FvH4_4g15603

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000087
Physical Location & Seq
Forward (+)
19425244 .. 19427553
2310 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g15603.t1

Sequence Viewer

Length: 2028 bp
ATGGATCATAGGGCAACTGGCGCTAGTGGTTCCGGCTCCTTTCAGCGGTCTCTCGTTGATGACGATGAAAGGATGGAAGGATATTTGCAGTGGCCTTCACGCAACGTTCCCGCTCGGGCAGTTTCTCCAGTAGAGTCTTCTCGCTCGGGCCCTGAGCATGGAGATGTCCCCGCTCAAGATAGCGGCGAGGGGATAGTTTTTGAGGCTATACCCATCACCCGGACCCTACACCGACTGGAGGATGGTAGGGTCTGCGATGAACCGGAGTGTAGCTTCATGCCCGAGGAGATCAGACGCTTCAAAGAGGACTGGGACATTCCTTCAGACCTCCCACTACGCAGATTACGTCCCGGAGAGCTATCTTGTGCTCCTCAAGACAACTTCATCGCAGTGCATGACAATATGTTTAGGAACGGATTCTTGGTGCCTCTTCCTCAATACGTACAATACATGTTGAGTATGCTGCAATTGGCTCCCGGGCAAGTACCTCCAAATCAGTGGCACCAGCTACTGGGACTCAGATGTTTGTACTATCTGTCCAACATGGGGTGGCCAACGATTAACGAGTTTCGCGCCCTGTACCGATTGTCATATTCAAAGAAGGCCGGGAGCTCCGGGTGCGTAAACTTTACTGCTCGGGATTATGAGTCGATCGTCACCGATCTCCCGTCTTCCAAAAACAAGGAGTGGCGCGCGAAGGTTATTTTGGTGGGCAGTTCGTGGCAGCGAAAGACCAAATGGCATACCGTTCTCAACTATTTCCGGGCCATTGGAGATCAAGACTACTCGCTGACAGCGATCGAGCGCGAGCGTATAGCTCGGGTTTTTGCAGCGTGGCCTTCCGAAGAGGATCGCAGCTCGTATCACCTTACTCGATACCTTGTCGGATCAATACTTAGACTTTTCTTGCTTGCAGGAAAAATCCCTCAACGTGTTCCGCGTCCTAATCACCCGTTGGATATGGATAAGGACCATGATCTTCTTGAGAAGCTGCTGTCAAAGGGGGAGGCTGCCTCCCGGACGGAGGTGGACCTGGACACGCAGTCCGTGCGTGTTTTGGAGACACCTAAATTGCTAGAAGTGGCGGATTCTGCTTACGGGACAACGGCCCCGCCGCCGCAACCTCCTCCCAGAGGATCCCAGGTGGTGAATCTGGGTGAGAAGAAGAAACGCCACCACCACCACTCGAAGAAGAAGGGCCAGGCTGTTTTGGATTCCCAGGTGACCTATACCGGGAAGGATGTCTCAGGGGATCTTGCCCCTAACCCGAAGAGGCATAAGGCTGCGTCCGGGGGTTTAACTCCCTCATTGTCATTGCTTCCTCCTCCCCTTCCTACCGTCATGAGGACCCCGATCAGGCAGGTCCTTGATGAATACGGATGCGCCGACGAGAAATTTGTGCGCGCTCTCTTCGCGGTGCATTCTATTGATGCCAGCGAGGACACTCCTGAGCTCAAGGAGCAAGTGGCCAAGCTGAATGGTTACGTGAGCTATCTGCAGACCGAGAAAGGGTCTTTGAAGAGGGAAAAGAATGCCCTGGCTGAAAAATTGGCCATGATGCAACTGCATGTCCAGGAGGTGGAGGGCAAAGCCAACCGGGTCCCGGAGCTTGAAGCAGAGGTCGAATCTCTGCGCCTGGTGGTTGAGAAGCTTCGAGCAGGAACCGTTCCATTGGAGAGTAAGCTCCGAGTGAAAGAGTCCGAGCTCGCGGAGACTGAGCGTTTTGTTCCCTCGCTCTGCGACCAGGCTGTGGCAGAGTACAAGGAATCCCAAAAGCTGAAGGATCTTTTGAAAGCTGCCCGGGATGACGCTATCACCGAGAAGTTCACAGAGTGGAGTGATCACGGATACCTCGACAAGGCCCGGATGATGGCTGACTTACTTGCCGTAAAGGCAAAAGCTAAAGCCCAGGATTCCCAGGCTGCCTTCACCGAGTGTCCTCCCGAGGCTAACGTAGAGACTGTCGGAGATGACAAAGCATCCGATAGTGAGGATGACGAGCTCGGTGTCCCGGCCGAGAAGGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

