source UniProtKB
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 787 |
| AccB1I | GGYRCC | 2 cut(s) | 219, 787 |
| AccI | GTMKAC | 1 cut(s) | 837 |
| AclWI | GGATC | 1 cut(s) | 1687 |
| AcsI | RAATTY | 2 cut(s) | 862, 1669 |
| AcuI | CTGAAG | 1 cut(s) | 246 |
| AfaI | GTAC | 4 cut(s) | 71, 789, 1260, 1734 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1629, 1728, 1729 |
| AflII | CTTAAG | 1 cut(s) | 1502 |
| AgeI | ACCGGT | 1 cut(s) | 1484 |
| AjnI | CCWGG | 3 cut(s) | 597, 1117, 1723 |
| Alw26I | GTCTC | 2 cut(s) | 1064, 1244 |
| AlwI | GGATC | 1 cut(s) | 1687 |
| AoxI | GGCC | 2 cut(s) | 1458, 1719 |
| ApeKI | GCWGC | 5 cut(s) | 1292, 1307, 1427, 1604, 1763 |
| ApoI | RAATTY | 2 cut(s) | 862, 1669 |
| AsiGI | ACCGGT | 1 cut(s) | 1484 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 191 |
| Asp718I | GGTACC | 1 cut(s) | 787 |
| AspS9I | GGNCC | 4 cut(s) | 143, 563, 1459, 1720 |
| AsuC2I | CCSGG | 1 cut(s) | 1150 |
| AsuHPI | GGTGA | 5 cut(s) | 217, 871, 1103, 1673, 1831 |
| AsuII | TTCGAA | 1 cut(s) | 479 |
| AvaII | GGWCC | 2 cut(s) | 143, 563 |
| AxyI | CCTNAGG | 1 cut(s) | 1716 |
| BaeGI | GKGCMC | 1 cut(s) | 882 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1242, 1275 |
| BanI | GGYRCC | 2 cut(s) | 219, 787 |
| BbsI | GAAGAC | 1 cut(s) | 1812 |
| BbvI | GCAGC | 5 cut(s) | 1294, 1304, 1439, 1616, 1750 |
| BccI | CCATC | 7 cut(s) | 88, 153, 195, 543, 547, 1069, 1507 |
| BciT130I | CCWGG | 3 cut(s) | 599, 1119, 1725 |
| BciVI | GTATCC | 3 cut(s) | 177, 587, 1408 |
| BclI | TGATCA | 1 cut(s) | 1096 |
| BcnI | CCSGG | 1 cut(s) | 1150 |
| BcoDI | GTCTC | 2 cut(s) | 1064, 1244 |
| BfaI | CTAG | 2 cut(s) | 717, 1173 |
| BfmI | CTRYAG | 3 cut(s) | 1179, 1493, 1800 |
| BfrI | CTTAAG | 1 cut(s) | 1502 |
| BfuI | GTATCC | 3 cut(s) | 177, 587, 1408 |
| BisI | GCNGC | 5 cut(s) | 1293, 1308, 1428, 1605, 1764 |
| BlpI | GCTNAGC | 1 cut(s) | 1281 |
| BlsI | GCNGC | 5 cut(s) | 1294, 1309, 1429, 1606, 1765 |
| BmcAI | AGTACT | 1 cut(s) | 71 |
| Bme1390I | CCNGG | 4 cut(s) | 599, 1119, 1150, 1725 |
| Bme18I | GGWCC | 2 cut(s) | 143, 563 |
| BmgT120I | GGNCC | 4 cut(s) | 143, 563, 1459, 1720 |
| BmiI | GGNNCC | 6 cut(s) | 221, 789, 1146, 1461, 1590, 1722 |
| BmrFI | CCNGG | 4 cut(s) | 599, 1119, 1150, 1725 |
| BpiI | GAAGAC | 1 cut(s) | 1812 |
| BpmI | CTGGAG | 1 cut(s) | 1140 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1608 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1281 |
| Bpu14I | TTCGAA | 1 cut(s) | 479 |
| BpuEI | CTTGAG | 3 cut(s) | 1311, 1566, 1834 |
| BpuMI | CCSGG | 1 cut(s) | 1150 |
