Rmu_sc0019655.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0019655.1
OG0000087
Physical Location & Seq
Forward (+)
1 .. 928
928 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0019655.1_g000001.1.cds

Sequence Viewer

Length: 864 bp
cggtccattgaagaaacccttctggagatcaccgatgagggatacggtgagcctgaccccgacgctcccgtgacccaagtctcgcagccctccctggccgatgttctcacgatagatgacaccgggatgggaaaagtaccggccccagtgcctatttcctctcgttctactgggagcgacgaggtattactccccggtgagaagaagagatcccataggcaccgtcatcagactgataaggaggtgacgtatactggccgggatgtccaaaggactggtgcgaagaggcagaagaaagatcacccgggaccagagtcgtcgccttctcttggcctgttgtctcccgccattccggtaatccccaagaagcccatcaagcagctgctgagtgagtacggggttaccgatgaaaagttcgtatggtccatgctgggggacctgaaggatattcacctcgaccgggttcgggccaaggataaccctccccaggagaatcgccgtctcgcccgggaatcaatgatgtgggcactcttcaatgtgtacgccattgacgccagcaaggaagatattcatctgaatgaggaggttagcaatctctccgggcaagtgaagtatcttcatggcgagaaggtcaagctggagaaggagcgggactcactgagggctgagatggccaccgctaagcagcagattgcggagcttgagggtgaggtgactaaggcgcgggaagaagtaaaaaacgcccgggactctgagaaaaaggctgcagaatctgccgtctcatggaaggagaaggcagaccacctggagggtagccttcccgcggagaggcacgaggccgtggaggagtacaagtcctcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

287

Amino Acids

32.07

Weight (kDa)

5.61

Isoelectric Point (pI)

