TdcA1-ORF2 protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transposase_21 | PF02992 | 125 - 202 | 1e-16 | Transposase family tnp2 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 395 |
| AccB1I | GGYRCC | 1 cut(s) | 395 |
| AccI | GTMKAC | 1 cut(s) | 93 |
| AciI | CCGC | 1 cut(s) | 556 |
| AclI | AACGTT | 1 cut(s) | 438 |
| AclWI | GGATC | 2 cut(s) | 286, 329 |
| AfaI | GTAC | 3 cut(s) | 59, 397, 529 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 419 |
| AgsI | TTSAA | 2 cut(s) | 53, 122 |
| AluBI | AGCT | 1 cut(s) | 32 |
| AluI | AGCT | 1 cut(s) | 32 |
| Alw26I | GTCTC | 1 cut(s) | 149 |
| AlwI | GGATC | 2 cut(s) | 286, 329 |
| AoxI | GGCC | 1 cut(s) | 358 |
| ApeKI | GCWGC | 3 cut(s) | 16, 211, 489 |
| Asp718I | GGTACC | 1 cut(s) | 395 |
| AspS9I | GGNCC | 2 cut(s) | 250, 582 |
| AsuC2I | CCSGG | 1 cut(s) | 99 |
| AsuHPI | GGTGA | 1 cut(s) | 515 |
| AvaII | GGWCC | 2 cut(s) | 250, 582 |
| BanI | GGYRCC | 1 cut(s) | 395 |
| BbsI | GAAGAC | 2 cut(s) | 116, 221 |
| BbvI | GCAGC | 3 cut(s) | 28, 198, 501 |
| BccI | CCATC | 3 cut(s) | 124, 407, 572 |
| BciVI | GTATCC | 2 cut(s) | 269, 443 |
| BclI | TGATCA | 1 cut(s) | 544 |
| BcnI | CCSGG | 1 cut(s) | 99 |
| BcoDI | GTCTC | 1 cut(s) | 149 |
| BfaI | CTAG | 1 cut(s) | 27 |
| BfuI | GTATCC | 2 cut(s) | 269, 443 |
| BglII | AGATCT | 1 cut(s) | 268 |
| BisI | GCNGC | 4 cut(s) | 17, 212, 490, 557 |
| BlsI | GCNGC | 4 cut(s) | 18, 213, 491, 558 |
| Bme1390I | CCNGG | 1 cut(s) | 99 |
| Bme18I | GGWCC | 2 cut(s) | 250, 582 |
| BmgT120I | GGNCC | 2 cut(s) | 250, 582 |
| BmiI | GGNNCC | 2 cut(s) | 397, 583 |
| BmrFI | CCNGG | 1 cut(s) | 99 |
| BmsI | GCATC | 4 cut(s) | 3, 198, 366, 553 |
| BoxI | GACNNNNGTC | 1 cut(s) | 369 |
| BpiI | GAAGAC | 2 cut(s) | 116, 221 |
| Bpu10I | CCTNAGC | 1 cut(s) | 6 |
| BpuMI | CCSGG | 1 cut(s) | 99 |
| BsaBI | GATNNNNATC | 1 cut(s) | 186 |
| BsaJI | CCNNGG | 4 cut(s) | 97, 217, 352, 418 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 478, 508 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 419 |
| Bse3DI | GCAATG | 1 cut(s) | 496 |
| Bse8I | GATNNNNATC | 1 cut(s) | 186 |
| BseDI | CCNNGG | 4 cut(s) | 97, 217, 352, 418 |
| BseGI | GGATG | 1 cut(s) | 429 |
| BseJI | GATNNNNATC | 1 cut(s) | 186 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 419 |
| BseMI | GCAATG | 1 cut(s) | 496 |
| BseXI | GCAGC | 3 cut(s) | 28, 198, 501 |
| Bsh1285I | CGRYCG | 1 cut(s) | 168 |
| BshFI | GGCC | 1 cut(s) | 360 |