676

Amino Acids

75.63

Weight (kDa)

5.89

Isoelectric Point (pI)

45.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1351
AccB1I GGYRCC 2 cut(s) 424, 501
AccB7I CCANNNNNTGG 3 cut(s) 511, 1579, 1750
AccBSI CCGCTC 2 cut(s) 113, 173
AccII CGCG 8 cut(s) 573, 693, 695, 807, 940, 1404, 1415, 1709
AclI AACGTT 1 cut(s) 105
AclWI GGATC 7 cut(s) 12, 858, 895, 1131, 1144, 1260, 1791
AcoI YGGCCR 4 cut(s) 551, 1467, 1551, 2013
AcsI RAATTY 1 cut(s) 1394
AcuI CTGAAG 2 cut(s) 306, 1799
AdeI CACNNNGTG 2 cut(s) 1833, 1935
AfaI GTAC 5 cut(s) 444, 486, 530, 581, 1760
AflIII ACRYGT 2 cut(s) 450, 931
AgsI TTSAA 5 cut(s) 301, 597, 1519, 1613, 1792
AhdI GACNNNNNGTC 1 cut(s) 1042
AjuI GAANNNNNNNTTGG 4 cut(s) 404, 436, 689, 721
Alw21I GWGCWC 5 cut(s) 370, 614, 1455, 1707, 2004
Alw26I GTCTC 5 cut(s) 54, 1055, 1249, 1706, 1952
AlwI GGATC 7 cut(s) 12, 858, 895, 1131, 1144, 1260, 1791
AlwNI CAGNNNCTG 1 cut(s) 511
Ama87I CYCGRG 8 cut(s) 114, 145, 281, 476, 636, 819, 1800, 1943
ApaI GGGCCC 1 cut(s) 152
ApeKI GCWGC 9 cut(s) 463, 724, 830, 855, 991, 1010, 1283, 1796, 1922
ApoI RAATTY 1 cut(s) 1394
ArsI GACNNNNNNTTYG 2 cut(s) 1379, 1411
Asp700I GAANNNNTTC 1 cut(s) 416
AspLEI GCGC 9 cut(s) 23, 575, 693, 695, 807, 1385, 1404, 1406, 1635
AsuHPI GGTGA 9 cut(s) 208, 649, 857, 941, 1159, 1169, 1234, 1807, 1921
AvaI CYCGRG 8 cut(s) 114, 145, 281, 476, 636, 819, 1800, 1943
AvaII GGWCC 6 cut(s) 222, 970, 1030, 1347, 1363, 1600
BaeGI GKGCMC 1 cut(s) 152
BalI TGGCCA 3 cut(s) 553, 1469, 1553
BamHI GGATCC 1 cut(s) 1136
BanI GGYRCC 2 cut(s) 424, 501
BanII GRGCYC 5 cut(s) 152, 614, 1455, 1707, 2004
BbsI GAAGAC 2 cut(s) 129, 663
Bbv12I GWGCWC 5 cut(s) 370, 614, 1455, 1707, 2004
BbvI GCAGC 9 cut(s) 450, 736, 842, 867, 978, 997, 1270, 1783, 1909
BccI CCATC 4 cut(s) 67, 221, 236, 1864
BceAI ACGGC 2 cut(s) 1122, 1871
BciVI GTATCC 1 cut(s) 1841
BclI TGATCA 1 cut(s) 1840
BcoDI GTCTC 5 cut(s) 54, 1055, 1249, 1706, 1952
BfaI CTAG 3 cut(s) 24, 1076, 2026
