Rmu_ssc0000372.1_g000011

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000372.1
OG0000087
Physical Location & Seq
Reverse (-)
36043 .. 37871
1829 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000372.1_g000011.1.cds

Sequence Viewer

Length: 993 bp
atggtgggttgtgaacccggcccatggcgtagtacctggaagtaccaatggggctcagaggctagtgctaaacttagtaagccacctccctgggacaagatgaggttgggtccctggaattttgagcctctggtacccaatggggcaaagagatggctgggctctgataccctatggggtagaaaatatgagcctccggtacccgatggggtagacattttgagcctccggtacccaatggggcaaagagagggctgggctctgataccctatggggtagaaaatatgagcttccggtacccgatgggactgggttgtgtaataaatggccgtccattcgccttccaaggcttcgagaaatgggggatgcgtgggacacgtgtagcgatcctatggctgagggcttttcggctaacccttgtgcttctggttccagatataacaagatttgaggtccccggtaccgtagttaggatggaattagaagccaggggtggggatactggatcgtcgtaccagtcttctgccaggcaagctgaggtagatatcgaccggtacttagcccgggtagatcaattagcagagaacacggggtcttcgactggggtgttctcggagagtagtgaggagtccgacgagggtgagagcgagggtggatccgcggaggccccggtagtcacagtggccattcccgagggcattcccaagctgaggtacacacttgcggacgggaccgtatgcgacgaacccgagagaagtatgacgatgaaggagatcatcgacatgcgactgaagtgggggataccggacgcggtggagcttaggcctcttagggatggagagatggccgcaaatcctgccccggggtgggtggcgctgcacgagaatcaattccaccaagggttatcgctaccgctgccccggtgcctacaatatctgctgcggatgctgaacctgtcaccggggcagctgaccccgaatgctgttcgctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

330

Amino Acids

36.79

Weight (kDa)

5.38

Isoelectric Point (pI)