46.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 219
AccBSI CCGCTC 1 cut(s) 649
AccI GTMKAC 1 cut(s) 251
AccII CGCG 2 cut(s) 724, 824
AciI CCGC 7 cut(s) 345, 649, 678, 695, 724, 822, 824
AclWI GGATC 1 cut(s) 204
AcoI YGGCCR 3 cut(s) 96, 256, 672
AcuI CTGAAG 1 cut(s) 461
AcyI GRCGYC 1 cut(s) 552
AfaI GTAC 4 cut(s) 138, 395, 542, 851
AfiI CCNNNNNNNGG 9 cut(s) 329, 432, 460, 466, 487, 783, 808, 823, 828
AgsI TTSAA 2 cut(s) 11, 535
AjnI CCWGG 3 cut(s) 93, 486, 804
AluBI AGCT 3 cut(s) 382, 637, 700
AluI AGCT 3 cut(s) 382, 637, 700
Alw26I GTCTC 4 cut(s) 85, 345, 506, 784
AlwI GGATC 1 cut(s) 204
AlwNI CAGNNNCTG 2 cut(s) 385, 773
Ama87I CYCGRG 3 cut(s) 304, 507, 744
AoxI GGCC 7 cut(s) 96, 141, 256, 331, 468, 672, 837
ApeKI GCWGC 5 cut(s) 85, 379, 382, 685, 764
Asp700I GAANNNNTTC 2 cut(s) 18, 567
AspLEI GCGC 1 cut(s) 724
AspS9I GGNCC 6 cut(s) 3, 142, 308, 423, 436, 468
AsuHPI GGTGA 8 cut(s) 22, 59, 209, 256, 293, 443, 719, 724
AvaI CYCGRG 3 cut(s) 304, 507, 744
AvaII GGWCC 4 cut(s) 3, 308, 423, 436
BaeGI GKGCMC 1 cut(s) 529
BalI TGGCCA 1 cut(s) 674
BanI GGYRCC 1 cut(s) 219
BauI CACGAG 1 cut(s) 833
BbvI GCAGC 5 cut(s) 97, 369, 391, 697, 751
BccI CCATC 3 cut(s) 121, 380, 664
BceAI ACGGC 3 cut(s) 483, 761, 824
BciT130I CCWGG 3 cut(s) 95, 488, 806
BciVI GTATCC 1 cut(s) 35
BcoDI GTCTC 4 cut(s) 85, 345, 506, 784
BfmI CTRYAG 1 cut(s) 765
BfuI GTATCC 1 cut(s) 35
BisI GCNGC 5 cut(s) 86, 380, 383, 686, 765
BlpI GCTNAGC 1 cut(s) 681
BlsI GCNGC 5 cut(s) 87, 381, 384, 687, 766
Bme18I GGWCC 4 cut(s) 3, 308, 423, 436
BmeT110I CYCGRG 3 cut(s) 304, 507, 744
BmgT120I GGNCC 6 cut(s) 3, 142, 308, 423, 436, 468
BmiI GGNNCC 4 cut(s) 144, 221, 309, 437
BmrI ACTGGG 2 cut(s) 140, 180
BmuI ACTGGG 2 cut(s) 140, 180
BoxI GACNNNNGTC 2 cut(s) 77, 313
BplI GAGNNNNNCTC 2 cut(s) 638, 670
BpmI CTGGAG 3 cut(s) 44, 659, 827
Bpu1102I GCTNAGC 1 cut(s) 681
BpuEI CTTGAG 1 cut(s) 722
BsaBI GATNNNNATC 1 cut(s) 570
BsaHI GRCGYC 1 cut(s) 552
BsaJI CCNNGG 9 cut(s) 93, 193, 304, 471, 486, 507, 744, 822, 840
BsaWI WCCGGW 1 cut(s) 352
BsaXI ACNNNNNCTCC 3 cut(s) 233, 263, 839
Bsc4I CCNNNNNNNGG 9 cut(s) 329, 432, 460, 466, 487, 783, 808, 823, 828
Bse118I RCCGGY 1 cut(s) 139
Bse1I ACTGG 4 cut(s) 146, 175, 259, 280
Bse8I GATNNNNATC 1 cut(s) 570
BseBI CCWGG 3 cut(s) 95, 488, 806
BseDI CCNNGG 9 cut(s) 93, 193, 304, 471, 486, 507, 744, 822, 840
BseGI GGATG 2 cut(s) 132, 268
BseJI GATNNNNATC 1 cut(s) 570
BseLI CCNNNNNNNGG 9 cut(s) 329, 432, 460, 466, 487, 783, 808, 823, 828