BfmI CTRYAG 1 cut(s) 1496
BfoI RGCGCY 1 cut(s) 24
BfuAI ACCTGC 1 cut(s) 1351
BfuI GTATCC 1 cut(s) 1841
BglI GCCNNNNNGGC 1 cut(s) 1892
Bme18I GGWCC 6 cut(s) 222, 970, 1030, 1347, 1363, 1600
BmeRI GACNNNNNGTC 1 cut(s) 1042
BmeT110I CYCGRG 8 cut(s) 114, 145, 281, 476, 636, 819, 1800, 1943
BmrI ACTGGG 2 cut(s) 319, 521
BmsI GCATC 4 cut(s) 1370, 1420, 1548, 1988
BmuI ACTGGG 2 cut(s) 319, 521
BpiI GAAGAC 2 cut(s) 129, 663
BplI GAGNNNNNCTC 2 cut(s) 998, 1030
BpmI CTGGAG 2 cut(s) 111, 257
Bpu10I CCTNAGC 2 cut(s) 153, 1449
BpuEI CTTGAG 4 cut(s) 159, 357, 1004, 1439
BsaAI YACGTR 2 cut(s) 442, 1486
BsaI GGTCTC 1 cut(s) 54
BsaWI WCCGGW 1 cut(s) 262
Bse1I ACTGG 5 cut(s) 22, 128, 240, 314, 516
Bse3DI GCAATG 1 cut(s) 1313
BseGI GGATG 8 cut(s) 78, 247, 1246, 1385, 1810, 1872, 1979, 1999
BseMI GCAATG 1 cut(s) 1313
BseMII CTCAG 5 cut(s) 144, 532, 1260, 1440, 1707
BseNI ACTGG 5 cut(s) 22, 128, 240, 314, 516
BsePI GCGCGC 2 cut(s) 691, 1402
BseRI GAGGAG 4 cut(s) 299, 360, 1116, 1314
BseSI GKGCMC 1 cut(s) 152
BseX3I CGGCCG 1 cut(s) 2013
BseXI GCAGC 9 cut(s) 450, 736, 842, 867, 978, 997, 1270, 1783, 1909
Bsh1236I CGCG 8 cut(s) 573, 693, 695, 807, 940, 1404, 1415, 1709
Bsh1285I CGRYCG 3 cut(s) 654, 801, 2016
BshNI GGYRCC 2 cut(s) 424, 501
BsiEI CGRYCG 3 cut(s) 654, 801, 2016
BsiHKAI GWGCWC 5 cut(s) 370, 614, 1455, 1707, 2004
BsiHKCI CYCGRG 8 cut(s) 114, 145, 281, 476, 636, 819, 1800, 1943
BslFI GGGAC 7 cut(s) 152, 326, 333, 528, 1114, 1586, 1994
BsmAI GTCTC 5 cut(s) 54, 1055, 1249, 1706, 1952
BsmFI GGGAC 7 cut(s) 152, 326, 333, 528, 1114, 1586, 1994
BsmI GAATGC 2 cut(s) 1420, 1537
Bso31I GGTCTC 1 cut(s) 54
BsoBI CYCGRG 8 cut(s) 114, 145, 281, 476, 636, 819, 1800, 1943
Bsp120I GGGCCC 1 cut(s) 148
Bsp1286I GDGCHC 6 cut(s) 152, 370, 614, 1455, 1707, 2004
BspCNI CTCAG 5 cut(s) 145, 531, 1259, 1441, 1708
BspFNI CGCG 8 cut(s) 573, 693, 695, 807, 940, 1404, 1415, 1709
BspHI TCATGA 1 cut(s) 1341
BspMAI CTGCAG 1 cut(s) 1500
BspMI ACCTGC 1 cut(s) 1351
BspPI GGATC 7 cut(s) 12, 858, 895, 1131, 1144, 1260, 1791
BspT107I GGYRCC 2 cut(s) 424, 501
BspTNI GGTCTC 1 cut(s) 54
BsrBI CCGCTC 2 cut(s) 113, 173
