Rroxscaffold_7G00204320

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000087
Physical Location & Seq
Forward (+)
53500214 .. 53511215
11002 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00204320.1

Sequence Viewer

Length: 681 bp
ATGAGTCCATGGAACCGGTGGGCATTCGAAAAACCAACTCATTGCCTCGCCATCCGGCGTTTCGCCGAACGGGTAGTAAAGCGTTGCGTCATCAAATCCTTGTTACCTGTTACTTTCTTGAAGGTGTCCATGTGTACGAATGGATCTATTGAGCTGCCAAATTGGGCTATCTTGGGTGTTTTAGCATATGTGGGTCTAACGGTTTGCAAGATTACGGAGGTAAATGGACCAGGTCGTGCCGCAAAGAGCGGATTCTGTGCTAATAGTGGGGTGCCAACCTCGGCTCGAGCTGCCTTTCTTCTAGTTCCAGCATTTTTTCCAATATCAAGGCGGTGGCATCTACGGTCGGTCCGGGCATATGTTGGGTTGGTGCCGCGATCCGTTGTCGTGGTGCCGCATGTTTCCAATTCCCCTTTGTTGACCGGCCGAATGAATTATCATATTGCGGCCCAATCTCTCCGGCAAGTGAAGTATCTTCGTGGGGAGAAGTCAAAGGCTGGAGAAGGAGCGGGACTCCTTGAAGAAGAAGGTAGAGTCGCTAACTCCCAAGGTGACGAGCTGGAGGTGGCGGAGAAGAAGATTGCGGAGCTTGAGGGTGAACCGTCCGGGGCAAGGGATGAGTTGGGAAGTGCCCGGAATCCGCGAAAGAAGTCGAAGAATACGCCAAGTCATGGAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

226

Amino Acids

24.71

Weight (kDa)

10.11

Isoelectric Point (pI)

