Transposase-associated domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 261, 278, 459 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 528 |
| AccI | GTMKAC | 1 cut(s) | 550 |
| AccII | CGCG | 1 cut(s) | 526 |
| AciI | CCGC | 2 cut(s) | 173, 524 |
| AcoI | YGGCCR | 2 cut(s) | 107, 384 |
| AcsI | RAATTY | 1 cut(s) | 493 |
| AcuI | CTGAAG | 2 cut(s) | 252, 336 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 58 |
| AgsI | TTSAA | 1 cut(s) | 86 |
| AjnI | CCWGG | 3 cut(s) | 109, 517, 532 |
| Alw21I | GWGCWC | 1 cut(s) | 371 |
| Alw26I | GTCTC | 1 cut(s) | 510 |
| AoxI | GGCC | 4 cut(s) | 35, 107, 384, 437 |
| ApoI | RAATTY | 1 cut(s) | 493 |
| AspS9I | GGNCC | 2 cut(s) | 35, 521 |
| AsuHPI | GGTGA | 1 cut(s) | 187 |
| AvaII | GGWCC | 1 cut(s) | 521 |
| BalI | TGGCCA | 2 cut(s) | 109, 386 |
| Bbv12I | GWGCWC | 1 cut(s) | 371 |
| BccI | CCATC | 2 cut(s) | 46, 386 |
| BciT130I | CCWGG | 3 cut(s) | 111, 519, 534 |
| BclI | TGATCA | 1 cut(s) | 424 |
| BcoDI | GTCTC | 1 cut(s) | 510 |
| BglII | AGATCT | 1 cut(s) | 189 |
| Bme1390I | CCNGG | 3 cut(s) | 111, 519, 534 |
| Bme18I | GGWCC | 1 cut(s) | 521 |
| BmgT120I | GGNCC | 2 cut(s) | 35, 521 |
| BmrFI | CCNGG | 3 cut(s) | 111, 519, 534 |
| BmsI | GCATC | 1 cut(s) | 301 |
| BpmI | CTGGAG | 1 cut(s) | 227 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 58 |
| Bse1I | ACTGG | 2 cut(s) | 210, 387 |
| BseBI | CCWGG | 3 cut(s) | 111, 519, 534 |
| BseGI | GGATG | 1 cut(s) | 480 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 58 |
| BseNI | ACTGG | 2 cut(s) | 210, 387 |
| Bsh1236I | CGCG | 1 cut(s) | 526 |
| BshFI | GGCC | 4 cut(s) | 37, 109, 386, 439 |
| BsiHKAI | GWGCWC | 1 cut(s) | 371 |
| BslFI | GGGAC | 1 cut(s) | 303 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 58 |
| BsmAI | GTCTC | 1 cut(s) | 510 |
| BsmFI | GGGAC | 1 cut(s) | 303 |
| BsmI | GAATGC | 1 cut(s) | 183 |
| BsnI | GGCC | 4 cut(s) | 37, 109, 386, 439 |
| Bsp1286I | GDGCHC | 1 cut(s) | 371 |
| Bsp143I | GATC | 5 cut(s) | 94, 159, 189, 333, 424 |
| BspACI | CCGC | 2 cut(s) | 173, 524 |
| BspANI | GGCC | 4 cut(s) | 37, 109, 386, 439 |
| BspFNI | CGCG | 1 cut(s) | 526 |
| BsrI | ACTGG | 2 cut(s) | 210, 387 |
| BssMI | GATC | 5 cut(s) | 94, 159, 189, 333, 424 |
| BssNAI | GTATAC | 1 cut(s) | 551 |
| Bst1107I | GTATAC | 1 cut(s) | 551 |
| Bst2UI | CCWGG | 3 cut(s) | 111, 519, 534 |
| Bst4CI | ACNGT | 2 cut(s) | 153, 364 |
| Bst6I | CTCTTC | 1 cut(s) | 81 |
| BstC8I | GCNNGC | 1 cut(s) | 7 |