BsrDI GCAATG 1 cut(s) 1313
BsrI ACTGG 5 cut(s) 22, 128, 240, 314, 516
BssHII GCGCGC 2 cut(s) 691, 1402
Bst4CI ACNGT 4 cut(s) 748, 1339, 1666, 1963
Bst6I CTCTTC 5 cut(s) 435, 840, 1265, 1415, 1514
BstAPI GCANNNNNTGC 1 cut(s) 1048
BstBAI YACGTR 2 cut(s) 442, 1486
BstC8I GCNNGC 6 cut(s) 693, 809, 912, 1404, 1435, 1707
BstDEI CTNAG 6 cut(s) 153, 518, 896, 1246, 1449, 1716
BstEII GGTNACC 1 cut(s) 1222
BstENI CCTNNNNNAGG 2 cut(s) 1131, 1856
BstF5I GGATG 8 cut(s) 78, 247, 1246, 1385, 1810, 1872, 1979, 1999
BstFNI CGCG 8 cut(s) 573, 693, 695, 807, 940, 1404, 1415, 1709
BstH2I RGCGCY 1 cut(s) 24
BstHHI GCGC 9 cut(s) 23, 575, 693, 695, 807, 1385, 1404, 1406, 1635
BstMAI GTCTC 5 cut(s) 54, 1055, 1249, 1706, 1952
BstMCI CGRYCG 3 cut(s) 654, 801, 2016
BstMWI GCNNNNNNNGC 7 cut(s) 20, 618, 1048, 1091, 1412, 1459, 1892
BstNSI RCATGY 2 cut(s) 454, 1571
BstPI GGTNACC 1 cut(s) 1222
BstSFI CTRYAG 1 cut(s) 1496
BstSLI GKGCMC 1 cut(s) 152
BstSNI TACGTA 1 cut(s) 442
BstUI CGCG 8 cut(s) 573, 693, 695, 807, 940, 1404, 1415, 1709
BstV1I GCAGC 9 cut(s) 450, 736, 842, 867, 978, 997, 1270, 1783, 1909
BstV2I GAAGAC 2 cut(s) 129, 663
BstX2I RGATCY 3 cut(s) 1136, 1252, 1783
BstXI CCANNNNNNTGG 1 cut(s) 498
BstYI RGATCY 3 cut(s) 1136, 1252, 1783
BstZI CGGCCG 1 cut(s) 2013
BsuI GTATCC 1 cut(s) 1841
BtgZI GCGATG 2 cut(s) 270, 370
BtsCI GGATG 8 cut(s) 78, 247, 1246, 1385, 1810, 1872, 1979, 1999
BtsI GCAGTG 2 cut(s) 95, 396
BtsIMutI CAGTG 3 cut(s) 95, 396, 503
BveI ACCTGC 1 cut(s) 1351
Cac8I GCNNGC 6 cut(s) 693, 809, 912, 1404, 1435, 1707
CaiI CAGNNNCTG 1 cut(s) 511
CciI TCATGA 1 cut(s) 1341
CfoI GCGC 9 cut(s) 23, 575, 693, 695, 807, 1385, 1404, 1406, 1635
Cfr9I CCCGGG 2 cut(s) 476, 1800
CseI GACGC 4 cut(s) 303, 929, 1275, 1817
Csp6I GTAC 5 cut(s) 443, 485, 529, 580, 1759
CviAII CATG 9 cut(s) 158, 277, 395, 451, 544, 974, 1342, 1555, 1568
CviQI GTAC 5 cut(s) 443, 485, 529, 580, 1759
DdeI CTNAG 6 cut(s) 153, 518, 896, 1246, 1449, 1716
DraIII CACNNNGTG 2 cut(s) 1833, 1935
DriI GACNNNNNGTC 1 cut(s) 1042
EaeI YGGCCR 4 cut(s) 551, 1467, 1551, 2013
EagI CGGCCG 1 cut(s) 2013
Eam1104I CTCTTC 5 cut(s) 435, 840, 1265, 1415, 1514
