FvH4_7g17991

Domain of unknown function (DUF4218)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000015
Physical Location & Seq
Forward (+)
15120899 .. 15124305
3407 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g17991.t1

Sequence Viewer

Length: 3234 bp
ATGCATCGATTTCCCATTGACAAAGTATGGCAGCACCTGAGGAGTAACGGGTTTTGGGAGAAGTACACATGTTGGTTATATCACGGTGAAACATCATCAGGGGGTCCGCATGATCATGGCCAATTTTCTGAGACAGGCAGTACATCCAACGATCCAACAATGGCATTCATCAACGACATGTTTCCTTATGAGAGCGGTGTATGCGCTCAAGGACAGTATATGCCTGACCCGGTGCAGCCCTTCCCTACAGCTGTTAACACTGCTGGTATTGAAAAGTACAACAAACTGCTTGCTTTCCAACAGACCCCTGTGTACCCCGGTTGTCAGAAGACCGTTCTTGAAAGTGTGATGGACGTAATGAAGATTAAAGTTGAGACAAAATCGACCGTGAAGGCTGTTGATGATTATCTACAGTACACTGCTTCGATGCTGCCCCACGGTCATCGTCTTCCTACCACTCATCGTAAGGTCCGATGTATCCTGAAAGATCTTGGGCTTTCCTACATCAAGATCCATGCATGCAGATATGACTGCGTTCTCTTTTGGGGTAAAGATCCAGAAGGGAATGACCTTGGTGGCCTTGACGCATGTCCGGTATGTCACACTGACAGGTATAAGCTGACTCCTGCAGGCAACAGGAAACCTGTAAAGGTACTTCGGTATTTCCCTTTGAGGGATAGGTTGGAGCGGTTGTACATGTCTTCACACACGGCCGAAGCTATGAGATGGCACGCTGATAGGGAATTGCATGACGAAGATACCCTTATACACCCTGCTGACGGGGAGGCTTGGACGCATACAGACAGTGAGTTTCCTCATTTTGCGTCAGAGGTCCGAAATGTGAGGCTCGGGCTCTCATCCGACGGGTTCAACCCTTTTGGCAACATGAGTCTTCAATACAGTGTATGGCCGGTGATTTTGGTACCGTACAACCTTCCTCCATGGATGTGCATGAAGAAGGAATACAATATGTTGAGTTTGTTGATCCCGGGGCCCGGTTATCCAGGGAAGTGTCTCGATGTGTATTTGAGACCTTTGATTGAAGAGCTTAAATTTTTGTGGGACGTTGGTCATCCCACTTATGACAAGTACACGCACGAGATGTTCCAGATGCATGTCATGGTTGTTGGTACCATCAGTGATTTTCCTGCCCGTGGGATGTTGTCGGGCAACGTTGTTAGGGGATACAAGGCTTGTCCAGAGTGCCTTAGCGATGAGGGGAGCAGCAGTCATTGCAACAAGATATGCAGATTGGGTCACCGTGCTTTCCTTCCATATAATCATGAATGGCGGTTCGATGAAAAGACATTTGATGGGACCGTAGAACACGGTGTGGCTCCCAGAAGATGGACGGGGGAAGAAATTTTAGCAGTGCTTAATGAGTACGATTTTGGGCAGCTCAGCAATCATCCCAACATTGTGGCGGCAATACCTGAAAGACCCGACAGGTACAAATTCTGGACACATAAGAGCATATTCTGGGAACTCACATACTGGAGTAAGTTGTTGATCAGGCACTACCTAGATGTGATGCACATAGAAAAGAATGTTTGCGACAGTGTGGTGGGCACAGTGCTGAACTTGGAGGGGAAGACGAAAGACGGTCCTGAGGCACGCATTGATCTAAAAAAAATGCAATTAAGAAGACATCTGTGGTTGAAAGAAGGGAAGAAAAAAATGTCTCAAGCTCCTTACACCGTGAAGCCTGACCAGAAGAACCTAATTTTCAGGTGGATGAGTTGTGTGAAGTATCCTTCAGGCTATGCAGGAAATATAGCCCGGTGTGTGAACTTCCGGGACAATAAGATGTACGGGTTGAAGAGTCATGACTGTCATATCCTGCTACGACGTCTCTTCCCTGTTTTCATTCGACCGTTCCTTCCCCGTCAGGTGGTGGAGCCGTTAGTAGCGTTGGCAAGATTCTTCCAGAAGTTATGCACACGGGAAGTGAAAAAATCTAACCTCCGGGAAATGCAAGAGGACATCATTTATATCATGTGTAAATTTGAGAGGATATTTCCTCCAAATTTTTTTGACATCATGCCTCACCTGATGATCCATCTTCCCGAGCAATTGTTGCTTACCGGTCCAGTACACTACACTTGGATGTATCCCATGGAAATGCAACTTGGAGACTACAAAGATTATGAGGCTAATAAATCCACGCCTGAAGGATGTATAGCTGAAGCATATATTGCGCACGAGTGCGTCACCTACATGAAGTTGTATTTAGGAGCGTTGAAGGAAACAGACGAAGCCATGCCGGTAGATGTACCGAAGTTCAATCTTTCCATACTCTCCAGTGATGTTGAAGTTTATGGAATTTTGCCAGACTCCTACAAGTTGCAACCACATGAGCTAGTCATTGCCCACTGGTGGGTATTGATTAACTGTCCAGAAGTTGAATACTGGAAAGACATCCATCTATATTGTCCAGACATTCAAGGTGATCTCGAGTACCACAACAGGGAGTTCGCAAATTATTTTGGCTGCTGGATGAACCATATTCAATTTGATGGTCACCCAAATTGGTCGCACGAACTAAGAATTCTAGCGATGAAGCCGATAATCTCAAGAGTTTATCCGATGTGCAAGGTGAATGGCGTGCAATTTATATGTGAACAGAGAGACAGCAGACAGAGAACACAGAATTCTGGGGTGATGGTGCATGGTGGGCGGAATGGAGTTGCCTATTACGGTGTTCTTGATTCAGTGGTGGAACTCGTTTATGGTGAAGGCATGACAGTGCACCTCTTCAAGTGTAGATGGTTTGATACTAGCCCGCAGAGCATGAAGACCGATCAGTACGGAATATTATCGGTGAACACTGCTACAAGTTCTTACGAAGATGACCCGTTCGTTTTTGCCACATCGGTAAAACAAGTGTTTTATCTTGATGACCTTGCTAAGGGTGACGCGTGGAAAGTAGTCAACCTTGTGCACCCTCGAAACATTTACCGGGCGGCTACACTTGGAGAGGCCGAAGACCAGGAAGAAGATGTTGCGTATCAAGAGCCCAACGCAATAGGTATTCCTAACTCCTCTACCGTTCGCCTTAATAATTTTAAAGCGGGTCGTTCGGTGCGAATTCGTGATGAAGAGCCAAGGCTTATTGATGTTGATCCAAATCAAGAAACAGACGAAGACTCTGGCGATGAGGAAAGGCATAGATTACCAGAAATTAATTCTGACACCGAAGAAGACTCATCGGATGATTCCGATTACGAGCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4216 DUF4218 Transposase_21

Protein Analysis

1078

