ATP-dependent microtubule motor activity, plus-end-directed
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transpos_assoc | PF13963 | 3 - 77 | 2.1e-15 | Transposase-associated domain |
| Transposase_21 | PF02992 | 293 - 502 | 7.6e-96 | Transposase family tnp2 |
| DUF4218 | PF13960 | 691 - 803 | 1.3e-45 | Domain of unknown function (DUF4218) |
| DUF4216 | PF13952 | 980 - 1052 | 1.5e-18 | Domain of unknown function (DUF4216) |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 1122, 1142 |
| Acc36I | ACCTGC | 1 cut(s) | 2213 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 944 |
| AccI | GTMKAC | 1 cut(s) | 3191 |
| AccII | CGCG | 1 cut(s) | 1539 |
| AciI | CCGC | 7 cut(s) | 409, 720, 958, 1046, 1241, 1883, 2852 |
| AclI | AACGTT | 1 cut(s) | 2964 |
| AclWI | GGATC | 5 cut(s) | 1416, 2693, 3131, 3144, 3183 |
| AcoI | YGGCCR | 4 cut(s) | 880, 1031, 2396, 2809 |
| AcsI | RAATTY | 4 cut(s) | 538, 626, 932, 1454 |
| AcuI | CTGAAG | 3 cut(s) | 378, 2343, 2733 |
| AdeI | CACNNNGTG | 1 cut(s) | 2477 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 183, 719, 944, 1405, 1481, 2897 |
| AflII | CTTAAG | 1 cut(s) | 548 |
| AflIII | ACRYGT | 1 cut(s) | 2671 |
| AjiI | CACGTC | 1 cut(s) | 529 |
| AjnI | CCWGG | 6 cut(s) | 242, 258, 334, 451, 1111, 1381 |
| Alw21I | GWGCWC | 2 cut(s) | 1511, 2943 |
| Alw26I | GTCTC | 4 cut(s) | 575, 831, 1217, 2367 |
| AlwI | GGATC | 5 cut(s) | 1416, 2693, 3131, 3144, 3183 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 265 |
| ApeKI | GCWGC | 6 cut(s) | 1541, 2027, 2076, 2213, 2480, 2686 |
| ApoI | RAATTY | 4 cut(s) | 538, 626, 932, 1454 |
| AseI | ATTAAT | 1 cut(s) | 1160 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 315, 2100 |
| AspA2I | CCTAGG | 1 cut(s) | 3170 |
| AspLEI | GCGC | 2 cut(s) | 1541, 2406 |
| AspS9I | GGNCC | 8 cut(s) | 262, 358, 1115, 1124, 1254, 1484, 2225, 2738 |
| AsuC2I | CCSGG | 2 cut(s) | 1128, 1725 |
| AvaII | GGWCC | 7 cut(s) | 358, 1115, 1124, 1254, 1484, 2225, 2738 |
| AvrII | CCTAGG | 1 cut(s) | 3170 |
| BaeGI | GKGCMC | 1 cut(s) | 1573 |
| BalI | TGGCCA | 2 cut(s) | 1033, 2811 |
| BamHI | GGATCC | 1 cut(s) | 3136 |
| BanII | GRGCYC | 1 cut(s) | 2943 |
| BauI | CACGAG | 1 cut(s) | 1566 |
| BbsI | GAAGAC | 3 cut(s) | 1138, 2721, 3132 |
| Bbv12I | GWGCWC | 2 cut(s) | 1511, 2943 |
| BbvI | GCAGC | 6 cut(s) | 1553, 2039, 2088, 2200, 2467, 2698 |
| BceAI | ACGGC | 2 cut(s) | 852, 895 |
| BciT130I | CCWGG | 6 cut(s) | 244, 260, 336, 453, 1113, 1383 |
| BciVI | GTATCC | 1 cut(s) | 1389 |
| BcnI | CCSGG | 2 cut(s) | 1128, 1725 |
| BcoDI | GTCTC | 4 cut(s) | 575, 831, 1217, 2367 |