Eam1105I GACNNNNNGTC 1 cut(s) 1042
EarI CTCTTC 5 cut(s) 435, 840, 1265, 1415, 1514
EciI GGCGGA 1 cut(s) 1100
Ecl136II GAGCTC 4 cut(s) 612, 1453, 1705, 2002
EclXI CGGCCG 1 cut(s) 2013
Eco105I TACGTA 1 cut(s) 442
Eco24I GRGCYC 5 cut(s) 152, 614, 1455, 1707, 2004
Eco31I GGTCTC 1 cut(s) 54
Eco47I GGWCC 6 cut(s) 222, 970, 1030, 1347, 1363, 1600
Eco52I CGGCCG 1 cut(s) 2013
Eco53kI GAGCTC 4 cut(s) 612, 1453, 1705, 2002
Eco57I CTGAAG 2 cut(s) 306, 1799
Eco88I CYCGRG 8 cut(s) 114, 145, 281, 476, 636, 819, 1800, 1943
Eco91I GGTNACC 1 cut(s) 1222
EcoICRI GAGCTC 4 cut(s) 612, 1453, 1705, 2002
EcoNI CCTNNNNNAGG 2 cut(s) 1131, 1856
EcoO109I RGGNCCY 4 cut(s) 149, 1347, 1363, 1600
EcoO65I GGTNACC 1 cut(s) 1222
EcoT38I GRGCYC 5 cut(s) 152, 614, 1455, 1707, 2004
FaeI CATG 9 cut(s) 161, 280, 398, 454, 547, 977, 1345, 1558, 1571
FaqI GGGAC 7 cut(s) 152, 326, 333, 528, 1114, 1586, 1994
FatI CATG 9 cut(s) 157, 276, 394, 450, 543, 973, 1341, 1554, 1567
FauI CCCGC 3 cut(s) 118, 178, 1119
FbaI TGATCA 1 cut(s) 1840
FokI GGATG 8 cut(s) 85, 254, 1253, 1392, 1817, 1879, 1966, 2006
FriOI GRGCYC 5 cut(s) 152, 614, 1455, 1707, 2004
FspBI CTAG 3 cut(s) 24, 1076, 2026
GlaI GCGC 9 cut(s) 22, 574, 692, 694, 806, 1384, 1403, 1405, 1634
GsuI CTGGAG 2 cut(s) 111, 257
HaeII RGCGCY 1 cut(s) 24
HgaI GACGC 4 cut(s) 303, 929, 1275, 1817
HhaI GCGC 9 cut(s) 23, 575, 693, 695, 807, 1385, 1404, 1406, 1635
Hin1II CATG 9 cut(s) 161, 280, 398, 454, 547, 977, 1345, 1558, 1571
Hin6I GCGC 9 cut(s) 21, 573, 691, 693, 805, 1383, 1402, 1404, 1633
HinP1I GCGC 9 cut(s) 21, 573, 691, 693, 805, 1383, 1402, 1404, 1633
HindIII AAGCTT 1 cut(s) 1649
HphI GGTGA 9 cut(s) 208, 649, 857, 941, 1159, 1169, 1234, 1807, 1921
Hpy166II GTNNAC 3 cut(s) 625, 1030, 1827
Hpy188I TCNGA 9 cut(s) 293, 325, 521, 844, 887, 1688, 1702, 1967, 1984
Hpy188III TCNNGA 8 cut(s) 176, 374, 638, 779, 983, 1342, 1448, 1943
Hpy8I GTNNAC 3 cut(s) 625, 1030, 1827
Hpy99I CGWCG 1 cut(s) 1391
HpyCH4III ACNGT 4 cut(s) 748, 1339, 1666, 1963
HpyCH4IV ACGT 6 cut(s) 105, 346, 441, 931, 1485, 1953
HpyCH4V TGCA 9 cut(s) 88, 394, 466, 830, 914, 1420, 1498, 1561, 1567
