Rmu_sc0000605.1_g000020

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000605.1
OG0000087
Physical Location & Seq
Reverse (-)
67023 .. 69727
2705 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000605.1_g000020.1.cds

Sequence Viewer

Length: 2232 bp
atgccagtgtcgttgttgtgttgttgtagattatttaggtttgcttcgttttgtgggttttgggttaaatttctgggctttcctttgaatttctgggttttggataggctaacccttgtgcttctggttccagatatagcaagatttgaggtccgcggtaccatagttaggatggaatcagaagccaggggaggggatacgggatcgtcgtaccagtcctctgccaggcgagctgaaatggacatcgaccggtacctaggtcggaacacggggtcctcgactggggtgttctcggagagtagtggggagttcgacgagggtggatctgcggaggccccggtagttacagtggccattcctgagggcattccgaagccgaggtacacacttgcggacgggaccatatgcgatgaacctgggagaagcatgacgatgaaggagatagtagacatgcggctgaagtgggggataccgggcgcagtagagcttaggcctcttagggatggggaactggccgcaaatcctaccccggggtgggtggcgctgcacgagaatcagctccaccaagggttatcgctacccctgccccggtgcctacagtatctgctgcggatgctgaacctgtcaccggggcagctaaccccgaatgccgttcgtcaaatatgcagtatgatggccatgtgggacctgtgccagcaagggtggccttccataaatgagttccgcgcggtacacctggtactgtattctaggaagcggtcttgtgcgggtacggtgacctttgccgctagggactacgagccgctagttaccgatatgcctacctcgatgagcaaaaggtggaggaacaaagtgttcctagctggtgggcggtggcagataaaaaataaaaagtggcagctgaccggtaccttccaagctatcggggaccagtcctatacgctatcagaagtagaaaagaagaggatagcccgggtatatgccgtgtggtcagagaaagagaggagctcttataggttcatccggcactcaatactttttaggctagggttagggtggcttccagtgaaagccccaaagaggaaacctcggaaaggcaaggaggaagacaggatggatgatgctcagttaatggacatgctgatgagccagggagaagatgccctgcacatcgacgtcgacctagtgtcgaaaggcacgagtcggtcaattgaggagaccctgttggagattaccgatgagggatacggtgaacctgatcccgacgcccctgtgacccgcgccgcgcagacctccatggccgatgtcattacgatagctgacaccggggtgggtaaagtaccggcctcagtgcccatttcctctcgttccactgggagcgatgagatgttgctcccagggtaccggtgcaaagaggcagaagaaagatcacccgggaccagggccgtcgcctctcttggcttgttatctcccgccgttcctgtaatccccaagaatcccatcaagcagctgctgaatgaatacggggttgccgatgaaaaattcgtgcgggccatgcttggggatctgaaggacattgacctcgaccgggttcgagccaaagataatactccccaggagaatcgccgtctcacccgagagcactcttcagataatactccccaggagaatcgccgtctcacccgagagtcaatgatgcgggcactcttcaatgtgtacgccatcgacgccagcgaggaagatactcatctgaaggaggaggttagtaacctctccgggcaggtgaagtatcttcatggcaagaaggccaagttggagaaggagcgggactcgctgaggactgagatggccacctctaagcagcggattgcggagcttgagggtgaggttgctgaggcacgggaggaggtcaagaacgcccgggactccgaaaaaagggctgcagagtctgccgtctcatggaaggagaaggcagactctctggaggatcgccttcctgcggagaggcacgaggccgtggaggagtacaagtcctcggatgagcttatcgctatgctggctgctgcccaagataaggttgtcatcatgaagtttaaggagtgggtggcggccgggtacttagatgaagccaaatttaggtggggtctcctggagaaaaggaagaaggagcaggaggcggcggccaaatccggtgccggtgggtctcagagtaccgatggagatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

