Rw7G036550

source UniProtKB

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
55294152 .. 55297743
3592 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G036550.1

Sequence Viewer

Length: 1626 bp
ATGCATATAGAGAAAAATGTATGTGATAGTCTTATAGGGACCTTGCTGAATATTCCTGGAAAAACAAAGGATGGGGTGAAAACTCGGTTGGATCTAGTCGAAATGGGTATTAGATTAGGATTGAAGCCTGATCTCGAAGGTCCCAAGAAGGAGCGCTTGCCATTGGCAAGCTGGAACTTAAAGACAAATGAAAAAAGATGCATGTGTGGGTCTTTTTTTGGTATGAAGGTTCCTGAAGGATATTCTTCTAACATATCAAACCTGGTTTCCATGGATGATTTAAGGCTTAGTGGACTTAAATCCCATGATTGTCATGCCTTAATGCAACAACTCCTCCCTGTTGCCATCCGTGGTGTACTTGAAAAGCCGGTCAGAATTGCTGTGATAAGGTTGTGTCTGTTTTTTAATGAAATCTGCAGCAAGACTATCGATGGTTCAAGGCTGCCAAAAATCCAAAATGAACTTGTTGAAACATTGTGTGAGCTGGAAAAGTACTTCCCCCCATCCTTTTTTGACATAATGGTTCATCTAACAGTTCACCTAGTTAGAGAGGTGGAGTTATGTGGACCGGTTTGTTTTCGATGGATGTATCCCTTCGAGAGGTACATGAAGATCTGCAAAGGATATGTTCGAAATAGAAATCGGCCAGAAGGTTGCATTGCCGAGTGTTATATTGCTGAGGAGGCGGTTGAGTTTTTAGCGGAAATGTTCGTCGACGACAAGACTATTGGGATCCCAGCTGGCCCTCGCACAGTAGACAAGCCTACCTCAGGTGCTACAATTGTTAGTGTTTATGGCAAAGTATTTGACGAAGCTCATCTCTGCGTGCTTCAAAACACGGATGAATTCAGAAGCTATTTTGATGAACACTTGGAATATTTGAAAAGGGAATTTCCTAAAAACAAAAAGAATGAAAAGTGGCTTACGGACAAGCAAAACAAGACGTTTGCAGATTGGTTGAAGGAGAGGGTTGCTGTTCAACTTAGTGAACCAGATGCTAACATCCCTGAGATTGTCAGGTGGCTTTCAGATAAACCGAGCAATGAAGTACCGAAGTTCAGTGGTTACAGAATTGCGGGAGTCCAGTATAACACAAGGAAGCGCGATGATGTTAGATCGACGCAAAACAGTGGTGTCTACTTGCTTGCTAAGACACCACAAGTAGCTACTGCTAGGGATAAAAGGCCAATTATTGATGATATGAGTTTCTATAGTGTGATTACTGAAATCTGGGAGCTCGATTATGAAAAGTTTAGGATCCCGATCTTTAAGTGTGATTGGGTAGAGAATAGTAGAGGTGTGAAGGTAGATGAGCTTGGGTTCACATTGGTCAATTTGAATAAGAAAGGTCATTTAAATGACACTTTTGGGGCATTTGAGATTGGTCCTGAAAAGAGGAAAATTGTACTGGAATCAGCTTCATCAAAATGGAGGGAGTTCAAGTCCCGGCTTACAAGGCATTATATTATGCCTTACTTGGATGACCCTGAATCCTTAAAGTTTCCTCCAGATGATTATAGATTCATCAACAAAGATCATTGGACTTTGTGGCTGAACGGACAAACCCAAAATTTCTTAGACGGTTCGGTTAAGTGTACAAAAAATATTAGAAGAGGAAAGAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

541

Amino Acids

62.6

Weight (kDa)

8.62

Isoelectric Point (pI)

41.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4218 PF13960 138 - 237 1.1e-39 Domain of unknown function (DUF4218)
DUF4216 PF13952 411 - 456 7.6e-09 Domain of unknown function (DUF4216)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000015)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02311 FvH4_1g13961 FvH4_1g22120 FvH4_1g22121 FvH4_1g22122 FvH4_1g23803 FvH4_1g23921 FvH4_1g28422 FvH4_1g29232 FvH4_1g29711 FvH4_1g29805 FvH4_1g29806 FvH4_2g00032 FvH4_2g00812 FvH4_2g02271 FvH4_2g02272 FvH4_2g02785 FvH4_2g04944 FvH4_2g04945 FvH4_2g07143 FvH4_2g07144 FvH4_2g07753 FvH4_2g07991 FvH4_2g08941 FvH4_2g11271 FvH4_2g13851 FvH4_2g14771 FvH4_2g19023 FvH4_2g20441 FvH4_2g21542 FvH4_3g14320 FvH4_3g16301 FvH4_3g16302 FvH4_3g18963 FvH4_3g21083 FvH4_3g21361 FvH4_3g22001 FvH4_3g22111 FvH4_3g22562 FvH4_3g23523 FvH4_3g25312 FvH4_3g26061 FvH4_3g29331 FvH4_3g29831 FvH4_3g30391 FvH4_3g30443 FvH4_3g30614 FvH4_3g31714 FvH4_3g31743 FvH4_3g32192 FvH4_3g32261 FvH4_3g32804 FvH4_3g33044 FvH4_3g33045 FvH4_3g33093 FvH4_3g36581 FvH4_3g36582 FvH4_3g41971 FvH4_4g03322 FvH4_4g04242 