50.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 271, 370, 391
AccB7I CCANNNNNTGG 1 cut(s) 671
AccBSI CCGCTC 2 cut(s) 249, 509
AccII CGCG 2 cut(s) 376, 643
AclWI GGATC 2 cut(s) 151, 372
AcoI YGGCCR 1 cut(s) 424
AfaI GTAC 1 cut(s) 136
AfiI CCNNNNNNNGG 2 cut(s) 612, 671
AgeI ACCGGT 1 cut(s) 15
AgsI TTSAA 2 cut(s) 121, 521
AjnI CCWGG 1 cut(s) 229
AluBI AGCT 4 cut(s) 154, 290, 559, 589
AluI AGCT 4 cut(s) 154, 290, 559, 589
AlwI GGATC 2 cut(s) 151, 372
Ama87I CYCGRG 1 cut(s) 285
AoxI GGCC 2 cut(s) 424, 447
ApeKI GCWGC 2 cut(s) 154, 290
AsiGI ACCGGT 1 cut(s) 15
AspS9I GGNCC 3 cut(s) 227, 349, 448
AsuC2I CCSGG 3 cut(s) 353, 607, 634
AsuHPI GGTGA 2 cut(s) 563, 608
AsuII TTCGAA 1 cut(s) 27
AvaI CYCGRG 1 cut(s) 285
AvaII GGWCC 2 cut(s) 227, 349
BaeGI GKGCMC 1 cut(s) 634
BanI GGYRCC 3 cut(s) 271, 370, 391
BbvI GCAGC 2 cut(s) 141, 277
BccI CCATC 1 cut(s) 59
BciT130I CCWGG 1 cut(s) 231
BcnI CCSGG 3 cut(s) 353, 607, 634
BfaI CTAG 1 cut(s) 302
BisI GCNGC 6 cut(s) 155, 240, 291, 374, 395, 447
BlsI GCNGC 6 cut(s) 156, 241, 292, 375, 396, 448
Bme1390I CCNGG 4 cut(s) 231, 353, 607, 634
Bme18I GGWCC 2 cut(s) 227, 349
BmeT110I CYCGRG 1 cut(s) 285
BmgT120I GGNCC 3 cut(s) 227, 349, 448
BmiI GGNNCC 4 cut(s) 14, 273, 372, 393
BmrFI CCNGG 4 cut(s) 231, 353, 607, 634
BmsI GCATC 1 cut(s) 346
BplI GAGNNNNNCTC 2 cut(s) 498, 530
BpmI CTGGAG 2 cut(s) 519, 581
Bpu14I TTCGAA 1 cut(s) 27
BpuEI CTTGAG 1 cut(s) 611
BpuMI CCSGG 3 cut(s) 353, 607, 634
BsaJI CCNNGG 4 cut(s) 8, 279, 547, 606
BsaWI WCCGGW 1 cut(s) 15
Bsc4I CCNNNNNNNGG 2 cut(s) 612, 671
Bse118I RCCGGY 2 cut(s) 15, 422
Bse3DI GCAATG 1 cut(s) 40
BseBI CCWGG 1 cut(s) 231
BseDI CCNNGG 4 cut(s) 8, 279, 547, 606
BseGI GGATG 2 cut(s) 51, 622
BseLI CCNNNNNNNGG 2 cut(s) 612, 671
BseMI GCAATG 1 cut(s) 40
BseSI GKGCMC 1 cut(s) 634
BseX3I CGGCCG 1 cut(s) 424
BseXI GCAGC 2 cut(s) 141, 277
Bsh1236I CGCG 2 cut(s) 376, 643
Bsh1285I CGRYCG 2 cut(s) 347, 427
BshFI GGCC 2 cut(s) 426, 449
BshNI GGYRCC 3 cut(s) 271, 370, 391
BshTI ACCGGT 1 cut(s) 15
BsiEI CGRYCG 2 cut(s) 347, 427
BsiHKCI CYCGRG 1 cut(s) 285
BsiSI CCGG 7 cut(s) 16, 55, 352, 423, 460, 606, 634
BslFI GGGAC 1 cut(s) 525
BslI CCNNNNNNNGG 2 cut(s) 612, 671
BsmFI GGGAC 1 cut(s) 525
BsmI GAATGC 1 cut(s) 23
BsnI GGCC 2 cut(s) 426, 449
BsoBI CYCGRG 1 cut(s) 285
Bsp119I TTCGAA 1 cut(s) 27
Bsp1286I GDGCHC 1 cut(s) 634
Bsp143I GATC 2 cut(s) 143, 377
Bsp19I CCATGG 1 cut(s) 8
BspANI GGCC 2 cut(s) 426, 449
BspFNI CGCG 2 cut(s) 376, 643
BspLI GGNNCC 4 cut(s) 14, 273, 372, 393
BspPI GGATC 2 cut(s) 151, 372
BspT104I TTCGAA 1 cut(s) 27
BspT107I GGYRCC 3 cut(s) 271, 370, 391
BsrBI CCGCTC 2 cut(s) 249, 509
BsrDI GCAATG 1 cut(s) 40
BsrFI RCCGGY 2 cut(s) 15, 422