36.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 5 cut(s) 133, 199, 231, 297, 461
AccB1I GGYRCC 6 cut(s) 133, 199, 231, 297, 461, 924
AccI GTMKAC 1 cut(s) 213
AccII CGCG 2 cut(s) 662, 812
AciI CCGC 7 cut(s) 660, 662, 725, 812, 849, 914, 943
AclWI GGATC 4 cut(s) 382, 514, 651, 664
AcoI YGGCCR 3 cut(s) 328, 684, 846
AcsI RAATTY 1 cut(s) 118
AcuI CTGAAG 1 cut(s) 812
AcvI CACGTG 1 cut(s) 380
AfiI CCNNNNNNNGG 8 cut(s) 24, 471, 495, 711, 863, 867, 868, 961
AflIII ACRYGT 2 cut(s) 377, 379
AgeI ACCGGT 1 cut(s) 552
AjnI CCWGG 5 cut(s) 35, 89, 113, 488, 527
AluBI AGCT 5 cut(s) 291, 536, 709, 820, 970
AluI AGCT 5 cut(s) 291, 536, 709, 820, 970
AlwI GGATC 4 cut(s) 382, 514, 651, 664
Ama87I CYCGRG 4 cut(s) 564, 692, 749, 862
AoxI GGCC 6 cut(s) 19, 328, 666, 684, 824, 846
ApeKI GCWGC 4 cut(s) 877, 916, 940, 967
ApoI RAATTY 1 cut(s) 118
AsiGI ACCGGT 1 cut(s) 552
Asp700I GAANNNNTTC 1 cut(s) 890
Asp718I GGTACC 5 cut(s) 133, 199, 231, 297, 461
AspLEI GCGC 1 cut(s) 877
AspS9I GGNCC 5 cut(s) 20, 110, 454, 667, 732
AsuC2I CCSGG 9 cut(s) 18, 459, 565, 566, 671, 863, 864, 922, 963
AsuHPI GGTGA 2 cut(s) 653, 951
AvaI CYCGRG 4 cut(s) 564, 692, 749, 862
AvaII GGWCC 3 cut(s) 110, 454, 732
BaeI ACNNNNGTAYC 2 cut(s) 453, 486
BalI TGGCCA 1 cut(s) 686
BamHI GGATCC 1 cut(s) 656
BanI GGYRCC 6 cut(s) 133, 199, 231, 297, 461, 924
BanII GRGCYC 3 cut(s) 56, 164, 262
BauI CACGAG 1 cut(s) 881
BbrPI CACGTG 1 cut(s) 380
BbsI GAAGAC 2 cut(s) 513, 588
BbvCI CCTCAGC 3 cut(s) 398, 537, 710
BbvI GCAGC 4 cut(s) 864, 903, 927, 979
BccI CCATC 6 cut(s) 147, 200, 298, 469, 830, 838
BceAI ACGGC 1 cut(s) 315
BciT130I CCWGG 5 cut(s) 37, 91, 115, 490, 529
BciVI GTATCC 2 cut(s) 493, 795
BcnI CCSGG 9 cut(s) 18, 459, 565, 566, 671, 863, 864, 922, 963
BfaI CTAG 2 cut(s) 63, 991
BfoI RGCGCY 1 cut(s) 878
BfuI GTATCC 2 cut(s) 493, 795
BisI GCNGC 5 cut(s) 849, 878, 917, 941, 968
BlsI GCNGC 5 cut(s) 850, 879, 918, 942, 969
Bme18I GGWCC 3 cut(s) 110, 454, 732
BmeT110I CYCGRG 4 cut(s) 564, 692, 749, 862
BmgT120I GGNCC 5 cut(s) 20, 110, 454, 667, 732
BmrI ACTGGG 2 cut(s) 320, 612
BmsI GCATC 2 cut(s) 357, 936
BmuI ACTGGG 2 cut(s) 320, 612
BpiI GAAGAC 2 cut(s) 513, 588
Bpu10I CCTNAGC 4 cut(s) 398, 537, 710, 821
BpuMI CCSGG 9 cut(s) 18, 459, 565, 566, 671, 863, 864, 922, 963
BsaAI YACGTR 1 cut(s) 380
BsaWI WCCGGW 5 cut(s) 196, 228, 294, 552, 805
Bsc4I CCNNNNNNNGG 8 cut(s) 24, 471, 495, 711, 863, 867, 868, 961
Bse118I RCCGGY 1 cut(s) 552
Bse1I ACTGG 4 cut(s) 315, 508, 517, 607
BseBI CCWGG 5 cut(s) 37, 91, 115, 490, 529
BseGI GGATG 4 cut(s) 372, 480, 841, 951
