Transposase-associated domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 397 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 329 |
| AciI | CCGC | 2 cut(s) | 254, 484 |
| AclWI | GGATC | 1 cut(s) | 438 |
| AcoI | YGGCCR | 1 cut(s) | 422 |
| AcsI | RAATTY | 1 cut(s) | 281 |
| AcuI | CTGAAG | 1 cut(s) | 47 |
| AfaI | GTAC | 1 cut(s) | 320 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 161, 329 |
| AgsI | TTSAA | 5 cut(s) | 38, 59, 236, 299, 463 |
| AjnI | CCWGG | 1 cut(s) | 322 |
| AluBI | AGCT | 5 cut(s) | 43, 182, 377, 410, 453 |
| AluI | AGCT | 5 cut(s) | 43, 182, 377, 410, 453 |
| AlwI | GGATC | 1 cut(s) | 438 |
| AoxI | GGCC | 1 cut(s) | 422 |
| ApeKI | GCWGC | 2 cut(s) | 167, 410 |
| ApoI | RAATTY | 1 cut(s) | 281 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 42 |
| AspLEI | GCGC | 1 cut(s) | 250 |
| AspS9I | GGNCC | 1 cut(s) | 212 |
| AvaII | GGWCC | 1 cut(s) | 212 |
| BaeGI | GKGCMC | 1 cut(s) | 89 |
| BbvI | GCAGC | 2 cut(s) | 154, 397 |
| BccI | CCATC | 2 cut(s) | 71, 218 |
| BciT130I | CCWGG | 1 cut(s) | 324 |
| BfaI | CTAG | 1 cut(s) | 216 |
| BisI | GCNGC | 2 cut(s) | 168, 411 |
| BlsI | GCNGC | 2 cut(s) | 169, 412 |
| Bme1390I | CCNGG | 1 cut(s) | 324 |
| Bme18I | GGWCC | 1 cut(s) | 212 |
| BmgT120I | GGNCC | 1 cut(s) | 212 |
| BmrFI | CCNGG | 1 cut(s) | 324 |
| BmsI | GCATC | 4 cut(s) | 184, 235, 262, 454 |
| BsaJI | CCNNGG | 1 cut(s) | 322 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 161, 329 |
| Bse118I | RCCGGY | 1 cut(s) | 424 |
| Bse3DI | GCAATG | 2 cut(s) | 128, 235 |
| BseBI | CCWGG | 1 cut(s) | 324 |
| BseDI | CCNNGG | 1 cut(s) | 322 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 161, 329 |
| BseMI | GCAATG | 2 cut(s) | 128, 235 |
| BseSI | GKGCMC | 1 cut(s) | 89 |
| BseXI | GCAGC | 2 cut(s) | 154, 397 |
| BshFI | GGCC | 1 cut(s) | 424 |
| BsiSI | CCGG | 1 cut(s) | 425 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 161, 329 |
| BsnI | GGCC | 1 cut(s) | 424 |
| Bsp1286I | GDGCHC | 1 cut(s) | 89 |
| Bsp143I | GATC | 2 cut(s) | 61, 430 |
| BspACI | CCGC | 2 cut(s) | 254, 484 |
| BspANI | GGCC | 1 cut(s) | 424 |
| BspPI | GGATC | 1 cut(s) | 438 |
| BsrDI | GCAATG | 2 cut(s) | 128, 235 |
| BsrFI | RCCGGY | 1 cut(s) | 424 |
| BssAI | RCCGGY | 1 cut(s) | 424 |
| BssECI | CCNNGG | 1 cut(s) | 322 |
| BssMI | GATC | 2 cut(s) | 61, 430 |
| Bst2UI | CCWGG | 1 cut(s) | 324 |
| Bst4CI | ACNGT | 2 cut(s) | 212, 386 |
| BstC8I | GCNNGC | 3 cut(s) | 125, 415, 443 |
| BstDEI | CTNAG | 1 cut(s) | 480 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 159 |
| BstHHI | GCGC | 1 cut(s) | 250 |
