Transposase-associated domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transpos_assoc | PF13963 | 3 - 77 | 6.5e-14 | Transposase-associated domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 502 |
| Acc16I | TGCGCA | 1 cut(s) | 354 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 434 |
| AccIII | TCCGGA | 1 cut(s) | 613 |
| AciI | CCGC | 3 cut(s) | 359, 744, 1088 |
| AclWI | GGATC | 2 cut(s) | 905, 918 |
| AcsI | RAATTY | 3 cut(s) | 386, 1009, 1191 |
| AfaI | GTAC | 1 cut(s) | 425 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 266, 434, 1118 |
| AflIII | ACRYGT | 1 cut(s) | 525 |
| AjnI | CCWGG | 1 cut(s) | 427 |
| AluBI | AGCT | 4 cut(s) | 287, 482, 688, 1001 |
| AluI | AGCT | 4 cut(s) | 287, 482, 688, 1001 |
| Alw21I | GWGCWC | 1 cut(s) | 662 |
| Alw26I | GTCTC | 2 cut(s) | 604, 784 |
| AlwI | GGATC | 2 cut(s) | 905, 918 |
| Ama87I | CYCGRG | 1 cut(s) | 786 |
| Aor13HI | TCCGGA | 1 cut(s) | 613 |
| ApeKI | GCWGC | 5 cut(s) | 50, 272, 806, 919, 998 |
| ApoI | RAATTY | 3 cut(s) | 386, 1009, 1191 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1041 |
| AspLEI | GCGC | 2 cut(s) | 355, 870 |
| AspS9I | GGNCC | 1 cut(s) | 317 |
| AsuC2I | CCSGG | 1 cut(s) | 557 |
| AsuHPI | GGTGA | 3 cut(s) | 141, 851, 1150 |
| AvaI | CYCGRG | 1 cut(s) | 786 |
| AvaII | GGWCC | 1 cut(s) | 317 |
| BaeGI | GKGCMC | 2 cut(s) | 194, 681 |
| BamHI | GGATCC | 1 cut(s) | 910 |
| BauI | CACGAG | 1 cut(s) | 954 |
| Bbv12I | GWGCWC | 1 cut(s) | 662 |
| BbvI | GCAGC | 5 cut(s) | 37, 259, 793, 931, 1010 |
| BccI | CCATC | 3 cut(s) | 176, 896, 983 |
| BciT130I | CCWGG | 1 cut(s) | 429 |
| BcnI | CCSGG | 1 cut(s) | 557 |
| BcoDI | GTCTC | 2 cut(s) | 604, 784 |
| BfaI | CTAG | 2 cut(s) | 90, 321 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 928 |
| BglII | AGATCT | 1 cut(s) | 1063 |
| BisI | GCNGC | 5 cut(s) | 51, 273, 807, 920, 999 |
| BlsI | GCNGC | 5 cut(s) | 52, 274, 808, 921, 1000 |
| Bme1390I | CCNGG | 2 cut(s) | 429, 557 |
| Bme18I | GGWCC | 1 cut(s) | 317 |
| BmeT110I | CYCGRG | 1 cut(s) | 786 |
| BmgT120I | GGNCC | 1 cut(s) | 317 |
| BmiI | GGNNCC | 1 cut(s) | 912 |
| BmrFI | CCNGG | 2 cut(s) | 429, 557 |
| BmsI | GCATC | 4 cut(s) | 289, 340, 364, 367 |
| BpmI | CTGGAG | 3 cut(s) | 163, 599, 1088 |
| BpuEI | CTTGAG | 1 cut(s) | 676 |
| BpuMI | CCSGG | 1 cut(s) | 557 |
| BsaBI | GATNNNNATC | 2 cut(s) | 354, 795 |
| BsaI | GGTCTC | 1 cut(s) | 604 |
| BsaJI | CCNNGG | 3 cut(s) | 427, 800, 862 |