Amino Acids

124.58

Weight (kDa)

5.99

Isoelectric Point (pI)

48.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_21 PF02992 254 - 460 2.6e-85 Transposase family tnp2
DUF4218 PF13960 645 - 747 5.9e-36 Domain of unknown function (DUF4218)
DUF4216 PF13952 907 - 977 2.5e-19 Domain of unknown function (DUF4216)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000015)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02311 FvH4_1g13961 FvH4_1g22120 FvH4_1g22121 FvH4_1g22122 FvH4_1g23803 FvH4_1g23921 FvH4_1g28422 FvH4_1g29232 FvH4_1g29711 FvH4_1g29805 FvH4_1g29806 FvH4_2g00032 FvH4_2g00812 FvH4_2g02271 FvH4_2g02272 FvH4_2g02785 FvH4_2g04944 FvH4_2g04945 FvH4_2g07143 FvH4_2g07144 FvH4_2g07753 FvH4_2g07991 FvH4_2g08941 FvH4_2g11271 FvH4_2g13851 FvH4_2g14771 FvH4_2g19023 FvH4_2g20441 FvH4_2g21542 FvH4_3g14320 FvH4_3g16301 FvH4_3g16302 FvH4_3g18963 FvH4_3g21083 FvH4_3g21361 FvH4_3g22001 FvH4_3g22111 FvH4_3g22562 FvH4_3g23523 FvH4_3g25312 FvH4_3g26061 FvH4_3g29331 FvH4_3g29831 FvH4_3g30391 FvH4_3g30443 FvH4_3g30614 FvH4_3g31714 FvH4_3g31743 FvH4_3g32192 FvH4_3g32261 FvH4_3g32804 FvH4_3g33044 FvH4_3g33045 FvH4_3g33093 FvH4_3g36581 FvH4_3g36582 FvH4_3g41971 FvH4_4g03322 FvH4_4g04242 FvH4_4g05702 FvH4_4g08648 FvH4_4g09213 FvH4_4g10051 FvH4_4g10253 FvH4_4g10471 FvH4_4g12773 FvH4_4g13831 FvH4_4g13832 FvH4_4g13891 FvH4_4g14282 FvH4_4g14283 FvH4_4g14443 FvH4_4g14562 FvH4_4g14563 FvH4_4g15322 FvH4_4g16172 FvH4_4g16174 FvH4_4g19121 FvH4_4g25941 FvH4_5g03061 FvH4_5g06092 FvH4_5g08081 FvH4_5g08082 FvH4_5g18422 FvH4_5g18423 FvH4_5g19272 FvH4_5g19471 FvH4_5g21221 FvH4_5g24272 FvH4_5g26171 FvH4_5g30952 FvH4_5g31512 FvH4_5g31513 FvH4_5g35083 FvH4_5g35211 FvH4_5g37211 FvH4_5g37212 FvH4_6g06671 FvH4_6g13841 FvH4_6g17381 FvH4_6g20142 FvH4_6g21813 FvH4_6g21900 FvH4_6g22901 FvH4_6g23254 FvH4_6g23352 FvH4_6g23592 FvH4_6g28112 FvH4_6g30093 FvH4_6g30771 FvH4_6g30772 FvH4_6g31292 FvH4_6g31483 FvH4_6g33071 FvH4_6g33481 FvH4_6g34821 FvH4_6g37043 FvH4_6g39685 FvH4_6g40311 FvH4_6g43082 FvH4_7g00291 FvH4_7g01731 FvH4_7g02153 FvH4_7g02991 FvH4_7g06091 FvH4_7g06092 FvH4_7g07224 FvH4_7g07901 FvH4_7g10641 FvH4_7g13281 FvH4_7g16902 FvH4_7g17991 FvH4_c18g00010
malus_domestica MD03G1146400.v1.1 MD12G1219800.v1.1
prunus_persica Prupe.6G012900_v2.0.a1 Prupe.6G136200_v2.0.a1
pyrus_communis pycom02g17950 pycom03g09510 pycom05g02880 pycom07g13380 pycom07g21950 pycom10g11450 pycom10g11460 pycom10g12890 pycom11g15000 pycom12646g00130 pycom13g21890 pycom17g19360
rosa_chinensis RchiOBHm_Chr1g0321891 RchiOBHm_Chr1g0321901 RchiOBHm_Chr1g0331761 RchiOBHm_Chr2g0084301 RchiOBHm_Chr2g0095191 RchiOBHm_Chr2g0111791 RchiOBHm_Chr2g0114991 RchiOBHm_Chr2g0127551 RchiOBHm_Chr2g0129601 RchiOBHm_Chr2g0133591 RchiOBHm_Chr2g0136601 RchiOBHm_Chr2g0143321 RchiOBHm_Chr3g0458241 RchiOBHm_Chr3g0483841 RchiOBHm_Chr3g0483851 RchiOBHm_Chr3g0495641 RchiOBHm_Chr4g0408001 RchiOBHm_Chr4g0414211 RchiOBHm_Chr4g0414221 RchiOBHm_Chr4g0415141 RchiOBHm_Chr4g0417061 RchiOBHm_Chr4g0421351 RchiOBHm_Chr4g0433621 RchiOBHm_Chr4g0436001 RchiOBHm_Chr5g0007671 RchiOBHm_Chr5g0020851 RchiOBHm_Chr5g0024741 RchiOBHm_Chr5g0040541 RchiOBHm_Chr5g0064651 RchiOBHm_Chr5g0064781 RchiOBHm_Chr5g0066161 RchiOBHm_Chr5g0067601 RchiOBHm_Chr5g0067611 RchiOBHm_Chr6g0264621 RchiOBHm_Chr6g0271091 RchiOBHm_Chr6g0274521 RchiOBHm_Chr6g0278261 RchiOBHm_Chr7g0184931 RchiOBHm_Chr7g0231571
rosa_laevigata RLG00000008333 RLG00000022575 RLG00000022597 RLG00000031744 RLG00000035085