| BfaI | CTAG | 7 cut(s) | 320, 485, 804, 1797, 2523, 2549, 3171 |
| BfmI | CTRYAG | 4 cut(s) | 897, 2025, 2481, 2755 |
| BfrI | CTTAAG | 1 cut(s) | 548 |
| BfuAI | ACCTGC | 1 cut(s) | 2213 |
| BfuI | GTATCC | 1 cut(s) | 1389 |
| BisI | GCNGC | 8 cut(s) | 409, 1242, 1542, 2028, 2077, 2214, 2481, 2687 |
| BlnI | CCTAGG | 1 cut(s) | 3170 |
| BlsI | GCNGC | 8 cut(s) | 410, 1243, 1543, 2029, 2078, 2215, 2482, 2688 |
| BmcAI | AGTACT | 1 cut(s) | 1300 |
| Bme1390I | CCNGG | 8 cut(s) | 244, 260, 336, 453, 1113, 1128, 1383, 1725 |
| Bme18I | GGWCC | 7 cut(s) | 358, 1115, 1124, 1254, 1484, 2225, 2738 |
| BmgBI | CACGTC | 1 cut(s) | 529 |
| BmgT120I | GGNCC | 8 cut(s) | 262, 358, 1115, 1124, 1254, 1484, 2225, 2738 |
| BmiI | GGNNCC | 6 cut(s) | 360, 801, 1126, 1155, 3138, 3261 |
| BmrFI | CCNGG | 8 cut(s) | 244, 260, 336, 453, 1113, 1128, 1383, 1725 |
| BmrI | ACTGGG | 1 cut(s) | 2697 |
| BmsI | GCATC | 8 cut(s) | 98, 446, 1198, 1620, 1648, 2325, 2610, 3104 |
| BmuI | ACTGGG | 1 cut(s) | 2697 |
| BoxI | GACNNNNGTC | 2 cut(s) | 531, 657 |
| BpiI | GAAGAC | 3 cut(s) | 1138, 2721, 3132 |
| BpmI | CTGGAG | 2 cut(s) | 261, 357 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1172 |
| BpuEI | CTTGAG | 2 cut(s) | 856, 1104 |
| BpuMI | CCSGG | 2 cut(s) | 1128, 1725 |
| BsaAI | YACGTR | 2 cut(s) | 344, 1919 |
| BsaBI | GATNNNNATC | 2 cut(s) | 330, 600 |
| BsaI | GGTCTC | 1 cut(s) | 1217 |
| BsaWI | WCCGGW | 1 cut(s) | 2787 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1455, 1485, 1775, 1805, 2138, 2168 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 183, 719, 944, 1405, 1481, 2897 |
| Bse1I | ACTGG | 9 cut(s) | 55, 1034, 1322, 1379, 1522, 2228, 2703, 2812, 3048 |
| Bse3DI | GCAATG | 3 cut(s) | 542, 2172, 2921 |
| Bse8I | GATNNNNATC | 2 cut(s) | 330, 600 |
| BseBI | CCWGG | 6 cut(s) | 244, 260, 336, 453, 1113, 1383 |
| BseGI | GGATG | 9 cut(s) | 187, 192, 461, 892, 2157, 2250, 2902, 2935, 3095 |
| BseJI | GATNNNNATC | 2 cut(s) | 330, 600 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 183, 719, 944, 1405, 1481, 2897 |
| BseMI | GCAATG | 3 cut(s) | 542, 2172, 2921 |
| BseMII | CTCAG | 2 cut(s) | 46, 785 |
| BseNI | ACTGG | 9 cut(s) | 55, 1034, 1322, 1379, 1522, 2228, 2703, 2812, 3048 |
| BseRI | GAGGAG | 1 cut(s) | 2472 |
| BseSI | GKGCMC | 1 cut(s) | 1573 |
| BseXI | GCAGC | 6 cut(s) | 1553, 2039, 2088, 2200, 2467, 2698 |
| BseYI | CCCAGC | 1 cut(s) | 12 |
| BsgI | GTGCAG | 2 cut(s) | 2095, 2571 |
| Bsh1236I | CGCG | 1 cut(s) | 1539 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1511, 2943 |
| BsiSI | CCGG | 4 cut(s) | 1128, 1271, 1724, 2788 |