BseLI CCNNNNNNNGG 8 cut(s) 24, 471, 495, 711, 863, 867, 868, 961
BseMII CTCAG 4 cut(s) 69, 389, 528, 701
BseNI ACTGG 4 cut(s) 315, 508, 517, 607
BseRI GAGGAG 1 cut(s) 641
BseXI GCAGC 4 cut(s) 864, 903, 927, 979
BseYI CCCAGC 2 cut(s) 157, 255
BsgI GTGCAG 1 cut(s) 863
Bsh1236I CGCG 2 cut(s) 662, 812
Bsh1285I CGRYCG 1 cut(s) 553
BshFI GGCC 6 cut(s) 21, 330, 668, 686, 826, 848
BshNI GGYRCC 6 cut(s) 133, 199, 231, 297, 461, 924
BshTI ACCGGT 1 cut(s) 552
BsiEI CGRYCG 1 cut(s) 553
BsiHKCI CYCGRG 4 cut(s) 564, 692, 749, 862
BslFI GGGAC 6 cut(s) 96, 107, 321, 388, 440, 745
BslI CCNNNNNNNGG 8 cut(s) 24, 471, 495, 711, 863, 867, 868, 961
BsmFI GGGAC 6 cut(s) 96, 107, 321, 388, 440, 745
BsmI GAATGC 2 cut(s) 699, 985
BsnI GGCC 6 cut(s) 21, 330, 668, 686, 826, 848
BsoBI CYCGRG 4 cut(s) 564, 692, 749, 862
Bsp1286I GDGCHC 3 cut(s) 56, 164, 262
Bsp143I GATC 5 cut(s) 387, 506, 571, 656, 774
Bsp19I CCATGG 1 cut(s) 23
BspACI CCGC 7 cut(s) 660, 662, 725, 812, 849, 914, 943
BspANI GGCC 6 cut(s) 21, 330, 668, 686, 826, 848
BspCNI CTCAG 4 cut(s) 68, 390, 529, 702
BspFNI CGCG 2 cut(s) 662, 812
BspPI GGATC 4 cut(s) 382, 514, 651, 664
BspT107I GGYRCC 6 cut(s) 133, 199, 231, 297, 461, 924
BsrFI RCCGGY 1 cut(s) 552
BsrI ACTGG 4 cut(s) 315, 508, 517, 607
BssAI RCCGGY 1 cut(s) 552
BssMI GATC 5 cut(s) 387, 506, 571, 656, 774
BssSI CACGAG 1 cut(s) 881
BssT1I CCWWGG 3 cut(s) 23, 346, 898
Bst2BI CACGAG 1 cut(s) 881
Bst2UI CCWGG 5 cut(s) 37, 91, 115, 490, 529
Bst4CI ACNGT 3 cut(s) 466, 682, 736
BstAPI GCANNNNNTGC 1 cut(s) 857
BstBAI YACGTR 1 cut(s) 380
BstC8I GCNNGC 1 cut(s) 534
BstDEI CTNAG 8 cut(s) 55, 74, 398, 537, 559, 710, 821, 830
BstDSI CCRYGG 2 cut(s) 23, 660
BstF5I GGATG 4 cut(s) 372, 480, 841, 951
BstFNI CGCG 2 cut(s) 662, 812
BstH2I RGCGCY 1 cut(s) 878
BstHHI GCGC 1 cut(s) 877
BstKTI GATC 5 cut(s) 390, 509, 574, 659, 777
BstMBI GATC 5 cut(s) 387, 506, 571, 656, 774
BstMCI CGRYCG 1 cut(s) 553
BstMWI GCNNNNNNNGC 4 cut(s) 533, 857, 916, 946
BstNI CCWGG 5 cut(s) 37, 91, 115, 490, 529
BstNSI RCATGY 1 cut(s) 787
BstUI CGCG 2 cut(s) 662, 812
BstV1I GCAGC 4 cut(s) 864, 903, 927, 979
BstV2I GAAGAC 2 cut(s) 513, 588
BstX2I RGATCY 1 cut(s) 656
BstXI CCANNNNNNTGG 1 cut(s) 90
BstYI RGATCY 1 cut(s) 656
BsuI GTATCC 2 cut(s) 493, 795
BsuRI GGCC 6 cut(s) 21, 330, 668, 686, 826, 848
BtgI CCRYGG 2 cut(s) 23, 660
BtsCI GGATG 4 cut(s) 372, 480, 841, 951
BtsIMutI CAGTG 1 cut(s) 687
Cac8I GCNNGC 1 cut(s) 534
CfoI GCGC 1 cut(s) 877
Cfr10I RCCGGY 1 cut(s) 552
Cfr13I GGNCC 5 cut(s) 20, 110, 454, 667, 732
Cfr42I CCGCGG 1 cut(s) 663