rosa_multiflora Rmu_co7992550.1_g000001 Rmu_co8010316.1_g000001 Rmu_co8034468.1_g000001 Rmu_co8035868.1_g000001 Rmu_co8070070.1_g000001 Rmu_co8090484.1_g000001 Rmu_co8168904.1_g000001 Rmu_co8187196.1_g000001 Rmu_co8207388.1_g000001 Rmu_co8212806.1_g000001 Rmu_co8240057.1_g000001 Rmu_co8245773.1_g000001 Rmu_co8271583.1_g000001 Rmu_co8319165.1_g000001 Rmu_co8330561.1_g000001 Rmu_co8359235.1_g000001 Rmu_co8362839.1_g000001 Rmu_co8373057.1_g000002 Rmu_co8378597.1_g000001 Rmu_co8400477.1_g000001 Rmu_co8435579.1_g000001 Rmu_sc0000015.1_g000028 Rmu_sc0000055.1_g000001 Rmu_sc0000083.1_g000002 Rmu_sc0000104.1_g000020 Rmu_sc0000105.1_g000010 Rmu_sc0000110.1_g000008 Rmu_sc0000162.1_g000002 Rmu_sc0000353.1_g000016 Rmu_sc0000365.1_g000093 Rmu_sc0000366.1_g000007 Rmu_sc0000509.1_g000004 Rmu_sc0000509.1_g000005 Rmu_sc0000525.1_g000001 Rmu_sc0000565.1_g000038 Rmu_sc0000579.1_g000015 Rmu_sc0000607.1_g000020 Rmu_sc0000623.1_g000006 Rmu_sc0000633.1_g000013 Rmu_sc0000633.1_g000014 Rmu_sc0000690.1_g000050 Rmu_sc0000721.1_g000014 Rmu_sc0000741.1_g000010 Rmu_sc0000741.1_g000015 Rmu_sc0000811.1_g000020 Rmu_sc0000813.1_g000016 Rmu_sc0000814.1_g000011 Rmu_sc0000834.1_g000015 Rmu_sc0000834.1_g000016 Rmu_sc0000868.1_g000001 Rmu_sc0000924.1_g000049 Rmu_sc0000924.1_g000050 Rmu_sc0000928.1_g000031 Rmu_sc0001035.1_g000026 Rmu_sc0001053.1_g000010 Rmu_sc0001063.1_g000011 Rmu_sc0001065.1_g000002 Rmu_sc0001155.1_g000010 Rmu_sc0001192.1_g000004 Rmu_sc0001206.1_g000014 Rmu_sc0001206.1_g000019 Rmu_sc0001211.1_g000079 Rmu_sc0001238.1_g000040 Rmu_sc0001238.1_g000041 Rmu_sc0001248.1_g000007 Rmu_sc0001250.1_g000004 Rmu_sc0001250.1_g000006 Rmu_sc0001293.1_g000019 Rmu_sc0001309.1_g000013 Rmu_sc0001428.1_g000021 Rmu_sc0001428.1_g000022 Rmu_sc0001433.1_g000010 Rmu_sc0001441.1_g000004 Rmu_sc0001441.1_g000005 Rmu_sc0001461.1_g000091 Rmu_sc0001516.1_g000082 Rmu_sc0001580.1_g000018 Rmu_sc0001626.1_g000028 Rmu_sc0001698.1_g000022 Rmu_sc0001698.1_g000024 Rmu_sc0001782.1_g000030 Rmu_sc0001782.1_g000032 Rmu_sc0001849.1_g000047 Rmu_sc0001851.1_g000010 Rmu_sc0001856.1_g000001 Rmu_sc0001891.1_g000004 Rmu_sc0001904.1_g000035 Rmu_sc0001909.1_g000001 Rmu_sc0001916.1_g000013 Rmu_sc0001997.1_g000005 Rmu_sc0002070.1_g000039 Rmu_sc0002144.1_g000034 Rmu_sc0002212.1_g000013 Rmu_sc0002231.1_g000013 Rmu_sc0002232.1_g000008 Rmu_sc0002244.1_g000022 Rmu_sc0002251.1_g000007 Rmu_sc0002253.1_g000011 Rmu_sc0002323.1_g000006 Rmu_sc0002337.1_g000009 Rmu_sc0002451.1_g000025 Rmu_sc0002451.1_g000041 Rmu_sc0002460.1_g000026 Rmu_sc0002472.1_g000020 Rmu_sc0002669.1_g000074 Rmu_sc0002695.1_g000001 Rmu_sc0002695.1_g000003 Rmu_sc0002764.1_g000030 Rmu_sc0002786.1_g000001 Rmu_sc0002824.1_g000028 Rmu_sc0002847.1_g000008 Rmu_sc0002847.1_g000009 Rmu_sc0002986.1_g000061 Rmu_sc0002986.1_g000067 Rmu_sc0002986.1_g000068 Rmu_sc0002988.1_g000011 Rmu_sc0003110.1_g000022 Rmu_sc0003413.1_g000054 Rmu_sc0003413.1_g000058 Rmu_sc0003454.1_g000014 Rmu_sc0003454.1_g000016 Rmu_sc0003465.1_g000038 Rmu_sc0003465.1_g000040 Rmu_sc0003505.1_g000005 Rmu_sc0003505.1_g000028 Rmu_sc0003670.1_g000001 Rmu_sc0003692.1_g000034 Rmu_sc0003840.1_g000015 Rmu_sc0003862.1_g000015 Rmu_sc0003892.1_g000010 Rmu_sc0003981.1_g000014 Rmu_sc0004003.1_g000008 Rmu_sc0004031.1_g000005 Rmu_sc0004074.1_g000001 Rmu_sc0004135.1_g000010 Rmu_sc0004344.1_g000010 Rmu_sc0004344.1_g000011 Rmu_sc0004344.1_g000012 Rmu_sc0004392.1_g000010 Rmu_sc0004424.1_g000011 Rmu_sc0004502.1_g000024 Rmu_sc0004569.1_g000005 Rmu_sc0004602.1_g000056 Rmu_sc0004622.1_g000015 Rmu_sc0004798.1_g000018 Rmu_sc0004811.1_g000014 Rmu_sc0004842.1_g000001 Rmu_sc0004990.1_g000021 Rmu_sc0005023.1_g000029 Rmu_sc0005072.1_g000015 Rmu_sc0005449.1_g000001 Rmu_sc0005654.1_g000010 Rmu_sc0005676.1_g000008 Rmu_sc0005685.1_g000026 Rmu_sc0005913.1_g000020 Rmu_sc0005947.1_g000004 Rmu_sc0006420.1_g000020 