| BstKTI | GATC | 2 cut(s) | 64, 433 |
| BstMBI | GATC | 2 cut(s) | 61, 430 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 124 |
| BstNI | CCWGG | 1 cut(s) | 324 |
| BstNSI | RCATGY | 3 cut(s) | 85, 417, 421 |
| BstSCI | CCNGG | 1 cut(s) | 322 |
| BstSLI | GKGCMC | 1 cut(s) | 89 |
| BstV1I | GCAGC | 2 cut(s) | 154, 397 |
| BsuRI | GGCC | 1 cut(s) | 424 |
| Cac8I | GCNNGC | 3 cut(s) | 125, 415, 443 |
| CfoI | GCGC | 1 cut(s) | 250 |
| Cfr10I | RCCGGY | 1 cut(s) | 424 |
| Cfr13I | GGNCC | 1 cut(s) | 212 |
| Csp6I | GTAC | 1 cut(s) | 319 |
| CviAII | CATG | 7 cut(s) | 82, 119, 145, 352, 414, 418, 489 |
| CviJI | RGCY | 8 cut(s) | 43, 127, 167, 182, 377, 410, 424, 453 |
| CviKI_1 | RGCY | 8 cut(s) | 43, 127, 167, 182, 377, 410, 424, 453 |
| CviQI | GTAC | 1 cut(s) | 319 |
| DdeI | CTNAG | 1 cut(s) | 480 |
| DpnI | GATC | 2 cut(s) | 63, 432 |
| DpnII | GATC | 2 cut(s) | 61, 430 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 397 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 397 |
| EaeI | YGGCCR | 1 cut(s) | 422 |
| Eco47I | GGWCC | 1 cut(s) | 212 |
| Eco57I | CTGAAG | 1 cut(s) | 47 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 159 |
| EcoRII | CCWGG | 1 cut(s) | 322 |
| EcoT22I | ATGCAT | 1 cut(s) | 419 |
| FaeI | CATG | 7 cut(s) | 85, 122, 148, 355, 417, 421, 492 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 51, 83 |
| FatI | CATG | 7 cut(s) | 81, 118, 144, 351, 413, 417, 488 |
| Fnu4HI | GCNGC | 2 cut(s) | 168, 411 |
| Fsp4HI | GCNGC | 2 cut(s) | 168, 411 |
| FspBI | CTAG | 1 cut(s) | 216 |
| GlaI | GCGC | 1 cut(s) | 249 |
| GluI | GCNGC | 2 cut(s) | 168, 411 |
| HaeIII | GGCC | 1 cut(s) | 424 |
| HapII | CCGG | 1 cut(s) | 425 |
| HhaI | GCGC | 1 cut(s) | 250 |
| Hin1II | CATG | 7 cut(s) | 85, 122, 148, 355, 417, 421, 492 |
| Hin6I | GCGC | 1 cut(s) | 248 |
| HinP1I | GCGC | 1 cut(s) | 248 |
| HindIII | AAGCTT | 1 cut(s) | 41 |
| HpaII | CCGG | 1 cut(s) | 425 |
| Hpy188I | TCNGA | 1 cut(s) | 27 |
| Hpy188III | TCNNGA | 2 cut(s) | 236, 269 |
| HpyAV | CCTTC | 1 cut(s) | 9 |
| HpyCH4III | ACNGT | 2 cut(s) | 212, 386 |
| HpyCH4V | TGCA | 6 cut(s) | 133, 208, 358, 413, 417, 477 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 124 |
| HpyF3I | CTNAG | 1 cut(s) | 480 |
| Hsp92II | CATG | 7 cut(s) | 85, 122, 148, 355, 417, 421, 492 |
| HspAI | GCGC | 1 cut(s) | 248 |
| Kzo9I | GATC | 2 cut(s) | 61, 430 |
| LmnI | GCTCC | 1 cut(s) | 192 |
| LpnPI | CCDG | 5 cut(s) | 94, 282, 309, 336, 438 |
| Lsp1109I | GCAGC | 2 cut(s) | 154, 397 |
| LweI | GCATC | 4 cut(s) | 184, 235, 262, 454 |
| MaeI | CTAG | 1 cut(s) | 216 |