743

Amino Acids

83.22

Weight (kDa)

6.6

Isoelectric Point (pI)

43.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1771
AatII GACGTC 1 cut(s) 1179
Acc36I ACCTGC 1 cut(s) 1771
Acc65I GGTACC 4 cut(s) 158, 252, 908, 1401
AccB1I GGYRCC 6 cut(s) 158, 252, 591, 908, 1401, 2192
AccBSI CCGCTC 1 cut(s) 1825
AccI GTMKAC 2 cut(s) 447, 1179
AccII CGCG 5 cut(s) 156, 726, 728, 1281, 1286
AclWI GGATC 5 cut(s) 211, 331, 1253, 1572, 1995
AcoI YGGCCR 7 cut(s) 351, 513, 675, 1299, 1848, 2109, 2181
AcsI RAATTY 4 cut(s) 68, 88, 1541, 2132
AcuI CTGAAG 4 cut(s) 479, 1589, 1632, 1772
AcyI GRCGYC 3 cut(s) 1176, 1266, 1728
AgeI ACCGGT 3 cut(s) 249, 905, 1404
AgsI TTSAA 2 cut(s) 88, 1711
AhdI GACNNNNNGTC 1 cut(s) 1186
AjuI GAANNNNNNNTTGG 2 cut(s) 1796, 1828
AleI CACNNNNGTG 1 cut(s) 1328
AloI GAACNNNNNNTCC 2 cut(s) 257, 289
Alw21I GWGCWC 2 cut(s) 1010, 1644
Alw26I GTCTC 6 cut(s) 1211, 1634, 1682, 1960, 2150, 2208
AlwI GGATC 5 cut(s) 211, 331, 1253, 1572, 1995
AlwNI CAGNNNCTG 3 cut(s) 604, 1513, 1949
Ama87I CYCGRG 6 cut(s) 529, 972, 1433, 1635, 1683, 1920
ApoI RAATTY 4 cut(s) 68, 88, 1541, 2132
AsiGI ACCGGT 3 cut(s) 249, 905, 1404
Asp718I GGTACC 4 cut(s) 158, 252, 908, 1401
AspA2I CCTAGG 1 cut(s) 256
AspLEI GCGC 5 cut(s) 479, 544, 728, 1283, 1288
AspS9I GGNCC 9 cut(s) 151, 273, 334, 399, 685, 928, 1437, 1443, 1551
AsuHPI GGTGA 8 cut(s) 618, 787, 1262, 1422, 1624, 1672, 1795, 1895
AvaI CYCGRG 6 cut(s) 529, 972, 1433, 1635, 1683, 1920
AvaII GGWCC 6 cut(s) 151, 273, 399, 685, 928, 1437
AvrII CCTAGG 1 cut(s) 256
AxyI CCTNAGG 1 cut(s) 360
BaeGI GKGCMC 2 cut(s) 1356, 1705
BaeI ACNNNNGTAYC 4 cut(s) 150, 183, 244, 277
BalI TGGCCA 3 cut(s) 353, 677, 1850
BanI GGYRCC 6 cut(s) 158, 252, 591, 908, 1401, 2192
BanII GRGCYC 1 cut(s) 1010
BarI GAAGNNNNNNTAC 2 cut(s) 365, 397
BauI CACGAG 3 cut(s) 548, 1198, 2009
BbsI GAAGAC 1 cut(s) 1113
Bbv12I GWGCWC 2 cut(s) 1010, 1644
BbvCI CCTCAGC 2 cut(s) 1835, 1893
BccI CCATC 8 cut(s) 166, 497, 667, 1108, 1508, 1730, 1840, 2210
BceAI ACGGC 8 cut(s) 635, 968, 1430, 1460, 1611, 1659, 1937, 2000
BciVI GTATCC 3 cut(s) 190, 462, 1238
BcoDI GTCTC 6 cut(s) 1211, 1634, 1682, 1960, 2150, 2208
BfaI CTAG 7 cut(s) 257, 750, 789, 806, 860, 1046, 1184
