source UniProtKB
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 899 |
| Acc65I | GGTACC | 1 cut(s) | 1030 |
| AccB1I | GGYRCC | 2 cut(s) | 179, 1030 |
| AciI | CCGC | 1 cut(s) | 1003 |
| AclWI | GGATC | 1 cut(s) | 494 |
| AcsI | RAATTY | 5 cut(s) | 343, 472, 931, 1085, 1223 |
| AcuI | CTGAAG | 1 cut(s) | 93 |
| AcyI | GRCGYC | 1 cut(s) | 896 |
| AfaI | GTAC | 3 cut(s) | 1032, 1112, 1233 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 122, 1126 |
| AflII | CTTAAG | 1 cut(s) | 107 |
| AgsI | TTSAA | 7 cut(s) | 13, 478, 635, 756, 805, 904, 1090 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 105, 137 |
| AleI | CACNNNNGTG | 1 cut(s) | 1075 |
| AluBI | AGCT | 7 cut(s) | 211, 217, 390, 1067, 1099, 1160, 1205 |
| AluI | AGCT | 7 cut(s) | 211, 217, 390, 1067, 1099, 1160, 1205 |
| Alw26I | GTCTC | 2 cut(s) | 307, 1188 |
| AlwI | GGATC | 1 cut(s) | 494 |
| AoxI | GGCC | 1 cut(s) | 257 |
| ApeKI | GCWGC | 5 cut(s) | 211, 214, 767, 986, 989 |
| ApoI | RAATTY | 5 cut(s) | 343, 472, 931, 1085, 1223 |
| Asp718I | GGTACC | 1 cut(s) | 1030 |
| AspS9I | GGNCC | 3 cut(s) | 194, 258, 1054 |
| AsuHPI | GGTGA | 5 cut(s) | 277, 620, 707, 737, 870 |
| AvaII | GGWCC | 2 cut(s) | 194, 1054 |
| BanI | GGYRCC | 2 cut(s) | 179, 1030 |
| BauI | CACGAG | 1 cut(s) | 813 |
| BbvI | GCAGC | 5 cut(s) | 198, 226, 754, 973, 1001 |
| BccI | CCATC | 3 cut(s) | 686, 716, 1012 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 127, 161, 879, 913 |
| BciVI | GTATCC | 1 cut(s) | 1161 |
| BcoDI | GTCTC | 2 cut(s) | 307, 1188 |
| BfaI | CTAG | 4 cut(s) | 41, 299, 306, 774 |
| BfmI | CTRYAG | 3 cut(s) | 212, 681, 987 |
| BfrI | CTTAAG | 1 cut(s) | 107 |
| BfuI | GTATCC | 1 cut(s) | 1161 |
| BisI | GCNGC | 5 cut(s) | 212, 215, 768, 987, 990 |
| BlsI | GCNGC | 5 cut(s) | 213, 216, 769, 988, 991 |
| Bme18I | GGWCC | 2 cut(s) | 194, 1054 |
| BmgT120I | GGNCC | 3 cut(s) | 194, 258, 1054 |
| BmiI | GGNNCC | 4 cut(s) | 114, 181, 399, 1032 |
| BmrI | ACTGGG | 1 cut(s) | 320 |
| BmsI | GCATC | 2 cut(s) | 646, 869 |
| BmuI | ACTGGG | 1 cut(s) | 320 |
| Bpu10I | CCTNAGC | 1 cut(s) | 911 |
| BpuEI | CTTGAG | 1 cut(s) | 659 |
| Bsa29I | ATCGAT | 1 cut(s) | 1210 |
| BsaHI | GRCGYC | 1 cut(s) | 896 |
| BsaJI | CCNNGG | 2 cut(s) | 601, 1043 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 652, 682 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 122, 1126 |
| Bse1I | ACTGG | 1 cut(s) | 326 |
| Bse3DI | GCAATG | 3 cut(s) | 51, 300, 897 |
| BseCI | ATCGAT | 1 cut(s) | 1210 |
| BseDI | CCNNGG | 2 cut(s) | 601, 1043 |
| BseGI | GGATG | 4 cut(s) | 727, 1023, 1116, 1135 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 122, 1126 |
