source UniProtKB
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 941 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 932 |
| AccI | GTMKAC | 1 cut(s) | 160 |
| AccII | CGCG | 1 cut(s) | 634 |
| AciI | CCGC | 2 cut(s) | 100, 1172 |
| AclWI | GGATC | 2 cut(s) | 581, 1079 |
| AcoI | YGGCCR | 1 cut(s) | 761 |
| AcsI | RAATTY | 4 cut(s) | 42, 971, 1414, 1426 |
| AcuI | CTGAAG | 4 cut(s) | 381, 411, 1440, 1497 |
| AcyI | GRCGYC | 1 cut(s) | 792 |
| AdeI | CACNNNGTG | 1 cut(s) | 879 |
| AfaI | GTAC | 6 cut(s) | 36, 285, 302, 412, 727, 1161 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 932, 1060, 1178, 1514 |
| AflII | CTTAAG | 1 cut(s) | 617 |
| AflIII | ACRYGT | 1 cut(s) | 1140 |
| AgsI | TTSAA | 6 cut(s) | 10, 311, 449, 641, 866, 1031 |
| AjiI | CACGTC | 1 cut(s) | 1143 |
| AluBI | AGCT | 9 cut(s) | 654, 755, 1240, 1361, 1373, 1385, 1454, 1475, 1487 |
| AluI | AGCT | 9 cut(s) | 654, 755, 1240, 1361, 1373, 1385, 1454, 1475, 1487 |
| Alw21I | GWGCWC | 2 cut(s) | 842, 1171 |
| Alw26I | GTCTC | 2 cut(s) | 176, 661 |
| AlwI | GGATC | 2 cut(s) | 581, 1079 |
| AoxI | GGCC | 1 cut(s) | 761 |
| ApeKI | GCWGC | 3 cut(s) | 1066, 1361, 1370 |
| ApoI | RAATTY | 4 cut(s) | 42, 971, 1414, 1426 |
| AseI | ATTAAT | 1 cut(s) | 801 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 654 |
| AspS9I | GGNCC | 3 cut(s) | 80, 278, 325 |
| AsuHPI | GGTGA | 1 cut(s) | 230 |
| AsuNHI | GCTAGC | 1 cut(s) | 751 |
| AvaII | GGWCC | 3 cut(s) | 80, 278, 325 |
| Bbv12I | GWGCWC | 2 cut(s) | 842, 1171 |
| BbvI | GCAGC | 3 cut(s) | 1053, 1348, 1382 |
| BccI | CCATC | 4 cut(s) | 126, 684, 1028, 1447 |
| BcoDI | GTCTC | 2 cut(s) | 176, 661 |
| BfaI | CTAG | 8 cut(s) | 197, 659, 752, 959, 1176, 1247, 1386, 1512 |
| BfmI | CTRYAG | 2 cut(s) | 576, 1488 |
| BfrI | CTTAAG | 1 cut(s) | 617 |
| BglII | AGATCT | 1 cut(s) | 1317 |
| BisI | GCNGC | 3 cut(s) | 1067, 1362, 1371 |
| BlsI | GCNGC | 3 cut(s) | 1068, 1363, 1372 |
| BmcAI | AGTACT | 1 cut(s) | 727 |
| Bme18I | GGWCC | 3 cut(s) | 80, 278, 325 |
| BmgBI | CACGTC | 1 cut(s) | 1143 |
| BmgT120I | GGNCC | 3 cut(s) | 80, 278, 325 |
| BmiI | GGNNCC | 2 cut(s) | 809, 981 |
| BmsI | GCATC | 4 cut(s) | 440, 1078, 1109, 1447 |
| BmtI | GCTAGC | 1 cut(s) | 755 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1019 |
| BpmI | CTGGAG | 1 cut(s) | 1332 |
| Bsa29I | ATCGAT | 2 cut(s) | 349, 556 |
| BsaHI | GRCGYC | 1 cut(s) | 792 |
| BsaJI | CCNNGG | 2 cut(s) | 83, 590 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 932, 1060, 1178, 1514 |
| Bse1I | ACTGG | 3 cut(s) | 418, 1021, 1223 |
| Bse3DI | GCAATG | 1 cut(s) | 466 |