BfmI CTRYAG 2 cut(s) 596, 1941
BfoI RGCGCY 1 cut(s) 545
BfuAI ACCTGC 1 cut(s) 1771
BfuI GTATCC 3 cut(s) 190, 462, 1238
BlnI CCTAGG 1 cut(s) 256
Bme18I GGWCC 6 cut(s) 151, 273, 399, 685, 928, 1437
BmeRI GACNNNNNGTC 1 cut(s) 1186
BmeT110I CYCGRG 6 cut(s) 529, 972, 1433, 1635, 1683, 1920
BmgT120I GGNCC 9 cut(s) 151, 273, 334, 399, 685, 928, 1437, 1443, 1551
BmrI ACTGGG 2 cut(s) 291, 1383
BmsI GCATC 4 cut(s) 603, 1111, 1150, 1686
BmuI ACTGGG 2 cut(s) 291, 1383
BpiI GAAGAC 1 cut(s) 1113
BplI GAGNNNNNCTC 6 cut(s) 992, 1024, 1072, 1104, 1814, 1846
BpmI CTGGAG 2 cut(s) 2003, 2171
Bpu10I CCTNAGC 3 cut(s) 488, 1835, 1893
BpuEI CTTGAG 1 cut(s) 1898
BsaBI GATNNNNATC 2 cut(s) 1746, 2220
BsaHI GRCGYC 3 cut(s) 1176, 1266, 1728
BsaI GGTCTC 3 cut(s) 1211, 2150, 2208
BsaWI WCCGGW 4 cut(s) 249, 905, 1404, 2189
BsaXI ACNNNNNCTCC 4 cut(s) 1208, 1238, 2015, 2045
Bse118I RCCGGY 5 cut(s) 249, 905, 1342, 1404, 2195
Bse1I ACTGG 7 cut(s) 5, 214, 286, 516, 931, 1064, 1378
Bse21I CCTNAGG 1 cut(s) 360
Bse8I GATNNNNATC 2 cut(s) 1746, 2220
BseGI GGATG 7 cut(s) 177, 508, 618, 1020, 1119, 1123, 2044
BseJI GATNNNNATC 2 cut(s) 1746, 2220
BseMII CTCAG 7 cut(s) 351, 1139, 1362, 1826, 1833, 1884, 2219
BseNI ACTGG 7 cut(s) 5, 214, 286, 516, 931, 1064, 1378
BseRI GAGGAG 5 cut(s) 1018, 1229, 1772, 1919, 2036
BseSI GKGCMC 2 cut(s) 1356, 1705
BseX3I CGGCCG 1 cut(s) 2109
BsgI GTGCAG 2 cut(s) 530, 1151
Bsh1236I CGCG 5 cut(s) 156, 726, 728, 1281, 1286
Bsh1285I CGRYCG 3 cut(s) 250, 1588, 2112
BshNI GGYRCC 6 cut(s) 158, 252, 591, 908, 1401, 2192
BshTI ACCGGT 3 cut(s) 249, 905, 1404
BsiEI CGRYCG 3 cut(s) 250, 1588, 2112
BsiHKAI GWGCWC 2 cut(s) 1010, 1644
BsiHKCI CYCGRG 6 cut(s) 529, 972, 1433, 1635, 1683, 1920
BslFI GGGAC 7 cut(s) 412, 698, 806, 941, 1450, 1841, 1937
BsmAI GTCTC 6 cut(s) 1211, 1634, 1682, 1960, 2150, 2208
BsmBI CGTCTC 3 cut(s) 1634, 1682, 1960
BsmFI GGGAC 7 cut(s) 412, 698, 806, 941, 1450, 1841, 1937
BsmI GAATGC 2 cut(s) 366, 652
Bso31I GGTCTC 3 cut(s) 1211, 2150, 2208
BsoBI CYCGRG 6 cut(s) 529, 972, 1433, 1635, 1683, 1920
Bsp1286I GDGCHC 4 cut(s) 1010, 1356, 1644, 1705
Bsp143I GATC 7 cut(s) 203, 323, 1258, 1427, 1564, 1987, 2221
Bsp19I CCATGG 1 cut(s) 1296
BspCNI CTCAG 7 cut(s) 352, 1138, 1361, 1827, 1834, 1885, 2218
BspFNI CGCG 5 cut(s) 156, 726, 728, 1281, 1286
BspHI TCATGA 1 cut(s) 2085
BspMAI CTGCAG 1 cut(s) 1945
BspMI ACCTGC 1 cut(s) 1771