| BshNI | GGYRCC | 1 cut(s) | 395 |
| BsiEI | CGRYCG | 1 cut(s) | 168 |
| BsiSI | CCGG | 1 cut(s) | 99 |
| BslFI | GGGAC | 1 cut(s) | 595 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 419 |
| BsmAI | GTCTC | 1 cut(s) | 149 |
| BsmFI | GGGAC | 1 cut(s) | 595 |
| BsnI | GGCC | 1 cut(s) | 360 |
| Bsp143I | GATC | 4 cut(s) | 268, 291, 334, 544 |
| BspACI | CCGC | 1 cut(s) | 556 |
| BspANI | GGCC | 1 cut(s) | 360 |
| BspLI | GGNNCC | 2 cut(s) | 397, 583 |
| BspPI | GGATC | 2 cut(s) | 286, 329 |
| BspT107I | GGYRCC | 1 cut(s) | 395 |
| BsrDI | GCAATG | 1 cut(s) | 496 |
| BssECI | CCNNGG | 4 cut(s) | 97, 217, 352, 418 |
| BssMI | GATC | 4 cut(s) | 268, 291, 334, 544 |
| BssNAI | GTATAC | 1 cut(s) | 94 |
| BssT1I | CCWWGG | 1 cut(s) | 352 |
| Bst1107I | GTATAC | 1 cut(s) | 94 |
| Bst4CI | ACNGT | 6 cut(s) | 115, 169, 221, 527, 586, 596 |
| Bst6I | CTCTTC | 1 cut(s) | 326 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 498 |
| BstC8I | GCNNGC | 2 cut(s) | 72, 301 |
| BstDEI | CTNAG | 2 cut(s) | 6, 473 |
| BstDSI | CCRYGG | 2 cut(s) | 217, 418 |
| BstEII | GGTNACC | 1 cut(s) | 521 |
| BstF5I | GGATG | 1 cut(s) | 429 |
| BstKTI | GATC | 4 cut(s) | 271, 294, 337, 547 |
| BstMAI | GTCTC | 1 cut(s) | 149 |
| BstMBI | GATC | 4 cut(s) | 268, 291, 334, 544 |
| BstMCI | CGRYCG | 1 cut(s) | 168 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 16, 498 |
| BstNSI | RCATGY | 3 cut(s) | 303, 372, 383 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 369 |
| BstPI | GGTNACC | 1 cut(s) | 521 |
| BstSCI | CCNGG | 1 cut(s) | 97 |
| BstV1I | GCAGC | 3 cut(s) | 28, 198, 501 |
| BstV2I | GAAGAC | 2 cut(s) | 116, 221 |
| BstX2I | RGATCY | 3 cut(s) | 268, 291, 334 |
| BstYI | RGATCY | 3 cut(s) | 268, 291, 334 |
| BstZ17I | GTATAC | 1 cut(s) | 94 |
| BsuI | GTATCC | 2 cut(s) | 269, 443 |
| BsuRI | GGCC | 1 cut(s) | 360 |
| BtgI | CCRYGG | 2 cut(s) | 217, 418 |
| BtsCI | GGATG | 1 cut(s) | 429 |
| BtsI | GCAGTG | 2 cut(s) | 39, 198 |
| BtsIMutI | CAGTG | 3 cut(s) | 39, 198, 409 |
| Cac8I | GCNNGC | 2 cut(s) | 72, 301 |
| Cfr13I | GGNCC | 2 cut(s) | 250, 582 |
| CseI | GACGC | 1 cut(s) | 374 |
| Csp6I | GTAC | 3 cut(s) | 58, 396, 528 |
| CviAII | CATG | 5 cut(s) | 296, 300, 369, 380, 385 |
| CviJI | RGCY | 7 cut(s) | 10, 19, 32, 176, 277, 360, 559 |
| CviKI_1 | RGCY | 7 cut(s) | 10, 19, 32, 176, 277, 360, 559 |
| CviQI | GTAC | 3 cut(s) | 58, 396, 528 |
| DdeI | CTNAG | 2 cut(s) | 6, 473 |