| BsaJI | CCNNGG | 3 cut(s) | 624, 1148, 1723 |
| BsaWI | WCCGGW | 1 cut(s) | 1484 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 362, 392, 1604, 1634 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1629, 1728, 1729 |
| Bse118I | RCCGGY | 1 cut(s) | 1484 |
| Bse1I | ACTGG | 2 cut(s) | 146, 488 |
| Bse21I | CCTNAGG | 1 cut(s) | 1716 |
| Bse3DI | GCAATG | 5 cut(s) | 690, 959, 1055, 1199, 1860 |
| BseBI | CCWGG | 3 cut(s) | 599, 1119, 1725 |
| BseDI | CCNNGG | 3 cut(s) | 624, 1148, 1723 |
| BseGI | GGATG | 8 cut(s) | 80, 168, 206, 379, 558, 1197, 1379, 1518 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1629, 1728, 1729 |
| BseMI | GCAATG | 5 cut(s) | 690, 959, 1055, 1199, 1860 |
| BseMII | CTCAG | 2 cut(s) | 1295, 1707 |
| BseNI | ACTGG | 2 cut(s) | 146, 488 |
| BseRI | GAGGAG | 1 cut(s) | 1025 |
| BseSI | GKGCMC | 1 cut(s) | 882 |
| BseXI | GCAGC | 5 cut(s) | 1294, 1304, 1439, 1616, 1750 |
| BshFI | GGCC | 2 cut(s) | 1460, 1721 |
| BshNI | GGYRCC | 2 cut(s) | 219, 787 |
| BshTI | ACCGGT | 1 cut(s) | 1484 |
| BsiSI | CCGG | 2 cut(s) | 1150, 1485 |
| BslFI | GGGAC | 1 cut(s) | 1646 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1629, 1728, 1729 |
| BsmAI | GTCTC | 2 cut(s) | 1064, 1244 |
| BsmFI | GGGAC | 1 cut(s) | 1646 |
| BsnI | GGCC | 2 cut(s) | 1460, 1721 |
| Bsp119I | TTCGAA | 1 cut(s) | 479 |
| Bsp1286I | GDGCHC | 1 cut(s) | 882 |
| Bsp143I | GATC | 4 cut(s) | 644, 1096, 1224, 1679 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1281 |
| BspANI | GGCC | 2 cut(s) | 1460, 1721 |
| BspCNI | CTCAG | 2 cut(s) | 1294, 1708 |
| BspHI | TCATGA | 1 cut(s) | 96 |
| BspLI | GGNNCC | 6 cut(s) | 221, 789, 1146, 1461, 1590, 1722 |
| BspPI | GGATC | 1 cut(s) | 1687 |
| BspT104I | TTCGAA | 1 cut(s) | 479 |
| BspT107I | GGYRCC | 2 cut(s) | 219, 787 |
| BspTI | CTTAAG | 1 cut(s) | 1502 |
| BsrDI | GCAATG | 5 cut(s) | 690, 959, 1055, 1199, 1860 |
| BsrFI | RCCGGY | 1 cut(s) | 1484 |
| BsrI | ACTGG | 2 cut(s) | 146, 488 |
| BssAI | RCCGGY | 1 cut(s) | 1484 |
| BssECI | CCNNGG | 3 cut(s) | 624, 1148, 1723 |
| BssMI | GATC | 4 cut(s) | 644, 1096, 1224, 1679 |
| BssT1I | CCWWGG | 1 cut(s) | 624 |
| Bst2UI | CCWGG | 3 cut(s) | 599, 1119, 1725 |
| Bst4CI | ACNGT | 5 cut(s) | 52, 112, 659, 1041, 1497 |
| Bst6I | CTCTTC | 5 cut(s) | 252, 1242, 1464, 1823, 1839 |
| BstAFI | CTTAAG | 1 cut(s) | 1502 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1433 |
| BstBI | TTCGAA | 1 cut(s) | 479 |
| BstC8I | GCNNGC | 4 cut(s) | 33, 59, 1407, 1761 |
| BstDEI | CTNAG | 7 cut(s) | 426, 901, 1187, 1281, 1608, 1640, 1716 |