| BsaWI | WCCGGW | 1 cut(s) | 613 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 266, 434, 1118 |
| Bse1I | ACTGG | 2 cut(s) | 582, 899 |
| Bse3DI | GCAATG | 2 cut(s) | 53, 233 |
| Bse8I | GATNNNNATC | 2 cut(s) | 354, 795 |
| BseAI | TCCGGA | 1 cut(s) | 613 |
| BseBI | CCWGG | 1 cut(s) | 429 |
| BseDI | CCNNGG | 3 cut(s) | 427, 800, 862 |
| BseGI | GGATG | 1 cut(s) | 355 |
| BseJI | GATNNNNATC | 2 cut(s) | 354, 795 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 266, 434, 1118 |
| BseMI | GCAATG | 2 cut(s) | 53, 233 |
| BseNI | ACTGG | 2 cut(s) | 582, 899 |
| BseRI | GAGGAG | 1 cut(s) | 993 |
| BseSI | GKGCMC | 2 cut(s) | 194, 681 |
| BseXI | GCAGC | 5 cut(s) | 37, 259, 793, 931, 1010 |
| Bsh1285I | CGRYCG | 1 cut(s) | 561 |
| BsiEI | CGRYCG | 1 cut(s) | 561 |
| BsiHKAI | GWGCWC | 1 cut(s) | 662 |
| BsiHKCI | CYCGRG | 1 cut(s) | 786 |
| BsiSI | CCGG | 2 cut(s) | 557, 614 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 266, 434, 1118 |
| BsmAI | GTCTC | 2 cut(s) | 604, 784 |
| BsmI | GAATGC | 2 cut(s) | 1128, 1183 |
| Bso31I | GGTCTC | 1 cut(s) | 604 |
| BsoBI | CYCGRG | 1 cut(s) | 786 |
| Bsp1286I | GDGCHC | 3 cut(s) | 194, 662, 681 |
| Bsp13I | TCCGGA | 1 cut(s) | 613 |
| Bsp143I | GATC | 7 cut(s) | 25, 146, 166, 625, 790, 910, 1063 |
| BspACI | CCGC | 3 cut(s) | 359, 744, 1088 |
| BspEI | TCCGGA | 1 cut(s) | 613 |
| BspHI | TCATGA | 1 cut(s) | 328 |
| BspLI | GGNNCC | 1 cut(s) | 912 |
| BspPI | GGATC | 2 cut(s) | 905, 918 |
| BspQI | GCTCTTC | 1 cut(s) | 816 |
| BspTNI | GGTCTC | 1 cut(s) | 604 |
| BsrDI | GCAATG | 2 cut(s) | 53, 233 |
| BsrI | ACTGG | 2 cut(s) | 582, 899 |
| BssECI | CCNNGG | 3 cut(s) | 427, 800, 862 |
| BssMI | GATC | 7 cut(s) | 25, 146, 166, 625, 790, 910, 1063 |
| BssSI | CACGAG | 1 cut(s) | 954 |
| BssT1I | CCWWGG | 1 cut(s) | 800 |
| Bst2BI | CACGAG | 1 cut(s) | 954 |
| Bst2UI | CCWGG | 1 cut(s) | 429 |
| Bst4CI | ACNGT | 7 cut(s) | 317, 491, 668, 827, 863, 890, 1020 |
| Bst6I | CTCTTC | 2 cut(s) | 399, 816 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 59 |
| BstC8I | GCNNGC | 3 cut(s) | 60, 230, 1090 |
| BstDSI | CCRYGG | 1 cut(s) | 862 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 264 |
| BstF5I | GGATG | 1 cut(s) | 355 |
| BstHHI | GCGC | 2 cut(s) | 355, 870 |
| BstKTI | GATC | 7 cut(s) | 28, 149, 169, 628, 793, 913, 1066 |
| BstMAI | GTCTC | 2 cut(s) | 604, 784 |
| BstMBI | GATC | 7 cut(s) | 25, 146, 166, 625, 790, 910, 1063 |