Rmu_sc0006450.1_g000003 Rmu_sc0006532.1_g000001 Rmu_sc0006558.1_g000001 Rmu_sc0006583.1_g000017 Rmu_sc0006669.1_g000002 Rmu_sc0006739.1_g000003 Rmu_sc0006746.1_g000012 Rmu_sc0006803.1_g000019 Rmu_sc0006888.1_g000056 Rmu_sc0007341.1_g000014 Rmu_sc0007341.1_g000015 Rmu_sc0007435.1_g000001 Rmu_sc0007486.1_g000005 Rmu_sc0007686.1_g000006 Rmu_sc0007876.1_g000006 Rmu_sc0007888.1_g000006 Rmu_sc0008079.1_g000008 Rmu_sc0008440.1_g000006 Rmu_sc0008633.1_g000007 Rmu_sc0009546.1_g000002 Rmu_sc0010357.1_g000007 Rmu_sc0010385.1_g000003 Rmu_sc0010543.1_g000011 Rmu_sc0011563.1_g000001 Rmu_sc0012228.1_g000002 Rmu_sc0012491.1_g000001 Rmu_sc0012650.1_g000001 Rmu_sc0013205.1_g000006 Rmu_sc0013216.1_g000003 Rmu_sc0014191.1_g000001 Rmu_sc0014895.1_g000001 Rmu_sc0014957.1_g000001 Rmu_sc0015243.1_g000001 Rmu_sc0015746.1_g000001 Rmu_sc0017392.1_g000001 Rmu_sc0018470.1_g000001 Rmu_sc0018623.1_g000006 Rmu_sc0021556.1_g000004 Rmu_sc0022401.1_g000001 Rmu_sc0024611.1_g000001 Rmu_sc0024953.1_g000001 Rmu_sc0025466.1_g000001 Rmu_sc0025892.1_g000001 Rmu_sc0025909.1_g000001 Rmu_sc0026281.1_g000001 Rmu_sc0027327.1_g000001 Rmu_sc0028428.1_g000001 Rmu_sc0029754.1_g000001 Rmu_sc0032120.1_g000001 Rmu_sc0039702.1_g000001 Rmu_ssc0000089.1_g000022 Rmu_ssc0000150.1_g000006 Rmu_ssc0000150.1_g000007 Rmu_ssc0000231.1_g000010 Rmu_ssc0000233.1_g000059 Rmu_ssc0000233.1_g000061
rosa_roxburghii Rroxscaffold_1G00002110 Rroxscaffold_1G00003320 Rroxscaffold_1G00012840 Rroxscaffold_1G00013850 Rroxscaffold_1G00023980 Rroxscaffold_1G00029750 Rroxscaffold_1G00033890 Rroxscaffold_1G00042470 Rroxscaffold_1G00053360 Rroxscaffold_1G00054060 Rroxscaffold_2G00076150 Rroxscaffold_2G00089750 Rroxscaffold_2G00152600 Rroxscaffold_4G00299540 Rroxscaffold_4G00320960 Rroxscaffold_5G00338640 Rroxscaffold_5G00376300 Rroxscaffold_5G00377680 Rroxscaffold_6G00394120 Rroxscaffold_7G00213820 Rroxscaffold_7G00215950 Rroxscaffold_7G00217790
rosa_rugosa Rorug01G0075300 Rorug01G0094600 Rorug01G0094600 Rorug01G0101800.1 Rorug01G0309500 Rorug02G0256300 Rorug02G0465700 Rorug04G0045200 Rorug04G0091000 Rorug04G0091100 Rorug04G0091300 Rorug04G0178200 Rorug04G0450400 Rorug05G0144200 Rorug07G0202400 Rorug07G0326300
rosa_samantha Rh1AG266500 Rh1AG296100 Rh1AG408600 Rh1BG257900 Rh1BG392900 Rh1BG393000 Rh1CG125400 Rh1CG149300 Rh1CG405500 Rh1DG423700 Rh1DG423800 Rh2AG369400 Rh2BG234000 Rh2BG334600 Rh2CG157900 Rh2CG232800 Rh3AG146000 Rh3AG161400 Rh3AG217200 Rh3AG329700 Rh3CG223900 Rh3CG320600 Rh3DG258400 Rh4AG105000 Rh4AG340300 Rh4BG026600 Rh4BG138500 Rh4CG113500 Rh4CG322400 Rh4DG203100 Rh5AG169100 Rh5AG372400 Rh5AG440400 Rh5BG194300 Rh5CG228700 Rh5CG263400 Rh5CG272000 Rh5CG579400 Rh5DG175100 Rh5DG472600 Rh5DG493400 Rh6AG418900 Rh6CG192400 Rh6CG450200 Rh6DG127600 Rh6DG193500 Rh6DG294100 Rh6DG320400 Rh6DG349400 Rh7AG364800 Rh7AG443300 Rh7DG198300 Rh7DG346300
rosa_wichuraiana Rw0G003660 Rw0G004330 Rw0G020060 Rw0G020860 Rw0G021260 Rw1G001000 Rw1G001470 Rw1G001810 Rw1G005640 Rw1G006320 Rw1G010590 Rw1G013140 Rw1G016260 Rw1G016270 Rw1G016320 Rw1G017680 Rw1G019120 Rw1G021470 Rw1G027240 Rw1G028020 Rw1G030070 Rw2G003580 Rw2G007770 Rw2G012130 Rw2G012300 Rw2G013070 Rw2G014700 Rw2G017960 Rw2G028780 Rw2G034790 Rw2G035470 Rw2G036310 Rw2G039430 Rw2G040550 Rw2G042560 Rw3G005710 Rw3G010390 Rw3G012630 Rw3G015510 Rw3G016130 Rw3G020240 Rw3G020760 Rw3G021500 Rw3G023220 Rw3G026440 Rw3G026960 Rw3G029080 Rw3G029250 Rw4G001900 Rw4G004890 Rw4G005770 Rw4G006470 Rw4G008100 Rw4G009360 Rw4G009770 Rw4G014530 Rw4G015370 Rw4G023120 Rw5G002130 Rw5G006640 Rw5G014680 Rw5G015180 Rw5G016210 Rw5G019940 Rw5G026100 Rw5G029870 Rw5G034430 Rw5G035890 Rw5G041340 Rw5G048760 Rw5G048770 Rw6G004170 Rw6G007540 Rw6G007600 Rw6G009420 Rw6G010000 Rw6G020720 Rw6G022860 Rw7G007400 Rw7G007860 Rw7G027180 Rw7G032110 Rw7G033090 Rw7G034980 Rw7G036100 Rw7G036480 Rw7G036550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1852