BspPI GGATC 5 cut(s) 211, 331, 1253, 1572, 1995
BspT107I GGYRCC 6 cut(s) 158, 252, 591, 908, 1401, 2192
BspTNI GGTCTC 3 cut(s) 1211, 2150, 2208
BsrBI CCGCTC 1 cut(s) 1825
BsrFI RCCGGY 5 cut(s) 249, 905, 1342, 1404, 2195
BsrI ACTGG 7 cut(s) 5, 214, 286, 516, 931, 1064, 1378
BssAI RCCGGY 5 cut(s) 249, 905, 1342, 1404, 2195
BssMI GATC 7 cut(s) 203, 323, 1258, 1427, 1564, 1987, 2221
BssNI GRCGYC 3 cut(s) 1176, 1266, 1728
BssSI CACGAG 3 cut(s) 548, 1198, 2009
BssT1I CCWWGG 3 cut(s) 256, 565, 1296
Bst2BI CACGAG 3 cut(s) 548, 1198, 2009
Bst4CI ACNGT 5 cut(s) 349, 600, 744, 775, 1250
Bst6I CTCTTC 3 cut(s) 956, 1651, 1712
BstACI GRCGYC 3 cut(s) 1176, 1266, 1728
BstAPI GCANNNNNTGC 1 cut(s) 1949
BstC8I GCNNGC 6 cut(s) 231, 695, 1551, 1701, 1732, 2058
BstDSI CCRYGG 3 cut(s) 154, 1296, 2016
BstEII GGTNACC 1 cut(s) 775
BstENI CCTNNNNNAGG 2 cut(s) 223, 1092
BstF5I GGATG 7 cut(s) 177, 508, 618, 1020, 1119, 1123, 2044
BstFNI CGCG 5 cut(s) 156, 726, 728, 1281, 1286
BstH2I RGCGCY 1 cut(s) 545
BstHHI GCGC 5 cut(s) 479, 544, 728, 1283, 1288
BstKTI GATC 7 cut(s) 206, 326, 1261, 1430, 1567, 1990, 2224
BstMAI GTCTC 6 cut(s) 1211, 1634, 1682, 1960, 2150, 2208
BstMBI GATC 7 cut(s) 203, 323, 1258, 1427, 1564, 1987, 2221
BstMCI CGRYCG 3 cut(s) 250, 1588, 2112
BstMWI GCNNNNNNNGC 9 cut(s) 230, 583, 613, 703, 1555, 1727, 1831, 1949, 2057
BstNSI RCATGY 2 cut(s) 454, 1141
BstPI GGTNACC 1 cut(s) 775
BstSFI CTRYAG 2 cut(s) 596, 1941
BstSLI GKGCMC 2 cut(s) 1356, 1705
BstUI CGCG 5 cut(s) 156, 726, 728, 1281, 1286
BstV2I GAAGAC 1 cut(s) 1113
BstX2I RGATCY 2 cut(s) 323, 1564
BstYI RGATCY 2 cut(s) 323, 1564
BstZI CGGCCG 1 cut(s) 2109
Bsu36I CCTNAGG 1 cut(s) 360
BsuI GTATCC 3 cut(s) 190, 462, 1238
BtgI CCRYGG 3 cut(s) 154, 1296, 2016
BtgZI GCGATG 2 cut(s) 423, 1395
BtsCI GGATG 7 cut(s) 177, 508, 618, 1020, 1119, 1123, 2044
BtsIMutI CAGTG 5 cut(s) 12, 354, 1071, 1356, 1371
BveI ACCTGC 1 cut(s) 1771
Cac8I GCNNGC 6 cut(s) 231, 695, 1551, 1701, 1732, 2058
CaiI CAGNNNCTG 3 cut(s) 604, 1513, 1949
CciI TCATGA 1 cut(s) 2085
CfoI GCGC 5 cut(s) 479, 544, 728, 1283, 1288
Cfr10I RCCGGY 5 cut(s) 249, 905, 1342, 1404, 2195
Cfr13I GGNCC 9 cut(s) 151, 273, 334, 399, 685, 928, 1437, 1443, 1551
Cfr42I CCGCGG 1 cut(s) 157
Cfr9I CCCGGG 4 cut(s) 529, 972, 1433, 1920
CseI GACGC 2 cut(s) 1274, 1736
CsiI ACCWGGT 1 cut(s) 735
CspAI ACCGGT 3 cut(s) 249, 905, 1404
CviAII CATG 9 cut(s) 427, 451, 679, 1138, 1297, 1555, 1796, 1959, 2086