BseMII CTCAG 4 cut(s) 377, 650, 657, 744
BseNI ACTGG 4 cut(s) 146, 175, 259, 280
BseRI GAGGAG 2 cut(s) 596, 860
BseSI GKGCMC 1 cut(s) 529
BseXI GCAGC 5 cut(s) 97, 369, 391, 697, 751
BseYI CCCAGC 1 cut(s) 430
Bsh1236I CGCG 2 cut(s) 724, 824
Bsh1285I CGRYCG 1 cut(s) 460
BshFI GGCC 7 cut(s) 98, 143, 258, 333, 470, 674, 839
BshNI GGYRCC 1 cut(s) 219
BsiEI CGRYCG 1 cut(s) 460
BsiHKCI CYCGRG 3 cut(s) 304, 507, 744
BslFI GGGAC 4 cut(s) 321, 449, 665, 761
BslI CCNNNNNNNGG 9 cut(s) 329, 432, 460, 466, 487, 783, 808, 823, 828
BsmAI GTCTC 4 cut(s) 85, 345, 506, 784
BsmBI CGTCTC 2 cut(s) 506, 784
BsmFI GGGAC 4 cut(s) 321, 449, 665, 761
BsnI GGCC 7 cut(s) 98, 143, 258, 333, 470, 674, 839
BsoBI CYCGRG 3 cut(s) 304, 507, 744
Bsp1286I GDGCHC 1 cut(s) 529
Bsp143I GATC 3 cut(s) 27, 209, 298
Bsp1720I GCTNAGC 1 cut(s) 681
BspACI CCGC 7 cut(s) 345, 649, 678, 695, 724, 822, 824
BspANI GGCC 7 cut(s) 98, 143, 258, 333, 470, 674, 839
BspCNI CTCAG 4 cut(s) 378, 651, 658, 745
BspFNI CGCG 2 cut(s) 724, 824
BspLI GGNNCC 4 cut(s) 144, 221, 309, 437
BspMAI CTGCAG 1 cut(s) 769
BspPI GGATC 1 cut(s) 204
BspT107I GGYRCC 1 cut(s) 219
BsrBI CCGCTC 1 cut(s) 649
BsrFI RCCGGY 1 cut(s) 139
BsrI ACTGG 4 cut(s) 146, 175, 259, 280
BssAI RCCGGY 1 cut(s) 139
BssECI CCNNGG 9 cut(s) 93, 193, 304, 471, 486, 507, 744, 822, 840
BssMI GATC 3 cut(s) 27, 209, 298
BssNAI GTATAC 1 cut(s) 252
BssNI GRCGYC 1 cut(s) 552
BssSI CACGAG 1 cut(s) 833
BssT1I CCWWGG 1 cut(s) 471
Bst1107I GTATAC 1 cut(s) 252
Bst2BI CACGAG 1 cut(s) 833
Bst2UI CCWGG 3 cut(s) 95, 488, 806
Bst4CI ACNGT 2 cut(s) 47, 224
Bst6I CTCTTC 3 cut(s) 200, 278, 536
BstACI GRCGYC 1 cut(s) 552
BstAPI GCANNNNNTGC 1 cut(s) 773
BstC8I GCNNGC 1 cut(s) 556
BstDEI CTNAG 6 cut(s) 386, 659, 666, 681, 717, 753
BstDSI CCRYGG 2 cut(s) 822, 840
BstEII GGTNACC 1 cut(s) 400
BstF5I GGATG 2 cut(s) 132, 268
BstFNI CGCG 2 cut(s) 724, 824
BstHHI GCGC 1 cut(s) 724
BstKTI GATC 3 cut(s) 30, 212, 301
BstMAI GTCTC 4 cut(s) 85, 345, 506, 784
BstMBI GATC 3 cut(s) 27, 209, 298
BstMCI CGRYCG 1 cut(s) 460
BstMWI GCNNNNNNNGC 4 cut(s) 376, 551, 671, 773
BstNI CCWGG 3 cut(s) 95, 488, 806
BstPAI GACNNNNGTC 2 cut(s) 77, 313
BstPI GGTNACC 1 cut(s) 400
BstSFI CTRYAG 1 cut(s) 765
BstSLI GKGCMC 1 cut(s) 529
BstUI CGCG 2 cut(s) 724, 824
BstV1I GCAGC 5 cut(s) 97, 369, 391, 697, 751
BstX2I RGATCY 1 cut(s) 209
BstXI CCANNNNNNTGG 1 cut(s) 275
BstYI RGATCY 1 cut(s) 209
BstZ17I GTATAC 1 cut(s) 252