| BstMCI | CGRYCG | 1 cut(s) | 561 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 59, 229, 685, 928 |
| BstNI | CCWGG | 1 cut(s) | 429 |
| BstNSI | RCATGY | 3 cut(s) | 190, 529, 935 |
| BstSCI | CCNGG | 2 cut(s) | 427, 555 |
| BstSLI | GKGCMC | 2 cut(s) | 194, 681 |
| BstV1I | GCAGC | 5 cut(s) | 37, 259, 793, 931, 1010 |
| BstX2I | RGATCY | 2 cut(s) | 910, 1063 |
| BstYI | RGATCY | 2 cut(s) | 910, 1063 |
| BtgI | CCRYGG | 1 cut(s) | 862 |
| BtsCI | GGATG | 1 cut(s) | 355 |
| BtsI | GCAGTG | 1 cut(s) | 768 |
| BtsIMutI | CAGTG | 3 cut(s) | 575, 673, 768 |
| Cac8I | GCNNGC | 3 cut(s) | 60, 230, 1090 |
| CciI | TCATGA | 1 cut(s) | 328 |
| CfoI | GCGC | 2 cut(s) | 355, 870 |
| Cfr13I | GGNCC | 1 cut(s) | 317 |
| Csp6I | GTAC | 1 cut(s) | 424 |
| CviAII | CATG | 9 cut(s) | 187, 224, 250, 329, 457, 526, 619, 932, 1093 |
| CviQI | GTAC | 1 cut(s) | 424 |
| DpnI | GATC | 7 cut(s) | 27, 148, 168, 627, 792, 912, 1065 |
| DpnII | GATC | 7 cut(s) | 25, 146, 166, 625, 790, 910, 1063 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 502 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 502 |
| Eam1104I | CTCTTC | 2 cut(s) | 399, 816 |
| EarI | CTCTTC | 2 cut(s) | 399, 816 |
| Eco130I | CCWWGG | 1 cut(s) | 800 |
| Eco31I | GGTCTC | 1 cut(s) | 604 |
| Eco47I | GGWCC | 1 cut(s) | 317 |
| Eco88I | CYCGRG | 1 cut(s) | 786 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 264 |
| EcoRII | CCWGG | 1 cut(s) | 427 |
| EcoT14I | CCWWGG | 1 cut(s) | 800 |
| EcoT22I | ATGCAT | 1 cut(s) | 1183 |
| ErhI | CCWWGG | 1 cut(s) | 800 |
| FaeI | CATG | 9 cut(s) | 190, 227, 253, 332, 460, 529, 622, 935, 1096 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 156, 188 |
| FatI | CATG | 9 cut(s) | 186, 223, 249, 328, 456, 525, 618, 931, 1092 |
| FauI | CCCGC | 1 cut(s) | 1081 |
| Fnu4HI | GCNGC | 5 cut(s) | 51, 273, 807, 920, 999 |
| FokI | GGATG | 1 cut(s) | 342 |
| Fsp4HI | GCNGC | 5 cut(s) | 51, 273, 807, 920, 999 |
| FspAI | RTGCGCAY | 1 cut(s) | 354 |
| FspBI | CTAG | 2 cut(s) | 90, 321 |
| FspI | TGCGCA | 1 cut(s) | 354 |
| GlaI | GCGC | 2 cut(s) | 354, 869 |
| GluI | GCNGC | 5 cut(s) | 51, 273, 807, 920, 999 |
| GsuI | CTGGAG | 3 cut(s) | 163, 599, 1088 |
| HapII | CCGG | 2 cut(s) | 557, 614 |
| HhaI | GCGC | 2 cut(s) | 355, 870 |
| Hin1II | CATG | 9 cut(s) | 190, 227, 253, 332, 460, 529, 622, 935, 1096 |
| Hin6I | GCGC | 2 cut(s) | 353, 868 |
| HinP1I | GCGC | 2 cut(s) | 353, 868 |
| HinfI | GANTC | 1 cut(s) | 1096 |
| HpaII | CCGG | 2 cut(s) | 557, 614 |