Cfr9I CCCGGG 2 cut(s) 564, 862
CseI GACGC 1 cut(s) 818
CspAI ACCGGT 1 cut(s) 552
CviAII CATG 2 cut(s) 24, 784
DdeI CTNAG 8 cut(s) 55, 74, 398, 537, 559, 710, 821, 830
DpnI GATC 5 cut(s) 389, 508, 573, 658, 776
DpnII GATC 5 cut(s) 387, 506, 571, 656, 774
EaeI YGGCCR 3 cut(s) 328, 684, 846
Eco130I CCWWGG 3 cut(s) 23, 346, 898
Eco147I AGGCCT 1 cut(s) 826
Eco24I GRGCYC 3 cut(s) 56, 164, 262
Eco32I GATATC 1 cut(s) 547
Eco47I GGWCC 3 cut(s) 110, 454, 732
Eco57I CTGAAG 1 cut(s) 812
Eco72I CACGTG 1 cut(s) 380
Eco88I CYCGRG 4 cut(s) 564, 692, 749, 862
EcoO109I RGGNCCY 3 cut(s) 110, 454, 667
EcoRII CCWGG 5 cut(s) 35, 89, 113, 488, 527
EcoRV GATATC 1 cut(s) 547
EcoT14I CCWWGG 3 cut(s) 23, 346, 898
EcoT38I GRGCYC 3 cut(s) 56, 164, 262
ErhI CCWWGG 3 cut(s) 23, 346, 898
FaeI CATG 2 cut(s) 27, 787
FaqI GGGAC 6 cut(s) 96, 107, 321, 388, 440, 745
FatI CATG 2 cut(s) 23, 783
FblI GTMKAC 1 cut(s) 213
Fnu4HI GCNGC 5 cut(s) 849, 878, 917, 941, 968
FokI GGATG 4 cut(s) 379, 487, 848, 958
FriOI GRGCYC 3 cut(s) 56, 164, 262
Fsp4HI GCNGC 5 cut(s) 849, 878, 917, 941, 968
FspBI CTAG 2 cut(s) 63, 991
GlaI GCGC 1 cut(s) 876
GluI GCNGC 5 cut(s) 849, 878, 917, 941, 968
GsaI CCCAGC 2 cut(s) 161, 259
HaeII RGCGCY 1 cut(s) 878
HaeIII GGCC 6 cut(s) 21, 330, 668, 686, 826, 848
HgaI GACGC 1 cut(s) 818
HhaI GCGC 1 cut(s) 877
Hin1II CATG 2 cut(s) 27, 787
Hin6I GCGC 1 cut(s) 875
HinP1I GCGC 1 cut(s) 875
HinfI GANTC 2 cut(s) 629, 886
HphI GGTGA 2 cut(s) 653, 951
Hpy166II GTNNAC 3 cut(s) 14, 214, 717
Hpy188I TCNGA 5 cut(s) 58, 166, 264, 616, 634
Hpy188III TCNNGA 3 cut(s) 355, 434, 692
Hpy8I GTNNAC 3 cut(s) 14, 214, 717
Hpy99I CGWCG 3 cut(s) 514, 638, 746
HpyAV CCTTC 2 cut(s) 352, 763
HpyCH4III ACNGT 3 cut(s) 466, 682, 736
HpyCH4IV ACGT 1 cut(s) 379
HpyCH4V TGCA 1 cut(s) 880
HpyF10VI GCNNNNNNNGC 4 cut(s) 533, 857, 916, 946
HpyF3I CTNAG 8 cut(s) 55, 74, 398, 537, 559, 710, 821, 830
HpySE526I ACGT 1 cut(s) 379
Hsp92II CATG 2 cut(s) 27, 787
HspAI GCGC 1 cut(s) 875
KflI GGGWCCC 1 cut(s) 110
KpnI GGTACC 5 cut(s) 137, 203, 235, 301, 465
KspI CCGCGG 1 cut(s) 663
Kzo9I GATC 5 cut(s) 387, 506, 571, 656, 774
LmnI GCTCC 1 cut(s) 817
Lsp1109I GCAGC 4 cut(s) 864, 903, 927, 979
LweI GCATC 2 cut(s) 357, 936
MaeI CTAG 2 cut(s) 63, 991
MaeII ACGT 1 cut(s) 379
MaeIII GTNAC 2 cut(s) 676, 957
MalI GATC 5 cut(s) 389, 508, 573, 658, 776
MboI GATC 5 cut(s) 387, 506, 571, 656, 774
MboII GAAGA 2 cut(s) 513, 588
MflI RGATCY 1 cut(s) 656
MhlI GDGCHC 3 cut(s) 56, 164, 262
MlsI TGGCCA 1 cut(s) 686
MluCI AATT 4 cut(s) 118, 479, 575, 890
MluNI TGGCCA 1 cut(s) 686
MlyI GAGTC 1 cut(s) 638