| BstF5I | GGATG | 1 cut(s) | 480 |
| BstFNI | CGCG | 1 cut(s) | 526 |
| BstKTI | GATC | 5 cut(s) | 97, 162, 192, 336, 427 |
| BstMAI | GTCTC | 1 cut(s) | 510 |
| BstMBI | GATC | 5 cut(s) | 94, 159, 189, 333, 424 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 445 |
| BstNI | CCWGG | 3 cut(s) | 111, 519, 534 |
| BstNSI | RCATGY | 2 cut(s) | 318, 557 |
| BstSCI | CCNGG | 3 cut(s) | 109, 517, 532 |
| BstUI | CGCG | 1 cut(s) | 526 |
| BstX2I | RGATCY | 1 cut(s) | 189 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 205 |
| BstYI | RGATCY | 1 cut(s) | 189 |
| BstZ17I | GTATAC | 1 cut(s) | 551 |
| BsuRI | GGCC | 4 cut(s) | 37, 109, 386, 439 |
| BtsCI | GGATG | 1 cut(s) | 480 |
| BtsIMutI | CAGTG | 1 cut(s) | 394 |
| Cac8I | GCNNGC | 1 cut(s) | 7 |
| Cfr13I | GGNCC | 2 cut(s) | 35, 521 |
| CseI | GACGC | 1 cut(s) | 546 |
| CviAII | CATG | 5 cut(s) | 315, 331, 435, 481, 554 |
| CviJI | RGCY | 4 cut(s) | 37, 109, 386, 439 |
| CviKI_1 | RGCY | 4 cut(s) | 37, 109, 386, 439 |
| DpnI | GATC | 5 cut(s) | 96, 161, 191, 335, 426 |
| DpnII | GATC | 5 cut(s) | 94, 159, 189, 333, 424 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 528 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 528 |
| EaeI | YGGCCR | 2 cut(s) | 107, 384 |
| Eam1104I | CTCTTC | 1 cut(s) | 81 |
| EarI | CTCTTC | 1 cut(s) | 81 |
| Eco47I | GGWCC | 1 cut(s) | 521 |
| Eco57I | CTGAAG | 2 cut(s) | 252, 336 |
| EcoRII | CCWGG | 3 cut(s) | 109, 517, 532 |
| EcoT22I | ATGCAT | 1 cut(s) | 316 |
| FaeI | CATG | 5 cut(s) | 318, 334, 438, 484, 557 |
| FaqI | GGGAC | 1 cut(s) | 303 |
| FatI | CATG | 5 cut(s) | 314, 330, 434, 480, 553 |
| FauI | CCCGC | 1 cut(s) | 166 |
| FbaI | TGATCA | 1 cut(s) | 424 |
| FblI | GTMKAC | 1 cut(s) | 550 |
| FokI | GGATG | 1 cut(s) | 487 |
| GsuI | CTGGAG | 1 cut(s) | 227 |
| HaeIII | GGCC | 4 cut(s) | 37, 109, 386, 439 |
| HgaI | GACGC | 1 cut(s) | 546 |
| Hin1II | CATG | 5 cut(s) | 318, 334, 438, 484, 557 |
| HinfI | GANTC | 1 cut(s) | 251 |
| HphI | GGTGA | 1 cut(s) | 187 |
| Hpy166II | GTNNAC | 1 cut(s) | 551 |
| Hpy188I | TCNGA | 2 cut(s) | 159, 355 |
| Hpy188III | TCNNGA | 1 cut(s) | 98 |
| Hpy8I | GTNNAC | 1 cut(s) | 551 |
| HpyAV | CCTTC | 1 cut(s) | 227 |
| HpyCH4III | ACNGT | 2 cut(s) | 153, 364 |
| HpyCH4V | TGCA | 4 cut(s) | 64, 314, 330, 480 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 445 |
| Hsp92II | CATG | 5 cut(s) | 318, 334, 438, 484, 557 |
| Ksp22I | TGATCA | 1 cut(s) | 424 |
| Kzo9I | GATC | 5 cut(s) | 94, 159, 189, 333, 424 |
