Mediator of RNA polymerase II transcription subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 579 |
| AciI | CCGC | 3 cut(s) | 219, 266, 363 |
| AclWI | GGATC | 2 cut(s) | 12, 425 |
| AcsI | RAATTY | 1 cut(s) | 408 |
| AluBI | AGCT | 4 cut(s) | 58, 85, 370, 383 |
| AluI | AGCT | 4 cut(s) | 58, 85, 370, 383 |
| Alw26I | GTCTC | 1 cut(s) | 518 |
| AlwI | GGATC | 2 cut(s) | 12, 425 |
| AoxI | GGCC | 2 cut(s) | 73, 90 |
| ApoI | RAATTY | 1 cut(s) | 408 |
| AsuHPI | GGTGA | 2 cut(s) | 200, 247 |
| BccI | CCATC | 2 cut(s) | 77, 260 |
| BceAI | ACGGC | 1 cut(s) | 26 |
| BcoDI | GTCTC | 1 cut(s) | 518 |
| BfaI | CTAG | 1 cut(s) | 513 |
| BmsI | GCATC | 2 cut(s) | 28, 270 |
| BpuEI | CTTGAG | 1 cut(s) | 107 |
| Bsa29I | ATCGAT | 2 cut(s) | 36, 312 |
| BsaJI | CCNNGG | 1 cut(s) | 413 |
| BseCI | ATCGAT | 2 cut(s) | 36, 312 |
| BseDI | CCNNGG | 1 cut(s) | 413 |
| BseGI | GGATG | 2 cut(s) | 261, 604 |
| BseMII | CTCAG | 3 cut(s) | 292, 341, 513 |
| BseYI | CCCAGC | 1 cut(s) | 197 |
| BsgI | GTGCAG | 1 cut(s) | 49 |
| BshFI | GGCC | 2 cut(s) | 75, 92 |
| BshVI | ATCGAT | 2 cut(s) | 36, 312 |
| BsmAI | GTCTC | 1 cut(s) | 518 |
| BsnI | GGCC | 2 cut(s) | 75, 92 |
| Bsp143I | GATC | 4 cut(s) | 4, 33, 417, 473 |
| BspACI | CCGC | 3 cut(s) | 219, 266, 363 |
| BspANI | GGCC | 2 cut(s) | 75, 92 |
| BspCNI | CTCAG | 3 cut(s) | 291, 340, 514 |
| BspDI | ATCGAT | 2 cut(s) | 36, 312 |
| BspPI | GGATC | 2 cut(s) | 12, 425 |
| BssECI | CCNNGG | 1 cut(s) | 413 |
| BssMI | GATC | 4 cut(s) | 4, 33, 417, 473 |
| BssT1I | CCWWGG | 1 cut(s) | 413 |
| Bst4CI | ACNGT | 2 cut(s) | 232, 529 |
| Bst6I | CTCTTC | 1 cut(s) | 114 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 274 |
| BstDEI | CTNAG | 3 cut(s) | 278, 327, 522 |
| BstF5I | GGATG | 2 cut(s) | 261, 604 |
| BstKTI | GATC | 4 cut(s) | 7, 36, 420, 476 |
| BstMAI | GTCTC | 1 cut(s) | 518 |
| BstMBI | GATC | 4 cut(s) | 4, 33, 417, 473 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 72, 274 |
| Bsu15I | ATCGAT | 2 cut(s) | 36, 312 |
| BsuRI | GGCC | 2 cut(s) | 75, 92 |
| BsuTUI | ATCGAT | 2 cut(s) | 36, 312 |
| BtsCI | GGATG | 2 cut(s) | 261, 604 |
| ClaI | ATCGAT | 2 cut(s) | 36, 312 |
| CviAII | CATG | 3 cut(s) | 185, 449, 541 |
| CviJI | RGCY | 7 cut(s) | 58, 75, 85, 92, 201, 370, 383 |
| CviKI_1 | RGCY | 7 cut(s) | 58, 75, 85, 92, 201, 370, 383 |
| DdeI | CTNAG | 3 cut(s) | 278, 327, 522 |
| DpnI | GATC | 4 cut(s) | 6, 35, 419, 475 |
| DpnII | GATC | 4 cut(s) | 4, 33, 417, 473 |
| Eam1104I | CTCTTC | 1 cut(s) | 114 |
| EarI | CTCTTC | 1 cut(s) | 114 |
| Eco130I | CCWWGG | 1 cut(s) | 413 |
| Eco147I | AGGCCT | 1 cut(s) | 92 |
| EcoRI | GAATTC | 1 cut(s) | 408 |
| EcoT14I | CCWWGG | 1 cut(s) | 413 |
| ErhI | CCWWGG | 1 cut(s) | 413 |
| FaeI | CATG | 3 cut(s) | 188, 452, 544 |
| FaiI | YATR | 9 cut(s) | 47, 186, 290, 317, 335, 380, 432, 450, 542 |