MmeI TCCRAC 1 cut(s) 657
Mox20I TGGCCA 1 cut(s) 686
MroXI GAANNNNTTC 1 cut(s) 890
MscI TGGCCA 1 cut(s) 686
MslI CAYNNNNRTG 1 cut(s) 782
Msp20I TGGCCA 1 cut(s) 686
MspA1I CMGCKG 3 cut(s) 662, 916, 970
Mva1269I GAATGC 2 cut(s) 699, 985
MvaI CCWGG 5 cut(s) 37, 91, 115, 490, 529
MvnI CGCG 2 cut(s) 662, 812
MwoI GCNNNNNNNGC 4 cut(s) 533, 857, 916, 946
NciI CCSGG 9 cut(s) 18, 459, 565, 566, 671, 863, 864, 922, 963
NcoI CCATGG 1 cut(s) 23
NdeII GATC 5 cut(s) 387, 506, 571, 656, 774
NlaIII CATG 2 cut(s) 27, 787
NmuCI GTSAC 2 cut(s) 676, 957
NspI RCATGY 1 cut(s) 787
PasI CCCWGGG 1 cut(s) 90
PceI AGGCCT 1 cut(s) 826
PcsI WCGNNNNNNNCGW 1 cut(s) 596
PctI GAATGC 2 cut(s) 699, 985
PdmI GAANNNNTTC 1 cut(s) 890
PfeI GAWTC 1 cut(s) 886
PinAI ACCGGT 1 cut(s) 552
PkrI GCNGC 5 cut(s) 850, 879, 918, 942, 969
PleI GAGTC 1 cut(s) 637
PmaCI CACGTG 1 cut(s) 380
PmlI CACGTG 1 cut(s) 380
PpsI GAGTC 1 cut(s) 637
Ppu21I YACGTR 1 cut(s) 380
PpuMI RGGWCCY 2 cut(s) 110, 454
Psp5II RGGWCCY 2 cut(s) 110, 454
Psp6I CCWGG 5 cut(s) 35, 89, 113, 488, 527
PspCI CACGTG 1 cut(s) 380
PspFI CCCAGC 2 cut(s) 157, 255
PspGI CCWGG 5 cut(s) 35, 89, 113, 488, 527
PspPI GGNCC 5 cut(s) 20, 110, 454, 667, 732
PspPPI RGGWCCY 2 cut(s) 110, 454
PsuI RGATCY 1 cut(s) 656
PvuII CAGCTG 1 cut(s) 970
RseI CAYNNNNRTG 1 cut(s) 782
SacII CCGCGG 1 cut(s) 663
SatI GCNGC 5 cut(s) 849, 878, 917, 941, 968
Sau3AI GATC 5 cut(s) 387, 506, 571, 656, 774
Sau96I GGNCC 5 cut(s) 20, 110, 454, 667, 732
SchI GAGTC 1 cut(s) 638
SduI GDGCHC 3 cut(s) 56, 164, 262
SfaNI GCATC 2 cut(s) 357, 936
Sfr303I CCGCGG 1 cut(s) 663
SgrBI CCGCGG 1 cut(s) 663
SinI GGWCC 3 cut(s) 110, 454, 732
SmaI CCCGGG 2 cut(s) 566, 864
SmiMI CAYNNNNRTG 1 cut(s) 782
Sse9I AATT 4 cut(s) 118, 479, 575, 890
SseBI AGGCCT 1 cut(s) 826
SsiI CCGC 7 cut(s) 660, 662, 725, 812, 849, 914, 943
SspMI CTAG 2 cut(s) 63, 991
StuI AGGCCT 1 cut(s) 826
StyI CCWWGG 3 cut(s) 23, 346, 898
TaaI ACNGT 3 cut(s) 466, 682, 736
TaiI ACGT 1 cut(s) 382
TaqI TCGA 4 cut(s) 354, 549, 599, 780
TasI AATT 4 cut(s) 118, 479, 575, 890
TauI GCSGC 1 cut(s) 851
TfiI GAWTC 1 cut(s) 886
TscAI CASTG 1 cut(s) 687
TseFI GTSAC 2 cut(s) 676, 957
TseI GCWGC 4 cut(s) 877, 916, 940, 967
Tsp45I GTSAC 2 cut(s) 676, 957
TspDTI ATGAA 1 cut(s) 782
TspMI CCCGGG 2 cut(s) 564, 862
TspRI CASTG 1 cut(s) 687
VpaK11BI GGWCC 3 cut(s) 110, 454, 732
XapI RAATTY 1 cut(s) 118
XceI RCATGY 1 cut(s) 787
XmaI CCCGGG 2 cut(s) 564, 862
XmiI GTMKAC 1 cut(s) 213
XmnI GAANNNNTTC 1 cut(s) 890
XspI CTAG 2 cut(s) 63, 991
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.