| BslFI | GGGAC | 3 cut(s) | 21, 269, 1110 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 183, 719, 944, 1405, 1481, 2897 |
| BsmAI | GTCTC | 4 cut(s) | 575, 831, 1217, 2367 |
| BsmFI | GGGAC | 3 cut(s) | 21, 269, 1110 |
| BsmI | GAATGC | 2 cut(s) | 672, 1753 |
| Bso31I | GGTCTC | 1 cut(s) | 1217 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1511, 1573, 2943 |
| Bsp143I | GATC | 8 cut(s) | 325, 648, 1408, 2525, 2698, 3073, 3136, 3175 |
| Bsp19I | CCATGG | 1 cut(s) | 1404 |
| BspACI | CCGC | 7 cut(s) | 409, 720, 958, 1046, 1241, 1883, 2852 |
| BspCNI | CTCAG | 2 cut(s) | 45, 784 |
| BspFNI | CGCG | 1 cut(s) | 1539 |
| BspHI | TCATGA | 1 cut(s) | 742 |
| BspLI | GGNNCC | 6 cut(s) | 360, 801, 1126, 1155, 3138, 3261 |
| BspMAI | CTGCAG | 3 cut(s) | 901, 2029, 2485 |
| BspMI | ACCTGC | 1 cut(s) | 2213 |
| BspPI | GGATC | 5 cut(s) | 1416, 2693, 3131, 3144, 3183 |
| BspTI | CTTAAG | 1 cut(s) | 548 |
| BspTNI | GGTCTC | 1 cut(s) | 1217 |
| BsrDI | GCAATG | 3 cut(s) | 542, 2172, 2921 |
| BsrI | ACTGG | 9 cut(s) | 55, 1034, 1322, 1379, 1522, 2228, 2703, 2812, 3048 |
| BssMI | GATC | 8 cut(s) | 325, 648, 1408, 2525, 2698, 3073, 3136, 3175 |
| BssSI | CACGAG | 1 cut(s) | 1566 |
| BssT1I | CCWWGG | 5 cut(s) | 212, 1404, 1595, 2892, 3170 |
| Bst2BI | CACGAG | 1 cut(s) | 1566 |
| Bst2UI | CCWGG | 6 cut(s) | 244, 260, 336, 453, 1113, 1383 |
| Bst4CI | ACNGT | 7 cut(s) | 695, 707, 1592, 1697, 2469, 2960, 3144 |
| Bst6I | CTCTTC | 4 cut(s) | 423, 1215, 2481, 3185 |
| BstAFI | CTTAAG | 1 cut(s) | 548 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2751 |
| BstBAI | YACGTR | 2 cut(s) | 344, 1919 |
| BstC8I | GCNNGC | 9 cut(s) | 266, 461, 858, 1044, 1239, 1314, 1753, 2625, 3111 |
| BstDEI | CTNAG | 9 cut(s) | 32, 771, 1172, 1302, 1355, 1734, 1756, 2200, 2368 |
| BstDSI | CCRYGG | 4 cut(s) | 177, 1064, 1404, 3143 |
| BstF5I | GGATG | 9 cut(s) | 187, 192, 461, 892, 2157, 2250, 2902, 2935, 3095 |
| BstFNI | CGCG | 1 cut(s) | 1539 |
| BstHHI | GCGC | 2 cut(s) | 1541, 2406 |
| BstKTI | GATC | 8 cut(s) | 328, 651, 1411, 2528, 2701, 3076, 3139, 3178 |
| BstMAI | GTCTC | 4 cut(s) | 575, 831, 1217, 2367 |
| BstMBI | GATC | 8 cut(s) | 325, 648, 1408, 2525, 2698, 3073, 3136, 3175 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 717, 1039, 1968, 2210, 2219, 2751, 3101, 3110 |
| BstNI | CCWGG | 6 cut(s) | 244, 260, 336, 453, 1113, 1383 |
| BstNSI | RCATGY | 8 cut(s) | 660, 860, 1316, 1320, 1676, 1931, 2675, 3152 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 531, 657 |
| BstSCI | CCNGG | 8 cut(s) | 242, 258, 334, 451, 1111, 1126, 1381, 1723 |