| LweI | GCATC | 1 cut(s) | 301 |
| MalI | GATC | 5 cut(s) | 96, 161, 191, 335, 426 |
| MboI | GATC | 5 cut(s) | 94, 159, 189, 333, 424 |
| MboII | GAAGA | 2 cut(s) | 98, 184 |
| MfeI | CAATTG | 1 cut(s) | 141 |
| MflI | RGATCY | 1 cut(s) | 189 |
| MhlI | GDGCHC | 1 cut(s) | 371 |
| MlsI | TGGCCA | 2 cut(s) | 109, 386 |
| MluCI | AATT | 6 cut(s) | 131, 141, 213, 306, 460, 493 |
| MluNI | TGGCCA | 2 cut(s) | 109, 386 |
| MnlI | CCTC | 3 cut(s) | 52, 82, 411 |
| Mox20I | TGGCCA | 2 cut(s) | 109, 386 |
| Mph1103I | ATGCAT | 1 cut(s) | 316 |
| MscI | TGGCCA | 2 cut(s) | 109, 386 |
| MseI | TTAA | 6 cut(s) | 75, 126, 212, 216, 399, 512 |
| Msp20I | TGGCCA | 2 cut(s) | 109, 386 |
| MspR9I | CCNGG | 3 cut(s) | 111, 519, 534 |
| MunI | CAATTG | 1 cut(s) | 141 |
| Mva1269I | GAATGC | 1 cut(s) | 183 |
| MvaI | CCWGG | 3 cut(s) | 111, 519, 534 |
| MvnI | CGCG | 1 cut(s) | 526 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 445 |
| NdeII | GATC | 5 cut(s) | 94, 159, 189, 333, 424 |
| NlaIII | CATG | 5 cut(s) | 318, 334, 438, 484, 557 |
| NsiI | ATGCAT | 1 cut(s) | 316 |
| NspI | RCATGY | 2 cut(s) | 318, 557 |
| PacI | TTAATTAA | 1 cut(s) | 216 |
| PctI | GAATGC | 1 cut(s) | 183 |
| PfeI | GAWTC | 1 cut(s) | 251 |
| PsiI | TTATAA | 3 cut(s) | 261, 278, 459 |
| Psp6I | CCWGG | 3 cut(s) | 109, 517, 532 |
| PspGI | CCWGG | 3 cut(s) | 109, 517, 532 |
| PspPI | GGNCC | 2 cut(s) | 35, 521 |
| PsuI | RGATCY | 1 cut(s) | 189 |
| SaqAI | TTAA | 6 cut(s) | 75, 126, 212, 216, 399, 512 |
| Sau3AI | GATC | 5 cut(s) | 94, 159, 189, 333, 424 |
| Sau96I | GGNCC | 2 cut(s) | 35, 521 |
| ScrFI | CCNGG | 3 cut(s) | 111, 519, 534 |
| SduI | GDGCHC | 1 cut(s) | 371 |
| SetI | ASST | 2 cut(s) | 63, 115 |
| SfaNI | GCATC | 1 cut(s) | 301 |
| SinI | GGWCC | 1 cut(s) | 521 |
| Sse9I | AATT | 6 cut(s) | 131, 141, 213, 306, 460, 493 |
| SsiI | CCGC | 2 cut(s) | 173, 524 |
| StyD4I | CCNGG | 3 cut(s) | 109, 517, 532 |
| TaaI | ACNGT | 2 cut(s) | 153, 364 |
| TaqI | TCGA | 1 cut(s) | 97 |
| TasI | AATT | 6 cut(s) | 131, 141, 213, 306, 460, 493 |
| TfiI | GAWTC | 1 cut(s) | 251 |
| Tru1I | TTAA | 6 cut(s) | 75, 126, 212, 216, 399, 512 |
| Tru9I | TTAA | 6 cut(s) | 75, 126, 212, 216, 399, 512 |
| TscAI | CASTG | 1 cut(s) | 394 |
| TspDTI | ATGAA | 1 cut(s) | 497 |
| TspRI | CASTG | 1 cut(s) | 394 |
| VpaK11BI | GGWCC | 1 cut(s) | 521 |
| XapI | RAATTY | 1 cut(s) | 493 |
| XceI | RCATGY | 2 cut(s) | 318, 557 |
| XmiI | GTMKAC | 1 cut(s) | 550 |
| Zsp2I | ATGCAT | 1 cut(s) | 316 |