| DpnI | GATC | 4 cut(s) | 270, 293, 336, 546 |
| DpnII | GATC | 4 cut(s) | 268, 291, 334, 544 |
| Eam1104I | CTCTTC | 1 cut(s) | 326 |
| EarI | CTCTTC | 1 cut(s) | 326 |
| Eco130I | CCWWGG | 1 cut(s) | 352 |
| Eco47I | GGWCC | 2 cut(s) | 250, 582 |
| Eco91I | GGTNACC | 1 cut(s) | 521 |
| EcoO65I | GGTNACC | 1 cut(s) | 521 |
| EcoT14I | CCWWGG | 1 cut(s) | 352 |
| EcoT22I | ATGCAT | 2 cut(s) | 301, 381 |
| ErhI | CCWWGG | 1 cut(s) | 352 |
| FaeI | CATG | 5 cut(s) | 299, 303, 372, 383, 388 |
| FaqI | GGGAC | 1 cut(s) | 595 |
| FatI | CATG | 5 cut(s) | 295, 299, 368, 379, 384 |
| FauNDI | CATATG | 1 cut(s) | 541 |
| FbaI | TGATCA | 1 cut(s) | 544 |
| FblI | GTMKAC | 1 cut(s) | 93 |
| Fnu4HI | GCNGC | 4 cut(s) | 17, 212, 490, 557 |
| FokI | GGATG | 1 cut(s) | 436 |
| Fsp4HI | GCNGC | 4 cut(s) | 17, 212, 490, 557 |
| FspBI | CTAG | 1 cut(s) | 27 |
| GluI | GCNGC | 4 cut(s) | 17, 212, 490, 557 |
| HaeIII | GGCC | 1 cut(s) | 360 |
| HapII | CCGG | 1 cut(s) | 99 |
| HgaI | GACGC | 1 cut(s) | 374 |
| Hin1II | CATG | 5 cut(s) | 299, 303, 372, 383, 388 |
| HincII | GTYRAC | 1 cut(s) | 37 |
| HindII | GTYRAC | 1 cut(s) | 37 |
| HinfI | GANTC | 1 cut(s) | 85 |
| HpaII | CCGG | 1 cut(s) | 99 |
| HphI | GGTGA | 1 cut(s) | 515 |
| Hpy166II | GTNNAC | 2 cut(s) | 37, 94 |
| Hpy188I | TCNGA | 3 cut(s) | 108, 254, 375 |
| Hpy188III | TCNNGA | 6 cut(s) | 119, 262, 289, 338, 464, 548 |
| Hpy8I | GTNNAC | 2 cut(s) | 37, 94 |
| HpyAV | CCTTC | 4 cut(s) | 31, 166, 335, 545 |
| HpyCH4III | ACNGT | 6 cut(s) | 115, 169, 221, 527, 586, 596 |
| HpyCH4IV | ACGT | 2 cut(s) | 135, 438 |
| HpyCH4V | TGCA | 6 cut(s) | 16, 299, 303, 379, 501, 566 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 16, 498 |
| HpyF3I | CTNAG | 2 cut(s) | 6, 473 |
| HpySE526I | ACGT | 2 cut(s) | 135, 438 |
| Hsp92II | CATG | 5 cut(s) | 299, 303, 372, 383, 388 |
| KpnI | GGTACC | 1 cut(s) | 399 |
| Ksp22I | TGATCA | 1 cut(s) | 544 |
| Kzo9I | GATC | 4 cut(s) | 268, 291, 334, 544 |
| LmnI | GCTCC | 1 cut(s) | 486 |
| Lsp1109I | GCAGC | 3 cut(s) | 28, 198, 501 |
| LweI | GCATC | 4 cut(s) | 3, 198, 366, 553 |
| MaeI | CTAG | 1 cut(s) | 27 |
| MaeII | ACGT | 2 cut(s) | 135, 438 |
| MaeIII | GTNAC | 1 cut(s) | 521 |
| MalI | GATC | 4 cut(s) | 270, 293, 336, 546 |
| MboI | GATC | 4 cut(s) | 268, 291, 334, 544 |
| MboII | GAAGA | 4 cut(s) | 121, 154, 221, 313 |
| MflI | RGATCY | 3 cut(s) | 268, 291, 334 |
| MluCI | AATT | 2 cut(s) | 184, 515 |