| BstSFI | CTRYAG | 4 cut(s) | 897, 2025, 2481, 2755 |
| BstSLI | GKGCMC | 1 cut(s) | 1573 |
| BstUI | CGCG | 1 cut(s) | 1539 |
| BstV1I | GCAGC | 6 cut(s) | 1553, 2039, 2088, 2200, 2467, 2698 |
| BstV2I | GAAGAC | 3 cut(s) | 1138, 2721, 3132 |
| BstX2I | RGATCY | 2 cut(s) | 3136, 3175 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 616 |
| BstYI | RGATCY | 2 cut(s) | 3136, 3175 |
| BsuI | GTATCC | 1 cut(s) | 1389 |
| BtgI | CCRYGG | 4 cut(s) | 177, 1064, 1404, 3143 |
| BtgZI | GCGATG | 1 cut(s) | 2302 |
| BtrI | CACGTC | 1 cut(s) | 529 |
| BtsCI | GGATG | 9 cut(s) | 187, 192, 461, 892, 2157, 2250, 2902, 2935, 3095 |
| BtsI | GCAGTG | 1 cut(s) | 584 |
| BtsIMutI | CAGTG | 8 cut(s) | 529, 584, 700, 1372, 1449, 1702, 2710, 3041 |
| BveI | ACCTGC | 1 cut(s) | 2213 |
| Cac8I | GCNNGC | 9 cut(s) | 266, 461, 858, 1044, 1239, 1314, 1753, 2625, 3111 |
| CaiI | CAGNNNCTG | 1 cut(s) | 265 |
| CciI | TCATGA | 1 cut(s) | 742 |
| CfoI | GCGC | 2 cut(s) | 1541, 2406 |
| Cfr13I | GGNCC | 8 cut(s) | 262, 358, 1115, 1124, 1254, 1484, 2225, 2738 |
| CseI | GACGC | 2 cut(s) | 662, 878 |
| DdeI | CTNAG | 9 cut(s) | 32, 771, 1172, 1302, 1355, 1734, 1756, 2200, 2368 |
| DpnI | GATC | 8 cut(s) | 327, 650, 1410, 2527, 2700, 3075, 3138, 3177 |
| DpnII | GATC | 8 cut(s) | 325, 648, 1408, 2525, 2698, 3073, 3136, 3175 |
| DraI | TTTAAA | 1 cut(s) | 46 |
| DraIII | CACNNNGTG | 1 cut(s) | 2477 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1122, 1142 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1122, 1142 |
| EaeI | YGGCCR | 4 cut(s) | 880, 1031, 2396, 2809 |
| Eam1104I | CTCTTC | 4 cut(s) | 423, 1215, 2481, 3185 |
| EarI | CTCTTC | 4 cut(s) | 423, 1215, 2481, 3185 |
| Ecl136II | GAGCTC | 1 cut(s) | 2941 |
| Eco130I | CCWWGG | 5 cut(s) | 212, 1404, 1595, 2892, 3170 |
| Eco147I | AGGCCT | 1 cut(s) | 242 |
| Eco24I | GRGCYC | 1 cut(s) | 2943 |
| Eco31I | GGTCTC | 1 cut(s) | 1217 |
| Eco47I | GGWCC | 7 cut(s) | 358, 1115, 1124, 1254, 1484, 2225, 2738 |
| Eco53kI | GAGCTC | 1 cut(s) | 2941 |
| Eco57I | CTGAAG | 3 cut(s) | 378, 2343, 2733 |
| EcoICRI | GAGCTC | 1 cut(s) | 2941 |
| EcoO109I | RGGNCCY | 3 cut(s) | 262, 358, 1124 |
| EcoRI | GAATTC | 1 cut(s) | 538 |
| EcoRII | CCWGG | 6 cut(s) | 242, 258, 334, 451, 1111, 1381 |
| EcoT14I | CCWWGG | 5 cut(s) | 212, 1404, 1595, 2892, 3170 |
| EcoT22I | ATGCAT | 3 cut(s) | 1076, 1318, 1674 |
| EcoT38I | GRGCYC | 1 cut(s) | 2943 |
| ErhI | CCWWGG | 5 cut(s) | 212, 1404, 1595, 2892, 3170 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1772, 1804, 2202, 2234, 2427, 2459, 2734, 2766 |
| FaqI | GGGAC | 3 cut(s) | 21, 269, 1110 |