Acc16I TGCGCA 1 cut(s) 2199
Acc65I GGTACC 2 cut(s) 922, 1130
AccB1I GGYRCC 2 cut(s) 922, 1130
AccB7I CCANNNNNTGG 1 cut(s) 1347
AccBSI CCGCTC 2 cut(s) 195, 688
AccII CGCG 1 cut(s) 2918
AciI CCGC 9 cut(s) 107, 195, 688, 1291, 1424, 2677, 2783, 2963, 3071
AclI AACGTT 1 cut(s) 1173
AclWI GGATC 6 cut(s) 146, 505, 548, 979, 2050, 3116
AcoI YGGCCR 3 cut(s) 118, 711, 908
AcsI RAATTY 9 cut(s) 1052, 1362, 1454, 2003, 2026, 2322, 2547, 2650, 3087
AcuI CTGAAG 3 cut(s) 1740, 2190, 2205
AcyI GRCGYC 1 cut(s) 1849
AdeI CACNNNGTG 1 cut(s) 1333
AflIII ACRYGT 4 cut(s) 68, 177, 696, 2916
AgeI ACCGGT 1 cut(s) 2084
AjnI CCWGG 2 cut(s) 1003, 2988
AjuI GAANNNNNNNTTGG 2 cut(s) 2112, 2144
AluBI AGCT 8 cut(s) 251, 619, 719, 1048, 1399, 1688, 2183, 2359
AluI AGCT 8 cut(s) 251, 619, 719, 1048, 1399, 1688, 2183, 2359
Alw21I GWGCWC 2 cut(s) 2751, 2943
Alw26I GTCTC 8 cut(s) 125, 368, 1019, 1024, 1686, 1856, 2127, 2622
Alw44I GTGCAC 2 cut(s) 2747, 2939
AlwI GGATC 6 cut(s) 146, 505, 548, 979, 2050, 3116
AlwNI CAGNNNCTG 1 cut(s) 37
Ama87I CYCGRG 4 cut(s) 848, 988, 2066, 2453
AoxI GGCC 6 cut(s) 118, 577, 711, 908, 992, 2979
ApaI GGGCCC 1 cut(s) 996
ApaLI GTGCAC 2 cut(s) 2747, 2939
ApeKI GCWGC 6 cut(s) 31, 235, 430, 1224, 1396, 2490
ApoI RAATTY 9 cut(s) 1052, 1362, 1454, 2003, 2026, 2322, 2547, 2650, 3087
AseI ATTAAT 1 cut(s) 3183
AsiGI ACCGGT 1 cut(s) 2084
Asp718I GGTACC 2 cut(s) 922, 1130
AspLEI GCGC 2 cut(s) 206, 2200
AspS9I GGNCC 8 cut(s) 104, 469, 832, 992, 993, 1317, 1604, 2087
AsuC2I CCSGG 9 cut(s) 230, 318, 989, 990, 996, 1780, 1796, 1967, 2960
AvaI CYCGRG 4 cut(s) 848, 988, 2066, 2453
AvaII GGWCC 6 cut(s) 104, 469, 832, 1317, 1604, 2087
AxyI CCTNAGG 2 cut(s) 38, 1608
BaeGI GKGCMC 4 cut(s) 996, 1571, 2751, 2943
BaeI ACNNNNGTAYC 2 cut(s) 644, 677
BalI TGGCCA 1 cut(s) 120
BanI GGYRCC 2 cut(s) 922, 1130
BanII GRGCYC 3 cut(s) 855, 996, 3018
BarI GAAGNNNNNNTAC 4 cut(s) 639, 671, 947, 979
BauI CACGAG 2 cut(s) 1097, 2201
Bbv12I GWGCWC 2 cut(s) 2751, 2943
BbvI GCAGC 6 cut(s) 43, 247, 417, 1236, 1408, 2477
BceAI ACGGC 2 cut(s) 726, 1885
BciT130I CCWGG 2 cut(s) 1005, 2990
BciVI GTATCC 4 cut(s) 488, 1178, 1761, 2121
BclI TGATCA 2 cut(s) 112, 1509
BcnI CCSGG 9 cut(s) 230, 318, 989, 990, 996, 1780, 1796, 1967, 2960
BcoDI GTCTC 8 cut(s) 125, 368, 1019, 1024, 1686, 1856, 2127, 2622
BfaI CTAG 4 cut(s) 1523, 2360, 2552, 2778
BfmI CTRYAG 3 cut(s) 246, 410, 627
BfuI GTATCC 4 cut(s) 488, 1178, 1761, 2121
BglII AGATCT 1 cut(s) 487
BisI GCNGC 8 cut(s) 32, 236, 431, 1225, 1397, 1425, 2491, 2964
BlpI GCTNAGC 1 cut(s) 1400
BlsI GCNGC 8 cut(s) 33, 237, 432, 1226, 1398, 1426, 2492, 2965
Bme18I GGWCC 6 cut(s) 104, 469, 832, 1317, 1604, 2087
BmeT110I CYCGRG 4 cut(s) 848, 988, 2066, 2453
BmgT120I GGNCC 8 cut(s) 104, 469, 832, 992, 993, 1317, 1604, 2087
BmiI GGNNCC 8 cut(s) 105, 924, 993, 994, 1132, 1318, 1338, 1899
BmsI GCATC 4 cut(s) 13, 417, 1101, 1521
BoxI GACNNNNGTC 2 cut(s) 588, 1068
BpmI CTGGAG 2 cut(s) 1516, 2284
Bpu10I CCTNAGC 2 cut(s) 1208, 2907
Bpu1102I GCTNAGC 1 cut(s) 1400
BpuEI CTTGAG 3 cut(s) 192, 1668, 2557
BpuMI CCSGG 9 cut(s) 230, 318, 989, 990, 996, 1780, 1796, 1967, 2960
Bsa29I ATCGAT 1 cut(s) 7
BsaBI GATNNNNATC 3 cut(s) 405, 3120, 3126
BsaHI GRCGYC 1 cut(s) 1849
BsaI GGTCTC 1 cut(s) 1024
BsaWI WCCGGW 2 cut(s) 592, 2084
BsaXI ACNNNNNCTCC 4 cut(s) 677, 707, 1213, 1243
Bse118I RCCGGY 3 cut(s) 910, 2084, 2263
Bse1I ACTGG 5 cut(s) 1499, 2090, 2301, 2378, 2414