| BstF5I | GGATG | 8 cut(s) | 80, 168, 206, 379, 558, 1197, 1379, 1518 |
| BstKTI | GATC | 4 cut(s) | 647, 1099, 1227, 1682 |
| BstMAI | GTCTC | 2 cut(s) | 1064, 1244 |
| BstMBI | GATC | 4 cut(s) | 644, 1096, 1224, 1679 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 916, 1433 |
| BstNI | CCWGG | 3 cut(s) | 599, 1119, 1725 |
| BstNSI | RCATGY | 1 cut(s) | 914 |
| BstSCI | CCNGG | 4 cut(s) | 597, 1117, 1148, 1723 |
| BstSFI | CTRYAG | 3 cut(s) | 1179, 1493, 1800 |
| BstSLI | GKGCMC | 1 cut(s) | 882 |
| BstV1I | GCAGC | 5 cut(s) | 1294, 1304, 1439, 1616, 1750 |
| BstV2I | GAAGAC | 1 cut(s) | 1812 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 605 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1716 |
| BsuI | GTATCC | 3 cut(s) | 177, 587, 1408 |
| BsuRI | GGCC | 2 cut(s) | 1460, 1721 |
| BtsCI | GGATG | 8 cut(s) | 80, 168, 206, 379, 558, 1197, 1379, 1518 |
| BtsIMutI | CAGTG | 3 cut(s) | 664, 748, 966 |
| Cac8I | GCNNGC | 4 cut(s) | 33, 59, 1407, 1761 |
| CciI | TCATGA | 1 cut(s) | 96 |
| Cfr10I | RCCGGY | 1 cut(s) | 1484 |
| Cfr13I | GGNCC | 4 cut(s) | 143, 563, 1459, 1720 |
| CsiI | ACCWGGT | 1 cut(s) | 597 |
| Csp6I | GTAC | 4 cut(s) | 70, 788, 1259, 1733 |
| CspAI | ACCGGT | 1 cut(s) | 1484 |
| CviAII | CATG | 6 cut(s) | 97, 184, 310, 514, 911, 1141 |
| CviQI | GTAC | 4 cut(s) | 70, 788, 1259, 1733 |
| DdeI | CTNAG | 7 cut(s) | 426, 901, 1187, 1281, 1608, 1640, 1716 |
| DpnI | GATC | 4 cut(s) | 646, 1098, 1226, 1681 |
| DpnII | GATC | 4 cut(s) | 644, 1096, 1224, 1679 |
| Eam1104I | CTCTTC | 5 cut(s) | 252, 1242, 1464, 1823, 1839 |
| EarI | CTCTTC | 5 cut(s) | 252, 1242, 1464, 1823, 1839 |
| Eco130I | CCWWGG | 1 cut(s) | 624 |
| Eco47I | GGWCC | 2 cut(s) | 143, 563 |
| Eco57I | CTGAAG | 1 cut(s) | 246 |
| Eco81I | CCTNAGG | 1 cut(s) | 1716 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1459, 1720 |
| EcoRI | GAATTC | 1 cut(s) | 1669 |
| EcoRII | CCWGG | 3 cut(s) | 597, 1117, 1723 |
| EcoT14I | CCWWGG | 1 cut(s) | 624 |
| EcoT22I | ATGCAT | 1 cut(s) | 339 |
| ErhI | CCWWGG | 1 cut(s) | 624 |
| FaeI | CATG | 6 cut(s) | 100, 187, 313, 517, 914, 1144 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 24, 56, 120, 152, 333, 365, 927, 959 |
| FaqI | GGGAC | 1 cut(s) | 1646 |
| FatI | CATG | 6 cut(s) | 96, 183, 309, 513, 910, 1140 |
| FauNDI | CATATG | 2 cut(s) | 1133, 1432 |
| FbaI | TGATCA | 1 cut(s) | 1096 |
| FblI | GTMKAC | 1 cut(s) | 837 |
| Fnu4HI | GCNGC | 5 cut(s) | 1293, 1308, 1428, 1605, 1764 |
| FokI | GGATG | 8 cut(s) | 67, 175, 213, 386, 565, 1204, 1366, 1525 |
