s) 191, 692, 697
BfaI CTAG 1 cut(s) 1236
BfmI CTRYAG 2 cut(s) 233, 450
BfuI GTATCC 2 cut(s) 311, 851
BglII AGATCT 1 cut(s) 310
BisI GCNGC 7 cut(s) 59, 254, 844, 898, 1070, 1241, 1422
BlpI GCTNAGC 1 cut(s) 1073
BlsI GCNGC 7 cut(s) 60, 255, 845, 899, 1071, 1242, 1423
Bme1390I CCNGG 6 cut(s) 53, 141, 663, 669, 678, 1418
Bme18I GGWCC 3 cut(s) 292, 506, 990
BmeT110I CYCGRG 1 cut(s) 522
BmgT120I GGNCC 5 cut(s) 292, 506, 665, 666, 990
BmiI GGNNCC 5 cut(s) 598, 666, 667, 805, 991
BmrFI CCNGG 6 cut(s) 53, 141, 663, 669, 678, 1418
BmsI GCATC 3 cut(s) 240, 774, 1408
BoxI GACNNNNGTC 2 cut(s) 411, 741
BpiI GAAGAC 7 cut(s) 158, 263, 558, 1259, 1449, 1608, 1665
Bpu10I CCTNAGC 2 cut(s) 881, 1365
Bpu1102I GCTNAGC 1 cut(s) 1073
BpuEI CTTGAG 1 cut(s) 15
BpuMI CCSGG 6 cut(s) 53, 141, 663, 669, 678, 1418
BsaBI GATNNNNATC 2 cut(s) 1578, 1584
BsaI GGTCTC 1 cut(s) 697
BsaJI CCNNGG 7 cut(s) 139, 394, 614, 662, 677, 826, 1562
BsaWI WCCGGW 1 cut(s) 415
BsaXI ACNNNNNCTCC 2 cut(s) 886, 916
Bsc4I CCNNNNNNNGG 6 cut(s) 496, 538, 668, 827, 1020, 1366
Bse118I RCCGGY 1 cut(s) 584
Bse1I ACTGG 1 cut(s) 1172
Bse3DI GCAATG 1 cut(s) 904
Bse8I GATNNNNATC 2 cut(s) 1578, 1584
BseDI CCNNGG 7 cut(s) 139, 394, 614, 662, 677, 826, 1562
BseGI GGATG 8 cut(s) 624, 745, 837, 1081, 1176, 1399, 1462, 1675
BseJI GATNNNNATC 2 cut(s) 1578, 1584
BseLI CCNNNNNNNGG 6 cut(s) 496, 538, 668, 827, 1020, 1366
BseMI GCAATG 1 cut(s) 904
BseMII CTCAG 1 cut(s) 1087
BseNI ACTGG 1 cut(s) 1172
BseRI GAGGAG 3 cut(s) 521, 907, 1489
BseSI GKGCMC 2 cut(s) 669, 1209
BseXI GCAGC 5 cut(s) 70, 240, 855, 909, 1081
BsgI GTGCAG 1 cut(s) 77
Bsh1236I CGCG 1 cut(s) 1376
BshFI GGCC 5 cut(s) 402, 584, 667, 1240, 1439
BshNI GGYRCC 2 cut(s) 596, 803
BsiHKAI GWGCWC 1 cut(s) 1209
BsiHKCI CYCGRG 1 cut(s) 522
BsiSI CCGG 8 cut(s) 53, 141, 416, 585, 662, 669, 677, 1417
BslFI GGGAC 2 cut(s) 749, 1003
BslI CCNNNNNNNGG 6 cut(s) 496, 538, 668, 827, 1020, 1366
BsmAI GTCTC 3 cut(s) 191, 692, 697
BsmFI GGGAC 2 cut(s) 749, 1003
BsnI GGCC 5 cut(s) 402, 584, 667, 1240, 1439
Bso31I GGTCTC 1 cut(s) 697
BsoBI CYCGRG 1 cut(s) 522
Bsp120I GGGCCC 1 cut(s) 665
Bsp1286I GDGCHC 3 cut(s) 529, 669, 1209
Bsp143I GATC 5 cut(s) 310, 333, 376, 1258, 1579
Bsp1720I GCTNAGC 1 cut(s) 1073
Bsp19I CCATGG 1 cut(s) 614
BspACI CCGC 5 cut(s) 18, 1097, 1241, 1421, 1529
BspANI GGCC 5 cut(s) 402, 584, 667, 1240, 1439
BspCNI CTCAG 1 cut(s) 1086
BspFNI CGCG 1 cut(s) 1376
BspLI GGNNCC 5 cut(s) 598, 666, 667, 805, 991
BspPI GGATC 3 cut(s) 328, 371, 1574
BspQI GCTCTTC 2 cut(s) 711, 1551