| HphI | GGTGA | 3 cut(s) | 141, 851, 1150 |
| HpyAV | CCTTC | 3 cut(s) | 900, 1129, 1172 |
| HpyCH4III | ACNGT | 7 cut(s) | 317, 491, 668, 827, 863, 890, 1020 |
| HpyCH4IV | ACGT | 1 cut(s) | 1185 |
| HpyCH4V | TGCA | 8 cut(s) | 53, 62, 238, 313, 463, 715, 938, 1181 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 59, 229, 685, 928 |
| HpySE526I | ACGT | 1 cut(s) | 1185 |
| Hsp92II | CATG | 9 cut(s) | 190, 227, 253, 332, 460, 529, 622, 935, 1096 |
| HspAI | GCGC | 2 cut(s) | 353, 868 |
| Kpn2I | TCCGGA | 1 cut(s) | 613 |
| Kzo9I | GATC | 7 cut(s) | 25, 146, 166, 625, 790, 910, 1063 |
| LguI | GCTCTTC | 1 cut(s) | 816 |
| LmnI | GCTCC | 2 cut(s) | 297, 1006 |
| Lsp1109I | GCAGC | 5 cut(s) | 37, 259, 793, 931, 1010 |
| LweI | GCATC | 4 cut(s) | 289, 340, 364, 367 |
| MaeI | CTAG | 2 cut(s) | 90, 321 |
| MaeII | ACGT | 1 cut(s) | 1185 |
| MaeIII | GTNAC | 6 cut(s) | 128, 245, 562, 890, 974, 1020 |
| MalI | GATC | 7 cut(s) | 27, 148, 168, 627, 792, 912, 1065 |
| MboI | GATC | 7 cut(s) | 25, 146, 166, 625, 790, 910, 1063 |
| MboII | GAAGA | 7 cut(s) | 194, 356, 359, 416, 779, 803, 1049 |
| MfeI | CAATTG | 2 cut(s) | 133, 239 |
| MflI | RGATCY | 2 cut(s) | 910, 1063 |
| MhlI | GDGCHC | 3 cut(s) | 194, 662, 681 |
| MlyI | GAGTC | 1 cut(s) | 1090 |
| MmeI | TCCRAC | 2 cut(s) | 473, 1053 |
| MnlI | CCTC | 9 cut(s) | 91, 151, 270, 377, 400, 574, 702, 750, 1014 |
| Mph1103I | ATGCAT | 1 cut(s) | 1183 |
| MroI | TCCGGA | 1 cut(s) | 613 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1041 |
| MseI | TTAA | 2 cut(s) | 174, 530 |
| MslI | CAYNNNNRTG | 1 cut(s) | 333 |
| MspI | CCGG | 2 cut(s) | 557, 614 |
| MspR9I | CCNGG | 2 cut(s) | 429, 557 |
| MunI | CAATTG | 2 cut(s) | 133, 239 |
| Mva1269I | GAATGC | 2 cut(s) | 1128, 1183 |
| MvaI | CCWGG | 1 cut(s) | 429 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 59, 229, 685, 928 |
| NciI | CCSGG | 1 cut(s) | 557 |
| NdeII | GATC | 7 cut(s) | 25, 146, 166, 625, 790, 910, 1063 |
| NlaIII | CATG | 9 cut(s) | 190, 227, 253, 332, 460, 529, 622, 935, 1096 |
| NlaIV | GGNNCC | 1 cut(s) | 912 |
| NmuCI | GTSAC | 1 cut(s) | 890 |
| NsbI | TGCGCA | 1 cut(s) | 354 |
| NsiI | ATGCAT | 1 cut(s) | 1183 |
| NspI | RCATGY | 3 cut(s) | 190, 529, 935 |
| PaeR7I | CTCGAG | 1 cut(s) | 786 |
| PagI | TCATGA | 1 cut(s) | 328 |
| PciI | ACATGT | 1 cut(s) | 525 |
| PciSI | GCTCTTC | 1 cut(s) | 816 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 681 |