HpyF10VI GCNNNNNNNGC 7 cut(s) 20, 618, 1048, 1091, 1412, 1459, 1892
HpyF3I CTNAG 6 cut(s) 153, 518, 896, 1246, 1449, 1716
HpySE526I ACGT 6 cut(s) 105, 346, 441, 931, 1485, 1953
Hsp92II CATG 9 cut(s) 161, 280, 398, 454, 547, 977, 1345, 1558, 1571
HspAI GCGC 9 cut(s) 21, 573, 691, 693, 805, 1383, 1402, 1404, 1633
KflI GGGWCCC 1 cut(s) 1600
Ksp22I TGATCA 1 cut(s) 1840
LmnI GCTCC 8 cut(s) 41, 373, 478, 609, 617, 1459, 1606, 1689
Lsp1109I GCAGC 9 cut(s) 450, 736, 842, 867, 978, 997, 1270, 1783, 1909
LweI GCATC 4 cut(s) 1370, 1420, 1548, 1988
MaeI CTAG 3 cut(s) 24, 1076, 2026
MaeII ACGT 6 cut(s) 105, 346, 441, 931, 1485, 1953
MaeIII GTNAC 3 cut(s) 655, 1222, 1481
MbiI CCGCTC 2 cut(s) 113, 173
MfeI CAATTG 1 cut(s) 467
MflI RGATCY 3 cut(s) 1136, 1252, 1783
MhlI GDGCHC 6 cut(s) 152, 370, 614, 1455, 1707, 2004
MlsI TGGCCA 3 cut(s) 553, 1469, 1553
MluCI AATT 4 cut(s) 467, 1070, 1394, 1547
MluNI TGGCCA 3 cut(s) 553, 1469, 1553
MlyI GAGTC 4 cut(s) 143, 510, 656, 1706
MmeI TCCRAC 4 cut(s) 564, 865, 936, 1945
Mox20I TGGCCA 3 cut(s) 553, 1469, 1553
MroXI GAANNNNTTC 1 cut(s) 416
MscI TGGCCA 3 cut(s) 553, 1469, 1553
MseI TTAA 2 cut(s) 561, 1298
MslI CAYNNNNRTG 2 cut(s) 162, 389
Msp20I TGGCCA 3 cut(s) 553, 1469, 1553
MspA1I CMGCKG 1 cut(s) 46
MunI CAATTG 1 cut(s) 467
Mva1269I GAATGC 2 cut(s) 1420, 1537
MvnI CGCG 8 cut(s) 573, 693, 695, 807, 940, 1404, 1415, 1709
MwoI GCNNNNNNNGC 7 cut(s) 20, 618, 1048, 1091, 1412, 1459, 1892
NlaIII CATG 9 cut(s) 161, 280, 398, 454, 547, 977, 1345, 1558, 1571
NmuCI GTSAC 2 cut(s) 655, 1222
NspI RCATGY 2 cut(s) 454, 1571
PagI TCATGA 1 cut(s) 1341
PauI GCGCGC 2 cut(s) 691, 1402
PciI ACATGT 1 cut(s) 450
PcsI WCGNNNNNNNCGW 7 cut(s) 60, 343, 794, 937, 1383, 1815, 1851
PctI GAATGC 2 cut(s) 1420, 1537
PdmI GAANNNNTTC 1 cut(s) 416
PfeI GAWTC 7 cut(s) 417, 1088, 1150, 1214, 1625, 1766, 1913
PflMI CCANNNNNTGG 3 cut(s) 511, 1579, 1750
PfoI TCCNGGA 4 cut(s) 349, 1016, 1572, 1602
Ple19I CGATCG 2 cut(s) 654, 801
PleI GAGTC 4 cut(s) 142, 510, 655, 1705
PpsI GAGTC 4 cut(s) 142, 510, 655, 1705
Ppu21I YACGTR 2 cut(s) 442, 1486
PpuMI RGGWCCY 3 cut(s) 1347, 1363, 1600
PscI ACATGT 1 cut(s) 450
Psp124BI GAGCTC 4 cut(s) 614, 1455, 1707, 2004