Bse21I CCTNAGG 2 cut(s) 38, 1608
Bse3DI GCAATG 2 cut(s) 1231, 2364
Bse8I GATNNNNATC 3 cut(s) 405, 3120, 3126
BseBI CCWGG 2 cut(s) 1005, 2990
BseCI ATCGAT 1 cut(s) 7
BseJI GATNNNNATC 3 cut(s) 405, 3120, 3126
BseMI GCAATG 2 cut(s) 1231, 2364
BseMII CTCAG 4 cut(s) 29, 120, 1414, 1599
BseNI ACTGG 5 cut(s) 1499, 2090, 2301, 2378, 2414
BseRI GAGGAG 2 cut(s) 55, 3031
BseSI GKGCMC 4 cut(s) 996, 1571, 2751, 2943
BseX3I CGGCCG 1 cut(s) 711
BseXI GCAGC 6 cut(s) 43, 247, 417, 1236, 1408, 2477
BsgI GTGCAG 1 cut(s) 254
Bsh1236I CGCG 1 cut(s) 2918
Bsh1285I CGRYCG 3 cut(s) 387, 714, 1874
BshFI GGCC 6 cut(s) 120, 579, 713, 910, 994, 2981
BshNI GGYRCC 2 cut(s) 922, 1130
BshTI ACCGGT 1 cut(s) 2084
BshVI ATCGAT 1 cut(s) 7
BsiEI CGRYCG 3 cut(s) 387, 714, 1874
BsiHKAI GWGCWC 2 cut(s) 2751, 2943
BsiHKCI CYCGRG 4 cut(s) 848, 988, 2066, 2453
BslFI GGGAC 3 cut(s) 1076, 1330, 1811
BsmAI GTCTC 8 cut(s) 125, 368, 1019, 1024, 1686, 1856, 2127, 2622
BsmBI CGTCTC 1 cut(s) 1856
BsmFI GGGAC 3 cut(s) 1076, 1330, 1811
BsmI GAATGC 1 cut(s) 164
BsnI GGCC 6 cut(s) 120, 579, 713, 910, 994, 2981
Bso31I GGTCTC 1 cut(s) 1024
BsoBI CYCGRG 4 cut(s) 848, 988, 2066, 2453
Bsp120I GGGCCC 1 cut(s) 992
Bsp1286I GDGCHC 6 cut(s) 855, 996, 1571, 2751, 2943, 3018
Bsp1407I TGTACA 1 cut(s) 693
Bsp1720I GCTNAGC 1 cut(s) 1400
Bsp19I CCATGG 2 cut(s) 941, 2115
BspACI CCGC 9 cut(s) 107, 195, 688, 1291, 1424, 2677, 2783, 2963, 3071
BspANI GGCC 6 cut(s) 120, 579, 713, 910, 994, 2981
BspCNI CTCAG 4 cut(s) 30, 121, 1413, 1600
BspDI ATCGAT 1 cut(s) 7
BspFNI CGCG 1 cut(s) 2918
BspHI TCATGA 2 cut(s) 1282, 1825
BspLI GGNNCC 8 cut(s) 105, 924, 993, 994, 1132, 1318, 1338, 1899
BspMAI CTGCAG 1 cut(s) 631
BspPI GGATC 6 cut(s) 146, 505, 548, 979, 2050, 3116
BspQI GCTCTTC 2 cut(s) 1038, 3093
BspT107I GGYRCC 2 cut(s) 922, 1130
BspTNI GGTCTC 1 cut(s) 1024
BsrBI CCGCTC 2 cut(s) 195, 688
BsrDI GCAATG 2 cut(s) 1231, 2364
BsrFI RCCGGY 3 cut(s) 910, 2084, 2263
BsrGI TGTACA 1 cut(s) 693
BsrI ACTGG 5 cut(s) 1499, 2090, 2301, 2378, 2414
BssAI RCCGGY 3 cut(s) 910, 2084, 2263
BssNI GRCGYC 1 cut(s) 1849
BssSI CACGAG 2 cut(s) 1097, 2201
BssT1I CCWWGG 4 cut(s) 571, 941, 2115, 3104
Bst2BI CACGAG 2 cut(s) 1097, 2201
Bst2UI CCWGG 2 cut(s) 1005, 2990
Bst6I CTCTTC 5 cut(s) 1038, 1814, 1859, 2759, 3093
BstACI GRCGYC 1 cut(s) 1849
BstAPI GCANNNNNTGC 3 cut(s) 1233, 2077, 2195
BstAUI TGTACA 1 cut(s) 693
BstC8I GCNNGC 7 cut(s) 291, 520, 631, 732, 1615, 2606, 2783
BstDEI CTNAG 8 cut(s) 38, 129, 1208, 1400, 1608, 2543, 2907, 3231
BstDSI CCRYGG 4 cut(s) 436, 941, 1153, 2115
BstEII GGTNACC 2 cut(s) 1256, 2519
BstENI CCTNNNNNAGG 1 cut(s) 2906
BstFNI CGCG 1 cut(s) 2918
BstHHI GCGC 2 cut(s) 206, 2200
BstMAI GTCTC 8 cut(s) 125, 368, 1019, 1024, 1686, 1856, 2127, 2622
BstMCI CGRYCG 3 cut(s) 387, 714, 1874
BstMWI GCNNNNNNNGC 6 cut(s) 201, 1233, 2077, 2195, 2674, 2787
BstNI CCWGG 2 cut(s) 1005, 2990
BstNSI RCATGY 6 cut(s) 72, 181, 522, 591, 700, 1118
BstPAI GACNNNNGTC 2 cut(s) 588, 1068
BstPI GGTNACC 2 cut(s) 1256, 2519
BstSFI CTRYAG 3 cut(s) 246, 410, 627
BstSLI GKGCMC 4 cut(s) 996, 1571, 2751, 2943
BstUI CGCG 1 cut(s) 2918
BstV1I GCAGC 6 cut(s) 43, 247, 417, 1236, 1408, 2477
BstX2I RGATCY 3 cut(s) 487, 510, 553
BstXI CCANNNNNNTGG 1 cut(s) 1420
BstYI RGATCY 3 cut(s) 487, 510, 553
BstZI CGGCCG 1 cut(s) 711
Bsu15I ATCGAT 1 cut(s) 7
Bsu36I CCTNAGG 2 cut(s) 38, 1608
BsuI GTATCC 4 cut(s) 488, 1178, 1761, 2121
BsuRI GGCC 6 cut(s) 120, 579, 713, 910, 994, 2981
BsuTUI ATCGAT 1 cut(s) 7
BtgI CCRYGG 4 cut(s) 436, 941, 1153, 2115
BtgZI GCGATG 3 cut(s) 1227, 2570, 3168
BtsI GCAGTG 4 cut(s) 258, 417, 1377, 2826
Cac8I GCNNGC 7 cut(s) 291, 520, 631, 732, 1615, 2606, 2783