DpnI GATC 7 cut(s) 205, 325, 1260, 1429, 1566, 1989, 2223
DpnII GATC 7 cut(s) 203, 323, 1258, 1427, 1564, 1987, 2221
DriI GACNNNNNGTC 1 cut(s) 1186
EaeI YGGCCR 7 cut(s) 351, 513, 675, 1299, 1848, 2109, 2181
EagI CGGCCG 1 cut(s) 2109
Eam1104I CTCTTC 3 cut(s) 956, 1651, 1712
Eam1105I GACNNNNNGTC 1 cut(s) 1186
EarI CTCTTC 3 cut(s) 956, 1651, 1712
Ecl136II GAGCTC 1 cut(s) 1008
EclXI CGGCCG 1 cut(s) 2109
Eco130I CCWWGG 3 cut(s) 256, 565, 1296
Eco147I AGGCCT 1 cut(s) 493
Eco24I GRGCYC 1 cut(s) 1010
Eco31I GGTCTC 3 cut(s) 1211, 2150, 2208
Eco47I GGWCC 6 cut(s) 151, 273, 399, 685, 928, 1437
Eco52I CGGCCG 1 cut(s) 2109
Eco53kI GAGCTC 1 cut(s) 1008
Eco57I CTGAAG 4 cut(s) 479, 1589, 1632, 1772
Eco81I CCTNAGG 1 cut(s) 360
Eco88I CYCGRG 6 cut(s) 529, 972, 1433, 1635, 1683, 1920
Eco91I GGTNACC 1 cut(s) 775
EcoICRI GAGCTC 1 cut(s) 1008
EcoNI CCTNNNNNAGG 2 cut(s) 223, 1092
EcoO109I RGGNCCY 3 cut(s) 273, 334, 685
EcoO65I GGTNACC 1 cut(s) 775
EcoT14I CCWWGG 3 cut(s) 256, 565, 1296
EcoT38I GRGCYC 1 cut(s) 1010
ErhI CCWWGG 3 cut(s) 256, 565, 1296
Esp3I CGTCTC 3 cut(s) 1634, 1682, 1960
FaeI CATG 9 cut(s) 430, 454, 682, 1141, 1300, 1558, 1799, 1962, 2089
FaqI GGGAC 7 cut(s) 412, 698, 806, 941, 1450, 1841, 1937
FatI CATG 9 cut(s) 426, 450, 678, 1137, 1296, 1554, 1795, 1958, 2085
FauI CCCGC 6 cut(s) 760, 1286, 1480, 1542, 1692, 1818
FauNDI CATATG 1 cut(s) 404
FblI GTMKAC 2 cut(s) 447, 1179
FokI GGATG 7 cut(s) 184, 515, 625, 1007, 1126, 1130, 2051
FriOI GRGCYC 1 cut(s) 1010
FspBI CTAG 7 cut(s) 257, 750, 789, 806, 860, 1046, 1184
GlaI GCGC 5 cut(s) 478, 543, 727, 1282, 1287
GsuI CTGGAG 2 cut(s) 2003, 2171
HaeII RGCGCY 1 cut(s) 545
HgaI GACGC 2 cut(s) 1274, 1736
HhaI GCGC 5 cut(s) 479, 544, 728, 1283, 1288
Hin1I GRCGYC 3 cut(s) 1176, 1266, 1728
Hin1II CATG 9 cut(s) 430, 454, 682, 1141, 1300, 1558, 1799, 1962, 2089
Hin6I GCGC 5 cut(s) 477, 542, 726, 1281, 1286
HinP1I GCGC 5 cut(s) 477, 542, 726, 1281, 1286
HincII GTYRAC 1 cut(s) 1180
HindII GTYRAC 1 cut(s) 1180
HphI GGTGA 8 cut(s) 618, 787, 1262, 1422, 1624, 1672, 1795, 1895
Hpy166II GTNNAC 6 cut(s) 384, 448, 733, 1180, 1253, 1717
Hpy188III TCNNGA 6 cut(s) 131, 359, 1262, 1912, 1982, 2086
Hpy8I GTNNAC 6 cut(s) 384, 448, 733, 1180, 1253, 1717
Hpy99I CGWCG 7 cut(s) 211, 317, 1178, 1181, 1268, 1451, 1730
HpyCH4III ACNGT 5 cut(s) 349, 600, 744, 775, 1250
HpyCH4IV ACGT 1 cut(s) 1176