| Fsp4HI | GCNGC | 5 cut(s) | 1293, 1308, 1428, 1605, 1764 |
| FspBI | CTAG | 2 cut(s) | 717, 1173 |
| GluI | GCNGC | 5 cut(s) | 1293, 1308, 1428, 1605, 1764 |
| GsuI | CTGGAG | 1 cut(s) | 1140 |
| HaeIII | GGCC | 2 cut(s) | 1460, 1721 |
| HapII | CCGG | 2 cut(s) | 1150, 1485 |
| Hin1II | CATG | 6 cut(s) | 100, 187, 313, 517, 914, 1144 |
| HinfI | GANTC | 3 cut(s) | 100, 466, 1796 |
| HpaII | CCGG | 2 cut(s) | 1150, 1485 |
| HphI | GGTGA | 5 cut(s) | 217, 871, 1103, 1673, 1831 |
| Hpy166II | GTNNAC | 3 cut(s) | 838, 852, 1490 |
| Hpy188I | TCNGA | 3 cut(s) | 125, 1355, 1684 |
| Hpy188III | TCNNGA | 4 cut(s) | 97, 977, 1338, 1677 |
| Hpy8I | GTNNAC | 3 cut(s) | 838, 852, 1490 |
| HpyAV | CCTTC | 4 cut(s) | 221, 1189, 1417, 1652 |
| HpyCH4III | ACNGT | 5 cut(s) | 52, 112, 659, 1041, 1497 |
| HpyCH4IV | ACGT | 2 cut(s) | 283, 446 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 916, 1433 |
| HpyF3I | CTNAG | 7 cut(s) | 426, 901, 1187, 1281, 1608, 1640, 1716 |
| HpySE526I | ACGT | 2 cut(s) | 283, 446 |
| Hsp92II | CATG | 6 cut(s) | 100, 187, 313, 517, 914, 1144 |
| KpnI | GGTACC | 1 cut(s) | 791 |
| Ksp22I | TGATCA | 1 cut(s) | 1096 |
| Kzo9I | GATC | 4 cut(s) | 644, 1096, 1224, 1679 |
| LmnI | GCTCC | 3 cut(s) | 628, 1012, 1150 |
| Lsp1109I | GCAGC | 5 cut(s) | 1294, 1304, 1439, 1616, 1750 |
| MabI | ACCWGGT | 1 cut(s) | 597 |
| MaeI | CTAG | 2 cut(s) | 717, 1173 |
| MaeII | ACGT | 2 cut(s) | 283, 446 |
| MaeIII | GTNAC | 3 cut(s) | 632, 1497, 1516 |
| MalI | GATC | 4 cut(s) | 646, 1098, 1226, 1681 |
| MboI | GATC | 4 cut(s) | 644, 1096, 1224, 1679 |
| MboII | GAAGA | 9 cut(s) | 269, 466, 632, 1259, 1481, 1665, 1817, 1840, 1856 |
| MfeI | CAATTG | 1 cut(s) | 1593 |
| MhlI | GDGCHC | 1 cut(s) | 882 |
| MluCI | AATT | 6 cut(s) | 862, 1105, 1525, 1593, 1649, 1669 |
| MmeI | TCCRAC | 3 cut(s) | 541, 747, 1426 |
| Mph1103I | ATGCAT | 1 cut(s) | 339 |
| MroXI | GAANNNNTTC | 1 cut(s) | 191 |
| MslI | CAYNNNNRTG | 3 cut(s) | 188, 351, 885 |
| MspA1I | CMGCKG | 2 cut(s) | 1241, 1763 |
| MspCI | CTTAAG | 1 cut(s) | 1502 |
| MspI | CCGG | 2 cut(s) | 1150, 1485 |
| MspR9I | CCNGG | 4 cut(s) | 599, 1119, 1150, 1725 |
| MunI | CAATTG | 1 cut(s) | 1593 |
| MvaI | CCWGG | 3 cut(s) | 599, 1119, 1725 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 916, 1433 |
| NciI | CCSGG | 1 cut(s) | 1150 |
| NdeI | CATATG | 2 cut(s) | 1133, 1432 |
| NdeII | GATC | 4 cut(s) | 644, 1096, 1224, 1679 |
| NlaIII | CATG | 6 cut(s) | 100, 187, 313, 517, 914, 1144 |
| NlaIV | GGNNCC | 6 cut(s) | 221, 789, 1146, 1461, 1590, 1722 |
| NmuCI | GTSAC | 1 cut(s) | 632 |