BspT107I GGYRCC 2 cut(s) 596, 803
BspTNI GGTCTC 1 cut(s) 697
BsrBI CCGCTC 1 cut(s) 18
BsrDI GCAATG 1 cut(s) 904
BsrFI RCCGGY 1 cut(s) 584
BsrI ACTGG 1 cut(s) 1172
BssAI RCCGGY 1 cut(s) 584
BssECI CCNNGG 7 cut(s) 139, 394, 614, 662, 677, 826, 1562
BssMI GATC 5 cut(s) 310, 333, 376, 1258, 1579
BssSI CACGAG 1 cut(s) 770
BssT1I CCWWGG 3 cut(s) 394, 614, 1562
Bst2BI CACGAG 1 cut(s) 770
Bst6I CTCTTC 4 cut(s) 711, 1217, 1446, 1551
BstAPI GCANNNNNTGC 1 cut(s) 906
BstC8I GCNNGC 2 cut(s) 114, 343
BstDEI CTNAG 4 cut(s) 881, 1073, 1365, 1689
BstDSI CCRYGG 2 cut(s) 614, 826
BstEII GGTNACC 1 cut(s) 929
BstENI CCTNNNNNAGG 1 cut(s) 1364
BstF5I GGATG 8 cut(s) 624, 745, 837, 1081, 1176, 1399, 1462, 1675
BstFNI CGCG 1 cut(s) 1376
BstHHI GCGC 1 cut(s) 29
BstKTI GATC 5 cut(s) 313, 336, 379, 1261, 1582
BstMAI GTCTC 3 cut(s) 191, 692, 697
BstMBI GATC 5 cut(s) 310, 333, 376, 1258, 1579
BstMWI GCNNNNNNNGC 2 cut(s) 24, 906
BstNSI RCATGY 3 cut(s) 345, 414, 791
BstPAI GACNNNNGTC 2 cut(s) 411, 741
BstPI GGTNACC 1 cut(s) 929
BstSCI CCNGG 6 cut(s) 51, 139, 661, 667, 676, 1416
BstSFI CTRYAG 2 cut(s) 233, 450
BstSLI GKGCMC 2 cut(s) 669, 1209
BstUI CGCG 1 cut(s) 1376
BstV1I GCAGC 5 cut(s) 70, 240, 855, 909, 1081
BstV2I GAAGAC 7 cut(s) 158, 263, 558, 1259, 1449, 1608, 1665
BstX2I RGATCY 3 cut(s) 310, 333, 376
BstXI CCANNNNNNTGG 1 cut(s) 1093
BstYI RGATCY 3 cut(s) 310, 333, 376
BsuI GTATCC 2 cut(s) 311, 851
BsuRI GGCC 5 cut(s) 402, 584, 667, 1240, 1439
BtgI CCRYGG 2 cut(s) 614, 826
BtgZI GCGATG 1 cut(s) 900
BtsCI GGATG 8 cut(s) 624, 745, 837, 1081, 1176, 1399, 1462, 1675
BtsI GCAGTG 4 cut(s) 81, 240, 1050, 1284
BtsIMutI CAGTG 8 cut(s) 81, 240, 426, 581, 817, 1050, 1209, 1284
Cac8I GCNNGC 2 cut(s) 114, 343
CfoI GCGC 1 cut(s) 29
Cfr10I RCCGGY 1 cut(s) 584
Cfr13I GGNCC 5 cut(s) 292, 506, 665, 666, 990
CseI GACGC 2 cut(s) 416, 1382
DdeI CTNAG 4 cut(s) 881, 1073, 1365, 1689
DpnI GATC 5 cut(s) 312, 335, 378, 1260, 1581
DpnII GATC 5 cut(s) 310, 333, 376, 1258, 1579
DraI TTTAAA 1 cut(s) 1525
DraIII CACNNNGTG 1 cut(s) 1006
EaeI YGGCCR 1 cut(s) 582
Eam1104I CTCTTC 4 cut(s) 711, 1217, 1446, 1551
EarI CTCTTC 4 cut(s) 711, 1217, 1446, 1551
Eco130I CCWWGG 3 cut(s) 394, 614, 1562
Eco24I GRGCYC 2 cut(s) 529, 669
Eco31I GGTCTC 1 cut(s) 697
Eco47I GGWCC 3 cut(s) 292, 506, 990
Eco88I CYCGRG 1 cut(s) 522
Eco91I GGTNACC 1 cut(s) 929
EcoNI CCTNNNNNAGG 1 cut(s) 1364
EcoO109I RGGNCCY 1 cut(s) 665
EcoO65I GGTNACC 1 cut(s) 929
EcoRI GAATTC 1 cut(s) 1545
EcoT14I CCWWGG 3 cut(s) 394, 614, 1562