| FauNDI | CATATG | 5 cut(s) | 640, 1008, 1204, 2235, 2530 |
| FblI | GTMKAC | 1 cut(s) | 3191 |
| Fnu4HI | GCNGC | 8 cut(s) | 409, 1242, 1542, 2028, 2077, 2214, 2481, 2687 |
| FokI | GGATG | 9 cut(s) | 194, 199, 468, 879, 2164, 2257, 2909, 2942, 3082 |
| FriOI | GRGCYC | 1 cut(s) | 2943 |
| Fsp4HI | GCNGC | 8 cut(s) | 409, 1242, 1542, 2028, 2077, 2214, 2481, 2687 |
| FspBI | CTAG | 7 cut(s) | 320, 485, 804, 1797, 2523, 2549, 3171 |
| GlaI | GCGC | 2 cut(s) | 1540, 2405 |
| GluI | GCNGC | 8 cut(s) | 409, 1242, 1542, 2028, 2077, 2214, 2481, 2687 |
| GsaI | CCCAGC | 1 cut(s) | 16 |
| GsuI | CTGGAG | 2 cut(s) | 261, 357 |
| HapII | CCGG | 4 cut(s) | 1128, 1271, 1724, 2788 |
| HgaI | GACGC | 2 cut(s) | 662, 878 |
| HhaI | GCGC | 2 cut(s) | 1541, 2406 |
| Hin6I | GCGC | 2 cut(s) | 1539, 2404 |
| HinP1I | GCGC | 2 cut(s) | 1539, 2404 |
| HincII | GTYRAC | 6 cut(s) | 636, 1588, 1933, 2538, 2647, 3192 |
| HindII | GTYRAC | 6 cut(s) | 636, 1588, 1933, 2538, 2647, 3192 |
| HindIII | AAGCTT | 1 cut(s) | 3102 |
| HpaII | CCGG | 4 cut(s) | 1128, 1271, 1724, 2788 |
| Hpy188I | TCNGA | 9 cut(s) | 397, 537, 774, 968, 1348, 1421, 2292, 3050, 3274 |
| Hpy99I | CGWCG | 2 cut(s) | 656, 1395 |
| HpyAV | CCTTC | 6 cut(s) | 326, 402, 1237, 2318, 2429, 2998 |
| HpyCH4III | ACNGT | 7 cut(s) | 695, 707, 1592, 1697, 2469, 2960, 3144 |
| HpyCH4IV | ACGT | 4 cut(s) | 343, 528, 1918, 2964 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 717, 1039, 1968, 2210, 2219, 2751, 3101, 3110 |
| HpyF3I | CTNAG | 9 cut(s) | 32, 771, 1172, 1302, 1355, 1734, 1756, 2200, 2368 |
| HpySE526I | ACGT | 4 cut(s) | 343, 528, 1918, 2964 |
| HspAI | GCGC | 2 cut(s) | 1539, 2404 |
| Kzo9I | GATC | 8 cut(s) | 325, 648, 1408, 2525, 2698, 3073, 3136, 3175 |
| LmnI | GCTCC | 6 cut(s) | 280, 805, 1153, 1636, 2563, 2946 |
| Lsp1109I | GCAGC | 6 cut(s) | 1553, 2039, 2088, 2200, 2467, 2698 |
| LweI | GCATC | 8 cut(s) | 98, 446, 1198, 1620, 1648, 2325, 2610, 3104 |
| MaeI | CTAG | 7 cut(s) | 320, 485, 804, 1797, 2523, 2549, 3171 |
| MaeII | ACGT | 4 cut(s) | 343, 528, 1918, 2964 |
| MalI | GATC | 8 cut(s) | 327, 650, 1410, 2527, 2700, 3075, 3138, 3177 |
| MboI | GATC | 8 cut(s) | 325, 648, 1408, 2525, 2698, 3073, 3136, 3175 |
| MfeI | CAATTG | 1 cut(s) | 2253 |
| MflI | RGATCY | 2 cut(s) | 3136, 3175 |
| MhlI | GDGCHC | 3 cut(s) | 1511, 1573, 2943 |
| MlsI | TGGCCA | 2 cut(s) | 1033, 2811 |
| MluNI | TGGCCA | 2 cut(s) | 1033, 2811 |
| MlyI | GAGTC | 4 cut(s) | 203, 719, 2401, 3074 |
| MmeI | TCCRAC | 2 cut(s) | 1274, 2541 |
| Mox20I | TGGCCA | 2 cut(s) | 1033, 2811 |
| Mph1103I | ATGCAT | 3 cut(s) | 1076, 1318, 1674 |