CaiI CAGNNNCTG 1 cut(s) 37
CciI TCATGA 2 cut(s) 1282, 1825
CfoI GCGC 2 cut(s) 206, 2200
Cfr10I RCCGGY 3 cut(s) 910, 2084, 2263
Cfr13I GGNCC 8 cut(s) 104, 469, 832, 992, 993, 1317, 1604, 2087
Cfr9I CCCGGG 1 cut(s) 988
ClaI ATCGAT 1 cut(s) 7
CseI GACGC 5 cut(s) 593, 802, 813, 2197, 2924
CspAI ACCGGT 1 cut(s) 2084
DdeI CTNAG 8 cut(s) 38, 129, 1208, 1400, 1608, 2543, 2907, 3231
DraI TTTAAA 1 cut(s) 3067
DraIII CACNNNGTG 1 cut(s) 1333
EaeI YGGCCR 3 cut(s) 118, 711, 908
EagI CGGCCG 1 cut(s) 711
Eam1104I CTCTTC 5 cut(s) 1038, 1814, 1859, 2759, 3093
EarI CTCTTC 5 cut(s) 1038, 1814, 1859, 2759, 3093
EciI GGCGGA 1 cut(s) 2692
EclXI CGGCCG 1 cut(s) 711
Eco130I CCWWGG 4 cut(s) 571, 941, 2115, 3104
Eco24I GRGCYC 3 cut(s) 855, 996, 3018
Eco31I GGTCTC 1 cut(s) 1024
Eco47I GGWCC 6 cut(s) 104, 469, 832, 1317, 1604, 2087
Eco52I CGGCCG 1 cut(s) 711
Eco57I CTGAAG 3 cut(s) 1740, 2190, 2205
Eco81I CCTNAGG 2 cut(s) 38, 1608
Eco88I CYCGRG 4 cut(s) 848, 988, 2066, 2453
Eco91I GGTNACC 2 cut(s) 1256, 2519
EcoNI CCTNNNNNAGG 1 cut(s) 2906
EcoO109I RGGNCCY 1 cut(s) 992
EcoO65I GGTNACC 2 cut(s) 1256, 2519
EcoRI GAATTC 3 cut(s) 2547, 2650, 3087
EcoRII CCWGG 2 cut(s) 1003, 2988
EcoT14I CCWWGG 4 cut(s) 571, 941, 2115, 3104
EcoT22I ATGCAT 3 cut(s) 6, 520, 1116
EcoT38I GRGCYC 3 cut(s) 855, 996, 3018
ErhI CCWWGG 4 cut(s) 571, 941, 2115, 3104
Esp3I CGTCTC 1 cut(s) 1856
FalI AAGNNNNNCTT 2 cut(s) 747, 779
FaqI GGGAC 3 cut(s) 1076, 1330, 1811
FauI CCCGC 2 cut(s) 2790, 3064
FbaI TGATCA 2 cut(s) 112, 1509
Fnu4HI GCNGC 8 cut(s) 32, 236, 431, 1225, 1397, 1425, 2491, 2964
FriOI GRGCYC 3 cut(s) 855, 996, 3018
Fsp4HI GCNGC 8 cut(s) 32, 236, 431, 1225, 1397, 1425, 2491, 2964
FspBI CTAG 4 cut(s) 1523, 2360, 2552, 2778
FspI TGCGCA 1 cut(s) 2199
GlaI GCGC 2 cut(s) 205, 2199
GluI GCNGC 8 cut(s) 32, 236, 431, 1225, 1397, 1425, 2491, 2964
GsuI CTGGAG 2 cut(s) 1516, 2284
HaeIII GGCC 6 cut(s) 120, 579, 713, 910, 994, 2981
HgaI GACGC 5 cut(s) 593, 802, 813, 2197, 2924
HhaI GCGC 2 cut(s) 206, 2200
Hin1I GRCGYC 1 cut(s) 1849
Hin6I GCGC 2 cut(s) 204, 2198
HinP1I GCGC 2 cut(s) 204, 2198
HincII GTYRAC 2 cut(s) 256, 2932
HindII GTYRAC 2 cut(s) 256, 2932
HinfI GANTC 9 cut(s) 622, 889, 1822, 1920, 2333, 2708, 3146, 3203, 3215
HpaI GTTAAC 1 cut(s) 256
Hpy99I CGWCG 2 cut(s) 866, 1851
HpyCH4IV ACGT 4 cut(s) 354, 1065, 1173, 1849
HpyF10VI GCNNNNNNNGC 6 cut(s) 201, 1233, 2077, 2195, 2674, 2787
HpyF3I CTNAG 8 cut(s) 38, 129, 1208, 1400, 1608, 2543, 2907, 3231
HpySE526I ACGT 4 cut(s) 354, 1065, 1173, 1849
Hsp92I GRCGYC 1 cut(s) 1849
HspAI GCGC 2 cut(s) 204, 2198
KpnI GGTACC 2 cut(s) 926, 1134
Ksp22I TGATCA 2 cut(s) 112, 1509
KspAI GTTAAC 1 cut(s) 256
LguI GCTCTTC 2 cut(s) 1038, 3093
LmnI GCTCC 6 cut(s) 685, 1221, 1342, 1693, 1897, 2234
Lsp1109I GCAGC 6 cut(s) 43, 247, 417, 1236, 1408, 2477
LweI GCATC 4 cut(s) 13, 417, 1101, 1521
MaeI CTAG 4 cut(s) 1523, 2360, 2552, 2778
MaeII ACGT 4 cut(s) 354, 1065, 1173, 1849
MaeIII GTNAC 6 cut(s) 44, 599, 1256, 2209, 2519, 2912
MbiI CCGCTC 2 cut(s) 195, 688
MfeI CAATTG 1 cut(s) 2072
MflI RGATCY 3 cut(s) 487, 510, 553
MhlI GDGCHC 6 cut(s) 855, 996, 1571, 2751, 2943, 3018
MlsI TGGCCA 1 cut(s) 120
MluI ACGCGT 1 cut(s) 2916
MluNI TGGCCA 1 cut(s) 120
MlyI GAGTC 6 cut(s) 616, 898, 1831, 2327, 3140, 3197
MmeI TCCRAC 5 cut(s) 171, 179, 322, 663, 885
Mox20I TGGCCA 1 cut(s) 120
Mph1103I ATGCAT 3 cut(s) 6, 520, 1116
MscI TGGCCA 1 cut(s) 120
MseI TTAA 9 cut(s) 255, 366, 1050, 1377, 1640, 2388, 3057, 3066, 3183
MslI CAYNNNNRTG 6 cut(s) 114, 946, 2105, 2120, 2216, 2744
Msp20I TGGCCA 1 cut(s) 120
MspA1I CMGCKG 1 cut(s) 251
MunI CAATTG 1 cut(s) 2072
Mva1269I GAATGC 1 cut(s) 164