FvH4_4g05702 FvH4_4g08648 FvH4_4g09213 FvH4_4g10051 FvH4_4g10253 FvH4_4g10471 FvH4_4g12773 FvH4_4g13831 FvH4_4g13832 FvH4_4g13891 FvH4_4g14282 FvH4_4g14283 FvH4_4g14443 FvH4_4g14562 FvH4_4g14563 FvH4_4g15322 FvH4_4g16172 FvH4_4g16174 FvH4_4g19121 FvH4_4g25941 FvH4_5g03061 FvH4_5g06092 FvH4_5g08081 FvH4_5g08082 FvH4_5g18422 FvH4_5g18423 FvH4_5g19272 FvH4_5g19471 FvH4_5g21221 FvH4_5g24272 FvH4_5g26171 FvH4_5g30952 FvH4_5g31512 FvH4_5g31513 FvH4_5g35083 FvH4_5g35211 FvH4_5g37211 FvH4_5g37212 FvH4_6g06671 FvH4_6g13841 FvH4_6g17381 FvH4_6g20142 FvH4_6g21813 FvH4_6g21900 FvH4_6g22901 FvH4_6g23254 FvH4_6g23352 FvH4_6g23592 FvH4_6g28112 FvH4_6g30093 FvH4_6g30771 FvH4_6g30772 FvH4_6g31292 FvH4_6g31483 FvH4_6g33071 FvH4_6g33481 FvH4_6g34821 FvH4_6g37043 FvH4_6g39685 FvH4_6g40311 FvH4_6g43082 FvH4_7g00291 FvH4_7g01731 FvH4_7g02153 FvH4_7g02991 FvH4_7g06091 FvH4_7g06092 FvH4_7g07224 FvH4_7g07901 FvH4_7g10641 FvH4_7g13281 FvH4_7g16902 FvH4_7g17991 FvH4_c18g00010
malus_domestica MD03G1146400.v1.1 MD12G1219800.v1.1
prunus_persica Prupe.6G012900_v2.0.a1 Prupe.6G136200_v2.0.a1
pyrus_communis pycom02g17950 pycom03g09510 pycom05g02880 pycom07g13380 pycom07g21950 pycom10g11450 pycom10g11460 pycom10g12890 pycom11g15000 pycom12646g00130 pycom13g21890 pycom17g19360
rosa_chinensis RchiOBHm_Chr1g0321891 RchiOBHm_Chr1g0321901 RchiOBHm_Chr1g0331761 RchiOBHm_Chr2g0084301 RchiOBHm_Chr2g0095191 RchiOBHm_Chr2g0111791 RchiOBHm_Chr2g0114991 RchiOBHm_Chr2g0127551 RchiOBHm_Chr2g0129601 RchiOBHm_Chr2g0133591 RchiOBHm_Chr2g0136601 RchiOBHm_Chr2g0143321 RchiOBHm_Chr3g0458241 RchiOBHm_Chr3g0483841 RchiOBHm_Chr3g0483851 RchiOBHm_Chr3g0495641 RchiOBHm_Chr4g0408001 RchiOBHm_Chr4g0414211 RchiOBHm_Chr4g0414221 RchiOBHm_Chr4g0415141 RchiOBHm_Chr4g0417061 RchiOBHm_Chr4g0421351 RchiOBHm_Chr4g0433621 RchiOBHm_Chr4g0436001 RchiOBHm_Chr5g0007671 RchiOBHm_Chr5g0020851 RchiOBHm_Chr5g0024741 RchiOBHm_Chr5g0040541 RchiOBHm_Chr5g0064651 RchiOBHm_Chr5g0064781 RchiOBHm_Chr5g0066161 RchiOBHm_Chr5g0067601 RchiOBHm_Chr5g0067611 RchiOBHm_Chr6g0264621 RchiOBHm_Chr6g0271091 RchiOBHm_Chr6g0274521 RchiOBHm_Chr6g0278261 RchiOBHm_Chr7g0184931 RchiOBHm_Chr7g0231571
rosa_laevigata RLG00000008333 RLG00000022575 RLG00000022597 RLG00000031744 RLG00000035085
rosa_multiflora Rmu_co7992550.1_g000001 Rmu_co8010316.1_g000001 Rmu_co8034468.1_g000001 Rmu_co8035868.1_g000001 Rmu_co8070070.1_g000001 Rmu_co8090484.1_g000001 Rmu_co8168904.1_g000001 Rmu_co8187196.1_g000001 Rmu_co8207388.1_g000001 Rmu_co8212806.1_g000001 Rmu_co8240057.1_g000001 Rmu_co8245773.1_g000001 Rmu_co8271583.1_g000001 Rmu_co8319165.1_g000001 Rmu_co8330561.1_g000001 Rmu_co8359235.1_g000001 Rmu_co8362839.1_g000001 Rmu_co8373057.1_g000002 Rmu_co8378597.1_g000001 Rmu_co8400477.1_g000001 Rmu_co8435579.1_g000001 Rmu_sc0000015.1_g000028 Rmu_sc0000055.1_g000001 Rmu_sc0000083.1_g000002 Rmu_sc0000104.1_g000020 Rmu_sc0000105.1_g000010 Rmu_sc0000110.1_g000008 Rmu_sc0000162.1_g000002 Rmu_sc0000353.1_g000016 Rmu_sc0000365.1_g000093 Rmu_sc0000366.1_g000007 Rmu_sc0000509.1_g000004 