| BseMI | GCAATG | 3 cut(s) | 51, 300, 897 |
| BseMII | CTCAG | 2 cut(s) | 48, 1209 |
| BseNI | ACTGG | 1 cut(s) | 326 |
| BseRI | GAGGAG | 1 cut(s) | 632 |
| BseXI | GCAGC | 5 cut(s) | 198, 226, 754, 973, 1001 |
| BseYI | CCCAGC | 1 cut(s) | 1156 |
| BsgI | GTGCAG | 1 cut(s) | 810 |
| BshFI | GGCC | 1 cut(s) | 259 |
| BshNI | GGYRCC | 2 cut(s) | 179, 1030 |
| BshVI | ATCGAT | 1 cut(s) | 1210 |
| BslFI | GGGAC | 1 cut(s) | 1205 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 122, 1126 |
| BsmAI | GTCTC | 2 cut(s) | 307, 1188 |
| BsmFI | GGGAC | 1 cut(s) | 1205 |
| BsmI | GAATGC | 1 cut(s) | 167 |
| BsnI | GGCC | 1 cut(s) | 259 |
| Bsp143I | GATC | 2 cut(s) | 499, 1207 |
| Bsp19I | CCATGG | 1 cut(s) | 601 |
| BspACI | CCGC | 1 cut(s) | 1003 |
| BspANI | GGCC | 1 cut(s) | 259 |
| BspCNI | CTCAG | 2 cut(s) | 49, 1210 |
| BspDI | ATCGAT | 1 cut(s) | 1210 |
| BspLI | GGNNCC | 4 cut(s) | 114, 181, 399, 1032 |
| BspMAI | CTGCAG | 2 cut(s) | 216, 991 |
| BspPI | GGATC | 1 cut(s) | 494 |
| BspT107I | GGYRCC | 2 cut(s) | 179, 1030 |
| BspTI | CTTAAG | 1 cut(s) | 107 |
| BsrDI | GCAATG | 3 cut(s) | 51, 300, 897 |
| BsrI | ACTGG | 1 cut(s) | 326 |
| BssECI | CCNNGG | 2 cut(s) | 601, 1043 |
| BssMI | GATC | 2 cut(s) | 499, 1207 |
| BssNI | GRCGYC | 1 cut(s) | 896 |
| BssSI | CACGAG | 1 cut(s) | 813 |
| BssT1I | CCWWGG | 2 cut(s) | 601, 1043 |
| Bst2BI | CACGAG | 1 cut(s) | 813 |
| Bst4CI | ACNGT | 3 cut(s) | 121, 1110, 1143 |
| BstACI | GRCGYC | 1 cut(s) | 896 |
| BstAFI | CTTAAG | 1 cut(s) | 107 |
| BstC8I | GCNNGC | 1 cut(s) | 1097 |
| BstDEI | CTNAG | 3 cut(s) | 57, 911, 1218 |
| BstDSI | CCRYGG | 1 cut(s) | 601 |
| BstEII | GGTNACC | 1 cut(s) | 695 |
| BstF5I | GGATG | 4 cut(s) | 727, 1023, 1116, 1135 |
| BstKTI | GATC | 2 cut(s) | 502, 1210 |
| BstMAI | GTCTC | 2 cut(s) | 307, 1188 |
| BstMBI | GATC | 2 cut(s) | 499, 1207 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 77, 776, 824 |
| BstPI | GGTNACC | 1 cut(s) | 695 |
| BstSFI | CTRYAG | 3 cut(s) | 212, 681, 987 |
| BstV1I | GCAGC | 5 cut(s) | 198, 226, 754, 973, 1001 |
| Bsu15I | ATCGAT | 1 cut(s) | 1210 |
| BsuI | GTATCC | 1 cut(s) | 1161 |
| BsuRI | GGCC | 1 cut(s) | 259 |
| BsuTUI | ATCGAT | 1 cut(s) | 1210 |
| BtgI | CCRYGG | 1 cut(s) | 601 |
| BtgZI | GCGATG | 1 cut(s) | 52 |
| BtsCI | GGATG | 4 cut(s) | 727, 1023, 1116, 1135 |
| Cac8I | GCNNGC | 1 cut(s) | 1097 |
| Cfr13I | GGNCC | 3 cut(s) | 194, 258, 1054 |
| ClaI | ATCGAT | 1 cut(s) | 1210 |
| Csp6I | GTAC | 3 cut(s) | 1031, 1111, 1232 |
| CviAII | CATG | 2 cut(s) | 454, 602 |
| CviQI | GTAC | 3 cut(s) | 1031, 1111, 1232 |
| DdeI | CTNAG | 3 cut(s) | 57, 911, 1218 |