| BseCI | ATCGAT | 2 cut(s) | 349, 556 |
| BseDI | CCNNGG | 2 cut(s) | 83, 590 |
| BseGI | GGATG | 2 cut(s) | 303, 695 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 932, 1060, 1178, 1514 |
| BseMI | GCAATG | 1 cut(s) | 466 |
| BseMII | CTCAG | 1 cut(s) | 822 |
| BseNI | ACTGG | 3 cut(s) | 418, 1021, 1223 |
| BseX3I | CGGCCG | 1 cut(s) | 761 |
| BseXI | GCAGC | 3 cut(s) | 1053, 1348, 1382 |
| BsgI | GTGCAG | 1 cut(s) | 1347 |
| Bsh1236I | CGCG | 1 cut(s) | 634 |
| Bsh1285I | CGRYCG | 1 cut(s) | 764 |
| BshFI | GGCC | 1 cut(s) | 763 |
| BshVI | ATCGAT | 2 cut(s) | 349, 556 |
| BsiEI | CGRYCG | 1 cut(s) | 764 |
| BsiHKAI | GWGCWC | 2 cut(s) | 842, 1171 |
| BslFI | GGGAC | 2 cut(s) | 766, 1027 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 932, 1060, 1178, 1514 |
| BsmAI | GTCTC | 2 cut(s) | 176, 661 |
| BsmFI | GGGAC | 2 cut(s) | 766, 1027 |
| BsnI | GGCC | 1 cut(s) | 763 |
| Bsp1286I | GDGCHC | 2 cut(s) | 842, 1171 |
| Bsp1407I | TGTACA | 1 cut(s) | 283 |
| Bsp143I | GATC | 4 cut(s) | 350, 586, 1084, 1317 |
| Bsp19I | CCATGG | 1 cut(s) | 590 |
| BspACI | CCGC | 2 cut(s) | 100, 1172 |
| BspANI | GGCC | 1 cut(s) | 763 |
| BspCNI | CTCAG | 1 cut(s) | 823 |
| BspDI | ATCGAT | 2 cut(s) | 349, 556 |
| BspFNI | CGCG | 1 cut(s) | 634 |
| BspLI | GGNNCC | 2 cut(s) | 809, 981 |
| BspOI | GCTAGC | 1 cut(s) | 755 |
| BspPI | GGATC | 2 cut(s) | 581, 1079 |
| BspQI | GCTCTTC | 1 cut(s) | 830 |
| BspTI | CTTAAG | 1 cut(s) | 617 |
| BsrDI | GCAATG | 1 cut(s) | 466 |
| BsrGI | TGTACA | 1 cut(s) | 283 |
| BsrI | ACTGG | 3 cut(s) | 418, 1021, 1223 |
| BssECI | CCNNGG | 2 cut(s) | 83, 590 |
| BssMI | GATC | 4 cut(s) | 350, 586, 1084, 1317 |
| BssNI | GRCGYC | 1 cut(s) | 792 |
| BssT1I | CCWWGG | 2 cut(s) | 83, 590 |
| Bst4CI | ACNGT | 2 cut(s) | 851, 987 |
| Bst6I | CTCTTC | 2 cut(s) | 387, 830 |
| BstACI | GRCGYC | 1 cut(s) | 792 |
| BstAFI | CTTAAG | 1 cut(s) | 617 |
| BstAUI | TGTACA | 1 cut(s) | 283 |
| BstC8I | GCNNGC | 3 cut(s) | 194, 753, 1452 |
| BstDEI | CTNAG | 2 cut(s) | 831, 1163 |
| BstDSI | CCRYGG | 1 cut(s) | 590 |
| BstF5I | GGATG | 2 cut(s) | 303, 695 |
| BstFNI | CGCG | 1 cut(s) | 634 |
| BstKTI | GATC | 4 cut(s) | 353, 589, 1087, 1320 |
| BstMAI | GTCTC | 2 cut(s) | 176, 661 |
| BstMBI | GATC | 4 cut(s) | 350, 586, 1084, 1317 |
| BstMCI | CGRYCG | 1 cut(s) | 764 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 263, 1106, 1340, 1367, 1370, 1396 |
| BstNSI | RCATGY | 3 cut(s) | 196, 1157, 1370 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1019 |
| BstSFI | CTRYAG | 2 cut(s) | 576, 1488 |
| BstUI | CGCG | 1 cut(s) | 634 |