Rmu_sc0000509.1_g000005 Rmu_sc0000525.1_g000001 Rmu_sc0000565.1_g000038 Rmu_sc0000579.1_g000015 Rmu_sc0000607.1_g000020 Rmu_sc0000623.1_g000006 Rmu_sc0000633.1_g000013 Rmu_sc0000633.1_g000014 Rmu_sc0000690.1_g000050 Rmu_sc0000721.1_g000014 Rmu_sc0000741.1_g000010 Rmu_sc0000741.1_g000015 Rmu_sc0000811.1_g000020 Rmu_sc0000813.1_g000016 Rmu_sc0000814.1_g000011 Rmu_sc0000834.1_g000015 Rmu_sc0000834.1_g000016 Rmu_sc0000868.1_g000001 Rmu_sc0000924.1_g000049 Rmu_sc0000924.1_g000050 Rmu_sc0000928.1_g000031 Rmu_sc0001035.1_g000026 Rmu_sc0001053.1_g000010 Rmu_sc0001063.1_g000011 Rmu_sc0001065.1_g000002 Rmu_sc0001155.1_g000010 Rmu_sc0001192.1_g000004 Rmu_sc0001206.1_g000014 Rmu_sc0001206.1_g000019 Rmu_sc0001211.1_g000079 Rmu_sc0001238.1_g000040 Rmu_sc0001238.1_g000041 Rmu_sc0001248.1_g000007 Rmu_sc0001250.1_g000004 Rmu_sc0001250.1_g000006 Rmu_sc0001293.1_g000019 Rmu_sc0001309.1_g000013 Rmu_sc0001428.1_g000021 Rmu_sc0001428.1_g000022 Rmu_sc0001433.1_g000010 Rmu_sc0001441.1_g000004 Rmu_sc0001441.1_g000005 Rmu_sc0001461.1_g000091 Rmu_sc0001516.1_g000082 Rmu_sc0001580.1_g000018 Rmu_sc0001626.1_g000028 Rmu_sc0001698.1_g000022 Rmu_sc0001698.1_g000024 Rmu_sc0001782.1_g000030 Rmu_sc0001782.1_g000032 Rmu_sc0001849.1_g000047 Rmu_sc0001851.1_g000010 Rmu_sc0001856.1_g000001 Rmu_sc0001891.1_g000004 Rmu_sc0001904.1_g000035 Rmu_sc0001909.1_g000001 Rmu_sc0001916.1_g000013 Rmu_sc0001997.1_g000005 Rmu_sc0002070.1_g000039 Rmu_sc0002144.1_g000034 Rmu_sc0002212.1_g000013 Rmu_sc0002231.1_g000013 Rmu_sc0002232.1_g000008 Rmu_sc0002244.1_g000022 Rmu_sc0002251.1_g000007 Rmu_sc0002253.1_g000011 Rmu_sc0002323.1_g000006 Rmu_sc0002337.1_g000009 Rmu_sc0002451.1_g000025 Rmu_sc0002451.1_g000041 Rmu_sc0002460.1_g000026 Rmu_sc0002472.1_g000020 Rmu_sc0002669.1_g000074 Rmu_sc0002695.1_g000001 Rmu_sc0002695.1_g000003 Rmu_sc0002764.1_g000030 Rmu_sc0002786.1_g000001 Rmu_sc0002824.1_g000028 Rmu_sc0002847.1_g000008 Rmu_sc0002847.1_g000009 Rmu_sc0002986.1_g000061 Rmu_sc0002986.1_g000067 Rmu_sc0002986.1_g000068 Rmu_sc0002988.1_g000011 Rmu_sc0003110.1_g000022 Rmu_sc0003413.1_g000054 Rmu_sc0003413.1_g000058 Rmu_sc0003454.1_g000014 Rmu_sc0003454.1_g000016 Rmu_sc0003465.1_g000038 Rmu_sc0003465.1_g000040 Rmu_sc0003505.1_g000005 Rmu_sc0003505.1_g000028 Rmu_sc0003670.1_g000001 Rmu_sc0003692.1_g000034 Rmu_sc0003840.1_g000015 Rmu_sc0003862.1_g000015 Rmu_sc0003892.1_g000010 Rmu_sc0003981.1_g000014 Rmu_sc0004003.1_g000008 Rmu_sc0004031.1_g000005 Rmu_sc0004074.1_g000001 Rmu_sc0004135.1_g000010 Rmu_sc0004344.1_g000010 Rmu_sc0004344.1_g000011 Rmu_sc0004344.1_g000012 Rmu_sc0004392.1_g000010 Rmu_sc0004424.1_g000011 Rmu_sc0004502.1_g000024 Rmu_sc0004569.1_g000005 Rmu_sc0004602.1_g000056 Rmu_sc0004622.1_g000015 Rmu_sc0004798.1_g000018 Rmu_sc0004811.1_g000014 Rmu_sc0004842.1_g000001 Rmu_sc0004990.1_g000021 Rmu_sc0005023.1_g000029 Rmu_sc0005072.1_g000015 Rmu_sc0005449.1_g000001 Rmu_sc0005654.1_g000010 Rmu_sc0005676.1_g000008 Rmu_sc0005685.1_g000026 Rmu_sc0005913.1_g000020 Rmu_sc0005947.1_g000004 Rmu_sc0006420.1_g000020 Rmu_sc0006450.1_g000003 Rmu_sc0006532.1_g000001 