| MroXI | GAANNNNTTC | 2 cut(s) | 315, 2100 |
| MscI | TGGCCA | 2 cut(s) | 1033, 2811 |
| MslI | CAYNNNNRTG | 4 cut(s) | 176, 1094, 2387, 2676 |
| Msp20I | TGGCCA | 2 cut(s) | 1033, 2811 |
| MspCI | CTTAAG | 1 cut(s) | 548 |
| MspI | CCGG | 4 cut(s) | 1128, 1271, 1724, 2788 |
| MspR9I | CCNGG | 8 cut(s) | 244, 260, 336, 453, 1113, 1128, 1383, 1725 |
| MunI | CAATTG | 1 cut(s) | 2253 |
| Mva1269I | GAATGC | 2 cut(s) | 672, 1753 |
| MvaI | CCWGG | 6 cut(s) | 244, 260, 336, 453, 1113, 1383 |
| MvnI | CGCG | 1 cut(s) | 1539 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 717, 1039, 1968, 2210, 2219, 2751, 3101, 3110 |
| NciI | CCSGG | 2 cut(s) | 1128, 1725 |
| NcoI | CCATGG | 1 cut(s) | 1404 |
| NdeI | CATATG | 5 cut(s) | 640, 1008, 1204, 2235, 2530 |
| NdeII | GATC | 8 cut(s) | 325, 648, 1408, 2525, 2698, 3073, 3136, 3175 |
| NlaIV | GGNNCC | 6 cut(s) | 360, 801, 1126, 1155, 3138, 3261 |
| NmuCI | GTSAC | 7 cut(s) | 344, 524, 722, 875, 2469, 3077, 3245 |
| NsiI | ATGCAT | 3 cut(s) | 1076, 1318, 1674 |
| NspI | RCATGY | 8 cut(s) | 660, 860, 1316, 1320, 1676, 1931, 2675, 3152 |
| PacI | TTAATTAA | 1 cut(s) | 558 |
| PaeI | GCATGC | 2 cut(s) | 860, 1316 |
| PagI | TCATGA | 1 cut(s) | 742 |
| PceI | AGGCCT | 1 cut(s) | 242 |
| PciI | ACATGT | 1 cut(s) | 2671 |
| PctI | GAATGC | 2 cut(s) | 672, 1753 |
| PdmI | GAANNNNTTC | 2 cut(s) | 315, 2100 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 944 |
| PfoI | TCCNGGA | 2 cut(s) | 334, 451 |
| PkrI | GCNGC | 8 cut(s) | 410, 1243, 1543, 2029, 2078, 2215, 2482, 2688 |
| PleI | GAGTC | 4 cut(s) | 202, 719, 2400, 3074 |
| PpsI | GAGTC | 4 cut(s) | 202, 719, 2400, 3074 |
| Ppu21I | YACGTR | 2 cut(s) | 344, 1919 |
| PpuMI | RGGWCCY | 2 cut(s) | 358, 1124 |
| PscI | ACATGT | 1 cut(s) | 2671 |
| PshAI | GACNNNNGTC | 2 cut(s) | 531, 657 |
| PshBI | ATTAAT | 1 cut(s) | 1160 |
| Psp124BI | GAGCTC | 1 cut(s) | 2943 |
| Psp1406I | AACGTT | 1 cut(s) | 2964 |
| Psp5II | RGGWCCY | 2 cut(s) | 358, 1124 |
| Psp6I | CCWGG | 6 cut(s) | 242, 258, 334, 451, 1111, 1381 |
| PspFI | CCCAGC | 1 cut(s) | 12 |
| PspGI | CCWGG | 6 cut(s) | 242, 258, 334, 451, 1111, 1381 |
| PspN4I | GGNNCC | 6 cut(s) | 360, 801, 1126, 1155, 3138, 3261 |
| PspPI | GGNCC | 8 cut(s) | 262, 358, 1115, 1124, 1254, 1484, 2225, 2738 |
| PspPPI | RGGWCCY | 2 cut(s) | 358, 1124 |
| PstI | CTGCAG | 3 cut(s) | 901, 2029, 2485 |
| PstNI | CAGNNNCTG | 1 cut(s) | 265 |
| PsuI | RGATCY | 2 cut(s) | 3136, 3175 |
| RseI | CAYNNNNRTG | 4 cut(s) | 176, 1094, 2387, 2676 |
| SacI | GAGCTC | 1 cut(s) | 2943 |
| SalI | GTCGAC | 1 cut(s) | 3190 |
| SatI | GCNGC | 8 cut(s) | 409, 1242, 1542, 2028, 2077, 2214, 2481, 2687 |