| BstV1I | GCAGC | 3 cut(s) | 1053, 1348, 1382 |
| BstX2I | RGATCY | 3 cut(s) | 586, 1084, 1317 |
| BstYI | RGATCY | 3 cut(s) | 586, 1084, 1317 |
| BstZI | CGGCCG | 1 cut(s) | 761 |
| Bsu15I | ATCGAT | 2 cut(s) | 349, 556 |
| BsuRI | GGCC | 1 cut(s) | 763 |
| BsuTUI | ATCGAT | 2 cut(s) | 349, 556 |
| BtgI | CCRYGG | 1 cut(s) | 590 |
| BtrI | CACGTC | 1 cut(s) | 1143 |
| BtsCI | GGATG | 2 cut(s) | 303, 695 |
| BtsIMutI | CAGTG | 2 cut(s) | 856, 983 |
| Cac8I | GCNNGC | 3 cut(s) | 194, 753, 1452 |
| Cfr13I | GGNCC | 3 cut(s) | 80, 278, 325 |
| ClaI | ATCGAT | 2 cut(s) | 349, 556 |
| CseI | GACGC | 2 cut(s) | 623, 781 |
| Csp6I | GTAC | 6 cut(s) | 35, 284, 301, 411, 726, 1160 |
| CviAII | CATG | 6 cut(s) | 26, 193, 591, 1154, 1367, 1408 |
| CviQI | GTAC | 6 cut(s) | 35, 284, 301, 411, 726, 1160 |
| DdeI | CTNAG | 2 cut(s) | 831, 1163 |
| DpnI | GATC | 4 cut(s) | 352, 588, 1086, 1319 |
| DpnII | GATC | 4 cut(s) | 350, 586, 1084, 1317 |
| DraI | TTTAAA | 1 cut(s) | 60 |
| DraIII | CACNNNGTG | 1 cut(s) | 879 |
| EaeI | YGGCCR | 1 cut(s) | 761 |
| EagI | CGGCCG | 1 cut(s) | 761 |
| Eam1104I | CTCTTC | 2 cut(s) | 387, 830 |
| EarI | CTCTTC | 2 cut(s) | 387, 830 |
| EclXI | CGGCCG | 1 cut(s) | 761 |
| Eco130I | CCWWGG | 2 cut(s) | 83, 590 |
| Eco47I | GGWCC | 3 cut(s) | 80, 278, 325 |
| Eco52I | CGGCCG | 1 cut(s) | 761 |
| Eco57I | CTGAAG | 4 cut(s) | 381, 411, 1440, 1497 |
| EcoO109I | RGGNCCY | 1 cut(s) | 325 |
| EcoT14I | CCWWGG | 2 cut(s) | 83, 590 |
| EcoT22I | ATGCAT | 1 cut(s) | 194 |
| ErhI | CCWWGG | 2 cut(s) | 83, 590 |
| FaeI | CATG | 6 cut(s) | 29, 196, 594, 1157, 1370, 1411 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 54, 86, 252, 284 |
| FaqI | GGGAC | 2 cut(s) | 766, 1027 |
| FatI | CATG | 6 cut(s) | 25, 192, 590, 1153, 1366, 1407 |
| FauNDI | CATATG | 2 cut(s) | 672, 1446 |
| FblI | GTMKAC | 1 cut(s) | 160 |
| Fnu4HI | GCNGC | 3 cut(s) | 1067, 1362, 1371 |
| FokI | GGATG | 2 cut(s) | 310, 702 |
| Fsp4HI | GCNGC | 3 cut(s) | 1067, 1362, 1371 |
| FspBI | CTAG | 8 cut(s) | 197, 659, 752, 959, 1176, 1247, 1386, 1512 |
| GluI | GCNGC | 3 cut(s) | 1067, 1362, 1371 |
| GsuI | CTGGAG | 1 cut(s) | 1332 |
| HaeIII | GGCC | 1 cut(s) | 763 |
| HgaI | GACGC | 2 cut(s) | 623, 781 |
| Hin1I | GRCGYC | 1 cut(s) | 792 |
| Hin1II | CATG | 6 cut(s) | 29, 196, 594, 1157, 1370, 1411 |
| HincII | GTYRAC | 1 cut(s) | 1051 |
| HindII | GTYRAC | 1 cut(s) | 1051 |
| HindIII | AAGCTT | 1 cut(s) | 652 |
| HinfI | GANTC | 6 cut(s) | 184, 204, 247, 346, 629, 1196 |
| HpaI | GTTAAC | 1 cut(s) | 1051 |
| HphI | GGTGA | 1 cut(s) | 230 |