MvaI CCWGG 2 cut(s) 1005, 2990
MvnI CGCG 1 cut(s) 2918
MwoI GCNNNNNNNGC 6 cut(s) 201, 1233, 2077, 2195, 2674, 2787
NciI CCSGG 9 cut(s) 230, 318, 989, 990, 996, 1780, 1796, 1967, 2960
NcoI CCATGG 2 cut(s) 941, 2115
NlaIV GGNNCC 8 cut(s) 105, 924, 993, 994, 1132, 1318, 1338, 1899
NmuCI GTSAC 5 cut(s) 599, 1256, 2209, 2519, 2912
NsbI TGCGCA 1 cut(s) 2199
NsiI ATGCAT 3 cut(s) 6, 520, 1116
NspI RCATGY 6 cut(s) 72, 181, 522, 591, 700, 1118
PaeI GCATGC 1 cut(s) 522
PaeR7I CTCGAG 1 cut(s) 2453
PagI TCATGA 2 cut(s) 1282, 1825
PciI ACATGT 3 cut(s) 68, 177, 696
PciSI GCTCTTC 2 cut(s) 1038, 3093
PcsI WCGNNNNNNNCGW 2 cut(s) 469, 3082
PctI GAATGC 1 cut(s) 164
PfeI GAWTC 3 cut(s) 1920, 2708, 3215
PflMI CCANNNNNTGG 1 cut(s) 1347
PfoI TCCNGGA 2 cut(s) 1794, 1965
PinAI ACCGGT 1 cut(s) 2084
PkrI GCNGC 8 cut(s) 33, 237, 432, 1226, 1398, 1426, 2492, 2965
PleI GAGTC 6 cut(s) 616, 897, 1830, 2327, 3140, 3197
PpsI GAGTC 6 cut(s) 616, 897, 1830, 2327, 3140, 3197
PscI ACATGT 3 cut(s) 68, 177, 696
PshAI GACNNNNGTC 2 cut(s) 588, 1068
PshBI ATTAAT 1 cut(s) 3183
Psp1406I AACGTT 1 cut(s) 1173
Psp6I CCWGG 2 cut(s) 1003, 2988
PspEI GGTNACC 2 cut(s) 1256, 2519
PspGI CCWGG 2 cut(s) 1003, 2988
PspN4I GGNNCC 8 cut(s) 105, 924, 993, 994, 1132, 1318, 1338, 1899
PspOMI GGGCCC 1 cut(s) 992
PspPI GGNCC 8 cut(s) 104, 469, 832, 992, 993, 1317, 1604, 2087
PstI CTGCAG 1 cut(s) 631
PstNI CAGNNNCTG 1 cut(s) 37
PsuI RGATCY 3 cut(s) 487, 510, 553
PvuII CAGCTG 1 cut(s) 251
RseI CAYNNNNRTG 6 cut(s) 114, 946, 2105, 2120, 2216, 2744
SapI GCTCTTC 2 cut(s) 1038, 3093
SaqAI TTAA 9 cut(s) 255, 366, 1050, 1377, 1640, 2388, 3057, 3066, 3183
SatI GCNGC 8 cut(s) 32, 236, 431, 1225, 1397, 1425, 2491, 2964
Sau96I GGNCC 8 cut(s) 104, 469, 832, 992, 993, 1317, 1604, 2087
SbfI CCTGCAGG 1 cut(s) 631
SchI GAGTC 6 cut(s) 616, 898, 1831, 2327, 3140, 3197
SdaI CCTGCAGG 1 cut(s) 631
SduI GDGCHC 6 cut(s) 855, 996, 1571, 2751, 2943, 3018
SfaNI GCATC 4 cut(s) 13, 417, 1101, 1521
SfcI CTRYAG 3 cut(s) 246, 410, 627
Sfr274I CTCGAG 1 cut(s) 2453
SinI GGWCC 6 cut(s) 104, 469, 832, 1317, 1604, 2087
SlaI CTCGAG 1 cut(s) 2453
SmaI CCCGGG 1 cut(s) 990
SmiMI CAYNNNNRTG 6 cut(s) 114, 946, 2105, 2120, 2216, 2744
SmlI CTYRAG 4 cut(s) 207, 1683, 2453, 2572
SmoI CTYRAG 4 cut(s) 207, 1683, 2453, 2572
SphI GCATGC 1 cut(s) 522
Sse8387I CCTGCAGG 1 cut(s) 631
SsiI CCGC 9 cut(s) 107, 195, 688, 1291, 1424, 2677, 2783, 2963, 3071
SspI AATATT 1 cut(s) 2814
SspMI CTAG 4 cut(s) 1523, 2360, 2552, 2778
StyI CCWWGG 4 cut(s) 571, 941, 2115, 3104
TaiI ACGT 4 cut(s) 357, 1068, 1176, 1852
TaqI TCGA 8 cut(s) 7, 383, 425, 1017, 1296, 1870, 2454, 2947
TaqII GACCGA 1 cut(s) 2813
TatI WGTACW 7 cut(s) 63, 140, 276, 414, 693, 1089, 2092
TauI GCSGC 2 cut(s) 1427, 2966
TfiI GAWTC 3 cut(s) 1920, 2708, 3215
Tru1I TTAA 9 cut(s) 255, 366, 1050, 1377, 1640, 2388, 3057, 3066, 3183
Tru9I TTAA 9 cut(s) 255, 366, 1050, 1377, 1640, 2388, 3057, 3066, 3183
TseFI GTSAC 5 cut(s) 599, 1256, 2209, 2519, 2912
TseI GCWGC 6 cut(s) 31, 235, 430, 1224, 1396, 2490
Tsp45I GTSAC 5 cut(s) 599, 1256, 2209, 2519, 2912
TspGWI ACGGA 1 cut(s) 2823
TspMI CCCGGG 1 cut(s) 988
Van91I CCANNNNNTGG 1 cut(s) 1347
VneI GTGCAC 2 cut(s) 2747, 2939
VpaK11BI GGWCC 6 cut(s) 104, 469, 832, 1317, 1604, 2087
VspI ATTAAT 1 cut(s) 3183
XagI CCTNNNNNAGG 1 cut(s) 2906
XapI RAATTY 9 cut(s) 1052, 1362, 1454, 2003, 2026, 2322, 2547, 2650, 3087
XceI RCATGY 6 cut(s) 72, 181, 522, 591, 700, 1118
XhoI CTCGAG 1 cut(s) 2453
XmaI CCCGGG 1 cut(s) 988
XspI CTAG 4 cut(s) 1523, 2360, 2552, 2778
ZraI GACGTC 1 cut(s) 1850
Zsp2I ATGCAT 3 cut(s) 6, 520, 1116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.