HpyCH4V TGCA 5 cut(s) 547, 666, 1168, 1410, 1943
HpyF10VI GCNNNNNNNGC 9 cut(s) 230, 583, 613, 703, 1555, 1727, 1831, 1949, 2057
HpySE526I ACGT 1 cut(s) 1176
Hsp92I GRCGYC 3 cut(s) 1176, 1266, 1728
Hsp92II CATG 9 cut(s) 430, 454, 682, 1141, 1300, 1558, 1799, 1962, 2089
HspAI GCGC 5 cut(s) 477, 542, 726, 1281, 1286
KpnI GGTACC 4 cut(s) 162, 256, 912, 1405
KspI CCGCGG 1 cut(s) 157
Kzo9I GATC 7 cut(s) 203, 323, 1258, 1427, 1564, 1987, 2221
LmnI GCTCC 7 cut(s) 564, 1005, 1377, 1398, 1822, 1873, 2167
LweI GCATC 4 cut(s) 603, 1111, 1150, 1686
MabI ACCWGGT 1 cut(s) 735
MaeI CTAG 7 cut(s) 257, 750, 789, 806, 860, 1046, 1184
MaeII ACGT 1 cut(s) 1176
MaeIII GTNAC 6 cut(s) 343, 624, 775, 808, 1273, 1766
MalI GATC 7 cut(s) 205, 325, 1260, 1429, 1566, 1989, 2223
MbiI CCGCTC 1 cut(s) 1825
MboI GATC 7 cut(s) 203, 323, 1258, 1427, 1564, 1987, 2221
MboII GAAGA 9 cut(s) 973, 1118, 1169, 1433, 1638, 1699, 1751, 1784, 2173
MfeI CAATTG 1 cut(s) 1209
MflI RGATCY 2 cut(s) 323, 1564
MhlI GDGCHC 4 cut(s) 1010, 1356, 1644, 1705
MlsI TGGCCA 3 cut(s) 353, 677, 1850
MluCI AATT 5 cut(s) 68, 88, 1209, 1541, 2132
MluNI TGGCCA 3 cut(s) 353, 677, 1850
MlyI GAGTC 6 cut(s) 1210, 1697, 1823, 1919, 1955, 1970
MmeI TCCRAC 3 cut(s) 242, 1206, 1794
Mox20I TGGCCA 3 cut(s) 353, 677, 1850
MscI TGGCCA 3 cut(s) 353, 677, 1850
MseI TTAA 3 cut(s) 66, 1130, 2094
MslI CAYNNNNRTG 3 cut(s) 431, 1142, 1328
Msp20I TGGCCA 3 cut(s) 353, 677, 1850
MspA1I CMGCKG 4 cut(s) 156, 901, 1510, 1864
MteI GCGCNGCGC 1 cut(s) 1284
MunI CAATTG 1 cut(s) 1209
Mva1269I GAATGC 2 cut(s) 366, 652
MvnI CGCG 5 cut(s) 156, 726, 728, 1281, 1286
MwoI GCNNNNNNNGC 9 cut(s) 230, 583, 613, 703, 1555, 1727, 1831, 1949, 2057
NcoI CCATGG 1 cut(s) 1296
NdeI CATATG 1 cut(s) 404
NdeII GATC 7 cut(s) 203, 323, 1258, 1427, 1564, 1987, 2221
NlaIII CATG 9 cut(s) 430, 454, 682, 1141, 1300, 1558, 1799, 1962, 2089
NmeAIII GCCGAG 1 cut(s) 402
NmuCI GTSAC 3 cut(s) 624, 775, 1273
NspI RCATGY 2 cut(s) 454, 1141
OliI CACNNNNGTG 1 cut(s) 1328
PagI TCATGA 1 cut(s) 2085
PaqCI CACCTGC 1 cut(s) 1771
PasI CCCWGGG 1 cut(s) 1397
PceI AGGCCT 1 cut(s) 493
PcsI WCGNNNNNNNCGW 5 cut(s) 206, 275, 1196, 1530, 1731
PctI GAATGC 2 cut(s) 366, 652
PfeI GAWTC 5 cut(s) 176, 553, 1495, 1621, 1669
PfoI TCCNGGA 1 cut(s) 2148
PinAI ACCGGT 3 cut(s) 249, 905, 1404
PleI GAGTC 6 cut(s) 1209, 1696, 1823, 1919, 1954, 1970
PpsI GAGTC 6 cut(s) 1209, 1696, 1823, 1919, 1954, 1970