| Hpy166II | GTNNAC | 4 cut(s) | 161, 238, 567, 1051 |
| Hpy188I | TCNGA | 5 cut(s) | 436, 736, 915, 969, 1420 |
| Hpy188III | TCNNGA | 7 cut(s) | 343, 359, 470, 638, 659, 1128, 1311 |
| Hpy8I | GTNNAC | 4 cut(s) | 161, 238, 567, 1051 |
| HpyAV | CCTTC | 6 cut(s) | 316, 356, 485, 1317, 1415, 1472 |
| HpyCH4III | ACNGT | 2 cut(s) | 851, 987 |
| HpyCH4IV | ACGT | 1 cut(s) | 1142 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 263, 1106, 1340, 1367, 1370, 1396 |
| HpyF3I | CTNAG | 2 cut(s) | 831, 1163 |
| HpySE526I | ACGT | 1 cut(s) | 1142 |
| Hsp92I | GRCGYC | 1 cut(s) | 792 |
| Hsp92II | CATG | 6 cut(s) | 29, 196, 594, 1157, 1370, 1411 |
| KspAI | GTTAAC | 1 cut(s) | 1051 |
| Kzo9I | GATC | 4 cut(s) | 350, 586, 1084, 1317 |
| LguI | GCTCTTC | 1 cut(s) | 830 |
| Lsp1109I | GCAGC | 3 cut(s) | 1053, 1348, 1382 |
| LweI | GCATC | 4 cut(s) | 440, 1078, 1109, 1447 |
| MaeI | CTAG | 8 cut(s) | 197, 659, 752, 959, 1176, 1247, 1386, 1512 |
| MaeII | ACGT | 1 cut(s) | 1142 |
| MaeIII | GTNAC | 2 cut(s) | 12, 1136 |
| MalI | GATC | 4 cut(s) | 352, 588, 1086, 1319 |
| MboI | GATC | 4 cut(s) | 350, 586, 1084, 1317 |
| MboII | GAAGA | 8 cut(s) | 62, 404, 525, 623, 653, 847, 1043, 1274 |
| MflI | RGATCY | 3 cut(s) | 586, 1084, 1317 |
| MhlI | GDGCHC | 2 cut(s) | 842, 1171 |
| MlyI | GAGTC | 1 cut(s) | 178 |
| MnlI | CCTC | 8 cut(s) | 222, 256, 457, 1064, 1172, 1201, 1279, 1508 |
| Mph1103I | ATGCAT | 1 cut(s) | 194 |
| MroXI | GAANNNNTTC | 1 cut(s) | 654 |
| MseI | TTAA | 8 cut(s) | 59, 423, 527, 618, 708, 801, 975, 1050 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1248 |
| MspA1I | CMGCKG | 3 cut(s) | 1373, 1454, 1475 |
| MspCI | CTTAAG | 1 cut(s) | 617 |
| MvnI | CGCG | 1 cut(s) | 634 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 263, 1106, 1340, 1367, 1370, 1396 |
| NcoI | CCATGG | 1 cut(s) | 590 |
| NdeI | CATATG | 2 cut(s) | 672, 1446 |
| NdeII | GATC | 4 cut(s) | 350, 586, 1084, 1317 |
| NheI | GCTAGC | 1 cut(s) | 751 |
| NlaIII | CATG | 6 cut(s) | 29, 196, 594, 1157, 1370, 1411 |
| NlaIV | GGNNCC | 2 cut(s) | 809, 981 |
| NmuCI | GTSAC | 2 cut(s) | 12, 1136 |
| NsiI | ATGCAT | 1 cut(s) | 194 |
| NspI | RCATGY | 3 cut(s) | 196, 1157, 1370 |
| PaeI | GCATGC | 1 cut(s) | 196 |
| PciSI | GCTCTTC | 1 cut(s) | 830 |
| PdmI | GAANNNNTTC | 1 cut(s) | 654 |
| PfeI | GAWTC | 5 cut(s) | 204, 247, 346, 629, 1196 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 932 |
| PkrI | GCNGC | 3 cut(s) | 1068, 1363, 1372 |
| PleI | GAGTC | 1 cut(s) | 178 |
| PpsI | GAGTC | 1 cut(s) | 178 |
| PpuMI | RGGWCCY | 1 cut(s) | 325 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1019 |