EcoT22I ATGCAT 2 cut(s) 343, 789
EcoT38I GRGCYC 2 cut(s) 529, 669
ErhI CCWWGG 3 cut(s) 394, 614, 1562
FaqI GGGAC 2 cut(s) 749, 1003
FauI CCCGC 1 cut(s) 1522
Fnu4HI GCNGC 7 cut(s) 59, 254, 844, 898, 1070, 1241, 1422
FokI GGATG 8 cut(s) 631, 732, 844, 1068, 1183, 1386, 1469, 1682
FriOI GRGCYC 2 cut(s) 529, 669
Fsp4HI GCNGC 7 cut(s) 59, 254, 844, 898, 1070, 1241, 1422
FspBI CTAG 1 cut(s) 1236
GlaI GCGC 1 cut(s) 28
GluI GCNGC 7 cut(s) 59, 254, 844, 898, 1070, 1241, 1422
HaeIII GGCC 5 cut(s) 402, 584, 667, 1240, 1439
HapII CCGG 8 cut(s) 53, 141, 416, 585, 662, 669, 677, 1417
HgaI GACGC 2 cut(s) 416, 1382
HhaI GCGC 1 cut(s) 29
Hin6I GCGC 1 cut(s) 27
HinP1I GCGC 1 cut(s) 27
HincII GTYRAC 2 cut(s) 79, 1390
HindII GTYRAC 2 cut(s) 79, 1390
HinfI GANTC 7 cut(s) 445, 563, 658, 1472, 1604, 1661, 1673
HpaII CCGG 8 cut(s) 53, 141, 416, 585, 662, 669, 677, 1417
HphI GGTGA 4 cut(s) 599, 923, 1291, 1382
Hpy166II GTNNAC 7 cut(s) 79, 136, 240, 765, 1207, 1282, 1390
Hpy188I TCNGA 8 cut(s) 150, 296, 510, 536, 1609, 1648, 1669, 1678
Hpy8I GTNNAC 7 cut(s) 79, 136, 240, 765, 1207, 1282, 1390
Hpy99I CGWCG 1 cut(s) 540
HpyAV CCTTC 5 cut(s) 73, 377, 618, 625, 953
HpyCH4IV ACGT 2 cut(s) 177, 738
HpyF10VI GCNNNNNNNGC 2 cut(s) 24, 906
HpyF3I CTNAG 4 cut(s) 881, 1073, 1365, 1689
HpySE526I ACGT 2 cut(s) 177, 738
HspAI GCGC 1 cut(s) 27
KpnI GGTACC 2 cut(s) 600, 807
Kzo9I GATC 5 cut(s) 310, 333, 376, 1258, 1579
LguI GCTCTTC 2 cut(s) 711, 1551
LmnI GCTCC 1 cut(s) 894
Lsp1109I GCAGC 5 cut(s) 70, 240, 855, 909, 1081
LweI GCATC 3 cut(s) 240, 774, 1408
MaeI CTAG 1 cut(s) 1236
MaeII ACGT 2 cut(s) 177, 738
MaeIII GTNAC 3 cut(s) 422, 929, 1370
MalI GATC 5 cut(s) 312, 335, 378, 1260, 1581
MbiI CCGCTC 1 cut(s) 18
MboI GATC 5 cut(s) 310, 333, 376, 1258, 1579
MflI RGATCY 3 cut(s) 310, 333, 376
MhlI GDGCHC 3 cut(s) 529, 669, 1209
MluCI AATT 7 cut(s) 725, 1035, 1127, 1519, 1545, 1638, 1642
MluI ACGCGT 1 cut(s) 1374
MlyI GAGTC 5 cut(s) 439, 572, 1481, 1598, 1655
MmeI TCCRAC 2 cut(s) 559, 1500
Mph1103I ATGCAT 2 cut(s) 343, 789
MseI TTAA 7 cut(s) 189, 222, 723, 1050, 1515, 1524, 1641
MslI CAYNNNNRTG 2 cut(s) 619, 1202
MspI CCGG 8 cut(s) 53, 141, 416, 585, 662, 669, 677, 1417
MspR9I CCNGG 6 cut(s) 53, 141, 663, 669, 678, 1418
MvnI CGCG 1 cut(s) 1376
MwoI GCNNNNNNNGC 2 cut(s) 24, 906
NciI CCSGG 6 cut(s) 53, 141, 663, 669, 678, 1418
NcoI CCATGG 1 cut(s) 614
NdeII GATC 5 cut(s) 310, 333, 376, 1258, 1579
NlaIV GGNNCC 5 cut(s) 598, 666, 667, 805, 991
NmuCI GTSAC 3 cut(s) 422, 929, 1370