PpuMI RGGWCCY 2 cut(s) 273, 685
Psp124BI GAGCTC 1 cut(s) 1010
Psp5II RGGWCCY 2 cut(s) 273, 685
PspEI GGTNACC 1 cut(s) 775
PspPI GGNCC 9 cut(s) 151, 273, 334, 399, 685, 928, 1437, 1443, 1551
PspPPI RGGWCCY 2 cut(s) 273, 685
PstI CTGCAG 1 cut(s) 1945
PstNI CAGNNNCTG 3 cut(s) 604, 1513, 1949
PsuI RGATCY 2 cut(s) 323, 1564
PvuII CAGCTG 2 cut(s) 901, 1510
RseI CAYNNNNRTG 3 cut(s) 431, 1142, 1328
SacI GAGCTC 1 cut(s) 1010
SacII CCGCGG 1 cut(s) 157
SalI GTCGAC 1 cut(s) 1178
SaqAI TTAA 3 cut(s) 66, 1130, 2094
Sau3AI GATC 7 cut(s) 203, 323, 1258, 1427, 1564, 1987, 2221
Sau96I GGNCC 9 cut(s) 151, 273, 334, 399, 685, 928, 1437, 1443, 1551
SchI GAGTC 6 cut(s) 1210, 1697, 1823, 1919, 1955, 1970
SduI GDGCHC 4 cut(s) 1010, 1356, 1644, 1705
SexAI ACCWGGT 1 cut(s) 735
SfaNI GCATC 4 cut(s) 603, 1111, 1150, 1686
SfcI CTRYAG 2 cut(s) 596, 1941
Sfr303I CCGCGG 1 cut(s) 157
SgrBI CCGCGG 1 cut(s) 157
SinI GGWCC 6 cut(s) 151, 273, 399, 685, 928, 1437
SmaI CCCGGG 4 cut(s) 531, 974, 1435, 1922
SmiMI CAYNNNNRTG 3 cut(s) 431, 1142, 1328
SmlI CTYRAG 1 cut(s) 1877
SmoI CTYRAG 1 cut(s) 1877
Sse9I AATT 5 cut(s) 68, 88, 1209, 1541, 2132
SseBI AGGCCT 1 cut(s) 493
SspMI CTAG 7 cut(s) 257, 750, 789, 806, 860, 1046, 1184
SstI GAGCTC 1 cut(s) 1010
StuI AGGCCT 1 cut(s) 493
StyI CCWWGG 3 cut(s) 256, 565, 1296
TaaI ACNGT 5 cut(s) 349, 600, 744, 775, 1250
TaiI ACGT 1 cut(s) 1179
TaqII GACCGA 1 cut(s) 1194
TasI AATT 5 cut(s) 68, 88, 1209, 1541, 2132
TatI WGTACW 1 cut(s) 2025
TauI GCSGC 8 cut(s) 457, 518, 788, 805, 1286, 2111, 2180, 2183
TfiI GAWTC 5 cut(s) 176, 553, 1495, 1621, 1669
Tru1I TTAA 3 cut(s) 66, 1130, 2094
Tru9I TTAA 3 cut(s) 66, 1130, 2094
TscAI CASTG 5 cut(s) 12, 354, 1071, 1356, 1378
TseFI GTSAC 3 cut(s) 624, 775, 1273
Tsp45I GTSAC 3 cut(s) 624, 775, 1273
TspDTI ATGAA 8 cut(s) 426, 449, 1009, 1533, 1551, 1784, 2102, 2139
TspMI CCCGGG 4 cut(s) 529, 972, 1433, 1920
TspRI CASTG 5 cut(s) 12, 354, 1071, 1356, 1378
VpaK11BI GGWCC 6 cut(s) 151, 273, 399, 685, 928, 1437
XagI CCTNNNNNAGG 2 cut(s) 223, 1092
XapI RAATTY 4 cut(s) 68, 88, 1541, 2132
XceI RCATGY 2 cut(s) 454, 1141
XcmI CCANNNNNNNNNTGG 1 cut(s) 169
XmaI CCCGGG 4 cut(s) 529, 972, 1433, 1920
XmaJI CCTAGG 1 cut(s) 256
XmiI GTMKAC 2 cut(s) 447, 1179
XspI CTAG 7 cut(s) 257, 750, 789, 806, 860, 1046, 1184
ZraI GACGTC 1 cut(s) 1177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.