| PctI | GAATGC | 2 cut(s) | 1128, 1183 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1041 |
| PflFI | GACNNNGTC | 1 cut(s) | 557 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 434 |
| PkrI | GCNGC | 5 cut(s) | 52, 274, 808, 921, 1000 |
| PleI | GAGTC | 1 cut(s) | 1090 |
| PpsI | GAGTC | 1 cut(s) | 1090 |
| PscI | ACATGT | 1 cut(s) | 525 |
| Psp6I | CCWGG | 1 cut(s) | 427 |
| PspGI | CCWGG | 1 cut(s) | 427 |
| PspN4I | GGNNCC | 1 cut(s) | 912 |
| PspPI | GGNCC | 1 cut(s) | 317 |
| PsuI | RGATCY | 2 cut(s) | 910, 1063 |
| PsyI | GACNNNGTC | 1 cut(s) | 557 |
| RsaI | GTAC | 1 cut(s) | 425 |
| RsaNI | GTAC | 1 cut(s) | 424 |
| RseI | CAYNNNNRTG | 1 cut(s) | 333 |
| SapI | GCTCTTC | 1 cut(s) | 816 |
| SaqAI | TTAA | 2 cut(s) | 174, 530 |
| SatI | GCNGC | 5 cut(s) | 51, 273, 807, 920, 999 |
| Sau3AI | GATC | 7 cut(s) | 25, 146, 166, 625, 790, 910, 1063 |
| Sau96I | GGNCC | 1 cut(s) | 317 |
| SchI | GAGTC | 1 cut(s) | 1090 |
| ScrFI | CCNGG | 2 cut(s) | 429, 557 |
| SduI | GDGCHC | 3 cut(s) | 194, 662, 681 |
| SfaNI | GCATC | 4 cut(s) | 289, 340, 364, 367 |
| Sfr274I | CTCGAG | 1 cut(s) | 786 |
| SinI | GGWCC | 1 cut(s) | 317 |
| SlaI | CTCGAG | 1 cut(s) | 786 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 333 |
| SmlI | CTYRAG | 2 cut(s) | 655, 786 |
| SmoI | CTYRAG | 2 cut(s) | 655, 786 |
| SsiI | CCGC | 3 cut(s) | 359, 744, 1088 |
| SspMI | CTAG | 2 cut(s) | 90, 321 |
| StyD4I | CCNGG | 2 cut(s) | 427, 555 |
| StyI | CCWWGG | 1 cut(s) | 800 |
| TaaI | ACNGT | 7 cut(s) | 317, 491, 668, 827, 863, 890, 1020 |
| TaiI | ACGT | 1 cut(s) | 1188 |
| TaqI | TCGA | 3 cut(s) | 684, 787, 885 |
| Tru1I | TTAA | 2 cut(s) | 174, 530 |
| Tru9I | TTAA | 2 cut(s) | 174, 530 |
| TscAI | CASTG | 3 cut(s) | 582, 673, 768 |
| TseFI | GTSAC | 1 cut(s) | 890 |
| TseI | GCWGC | 5 cut(s) | 50, 272, 806, 919, 998 |
| Tsp45I | GTSAC | 1 cut(s) | 890 |
| TspDTI | ATGAA | 5 cut(s) | 194, 445, 640, 998, 1154 |
| TspRI | CASTG | 3 cut(s) | 582, 673, 768 |
| Tth111I | GACNNNGTC | 1 cut(s) | 557 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 434 |
| VpaK11BI | GGWCC | 1 cut(s) | 317 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 264 |
| XapI | RAATTY | 3 cut(s) | 386, 1009, 1191 |
| XceI | RCATGY | 3 cut(s) | 190, 529, 935 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 302 |
| XhoI | CTCGAG | 1 cut(s) | 786 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1041 |
| XspI | CTAG | 2 cut(s) | 90, 321 |
| Zsp2I | ATGCAT | 1 cut(s) | 1183 |