Rmu_sc0006558.1_g000001 Rmu_sc0006583.1_g000017 Rmu_sc0006669.1_g000002 Rmu_sc0006739.1_g000003 Rmu_sc0006746.1_g000012 Rmu_sc0006803.1_g000019 Rmu_sc0006888.1_g000056 Rmu_sc0007341.1_g000014 Rmu_sc0007341.1_g000015 Rmu_sc0007435.1_g000001 Rmu_sc0007486.1_g000005 Rmu_sc0007686.1_g000006 Rmu_sc0007876.1_g000006 Rmu_sc0007888.1_g000006 Rmu_sc0008079.1_g000008 Rmu_sc0008440.1_g000006 Rmu_sc0008633.1_g000007 Rmu_sc0009546.1_g000002 Rmu_sc0010357.1_g000007 Rmu_sc0010385.1_g000003 Rmu_sc0010543.1_g000011 Rmu_sc0011563.1_g000001 Rmu_sc0012228.1_g000002 Rmu_sc0012491.1_g000001 Rmu_sc0012650.1_g000001 Rmu_sc0013205.1_g000006 Rmu_sc0013216.1_g000003 Rmu_sc0014191.1_g000001 Rmu_sc0014895.1_g000001 Rmu_sc0014957.1_g000001 Rmu_sc0015243.1_g000001 Rmu_sc0015746.1_g000001 Rmu_sc0017392.1_g000001 Rmu_sc0018470.1_g000001 Rmu_sc0018623.1_g000006 Rmu_sc0021556.1_g000004 Rmu_sc0022401.1_g000001 Rmu_sc0024611.1_g000001 Rmu_sc0024953.1_g000001 Rmu_sc0025466.1_g000001 Rmu_sc0025892.1_g000001 Rmu_sc0025909.1_g000001 Rmu_sc0026281.1_g000001 Rmu_sc0027327.1_g000001 Rmu_sc0028428.1_g000001 Rmu_sc0029754.1_g000001 Rmu_sc0032120.1_g000001 Rmu_sc0039702.1_g000001 Rmu_ssc0000089.1_g000022 Rmu_ssc0000150.1_g000006 Rmu_ssc0000150.1_g000007 Rmu_ssc0000231.1_g000010 Rmu_ssc0000233.1_g000059 Rmu_ssc0000233.1_g000061
rosa_roxburghii Rroxscaffold_1G00002110 Rroxscaffold_1G00003320 Rroxscaffold_1G00012840 Rroxscaffold_1G00013850 Rroxscaffold_1G00023980 Rroxscaffold_1G00029750 Rroxscaffold_1G00033890 Rroxscaffold_1G00042470 Rroxscaffold_1G00053360 Rroxscaffold_1G00054060 Rroxscaffold_2G00076150 Rroxscaffold_2G00089750 Rroxscaffold_2G00152600 Rroxscaffold_4G00299540 Rroxscaffold_4G00320960 Rroxscaffold_5G00338640 Rroxscaffold_5G00376300 Rroxscaffold_5G00377680 Rroxscaffold_6G00394120 Rroxscaffold_7G00213820 Rroxscaffold_7G00215950 Rroxscaffold_7G00217790
rosa_rugosa Rorug01G0075300 Rorug01G0094600 Rorug01G0094600 Rorug01G0101800.1 Rorug01G0309500 Rorug02G0256300 Rorug02G0465700 Rorug04G0045200 Rorug04G0091000 Rorug04G0091100 Rorug04G0091300 Rorug04G0178200 Rorug04G0450400 Rorug05G0144200 Rorug07G0202400 Rorug07G0326300
rosa_samantha Rh1AG266500 Rh1AG296100 Rh1AG408600 Rh1BG257900 Rh1BG392900 Rh1BG393000 Rh1CG125400 Rh1CG149300 Rh1CG405500 Rh1DG423700 Rh1DG423800 Rh2AG369400 Rh2BG234000 Rh2BG334600 Rh2CG157900 Rh2CG232800 Rh3AG146000 Rh3AG161400 Rh3AG217200 Rh3AG329700 Rh3CG223900 Rh3CG320600 Rh3DG258400 Rh4AG105000 Rh4AG340300 Rh4BG026600 Rh4BG138500 Rh4CG113500 Rh4CG322400 Rh4DG203100 Rh5AG169100 Rh5AG372400 Rh5AG440400 Rh5BG194300 Rh5CG228700 Rh5CG263400 Rh5CG272000 Rh5CG579400 Rh5DG175100 Rh5DG472600 Rh5DG493400 Rh6AG418900 Rh6CG192400 Rh6CG450200 Rh6DG127600 Rh6DG193500 Rh6DG294100 Rh6DG320400 Rh6DG349400 Rh7AG364800 Rh7AG443300 Rh7DG198300 Rh7DG346300