| DpnI | GATC | 2 cut(s) | 501, 1209 |
| DpnII | GATC | 2 cut(s) | 499, 1207 |
| Eco130I | CCWWGG | 2 cut(s) | 601, 1043 |
| Eco47I | GGWCC | 2 cut(s) | 194, 1054 |
| Eco57I | CTGAAG | 1 cut(s) | 93 |
| Eco91I | GGTNACC | 1 cut(s) | 695 |
| EcoO109I | RGGNCCY | 1 cut(s) | 258 |
| EcoO65I | GGTNACC | 1 cut(s) | 695 |
| EcoRI | GAATTC | 1 cut(s) | 1085 |
| EcoT14I | CCWWGG | 2 cut(s) | 601, 1043 |
| EcoT22I | ATGCAT | 2 cut(s) | 802, 862 |
| ErhI | CCWWGG | 2 cut(s) | 601, 1043 |
| FaeI | CATG | 2 cut(s) | 457, 605 |
| FaqI | GGGAC | 1 cut(s) | 1205 |
| FatI | CATG | 2 cut(s) | 453, 601 |
| Fnu4HI | GCNGC | 5 cut(s) | 212, 215, 768, 987, 990 |
| FokI | GGATG | 4 cut(s) | 734, 1030, 1103, 1142 |
| Fsp4HI | GCNGC | 5 cut(s) | 212, 215, 768, 987, 990 |
| FspBI | CTAG | 4 cut(s) | 41, 299, 306, 774 |
| GluI | GCNGC | 5 cut(s) | 212, 215, 768, 987, 990 |
| GsaI | CCCAGC | 1 cut(s) | 1160 |
| HaeIII | GGCC | 1 cut(s) | 259 |
| Hin1I | GRCGYC | 1 cut(s) | 896 |
| Hin1II | CATG | 2 cut(s) | 457, 605 |
| HincII | GTYRAC | 1 cut(s) | 424 |
| HindII | GTYRAC | 1 cut(s) | 424 |
| HinfI | GANTC | 4 cut(s) | 59, 354, 531, 627 |
| HphI | GGTGA | 5 cut(s) | 277, 620, 707, 737, 870 |
| Hpy166II | GTNNAC | 3 cut(s) | 35, 285, 424 |
| Hpy188I | TCNGA | 3 cut(s) | 865, 966, 1219 |
| Hpy188III | TCNNGA | 5 cut(s) | 41, 587, 719, 1090, 1177 |
| Hpy8I | GTNNAC | 3 cut(s) | 35, 285, 424 |
| Hpy99I | CGWCG | 1 cut(s) | 901 |
| HpyAV | CCTTC | 4 cut(s) | 7, 38, 919, 961 |
| HpyCH4III | ACNGT | 3 cut(s) | 121, 1110, 1143 |
| HpyCH4IV | ACGT | 1 cut(s) | 896 |
| HpyCH4V | TGCA | 9 cut(s) | 51, 165, 214, 238, 293, 800, 827, 860, 989 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 77, 776, 824 |
| HpyF3I | CTNAG | 3 cut(s) | 57, 911, 1218 |
| HpySE526I | ACGT | 1 cut(s) | 896 |
| Hsp92I | GRCGYC | 1 cut(s) | 896 |
| Hsp92II | CATG | 2 cut(s) | 457, 605 |
| KpnI | GGTACC | 1 cut(s) | 1034 |
| Kzo9I | GATC | 2 cut(s) | 499, 1207 |
| LpnPI | CCDG | 7 cut(s) | 339, 600, 831, 1050, 1149, 1170, 1214 |
| Lsp1109I | GCAGC | 5 cut(s) | 198, 226, 754, 973, 1001 |
| LweI | GCATC | 2 cut(s) | 646, 869 |
| MaeI | CTAG | 4 cut(s) | 41, 299, 306, 774 |
| MaeII | ACGT | 1 cut(s) | 896 |
| MaeIII | GTNAC | 3 cut(s) | 695, 725, 808 |
| MalI | GATC | 2 cut(s) | 501, 1209 |
| MboI | GATC | 2 cut(s) | 499, 1207 |
| MboII | GAAGA | 1 cut(s) | 86 |
| MlyI | GAGTC | 4 cut(s) | 68, 363, 540, 636 |
| MmeI | TCCRAC | 2 cut(s) | 103, 604 |
| MnlI | CCTC | 9 cut(s) | 151, 306, 561, 610, 613, 678, 813, 1021, 1213 |
| Mph1103I | ATGCAT | 2 cut(s) | 802, 862 |
| MseI | TTAA | 7 cut(s) | 108, 267, 330, 360, 495, 555, 960 |