| FatI | CATG | 3 cut(s) | 184, 448, 540 |
| FauI | CCCGC | 3 cut(s) | 226, 273, 356 |
| FblI | GTMKAC | 1 cut(s) | 579 |
| FokI | GGATG | 1 cut(s) | 248 |
| FspBI | CTAG | 1 cut(s) | 513 |
| GsaI | CCCAGC | 1 cut(s) | 201 |
| HaeIII | GGCC | 2 cut(s) | 75, 92 |
| Hin1II | CATG | 3 cut(s) | 188, 452, 544 |
| HincII | GTYRAC | 1 cut(s) | 580 |
| HindII | GTYRAC | 1 cut(s) | 580 |
| HinfI | GANTC | 3 cut(s) | 325, 467, 509 |
| HphI | GGTGA | 2 cut(s) | 200, 247 |
| Hpy166II | GTNNAC | 1 cut(s) | 580 |
| Hpy188I | TCNGA | 2 cut(s) | 478, 523 |
| Hpy188III | TCNNGA | 2 cut(s) | 31, 471 |
| Hpy8I | GTNNAC | 1 cut(s) | 580 |
| HpyAV | CCTTC | 1 cut(s) | 581 |
| HpyCH4III | ACNGT | 2 cut(s) | 232, 529 |
| HpyCH4V | TGCA | 1 cut(s) | 66 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 72, 274 |
| HpyF3I | CTNAG | 3 cut(s) | 278, 327, 522 |
| Hsp92II | CATG | 3 cut(s) | 188, 452, 544 |
| Kzo9I | GATC | 4 cut(s) | 4, 33, 417, 473 |
| LpnPI | CCDG | 4 cut(s) | 211, 271, 411, 518 |
| LweI | GCATC | 2 cut(s) | 28, 270 |
| MaeI | CTAG | 1 cut(s) | 513 |
| MaeIII | GTNAC | 1 cut(s) | 536 |
| MalI | GATC | 4 cut(s) | 6, 35, 419, 475 |
| MboI | GATC | 4 cut(s) | 4, 33, 417, 473 |
| MboII | GAAGA | 6 cut(s) | 131, 137, 149, 155, 186, 354 |
| MluCI | AATT | 2 cut(s) | 408, 563 |
| MlyI | GAGTC | 3 cut(s) | 319, 476, 518 |
| MnlI | CCTC | 8 cut(s) | 34, 82, 86, 109, 115, 282, 448, 589 |
| MseI | TTAA | 1 cut(s) | 96 |
| MslI | CAYNNNNRTG | 1 cut(s) | 314 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 72, 274 |
| NdeII | GATC | 4 cut(s) | 4, 33, 417, 473 |
| NlaIII | CATG | 3 cut(s) | 188, 452, 544 |
| PceI | AGGCCT | 1 cut(s) | 92 |
| PleI | GAGTC | 3 cut(s) | 319, 475, 517 |
| PpsI | GAGTC | 3 cut(s) | 319, 475, 517 |
| PspFI | CCCAGC | 1 cut(s) | 197 |
| RseI | CAYNNNNRTG | 1 cut(s) | 314 |
| SalI | GTCGAC | 1 cut(s) | 578 |
| SaqAI | TTAA | 1 cut(s) | 96 |
| Sau3AI | GATC | 4 cut(s) | 4, 33, 417, 473 |
| SchI | GAGTC | 3 cut(s) | 319, 476, 518 |
| SetI | ASST | 7 cut(s) | 26, 60, 87, 274, 372, 385, 459 |
| SfaNI | GCATC | 2 cut(s) | 28, 270 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 314 |
| SmlI | CTYRAG | 1 cut(s) | 86 |
| SmoI | CTYRAG | 1 cut(s) | 86 |
| Sse9I | AATT | 2 cut(s) | 408, 563 |
| SseBI | AGGCCT | 1 cut(s) | 92 |
| SsiI | CCGC | 3 cut(s) | 219, 266, 363 |
| SspMI | CTAG | 1 cut(s) | 513 |
| StuI | AGGCCT | 1 cut(s) | 92 |
| StyI | CCWWGG | 1 cut(s) | 413 |
| TaaI | ACNGT | 2 cut(s) | 232, 529 |
| TaqI | TCGA | 7 cut(s) | 36, 78, 284, 312, 323, 420, 579 |
| TasI | AATT | 2 cut(s) | 408, 563 |
| Tru1I | TTAA | 1 cut(s) | 96 |
| Tru9I | TTAA | 1 cut(s) | 96 |
| TspDTI | ATGAA | 4 cut(s) | 156, 173, 322, 516 |
| XapI | RAATTY | 1 cut(s) | 408 |
| XmiI | GTMKAC | 1 cut(s) | 579 |
| XspI | CTAG | 1 cut(s) | 513 |