rosa_wichuraiana Rw0G003660 Rw0G004330 Rw0G020060 Rw0G020860 Rw0G021260 Rw1G001000 Rw1G001470 Rw1G001810 Rw1G005640 Rw1G006320 Rw1G010590 Rw1G013140 Rw1G016260 Rw1G016270 Rw1G016320 Rw1G017680 Rw1G019120 Rw1G021470 Rw1G027240 Rw1G028020 Rw1G030070 Rw2G003580 Rw2G007770 Rw2G012130 Rw2G012300 Rw2G013070 Rw2G014700 Rw2G017960 Rw2G028780 Rw2G034790 Rw2G035470 Rw2G036310 Rw2G039430 Rw2G040550 Rw2G042560 Rw3G005710 Rw3G010390 Rw3G012630 Rw3G015510 Rw3G016130 Rw3G020240 Rw3G020760 Rw3G021500 Rw3G023220 Rw3G026440 Rw3G026960 Rw3G029080 Rw3G029250 Rw4G001900 Rw4G004890 Rw4G005770 Rw4G006470 Rw4G008100 Rw4G009360 Rw4G009770 Rw4G014530 Rw4G015370 Rw4G023120 Rw5G002130 Rw5G006640 Rw5G014680 Rw5G015180 Rw5G016210 Rw5G019940 Rw5G026100 Rw5G029870 Rw5G034430 Rw5G035890 Rw5G041340 Rw5G048760 Rw5G048770 Rw6G004170 Rw6G007540 Rw6G007600 Rw6G009420 Rw6G010000 Rw6G020720 Rw6G022860 Rw7G007400 Rw7G007860 Rw7G027180 Rw7G032110 Rw7G033090 Rw7G034980 Rw7G036100 Rw7G036480 Rw7G036550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 714, 756, 1137
AccII CGCG 1 cut(s) 1104
AciI CCGC 3 cut(s) 686, 701, 1076
AclWI GGATC 5 cut(s) 99, 727, 740, 1252, 1265
AcoI YGGCCR 1 cut(s) 644
AcsI RAATTY 3 cut(s) 845, 890, 1570
AcuI CTGAAG 1 cut(s) 255
AfaI GTAC 6 cut(s) 357, 494, 605, 1050, 1407, 1597
AfeI AGCGCT 1 cut(s) 155
AfiI CCNNNNNNNGG 2 cut(s) 600, 770
AgeI ACCGGT 1 cut(s) 568
AjnI CCWGG 2 cut(s) 55, 261
AjuI GAANNNNNNNTTGG 2 cut(s) 71, 103
AluBI AGCT 9 cut(s) 171, 484, 740, 815, 855, 1166, 1237, 1315, 1418
AluI AGCT 9 cut(s) 171, 484, 740, 815, 855, 1166, 1237, 1315, 1418
Alw21I GWGCWC 1 cut(s) 1239
AlwI GGATC 5 cut(s) 99, 727, 740, 1252, 1265
Aor51HI AGCGCT 1 cut(s) 155
AoxI GGCC 3 cut(s) 644, 742, 1184
ApeKI GCWGC 2 cut(s) 417, 442
ApoI RAATTY 3 cut(s) 845, 890, 1570
AsiGI ACCGGT 1 cut(s) 568
AspLEI GCGC 2 cut(s) 156, 1104
AspS9I GGNCC 5 cut(s) 39, 140, 566, 743, 1385
AsuC2I CCSGG 1 cut(s) 1447
AsuHPI GGTGA 2 cut(s) 88, 530
AsuII TTCGAA 1 cut(s) 631
AvaII GGWCC 4 cut(s) 39, 140, 566, 1385
AxyI CCTNAGG 1 cut(s) 769
BamHI GGATCC 2 cut(s) 732, 1257
BanII GRGCYC 1 cut(s) 1239
Bbv12I GWGCWC 1 cut(s) 1239
BbvCI CCTCAGC 1 cut(s) 678
BbvI GCAGC 2 cut(s) 429, 429
BccI CCATC 5 cut(s) 65, 353, 425, 511, 576
BcgI CGANNNNNNTGC 2 cut(s) 409, 443
BciT130I CCWGG 2 cut(s) 57, 263
BciVI GTATCC 1 cut(s) 600
BcnI CCSGG 1 cut(s) 1447
BfaI CTAG 3 cut(s) 95, 542, 1173
BfmI CTRYAG 2 cut(s) 415, 1210
BfoI RGCGCY 1 cut(s) 157
BfuI GTATCC 1 cut(s) 600
BglII AGATCT 1 cut(s) 612
BisI GCNGC 2 cut(s) 418, 443
BlsI GCNGC 2 cut(s) 419, 444
BmcAI AGTACT 1 cut(s) 494
Bme1390I CCNGG 3 cut(s) 57, 263, 1447
Bme18I GGWCC 4 cut(s) 39, 140, 566, 1385
BmgT120I GGNCC 5 cut(s) 39, 140, 566, 743, 1385
BmiI GGNNCC 5 cut(s) 40, 142, 231, 734, 1259
BmrFI CCNGG 3 cut(s) 57, 263, 1447
BmsI GCATC 2 cut(s) 188, 985
BpmI CTGGAG 1 cut(s) 1491
Bpu10I CCTNAGC 1 cut(s) 678
Bpu14I TTCGAA 1 cut(s) 631
BpuMI CCSGG 1 cut(s) 1447
Bsa29I ATCGAT 1 cut(s) 429
BsaBI GATNNNNATC 1 cut(s) 1262
BsaJI CCNNGG 2 cut(s) 270, 349
BsaWI WCCGGW 1 cut(s) 568
BsaXI ACNNNNNCTCC 4 cut(s) 318, 348, 1427, 1457
Bsc4I CCNNNNNNNGG 2 cut(s) 600, 770
Bse118I RCCGGY 2 cut(s) 367, 568
Bse1I ACTGG 2 cut(s) 1084, 1413
Bse21I CCTNAGG 1 cut(s) 769
Bse3DI GCAATG 2 cut(s) 657, 1048
Bse8I GATNNNNATC 1 cut(s) 1262
BseBI CCWGG 2 cut(s) 57, 263