| MslI | CAYNNNNRTG | 5 cut(s) | 228, 495, 606, 1075, 1128 |
| MspA1I | CMGCKG | 1 cut(s) | 1160 |
| MspCI | CTTAAG | 1 cut(s) | 107 |
| Mva1269I | GAATGC | 1 cut(s) | 167 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 77, 776, 824 |
| NcoI | CCATGG | 1 cut(s) | 601 |
| NdeII | GATC | 2 cut(s) | 499, 1207 |
| NlaIII | CATG | 2 cut(s) | 457, 605 |
| NlaIV | GGNNCC | 4 cut(s) | 114, 181, 399, 1032 |
| NmuCI | GTSAC | 3 cut(s) | 695, 725, 808 |
| NsiI | ATGCAT | 2 cut(s) | 802, 862 |
| OliI | CACNNNNGTG | 1 cut(s) | 1075 |
| PctI | GAATGC | 1 cut(s) | 167 |
| PkrI | GCNGC | 5 cut(s) | 213, 216, 769, 988, 991 |
| PleI | GAGTC | 4 cut(s) | 67, 362, 539, 635 |
| PpsI | GAGTC | 4 cut(s) | 67, 362, 539, 635 |
| PspEI | GGTNACC | 1 cut(s) | 695 |
| PspFI | CCCAGC | 1 cut(s) | 1156 |
| PspN4I | GGNNCC | 4 cut(s) | 114, 181, 399, 1032 |
| PspPI | GGNCC | 3 cut(s) | 194, 258, 1054 |
| PstI | CTGCAG | 2 cut(s) | 216, 991 |
| PvuII | CAGCTG | 1 cut(s) | 1160 |
| RsaI | GTAC | 3 cut(s) | 1032, 1112, 1233 |
| RsaNI | GTAC | 3 cut(s) | 1031, 1111, 1232 |
| RseI | CAYNNNNRTG | 5 cut(s) | 228, 495, 606, 1075, 1128 |
| SaqAI | TTAA | 7 cut(s) | 108, 267, 330, 360, 495, 555, 960 |
| SatI | GCNGC | 5 cut(s) | 212, 215, 768, 987, 990 |
| Sau3AI | GATC | 2 cut(s) | 499, 1207 |
| Sau96I | GGNCC | 3 cut(s) | 194, 258, 1054 |
| SchI | GAGTC | 4 cut(s) | 68, 363, 540, 636 |
| SfaNI | GCATC | 2 cut(s) | 646, 869 |
| SfcI | CTRYAG | 3 cut(s) | 212, 681, 987 |
| SinI | GGWCC | 2 cut(s) | 194, 1054 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 228, 495, 606, 1075, 1128 |
| SmlI | CTYRAG | 2 cut(s) | 107, 638 |
| SmoI | CTYRAG | 2 cut(s) | 107, 638 |
| SsiI | CCGC | 1 cut(s) | 1003 |
| SspI | AATATT | 1 cut(s) | 790 |
| SspMI | CTAG | 4 cut(s) | 41, 299, 306, 774 |
| StyI | CCWWGG | 2 cut(s) | 601, 1043 |
| TaaI | ACNGT | 3 cut(s) | 121, 1110, 1143 |
| TaiI | ACGT | 1 cut(s) | 899 |
| TaqI | TCGA | 3 cut(s) | 147, 1176, 1210 |
| TaqII | GACCGA | 1 cut(s) | 182 |
| TatI | WGTACW | 1 cut(s) | 1110 |
| Tru1I | TTAA | 7 cut(s) | 108, 267, 330, 360, 495, 555, 960 |
| Tru9I | TTAA | 7 cut(s) | 108, 267, 330, 360, 495, 555, 960 |
| TseFI | GTSAC | 3 cut(s) | 695, 725, 808 |
| TseI | GCWGC | 5 cut(s) | 211, 214, 767, 986, 989 |
| Tsp45I | GTSAC | 3 cut(s) | 695, 725, 808 |
| TspDTI | ATGAA | 6 cut(s) | 17, 264, 267, 356, 1146, 1162 |
| Vha464I | CTTAAG | 1 cut(s) | 107 |
| VpaK11BI | GGWCC | 2 cut(s) | 194, 1054 |
| XapI | RAATTY | 5 cut(s) | 343, 472, 931, 1085, 1223 |
| XbaI | TCTAGA | 1 cut(s) | 40 |
| XspI | CTAG | 4 cut(s) | 41, 299, 306, 774 |
| ZraI | GACGTC | 1 cut(s) | 897 |
| Zsp2I | ATGCAT | 2 cut(s) | 802, 862 |