| Sau3AI | GATC | 8 cut(s) | 325, 648, 1408, 2525, 2698, 3073, 3136, 3175 |
| Sau96I | GGNCC | 8 cut(s) | 262, 358, 1115, 1124, 1254, 1484, 2225, 2738 |
| ScaI | AGTACT | 1 cut(s) | 1300 |
| SchI | GAGTC | 4 cut(s) | 203, 719, 2401, 3074 |
| ScrFI | CCNGG | 8 cut(s) | 244, 260, 336, 453, 1113, 1128, 1383, 1725 |
| SduI | GDGCHC | 3 cut(s) | 1511, 1573, 2943 |
| SfaNI | GCATC | 8 cut(s) | 98, 446, 1198, 1620, 1648, 2325, 2610, 3104 |
| SfcI | CTRYAG | 4 cut(s) | 897, 2025, 2481, 2755 |
| SinI | GGWCC | 7 cut(s) | 358, 1115, 1124, 1254, 1484, 2225, 2738 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 176, 1094, 2387, 2676 |
| SmlI | CTYRAG | 3 cut(s) | 548, 871, 1119 |
| SmoI | CTYRAG | 3 cut(s) | 548, 871, 1119 |
| SphI | GCATGC | 2 cut(s) | 860, 1316 |
| SseBI | AGGCCT | 1 cut(s) | 242 |
| SsiI | CCGC | 7 cut(s) | 409, 720, 958, 1046, 1241, 1883, 2852 |
| SspI | AATATT | 1 cut(s) | 1912 |
| SspMI | CTAG | 7 cut(s) | 320, 485, 804, 1797, 2523, 2549, 3171 |
| SstI | GAGCTC | 1 cut(s) | 2943 |
| StuI | AGGCCT | 1 cut(s) | 242 |
| StyD4I | CCNGG | 8 cut(s) | 242, 258, 334, 451, 1111, 1126, 1381, 1723 |
| StyI | CCWWGG | 5 cut(s) | 212, 1404, 1595, 2892, 3170 |
| TaaI | ACNGT | 7 cut(s) | 695, 707, 1592, 1697, 2469, 2960, 3144 |
| TaiI | ACGT | 4 cut(s) | 346, 531, 1921, 2967 |
| TaqI | TCGA | 7 cut(s) | 162, 651, 1393, 2302, 3010, 3183, 3191 |
| TatI | WGTACW | 5 cut(s) | 690, 1013, 1298, 2364, 2968 |
| TauI | GCSGC | 2 cut(s) | 411, 1244 |
| TscAI | CASTG | 8 cut(s) | 529, 591, 700, 1379, 1456, 1702, 2710, 3048 |
| TseFI | GTSAC | 7 cut(s) | 344, 524, 722, 875, 2469, 3077, 3245 |
| TseI | GCWGC | 6 cut(s) | 1541, 2027, 2076, 2213, 2480, 2686 |
| Tsp45I | GTSAC | 7 cut(s) | 344, 524, 722, 875, 2469, 3077, 3245 |
| TspGWI | ACGGA | 5 cut(s) | 105, 166, 1053, 2393, 2751 |
| TspRI | CASTG | 8 cut(s) | 529, 591, 700, 1379, 1456, 1702, 2710, 3048 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 944 |
| Vha464I | CTTAAG | 1 cut(s) | 548 |
| VpaK11BI | GGWCC | 7 cut(s) | 358, 1115, 1124, 1254, 1484, 2225, 2738 |
| VspI | ATTAAT | 1 cut(s) | 1160 |
| XapI | RAATTY | 4 cut(s) | 538, 626, 932, 1454 |
| XbaI | TCTAGA | 1 cut(s) | 319 |
| XceI | RCATGY | 8 cut(s) | 660, 860, 1316, 1320, 1676, 1931, 2675, 3152 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2899 |
| XmaJI | CCTAGG | 1 cut(s) | 3170 |
| XmiI | GTMKAC | 1 cut(s) | 3191 |
| XmnI | GAANNNNTTC | 2 cut(s) | 315, 2100 |
| XspI | CTAG | 7 cut(s) | 320, 485, 804, 1797, 2523, 2549, 3171 |
| ZrmI | AGTACT | 1 cut(s) | 1300 |
| Zsp2I | ATGCAT | 3 cut(s) | 1076, 1318, 1674 |