Psp1406I AACGTT 1 cut(s) 105
Psp5II RGGWCCY 3 cut(s) 1347, 1363, 1600
PspEI GGTNACC 1 cut(s) 1222
PspOMI GGGCCC 1 cut(s) 148
PspPPI RGGWCCY 3 cut(s) 1347, 1363, 1600
PstI CTGCAG 1 cut(s) 1500
PstNI CAGNNNCTG 1 cut(s) 511
PsuI RGATCY 3 cut(s) 1136, 1252, 1783
PteI GCGCGC 2 cut(s) 691, 1402
PvuI CGATCG 2 cut(s) 654, 801
RsaI GTAC 5 cut(s) 444, 486, 530, 581, 1760
RsaNI GTAC 5 cut(s) 443, 485, 529, 580, 1759
RseI CAYNNNNRTG 2 cut(s) 162, 389
SacI GAGCTC 4 cut(s) 614, 1455, 1707, 2004
SaqAI TTAA 2 cut(s) 561, 1298
SchI GAGTC 4 cut(s) 143, 510, 656, 1706
SduI GDGCHC 6 cut(s) 152, 370, 614, 1455, 1707, 2004
SfaNI GCATC 4 cut(s) 1370, 1420, 1548, 1988
SfcI CTRYAG 1 cut(s) 1496
SinI GGWCC 6 cut(s) 222, 970, 1030, 1347, 1363, 1600
SmaI CCCGGG 2 cut(s) 478, 1802
SmiMI CAYNNNNRTG 2 cut(s) 162, 389
SmlI CTYRAG 4 cut(s) 174, 372, 983, 1454
SmoI CTYRAG 4 cut(s) 174, 372, 983, 1454
SnaBI TACGTA 1 cut(s) 442
Sse9I AATT 4 cut(s) 467, 1070, 1394, 1547
SspMI CTAG 3 cut(s) 24, 1076, 2026
SstI GAGCTC 4 cut(s) 614, 1455, 1707, 2004
TaaI ACNGT 4 cut(s) 748, 1339, 1666, 1963
TaiI ACGT 6 cut(s) 108, 349, 444, 934, 1488, 1956
TaqI TCGA 7 cut(s) 650, 801, 874, 1187, 1623, 1654, 1854
TaqII GACCGA 1 cut(s) 1517
TasI AATT 4 cut(s) 467, 1070, 1394, 1547
TatI WGTACW 2 cut(s) 528, 1758
TauI GCSGC 3 cut(s) 186, 1117, 1120
TfiI GAWTC 7 cut(s) 417, 1088, 1150, 1214, 1625, 1766, 1913
Tru1I TTAA 2 cut(s) 561, 1298
Tru9I TTAA 2 cut(s) 561, 1298
TscAI CASTG 3 cut(s) 95, 396, 503
TseFI GTSAC 2 cut(s) 655, 1222
TseI GCWGC 9 cut(s) 463, 724, 830, 855, 991, 1010, 1283, 1796, 1922
Tsp45I GTSAC 2 cut(s) 655, 1222
TspDTI ATGAA 5 cut(s) 81, 265, 273, 373, 1386
TspGWI ACGGA 5 cut(s) 429, 1036, 1037, 1392, 1860
TspMI CCCGGG 2 cut(s) 476, 1800
TspRI CASTG 3 cut(s) 95, 396, 503
Van91I CCANNNNNTGG 3 cut(s) 511, 1579, 1750
VpaK11BI GGWCC 6 cut(s) 222, 970, 1030, 1347, 1363, 1600
XagI CCTNNNNNAGG 2 cut(s) 1131, 1856
XapI RAATTY 1 cut(s) 1394
XceI RCATGY 2 cut(s) 454, 1571
XmaI CCCGGG 2 cut(s) 476, 1800
XmnI GAANNNNTTC 1 cut(s) 416
XspI CTAG 3 cut(s) 24, 1076, 2026
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.