NsiI ATGCAT 2 cut(s) 343, 789
NspI RCATGY 3 cut(s) 345, 414, 791
PaeI GCATGC 1 cut(s) 345
PciSI GCTCTTC 2 cut(s) 711, 1551
PcsI WCGNNNNNNNCGW 1 cut(s) 1540
PfeI GAWTC 2 cut(s) 658, 1673
PflMI CCANNNNNTGG 1 cut(s) 1020
PkrI GCNGC 7 cut(s) 60, 255, 845, 899, 1071, 1242, 1423
PleI GAGTC 5 cut(s) 439, 571, 1480, 1598, 1655
PpsI GAGTC 5 cut(s) 439, 571, 1480, 1598, 1655
PshAI GACNNNNGTC 2 cut(s) 411, 741
PshBI ATTAAT 1 cut(s) 1641
PspEI GGTNACC 1 cut(s) 929
PspN4I GGNNCC 5 cut(s) 598, 666, 667, 805, 991
PspOMI GGGCCC 1 cut(s) 665
PspPI GGNCC 5 cut(s) 292, 506, 665, 666, 990
PsuI RGATCY 3 cut(s) 310, 333, 376
RseI CAYNNNNRTG 2 cut(s) 619, 1202
SapI GCTCTTC 2 cut(s) 711, 1551
SaqAI TTAA 7 cut(s) 189, 222, 723, 1050, 1515, 1524, 1641
SatI GCNGC 7 cut(s) 59, 254, 844, 898, 1070, 1241, 1422
Sau3AI GATC 5 cut(s) 310, 333, 376, 1258, 1579
Sau96I GGNCC 5 cut(s) 292, 506, 665, 666, 990
SchI GAGTC 5 cut(s) 439, 572, 1481, 1598, 1655
ScrFI CCNGG 6 cut(s) 53, 141, 663, 669, 678, 1418
SduI GDGCHC 3 cut(s) 529, 669, 1209
SfaNI GCATC 3 cut(s) 240, 774, 1408
SfcI CTRYAG 2 cut(s) 233, 450
SinI GGWCC 3 cut(s) 292, 506, 990
SmiMI CAYNNNNRTG 2 cut(s) 619, 1202
SmlI CTYRAG 1 cut(s) 30
SmoI CTYRAG 1 cut(s) 30
SphI GCATGC 1 cut(s) 345
Sse9I AATT 7 cut(s) 725, 1035, 1127, 1519, 1545, 1638, 1642
SsiI CCGC 5 cut(s) 18, 1097, 1241, 1421, 1529
SspI AATATT 1 cut(s) 1272
SspMI CTAG 1 cut(s) 1236
StyD4I CCNGG 6 cut(s) 51, 139, 661, 667, 676, 1416
StyI CCWWGG 3 cut(s) 394, 614, 1562
TaiI ACGT 2 cut(s) 180, 741
TaqI TCGA 5 cut(s) 206, 248, 690, 969, 1405
TaqII GACCGA 1 cut(s) 1271
TasI AATT 7 cut(s) 725, 1035, 1127, 1519, 1545, 1638, 1642
TatI WGTACW 2 cut(s) 237, 762
TauI GCSGC 2 cut(s) 1243, 1424
TfiI GAWTC 2 cut(s) 658, 1673
Tru1I TTAA 7 cut(s) 189, 222, 723, 1050, 1515, 1524, 1641
Tru9I TTAA 7 cut(s) 189, 222, 723, 1050, 1515, 1524, 1641
TscAI CASTG 8 cut(s) 88, 247, 433, 581, 817, 1050, 1209, 1291
TseFI GTSAC 3 cut(s) 422, 929, 1370
TseI GCWGC 5 cut(s) 58, 253, 843, 897, 1069
Tsp45I GTSAC 3 cut(s) 422, 929, 1370
TspDTI ATGAA 4 cut(s) 197, 641, 1265, 1569
TspGWI ACGGA 1 cut(s) 1281
TspRI CASTG 8 cut(s) 88, 247, 433, 581, 817, 1050, 1209, 1291
Van91I CCANNNNNTGG 1 cut(s) 1020
VneI GTGCAC 1 cut(s) 1205
VpaK11BI GGWCC 3 cut(s) 292, 506, 990
VspI ATTAAT 1 cut(s) 1641
XagI CCTNNNNNAGG 1 cut(s) 1364
XapI RAATTY 4 cut(s) 725, 1035, 1127, 1545
XceI RCATGY 3 cut(s) 345, 414, 791
XspI CTAG 1 cut(s) 1236
Zsp2I ATGCAT 2 cut(s) 343, 789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.