| PshBI | ATTAAT | 1 cut(s) | 801 |
| PsiI | TTATAA | 1 cut(s) | 941 |
| Psp5II | RGGWCCY | 1 cut(s) | 325 |
| PspN4I | GGNNCC | 2 cut(s) | 809, 981 |
| PspPI | GGNCC | 3 cut(s) | 80, 278, 325 |
| PspPPI | RGGWCCY | 1 cut(s) | 325 |
| PsuI | RGATCY | 3 cut(s) | 586, 1084, 1317 |
| PvuII | CAGCTG | 3 cut(s) | 1373, 1454, 1475 |
| RsaI | GTAC | 6 cut(s) | 36, 285, 302, 412, 727, 1161 |
| RsaNI | GTAC | 6 cut(s) | 35, 284, 301, 411, 726, 1160 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1248 |
| SapI | GCTCTTC | 1 cut(s) | 830 |
| SaqAI | TTAA | 8 cut(s) | 59, 423, 527, 618, 708, 801, 975, 1050 |
| SatI | GCNGC | 3 cut(s) | 1067, 1362, 1371 |
| Sau3AI | GATC | 4 cut(s) | 350, 586, 1084, 1317 |
| Sau96I | GGNCC | 3 cut(s) | 80, 278, 325 |
| ScaI | AGTACT | 1 cut(s) | 727 |
| SchI | GAGTC | 1 cut(s) | 178 |
| SduI | GDGCHC | 2 cut(s) | 842, 1171 |
| SfaNI | GCATC | 4 cut(s) | 440, 1078, 1109, 1447 |
| SfcI | CTRYAG | 2 cut(s) | 576, 1488 |
| SinI | GGWCC | 3 cut(s) | 80, 278, 325 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1248 |
| SmlI | CTYRAG | 1 cut(s) | 617 |
| SmoI | CTYRAG | 1 cut(s) | 617 |
| SphI | GCATGC | 1 cut(s) | 196 |
| SsiI | CCGC | 2 cut(s) | 100, 1172 |
| SspI | AATATT | 1 cut(s) | 486 |
| SspMI | CTAG | 8 cut(s) | 197, 659, 752, 959, 1176, 1247, 1386, 1512 |
| StyI | CCWWGG | 2 cut(s) | 83, 590 |
| TaaI | ACNGT | 2 cut(s) | 851, 987 |
| TaiI | ACGT | 1 cut(s) | 1145 |
| TaqI | TCGA | 5 cut(s) | 349, 556, 883, 1127, 1298 |
| TatI | WGTACW | 5 cut(s) | 34, 283, 410, 725, 1159 |
| TfiI | GAWTC | 5 cut(s) | 204, 247, 346, 629, 1196 |
| Tru1I | TTAA | 8 cut(s) | 59, 423, 527, 618, 708, 801, 975, 1050 |
| Tru9I | TTAA | 8 cut(s) | 59, 423, 527, 618, 708, 801, 975, 1050 |
| TscAI | CASTG | 2 cut(s) | 856, 990 |
| TseFI | GTSAC | 2 cut(s) | 12, 1136 |
| TseI | GCWGC | 3 cut(s) | 1066, 1361, 1370 |
| Tsp45I | GTSAC | 2 cut(s) | 12, 1136 |
| TspDTI | ATGAA | 6 cut(s) | 239, 335, 492, 663, 806, 1275 |
| TspGWI | ACGGA | 2 cut(s) | 204, 850 |
| TspRI | CASTG | 2 cut(s) | 856, 990 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 932 |
| Vha464I | CTTAAG | 1 cut(s) | 617 |
| VpaK11BI | GGWCC | 3 cut(s) | 80, 278, 325 |
| VspI | ATTAAT | 1 cut(s) | 801 |
| XapI | RAATTY | 4 cut(s) | 42, 971, 1414, 1426 |
| XbaI | TCTAGA | 1 cut(s) | 658 |
| XceI | RCATGY | 3 cut(s) | 196, 1157, 1370 |
| XmiI | GTMKAC | 1 cut(s) | 160 |
| XmnI | GAANNNNTTC | 1 cut(s) | 654 |
| XspI | CTAG | 8 cut(s) | 197, 659, 752, 959, 1176, 1247, 1386, 1512 |
| ZrmI | AGTACT | 1 cut(s) | 727 |
| Zsp2I | ATGCAT | 1 cut(s) | 194 |