BssAI RCCGGY 2 cut(s) 15, 422
BssECI CCNNGG 4 cut(s) 8, 279, 547, 606
BssMI GATC 2 cut(s) 143, 377
BssT1I CCWWGG 2 cut(s) 8, 547
Bst2UI CCWGG 1 cut(s) 231
Bst4CI ACNGT 3 cut(s) 202, 345, 603
BstBI TTCGAA 1 cut(s) 27
BstDSI CCRYGG 1 cut(s) 8
BstF5I GGATG 2 cut(s) 51, 622
BstFNI CGCG 2 cut(s) 376, 643
BstKTI GATC 2 cut(s) 146, 380
BstMBI GATC 2 cut(s) 143, 377
BstMCI CGRYCG 2 cut(s) 347, 427
BstMWI GCNNNNNNNGC 1 cut(s) 290
BstNI CCWGG 1 cut(s) 231
BstNSI RCATGY 1 cut(s) 401
BstSCI CCNGG 4 cut(s) 229, 351, 605, 632
BstSLI GKGCMC 1 cut(s) 634
BstUI CGCG 2 cut(s) 376, 643
BstV1I GCAGC 2 cut(s) 141, 277
BstX2I RGATCY 1 cut(s) 143
BstYI RGATCY 1 cut(s) 143
BstZI CGGCCG 1 cut(s) 424
BsuRI GGCC 2 cut(s) 426, 449
BtgI CCRYGG 1 cut(s) 8
BtsCI GGATG 2 cut(s) 51, 622
Cfr10I RCCGGY 2 cut(s) 15, 422
Cfr13I GGNCC 3 cut(s) 227, 349, 448
CpoI CGGWCCG 1 cut(s) 349
CseI GACGC 1 cut(s) 76
CsiI ACCWGGT 1 cut(s) 229
Csp6I GTAC 1 cut(s) 135
CspAI ACCGGT 1 cut(s) 15
CspI CGGWCCG 1 cut(s) 349
CviAII CATG 4 cut(s) 9, 130, 398, 671
CviJI RGCY 9 cut(s) 154, 167, 284, 290, 426, 449, 497, 559, 589
CviKI_1 RGCY 9 cut(s) 154, 167, 284, 290, 426, 449, 497, 559, 589
CviQI GTAC 1 cut(s) 135
DpnI GATC 2 cut(s) 145, 379
DpnII GATC 2 cut(s) 143, 377
EaeI YGGCCR 1 cut(s) 424
EagI CGGCCG 1 cut(s) 424
EciI GGCGGA 1 cut(s) 584
EclXI CGGCCG 1 cut(s) 424
Eco130I CCWWGG 2 cut(s) 8, 547
Eco47I GGWCC 2 cut(s) 227, 349
Eco52I CGGCCG 1 cut(s) 424
Eco88I CYCGRG 1 cut(s) 285
EcoRII CCWGG 1 cut(s) 229
EcoT14I CCWWGG 2 cut(s) 8, 547
ErhI CCWWGG 2 cut(s) 8, 547
FaeI CATG 4 cut(s) 12, 133, 401, 674
FaiI YATR 9 cut(s) 10, 131, 187, 189, 358, 360, 399, 441, 672
FaqI GGGAC 1 cut(s) 525
FatI CATG 4 cut(s) 8, 129, 397, 670
FauI CCCGC 1 cut(s) 502
FauNDI CATATG 2 cut(s) 187, 358
Fnu4HI GCNGC 6 cut(s) 155, 240, 291, 374, 395, 447
FokI GGATG 2 cut(s) 38, 629
Fsp4HI GCNGC 6 cut(s) 155, 240, 291, 374, 395, 447
FspBI CTAG 1 cut(s) 302
GluI GCNGC 6 cut(s) 155, 240, 291, 374, 395, 447
GsuI CTGGAG 2 cut(s) 519, 581
HaeIII GGCC 2 cut(s) 426, 449
HapII CCGG 7 cut(s) 16, 55, 352, 423, 460, 606, 634
HgaI GACGC 1 cut(s) 76
Hin1II CATG 4 cut(s) 12, 133, 401, 674
HincII GTYRAC 1 cut(s) 420
HindII GTYRAC 1 cut(s) 420
HinfI GANTC 5 cut(s) 4, 252, 513, 534, 637
HpaII CCGG 7 cut(s) 16, 55, 352, 423, 460, 606, 634
HphI GGTGA 2 cut(s) 563, 608
Hpy166II GTNNAC 3 cut(s) 135, 420, 599
Hpy188III TCNNGA 1 cut(s) 118
Hpy8I GTNNAC 3 cut(s) 135, 420, 599
HpyAV CCTTC 4 cut(s) 115, 497, 521, 669
HpyCH4III ACNGT 3 cut(s) 202, 345, 603
HpyCH4V TGCA 1 cut(s) 207
HpyF10VI GCNNNNNNNGC 1 cut(s) 290
Hsp92II CATG 4 cut(s) 12, 133, 401, 674
Kzo9I GATC 2 cut(s) 143, 377
LmnI GCTCC 2 cut(s) 506, 586