BseCI ATCGAT 1 cut(s) 429
BseDI CCNNGG 2 cut(s) 270, 349
BseGI GGATG 8 cut(s) 76, 280, 345, 503, 591, 847, 1002, 1486
BseJI GATNNNNATC 1 cut(s) 1262
BseLI CCNNNNNNNGG 2 cut(s) 600, 770
BseMI GCAATG 2 cut(s) 657, 1048
BseMII CTCAG 3 cut(s) 669, 783, 999
BseNI ACTGG 2 cut(s) 1084, 1413
BseRI GAGGAG 2 cut(s) 323, 695
BseXI GCAGC 2 cut(s) 429, 429
BseYI CCCAGC 1 cut(s) 736
Bsh1236I CGCG 1 cut(s) 1104
BshFI GGCC 3 cut(s) 646, 744, 1186
BshTI ACCGGT 1 cut(s) 568
BshVI ATCGAT 1 cut(s) 429
BsiHKAI GWGCWC 1 cut(s) 1239
BsiSI CCGG 3 cut(s) 368, 569, 1447
BslFI GGGAC 3 cut(s) 52, 126, 1429
BslI CCNNNNNNNGG 2 cut(s) 600, 770
BsmFI GGGAC 3 cut(s) 52, 126, 1429
BsnI GGCC 3 cut(s) 646, 744, 1186
Bsp119I TTCGAA 1 cut(s) 631
Bsp1286I GDGCHC 1 cut(s) 1239
Bsp1407I TGTACA 1 cut(s) 1595
Bsp143I GATC 8 cut(s) 91, 130, 612, 732, 1115, 1257, 1263, 1534
Bsp19I CCATGG 1 cut(s) 270
BspACI CCGC 3 cut(s) 686, 701, 1076
BspANI GGCC 3 cut(s) 646, 744, 1186
BspCNI CTCAG 3 cut(s) 670, 782, 1000
BspDI ATCGAT 1 cut(s) 429
BspFNI CGCG 1 cut(s) 1104
BspLI GGNNCC 5 cut(s) 40, 142, 231, 734, 1259
BspMAI CTGCAG 1 cut(s) 419
BspPI GGATC 5 cut(s) 99, 727, 740, 1252, 1265
BspT104I TTCGAA 1 cut(s) 631
BsrDI GCAATG 2 cut(s) 657, 1048
BsrFI RCCGGY 2 cut(s) 367, 568
BsrGI TGTACA 1 cut(s) 1595
BsrI ACTGG 2 cut(s) 1084, 1413
BssAI RCCGGY 2 cut(s) 367, 568
BssECI CCNNGG 2 cut(s) 270, 349
BssMI GATC 8 cut(s) 91, 130, 612, 732, 1115, 1257, 1263, 1534
BssT1I CCWWGG 1 cut(s) 270
Bst2UI CCWGG 2 cut(s) 57, 263
Bst4CI ACNGT 4 cut(s) 535, 754, 1130, 1583
Bst6I CTCTTC 1 cut(s) 1606
BstAUI TGTACA 1 cut(s) 1595
BstBI TTCGAA 1 cut(s) 631
BstC8I GCNNGC 5 cut(s) 158, 169, 742, 827, 1146
BstDEI CTNAG 7 cut(s) 287, 678, 769, 983, 1008, 1149, 1576
BstDSI CCRYGG 2 cut(s) 270, 349
BstENI CCTNNNNNAGG 2 cut(s) 598, 768
BstF5I GGATG 8 cut(s) 76, 280, 345, 503, 591, 847, 1002, 1486
BstFNI CGCG 1 cut(s) 1104
BstH2I RGCGCY 1 cut(s) 157
BstHHI GCGC 2 cut(s) 156, 1104
BstKTI GATC 8 cut(s) 94, 133, 615, 735, 1118, 1260, 1266, 1537
BstMBI GATC 8 cut(s) 91, 130, 612, 732, 1115, 1257, 1263, 1534
BstMWI GCNNNNNNNGC 2 cut(s) 683, 1456
BstNI CCWGG 2 cut(s) 57, 263
BstNSI RCATGY 1 cut(s) 205
BstSCI CCNGG 3 cut(s) 55, 261, 1445
BstSFI CTRYAG 2 cut(s) 415, 1210
BstUI CGCG 1 cut(s) 1104
BstV1I GCAGC 2 cut(s) 429, 429
BstX2I RGATCY 4 cut(s) 91, 612, 732, 1257
BstYI RGATCY 4 cut(s) 91, 612, 732, 1257
Bsu15I ATCGAT 1 cut(s) 429
Bsu36I CCTNAGG 1 cut(s) 769
BsuI GTATCC 1 cut(s) 600
BsuRI GGCC 3 cut(s) 646, 744, 1186
BsuTUI ATCGAT 1 cut(s) 429
BtgI CCRYGG 2 cut(s) 270, 349
BtgZI GCGATG 1 cut(s) 1119
BtsCI GGATG 8 cut(s) 76, 280, 345, 503, 591, 847, 1002, 1486
BtsIMutI CAGTG 2 cut(s) 1066, 1135
Cac8I GCNNGC 5 cut(s) 158, 169, 742, 827, 1146
CfoI GCGC 2 cut(s) 156, 1104
Cfr10I RCCGGY 2 cut(s) 367, 568
Cfr13I GGNCC 5 cut(s) 39, 140, 566, 743, 1385
ClaI ATCGAT 1 cut(s) 429
CseI GACGC 1 cut(s) 1129
CsiI ACCWGGT 1 cut(s) 261
Csp6I GTAC 6 cut(s) 356, 493, 604, 1049, 1406, 1596
CspAI ACCGGT 1 cut(s) 568
CviAII CATG 5 cut(s) 202, 271, 305, 314, 607