| MaeIII | GTNAC | 1 cut(s) | 140 |
| MalI | GATC | 2 cut(s) | 63, 432 |
| MboI | GATC | 2 cut(s) | 61, 430 |
| MboII | GAAGA | 4 cut(s) | 71, 89, 251, 254 |
| MfeI | CAATTG | 1 cut(s) | 134 |
| MhlI | GDGCHC | 1 cut(s) | 89 |
| MluCI | AATT | 4 cut(s) | 33, 134, 281, 314 |
| MmeI | TCCRAC | 1 cut(s) | 368 |
| MnlI | CCTC | 3 cut(s) | 165, 261, 272 |
| Mph1103I | ATGCAT | 1 cut(s) | 419 |
| MroXI | GAANNNNTTC | 1 cut(s) | 42 |
| MseI | TTAA | 1 cut(s) | 69 |
| MslI | CAYNNNNRTG | 1 cut(s) | 418 |
| MspA1I | CMGCKG | 1 cut(s) | 410 |
| MspI | CCGG | 1 cut(s) | 425 |
| MspR9I | CCNGG | 1 cut(s) | 324 |
| MunI | CAATTG | 1 cut(s) | 134 |
| MvaI | CCWGG | 1 cut(s) | 324 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 124 |
| NdeII | GATC | 2 cut(s) | 61, 430 |
| NlaIII | CATG | 7 cut(s) | 85, 122, 148, 355, 417, 421, 492 |
| NsiI | ATGCAT | 1 cut(s) | 419 |
| NspI | RCATGY | 3 cut(s) | 85, 417, 421 |
| PaeI | GCATGC | 1 cut(s) | 417 |
| PdmI | GAANNNNTTC | 1 cut(s) | 42 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 329 |
| PkrI | GCNGC | 2 cut(s) | 169, 412 |
| Psp6I | CCWGG | 1 cut(s) | 322 |
| PspGI | CCWGG | 1 cut(s) | 322 |
| PspPI | GGNCC | 1 cut(s) | 212 |
| PvuII | CAGCTG | 1 cut(s) | 410 |
| RsaI | GTAC | 1 cut(s) | 320 |
| RsaNI | GTAC | 1 cut(s) | 319 |
| RseI | CAYNNNNRTG | 1 cut(s) | 418 |
| SaqAI | TTAA | 1 cut(s) | 69 |
| SatI | GCNGC | 2 cut(s) | 168, 411 |
| Sau3AI | GATC | 2 cut(s) | 61, 430 |
| Sau96I | GGNCC | 1 cut(s) | 212 |
| ScrFI | CCNGG | 1 cut(s) | 324 |
| SduI | GDGCHC | 1 cut(s) | 89 |
| SetI | ASST | 8 cut(s) | 45, 157, 184, 264, 328, 379, 412, 455 |
| SfaNI | GCATC | 4 cut(s) | 184, 235, 262, 454 |
| SinI | GGWCC | 1 cut(s) | 212 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 418 |
| SphI | GCATGC | 1 cut(s) | 417 |
| Sse9I | AATT | 4 cut(s) | 33, 134, 281, 314 |
| SsiI | CCGC | 2 cut(s) | 254, 484 |
| SspMI | CTAG | 1 cut(s) | 216 |
| StyD4I | CCNGG | 1 cut(s) | 322 |
| TaaI | ACNGT | 2 cut(s) | 212, 386 |
| TasI | AATT | 4 cut(s) | 33, 134, 281, 314 |
| Tru1I | TTAA | 1 cut(s) | 69 |
| Tru9I | TTAA | 1 cut(s) | 69 |
| TseI | GCWGC | 2 cut(s) | 167, 410 |
| TspDTI | ATGAA | 3 cut(s) | 17, 89, 340 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 329 |
| VpaK11BI | GGWCC | 1 cut(s) | 212 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 159 |
| XapI | RAATTY | 1 cut(s) | 281 |
| XceI | RCATGY | 3 cut(s) | 85, 417, 421 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 197 |
| XmnI | GAANNNNTTC | 1 cut(s) | 42 |
| XspI | CTAG | 1 cut(s) | 216 |
| Zsp2I | ATGCAT | 1 cut(s) | 419 |