| MlyI | GAGTC | 1 cut(s) | 79 |
| MmeI | TCCRAC | 1 cut(s) | 103 |
| MnlI | CCTC | 1 cut(s) | 475 |
| Mph1103I | ATGCAT | 2 cut(s) | 301, 381 |
| MseI | TTAA | 1 cut(s) | 147 |
| MspI | CCGG | 1 cut(s) | 99 |
| MspR9I | CCNGG | 1 cut(s) | 99 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 16, 498 |
| NciI | CCSGG | 1 cut(s) | 99 |
| NdeI | CATATG | 1 cut(s) | 541 |
| NdeII | GATC | 4 cut(s) | 268, 291, 334, 544 |
| NlaIII | CATG | 5 cut(s) | 299, 303, 372, 383, 388 |
| NlaIV | GGNNCC | 2 cut(s) | 397, 583 |
| NmuCI | GTSAC | 1 cut(s) | 521 |
| NsiI | ATGCAT | 2 cut(s) | 301, 381 |
| NspI | RCATGY | 3 cut(s) | 303, 372, 383 |
| PaeI | GCATGC | 1 cut(s) | 303 |
| PkrI | GCNGC | 4 cut(s) | 18, 213, 491, 558 |
| PleI | GAGTC | 1 cut(s) | 79 |
| PpsI | GAGTC | 1 cut(s) | 79 |
| PshAI | GACNNNNGTC | 1 cut(s) | 369 |
| Psp1406I | AACGTT | 1 cut(s) | 438 |
| PspEI | GGTNACC | 1 cut(s) | 521 |
| PspN4I | GGNNCC | 2 cut(s) | 397, 583 |
| PspPI | GGNCC | 2 cut(s) | 250, 582 |
| PsuI | RGATCY | 3 cut(s) | 268, 291, 334 |
| RsaI | GTAC | 3 cut(s) | 59, 397, 529 |
| RsaNI | GTAC | 3 cut(s) | 58, 396, 528 |
| SaqAI | TTAA | 1 cut(s) | 147 |
| SatI | GCNGC | 4 cut(s) | 17, 212, 490, 557 |
| Sau3AI | GATC | 4 cut(s) | 268, 291, 334, 544 |
| Sau96I | GGNCC | 2 cut(s) | 250, 582 |
| SchI | GAGTC | 1 cut(s) | 79 |
| ScrFI | CCNGG | 1 cut(s) | 99 |
| SetI | ASST | 5 cut(s) | 34, 138, 252, 354, 441 |
| SfaNI | GCATC | 4 cut(s) | 3, 198, 366, 553 |
| SinI | GGWCC | 2 cut(s) | 250, 582 |
| SphI | GCATGC | 1 cut(s) | 303 |
| Sse9I | AATT | 2 cut(s) | 184, 515 |
| SsiI | CCGC | 1 cut(s) | 556 |
| SspMI | CTAG | 1 cut(s) | 27 |
| StyD4I | CCNGG | 1 cut(s) | 97 |
| StyI | CCWWGG | 1 cut(s) | 352 |
| TaaI | ACNGT | 6 cut(s) | 115, 169, 221, 527, 586, 596 |
| TaiI | ACGT | 2 cut(s) | 138, 441 |
| TaqI | TCGA | 3 cut(s) | 164, 206, 561 |
| TasI | AATT | 2 cut(s) | 184, 515 |
| TatI | WGTACW | 1 cut(s) | 57 |
| TauI | GCSGC | 1 cut(s) | 559 |
| Tru1I | TTAA | 1 cut(s) | 147 |
| Tru9I | TTAA | 1 cut(s) | 147 |
| TscAI | CASTG | 3 cut(s) | 46, 205, 409 |
| TseFI | GTSAC | 1 cut(s) | 521 |
| TseI | GCWGC | 3 cut(s) | 16, 211, 489 |
| Tsp45I | GTSAC | 1 cut(s) | 521 |
| TspDTI | ATGAA | 1 cut(s) | 155 |
| TspRI | CASTG | 3 cut(s) | 46, 205, 409 |
| VpaK11BI | GGWCC | 2 cut(s) | 250, 582 |
| XceI | RCATGY | 3 cut(s) | 303, 372, 383 |
| XmiI | GTMKAC | 1 cut(s) | 93 |
| XspI | CTAG | 1 cut(s) | 27 |
| Zsp2I | ATGCAT | 2 cut(s) | 301, 381 |