Lsp1109I GCAGC 2 cut(s) 141, 277
LweI GCATC 1 cut(s) 346
MabI ACCWGGT 1 cut(s) 229
MaeI CTAG 1 cut(s) 302
MaeIII GTNAC 3 cut(s) 102, 109, 551
MalI GATC 2 cut(s) 145, 379
MbiI CCGCTC 2 cut(s) 249, 509
MboI GATC 2 cut(s) 143, 377
MboII GAAGA 7 cut(s) 290, 467, 533, 536, 586, 589, 667
MflI RGATCY 1 cut(s) 143
MhlI GDGCHC 1 cut(s) 634
MluCI AATT 3 cut(s) 160, 406, 433
MlyI GAGTC 3 cut(s) 13, 507, 543
MnlI CCTC 5 cut(s) 56, 211, 289, 556, 586
MspI CCGG 7 cut(s) 16, 55, 352, 423, 460, 606, 634
MspR9I CCNGG 4 cut(s) 231, 353, 607, 634
Mva1269I GAATGC 1 cut(s) 23
MvaI CCWGG 1 cut(s) 231
MvnI CGCG 2 cut(s) 376, 643
MwoI GCNNNNNNNGC 1 cut(s) 290
NciI CCSGG 3 cut(s) 353, 607, 634
NcoI CCATGG 1 cut(s) 8
NdeI CATATG 2 cut(s) 187, 358
NdeII GATC 2 cut(s) 143, 377
NlaIII CATG 4 cut(s) 12, 133, 401, 674
NlaIV GGNNCC 4 cut(s) 14, 273, 372, 393
NmeAIII GCCGAG 1 cut(s) 260
NmuCI GTSAC 1 cut(s) 551
NspI RCATGY 1 cut(s) 401
NspV TTCGAA 1 cut(s) 27
PaeR7I CTCGAG 1 cut(s) 285
PctI GAATGC 1 cut(s) 23
PfeI GAWTC 2 cut(s) 252, 637
PflFI GACNNNGTC 1 cut(s) 231
PflMI CCANNNNNTGG 1 cut(s) 671
PinAI ACCGGT 1 cut(s) 15
PkrI GCNGC 6 cut(s) 156, 241, 292, 375, 396, 448
PleI GAGTC 3 cut(s) 12, 507, 542
PpsI GAGTC 3 cut(s) 12, 507, 542
Psp6I CCWGG 1 cut(s) 229
PspGI CCWGG 1 cut(s) 229
PspN4I GGNNCC 4 cut(s) 14, 273, 372, 393
PspPI GGNCC 3 cut(s) 227, 349, 448
PspXI VCTCGAGB 1 cut(s) 285
PsuI RGATCY 1 cut(s) 143
PsyI GACNNNGTC 1 cut(s) 231
RsaI GTAC 1 cut(s) 136
RsaNI GTAC 1 cut(s) 135
Rsr2I CGGWCCG 1 cut(s) 349
RsrII CGGWCCG 1 cut(s) 349
SatI GCNGC 6 cut(s) 155, 240, 291, 374, 395, 447
Sau3AI GATC 2 cut(s) 143, 377
Sau96I GGNCC 3 cut(s) 227, 349, 448
SchI GAGTC 3 cut(s) 13, 507, 543
ScrFI CCNGG 4 cut(s) 231, 353, 607, 634
SduI GDGCHC 1 cut(s) 634
SexAI ACCWGGT 1 cut(s) 229
SfaNI GCATC 1 cut(s) 346
Sfr274I CTCGAG 1 cut(s) 285
SfuI TTCGAA 1 cut(s) 27
SinI GGWCC 2 cut(s) 227, 349
SlaI CTCGAG 1 cut(s) 285
SmlI CTYRAG 2 cut(s) 285, 590
SmoI CTYRAG 2 cut(s) 285, 590
Sse9I AATT 3 cut(s) 160, 406, 433
SspMI CTAG 1 cut(s) 302
StyD4I CCNGG 4 cut(s) 229, 351, 605, 632
StyI CCWWGG 2 cut(s) 8, 547
TaaI ACNGT 3 cut(s) 202, 345, 603
TaqI TCGA 3 cut(s) 27, 286, 653
TaqII GACCGA 1 cut(s) 337
TasI AATT 3 cut(s) 160, 406, 433
TauI GCSGC 4 cut(s) 242, 376, 397, 449
TfiI GAWTC 2 cut(s) 252, 637
TseFI GTSAC 1 cut(s) 551
TseI GCWGC 2 cut(s) 154, 290
Tsp45I GTSAC 1 cut(s) 551
TspDTI ATGAA 1 cut(s) 446
TspGWI ACGGA 2 cut(s) 230, 370
Tth111I GACNNNGTC 1 cut(s) 231
Van91I CCANNNNNTGG 1 cut(s) 671
VpaK11BI GGWCC 2 cut(s) 227, 349
XceI RCATGY 1 cut(s) 401
XcmI CCANNNNNNNNNTGG 1 cut(s) 15
XhoI CTCGAG 1 cut(s) 285
XspI CTAG 1 cut(s) 302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.