CviQI GTAC 6 cut(s) 356, 493, 604, 1049, 1406, 1596
DdeI CTNAG 7 cut(s) 287, 678, 769, 983, 1008, 1149, 1576
DpnI GATC 8 cut(s) 93, 132, 614, 734, 1117, 1259, 1265, 1536
DpnII GATC 8 cut(s) 91, 130, 612, 732, 1115, 1257, 1263, 1534
DraI TTTAAA 1 cut(s) 1356
EaeI YGGCCR 1 cut(s) 644
Eam1104I CTCTTC 1 cut(s) 1606
EarI CTCTTC 1 cut(s) 1606
Ecl136II GAGCTC 1 cut(s) 1237
Eco130I CCWWGG 1 cut(s) 270
Eco24I GRGCYC 1 cut(s) 1239
Eco47I GGWCC 4 cut(s) 39, 140, 566, 1385
Eco47III AGCGCT 1 cut(s) 155
Eco53kI GAGCTC 1 cut(s) 1237
Eco57I CTGAAG 1 cut(s) 255
Eco81I CCTNAGG 1 cut(s) 769
EcoICRI GAGCTC 1 cut(s) 1237
EcoNI CCTNNNNNAGG 2 cut(s) 598, 768
EcoO109I RGGNCCY 2 cut(s) 39, 140
EcoRI GAATTC 1 cut(s) 845
EcoRII CCWGG 2 cut(s) 55, 261
EcoT14I CCWWGG 1 cut(s) 270
EcoT22I ATGCAT 2 cut(s) 6, 203
EcoT38I GRGCYC 1 cut(s) 1239
ErhI CCWWGG 1 cut(s) 270
FaeI CATG 5 cut(s) 205, 274, 308, 317, 610
FalI AAGNNNNNCTT 2 cut(s) 140, 172
FaqI GGGAC 3 cut(s) 52, 126, 1429
FatI CATG 5 cut(s) 201, 270, 304, 313, 606
FauI CCCGC 1 cut(s) 1069
FblI GTMKAC 3 cut(s) 714, 756, 1137
Fnu4HI GCNGC 2 cut(s) 418, 443
FokI GGATG 8 cut(s) 83, 287, 332, 490, 598, 854, 989, 1493
FriOI GRGCYC 1 cut(s) 1239
Fsp4HI GCNGC 2 cut(s) 418, 443
FspBI CTAG 3 cut(s) 95, 542, 1173
GlaI GCGC 2 cut(s) 155, 1103
GluI GCNGC 2 cut(s) 418, 443
GsaI CCCAGC 1 cut(s) 740
GsuI CTGGAG 1 cut(s) 1491
HaeII RGCGCY 1 cut(s) 157
HaeIII GGCC 3 cut(s) 646, 744, 1186
HapII CCGG 3 cut(s) 368, 569, 1447
HgaI GACGC 1 cut(s) 1129
HhaI GCGC 2 cut(s) 156, 1104
Hin1II CATG 5 cut(s) 205, 274, 308, 317, 610
Hin6I GCGC 2 cut(s) 154, 1102
HinP1I GCGC 2 cut(s) 154, 1102
HincII GTYRAC 1 cut(s) 715
HindII GTYRAC 1 cut(s) 715
HinfI GANTC 4 cut(s) 1080, 1412, 1490, 1521
HpaII CCGG 3 cut(s) 368, 569, 1447
HphI GGTGA 2 cut(s) 88, 530
Hpy188I TCNGA 3 cut(s) 374, 851, 1030
Hpy188III TCNNGA 6 cut(s) 134, 233, 598, 1261, 1388, 1508
Hpy99I CGWCG 3 cut(s) 716, 719, 1123
HpyAV CCTTC 8 cut(s) 131, 142, 220, 230, 604, 644, 955, 1297
HpyCH4III ACNGT 4 cut(s) 535, 754, 1130, 1583
HpyCH4IV ACGT 1 cut(s) 944
HpyCH4V TGCA 7 cut(s) 4, 201, 325, 417, 618, 657, 950
HpyF10VI GCNNNNNNNGC 2 cut(s) 683, 1456
HpyF3I CTNAG 7 cut(s) 287, 678, 769, 983, 1008, 1149, 1576
HpySE526I ACGT 1 cut(s) 944
Hsp92II CATG 5 cut(s) 205, 274, 308, 317, 610
HspAI GCGC 2 cut(s) 154, 1102
Kzo9I GATC 8 cut(s) 91, 130, 612, 732, 1115, 1257, 1263, 1534
LmnI GCTCC 2 cut(s) 151, 1234
Lsp1109I GCAGC 2 cut(s) 429, 429
LweI GCATC 2 cut(s) 188, 985
MabI ACCWGGT 1 cut(s) 261
MaeI CTAG 3 cut(s) 95, 542, 1173
MaeII ACGT 1 cut(s) 944
MaeIII GTNAC 1 cut(s) 1064
MalI GATC 8 cut(s) 93, 132, 614, 734, 1117, 1259, 1265, 1536
MboI GATC 8 cut(s) 91, 130, 612, 732, 1115, 1257, 1263, 1534
MboII GAAGA 3 cut(s) 237, 622, 1623
MfeI CAATTG 1 cut(s) 780
MflI RGATCY 4 cut(s) 91, 612, 732, 1257
MhlI GDGCHC 1 cut(s) 1239
MluCI AATT 9 cut(s) 375, 780, 845, 890, 1071, 1188, 1333, 1401, 1570
MlyI GAGTC 1 cut(s) 1089
MmeI TCCRAC 1 cut(s) 69
Mph1103I ATGCAT 2 cut(s) 6, 203
MseI TTAA 9 cut(s) 179, 281, 297, 320, 405, 1269, 1355, 1496, 1590
MslI CAYNNNNRTG 2 cut(s) 1356, 1426