| NsiI | ATGCAT | 1 cut(s) | 339 |
| NspI | RCATGY | 1 cut(s) | 914 |
| NspV | TTCGAA | 1 cut(s) | 479 |
| PagI | TCATGA | 1 cut(s) | 96 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 374 |
| PdmI | GAANNNNTTC | 1 cut(s) | 191 |
| PfeI | GAWTC | 3 cut(s) | 100, 466, 1796 |
| PinAI | ACCGGT | 1 cut(s) | 1484 |
| PkrI | GCNGC | 5 cut(s) | 1294, 1309, 1429, 1606, 1765 |
| Psp6I | CCWGG | 3 cut(s) | 597, 1117, 1723 |
| PspGI | CCWGG | 3 cut(s) | 597, 1117, 1723 |
| PspN4I | GGNNCC | 6 cut(s) | 221, 789, 1146, 1461, 1590, 1722 |
| PspPI | GGNCC | 4 cut(s) | 143, 563, 1459, 1720 |
| PvuII | CAGCTG | 2 cut(s) | 1241, 1763 |
| RsaI | GTAC | 4 cut(s) | 71, 789, 1260, 1734 |
| RsaNI | GTAC | 4 cut(s) | 70, 788, 1259, 1733 |
| RseI | CAYNNNNRTG | 3 cut(s) | 188, 351, 885 |
| SatI | GCNGC | 5 cut(s) | 1293, 1308, 1428, 1605, 1764 |
| Sau3AI | GATC | 4 cut(s) | 644, 1096, 1224, 1679 |
| Sau96I | GGNCC | 4 cut(s) | 143, 563, 1459, 1720 |
| ScaI | AGTACT | 1 cut(s) | 71 |
| ScrFI | CCNGG | 4 cut(s) | 599, 1119, 1150, 1725 |
| SduI | GDGCHC | 1 cut(s) | 882 |
| SexAI | ACCWGGT | 1 cut(s) | 597 |
| SfcI | CTRYAG | 3 cut(s) | 1179, 1493, 1800 |
| SfuI | TTCGAA | 1 cut(s) | 479 |
| SinI | GGWCC | 2 cut(s) | 143, 563 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 188, 351, 885 |
| SmlI | CTYRAG | 4 cut(s) | 1326, 1502, 1581, 1813 |
| SmoI | CTYRAG | 4 cut(s) | 1326, 1502, 1581, 1813 |
| Sse9I | AATT | 6 cut(s) | 862, 1105, 1525, 1593, 1649, 1669 |
| SspI | AATATT | 1 cut(s) | 924 |
| SspMI | CTAG | 2 cut(s) | 717, 1173 |
| StyD4I | CCNGG | 4 cut(s) | 597, 1117, 1148, 1723 |
| StyI | CCWWGG | 1 cut(s) | 624 |
| TaaI | ACNGT | 5 cut(s) | 52, 112, 659, 1041, 1497 |
| TaiI | ACGT | 2 cut(s) | 286, 449 |
| TaqI | TCGA | 5 cut(s) | 90, 157, 255, 479, 643 |
| TasI | AATT | 6 cut(s) | 862, 1105, 1525, 1593, 1649, 1669 |
| TatI | WGTACW | 1 cut(s) | 69 |
| TfiI | GAWTC | 3 cut(s) | 100, 466, 1796 |
| TscAI | CASTG | 3 cut(s) | 664, 748, 966 |
| TseFI | GTSAC | 1 cut(s) | 632 |
| TseI | GCWGC | 5 cut(s) | 1292, 1307, 1427, 1604, 1763 |
| Tsp45I | GTSAC | 1 cut(s) | 632 |
| TspGWI | ACGGA | 1 cut(s) | 383 |
| TspRI | CASTG | 3 cut(s) | 664, 748, 966 |
| Vha464I | CTTAAG | 1 cut(s) | 1502 |
| VpaK11BI | GGWCC | 2 cut(s) | 143, 563 |
| XapI | RAATTY | 2 cut(s) | 862, 1669 |
| XceI | RCATGY | 1 cut(s) | 914 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1138 |
| XmiI | GTMKAC | 1 cut(s) | 837 |
| XmnI | GAANNNNTTC | 1 cut(s) | 191 |
| XspI | CTAG | 2 cut(s) | 717, 1173 |
| ZrmI | AGTACT | 1 cut(s) | 71 |
| Zsp2I | ATGCAT | 1 cut(s) | 339 |