MspA1I CMGCKG 1 cut(s) 740
MspI CCGG 3 cut(s) 368, 569, 1447
MspR9I CCNGG 3 cut(s) 57, 263, 1447
MunI CAATTG 1 cut(s) 780
MvaI CCWGG 2 cut(s) 57, 263
MvnI CGCG 1 cut(s) 1104
MwoI GCNNNNNNNGC 2 cut(s) 683, 1456
NciI CCSGG 1 cut(s) 1447
NcoI CCATGG 1 cut(s) 270
NdeII GATC 8 cut(s) 91, 130, 612, 732, 1115, 1257, 1263, 1534
NlaIII CATG 5 cut(s) 205, 274, 308, 317, 610
NlaIV GGNNCC 5 cut(s) 40, 142, 231, 734, 1259
NmeAIII GCCGAG 1 cut(s) 688
NsiI ATGCAT 2 cut(s) 6, 203
NspI RCATGY 1 cut(s) 205
NspV TTCGAA 1 cut(s) 631
PfeI GAWTC 3 cut(s) 1412, 1490, 1521
PfoI TCCNGGA 1 cut(s) 55
PinAI ACCGGT 1 cut(s) 568
PkrI GCNGC 2 cut(s) 419, 444
PleI GAGTC 1 cut(s) 1088
PpsI GAGTC 1 cut(s) 1088
PpuMI RGGWCCY 2 cut(s) 39, 140
Psp124BI GAGCTC 1 cut(s) 1239
Psp5II RGGWCCY 2 cut(s) 39, 140
Psp6I CCWGG 2 cut(s) 55, 261
PspFI CCCAGC 1 cut(s) 736
PspGI CCWGG 2 cut(s) 55, 261
PspN4I GGNNCC 5 cut(s) 40, 142, 231, 734, 1259
PspPI GGNCC 5 cut(s) 39, 140, 566, 743, 1385
PspPPI RGGWCCY 2 cut(s) 39, 140
PstI CTGCAG 1 cut(s) 419
PsuI RGATCY 4 cut(s) 91, 612, 732, 1257
PvuII CAGCTG 1 cut(s) 740
RsaI GTAC 6 cut(s) 357, 494, 605, 1050, 1407, 1597
RsaNI GTAC 6 cut(s) 356, 493, 604, 1049, 1406, 1596
RseI CAYNNNNRTG 2 cut(s) 1356, 1426
SacI GAGCTC 1 cut(s) 1239
SalI GTCGAC 1 cut(s) 713
SaqAI TTAA 9 cut(s) 179, 281, 297, 320, 405, 1269, 1355, 1496, 1590
SatI GCNGC 2 cut(s) 418, 443
Sau3AI GATC 8 cut(s) 91, 130, 612, 732, 1115, 1257, 1263, 1534
Sau96I GGNCC 5 cut(s) 39, 140, 566, 743, 1385
ScaI AGTACT 1 cut(s) 494
SchI GAGTC 1 cut(s) 1089
ScrFI CCNGG 3 cut(s) 57, 263, 1447
SduI GDGCHC 1 cut(s) 1239
SexAI ACCWGGT 1 cut(s) 261
SfaNI GCATC 2 cut(s) 188, 985
SfcI CTRYAG 2 cut(s) 415, 1210
SfuI TTCGAA 1 cut(s) 631
SgrDI CGTCGACG 1 cut(s) 713
SinI GGWCC 4 cut(s) 39, 140, 566, 1385
SmiI ATTTAAAT 1 cut(s) 1356
SmiMI CAYNNNNRTG 2 cut(s) 1356, 1426
Sse9I AATT 9 cut(s) 375, 780, 845, 890, 1071, 1188, 1333, 1401, 1570
SsiI CCGC 3 cut(s) 686, 701, 1076
SspI AATATT 3 cut(s) 52, 878, 1606
SspMI CTAG 3 cut(s) 95, 542, 1173
SstI GAGCTC 1 cut(s) 1239
StyD4I CCNGG 3 cut(s) 55, 261, 1445
StyI CCWWGG 1 cut(s) 270
SwaI ATTTAAAT 1 cut(s) 1356
TaaI ACNGT 4 cut(s) 535, 754, 1130, 1583
TaiI ACGT 1 cut(s) 947
TaqI TCGA 9 cut(s) 99, 135, 429, 580, 597, 631, 714, 1118, 1239
TasI AATT 9 cut(s) 375, 780, 845, 890, 1071, 1188, 1333, 1401, 1570
TatI WGTACW 4 cut(s) 355, 492, 1405, 1595
TfiI GAWTC 3 cut(s) 1412, 1490, 1521
Tru1I TTAA 9 cut(s) 179, 281, 297, 320, 405, 1269, 1355, 1496, 1590
Tru9I TTAA 9 cut(s) 179, 281, 297, 320, 405, 1269, 1355, 1496, 1590
TscAI CASTG 2 cut(s) 1066, 1135
TseI GCWGC 2 cut(s) 417, 442
TspGWI ACGGA 4 cut(s) 338, 854, 941, 1572
TspRI CASTG 2 cut(s) 1066, 1135
VpaK11BI GGWCC 4 cut(s) 39, 140, 566, 1385
XagI CCTNNNNNAGG 2 cut(s) 598, 768
XapI RAATTY 3 cut(s) 845, 890, 1570
XceI RCATGY 1 cut(s) 205
XcmI CCANNNNNNNNNTGG 1 cut(s) 168
XmiI GTMKAC 3 cut(s) 714, 756, 1137
XspI CTAG 3 cut(s) 95, 542, 1173
ZrmI AGTACT 1 cut(s) 494
Zsp2I ATGCAT 2 cut(s) 6, 203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.