BsuI GTATCC 1 cut(s) 35
BsuRI GGCC 7 cut(s) 98, 143, 258, 333, 470, 674, 839
BtgI CCRYGG 2 cut(s) 822, 840
BtsCI GGATG 2 cut(s) 132, 268
BtsIMutI CAGTG 2 cut(s) 153, 656
Cac8I GCNNGC 1 cut(s) 556
CaiI CAGNNNCTG 2 cut(s) 385, 773
CfoI GCGC 1 cut(s) 724
Cfr10I RCCGGY 1 cut(s) 139
Cfr13I GGNCC 6 cut(s) 3, 142, 308, 423, 436, 468
Cfr42I CCGCGG 1 cut(s) 825
Cfr9I CCCGGG 3 cut(s) 304, 507, 744
CseI GACGC 2 cut(s) 71, 560
Csp6I GTAC 4 cut(s) 137, 394, 541, 850
CviAII CATG 3 cut(s) 427, 620, 783
CviQI GTAC 4 cut(s) 137, 394, 541, 850
DdeI CTNAG 6 cut(s) 386, 659, 666, 681, 717, 753
DpnI GATC 3 cut(s) 29, 211, 300
DpnII GATC 3 cut(s) 27, 209, 298
EaeI YGGCCR 3 cut(s) 96, 256, 672
Eam1104I CTCTTC 3 cut(s) 200, 278, 536
EarI CTCTTC 3 cut(s) 200, 278, 536
Eco130I CCWWGG 1 cut(s) 471
Eco47I GGWCC 4 cut(s) 3, 308, 423, 436
Eco57I CTGAAG 1 cut(s) 461
Eco88I CYCGRG 3 cut(s) 304, 507, 744
Eco91I GGTNACC 1 cut(s) 400
EcoO109I RGGNCCY 1 cut(s) 436
EcoO65I GGTNACC 1 cut(s) 400
EcoRII CCWGG 3 cut(s) 93, 486, 804
EcoT14I CCWWGG 1 cut(s) 471
ErhI CCWWGG 1 cut(s) 471
Esp3I CGTCTC 2 cut(s) 506, 784
FaeI CATG 3 cut(s) 430, 623, 786
FaiI YATR 6 cut(s) 216, 252, 421, 428, 621, 784
FalI AAGNNNNNCTT 1 cut(s) 35
FaqI GGGAC 4 cut(s) 321, 449, 665, 761
FatI CATG 3 cut(s) 426, 619, 782
FauI CCCGC 4 cut(s) 352, 642, 717, 829
FblI GTMKAC 1 cut(s) 251
Fnu4HI GCNGC 5 cut(s) 86, 380, 383, 686, 765
FokI GGATG 2 cut(s) 139, 275
Fsp4HI GCNGC 5 cut(s) 86, 380, 383, 686, 765
GlaI GCGC 1 cut(s) 723
GluI GCNGC 5 cut(s) 86, 380, 383, 686, 765
GsaI CCCAGC 1 cut(s) 434
GsuI CTGGAG 3 cut(s) 44, 659, 827
HaeIII GGCC 7 cut(s) 98, 143, 258, 333, 470, 674, 839
HgaI GACGC 2 cut(s) 71, 560
HhaI GCGC 1 cut(s) 724
Hin1I GRCGYC 1 cut(s) 552
Hin1II CATG 3 cut(s) 430, 623, 786
Hin6I GCGC 1 cut(s) 722
HinP1I GCGC 1 cut(s) 722
HinfI GANTC 6 cut(s) 314, 493, 512, 653, 749, 770
HphI GGTGA 8 cut(s) 22, 59, 209, 256, 293, 443, 719, 724
Hpy166II GTNNAC 2 cut(s) 252, 541
Hpy188I TCNGA 3 cut(s) 231, 576, 754
Hpy188III TCNNGA 2 cut(s) 23, 109
Hpy8I GTNNAC 2 cut(s) 252, 541
Hpy99I CGWCG 3 cut(s) 65, 182, 322
HpyAV CCTTC 8 cut(s) 29, 333, 436, 622, 637, 781, 787, 827
HpyCH4III ACNGT 2 cut(s) 47, 224
HpyCH4IV ACGT 1 cut(s) 248
HpyCH4V TGCA 1 cut(s) 767
HpyF10VI GCNNNNNNNGC 4 cut(s) 376, 551, 671, 773
HpyF3I CTNAG 6 cut(s) 386, 659, 666, 681, 717, 753
HpySE526I ACGT 1 cut(s) 248
Hsp92I GRCGYC 1 cut(s) 552
Hsp92II CATG 3 cut(s) 430, 623, 786
HspAI GCGC 1 cut(s) 722
KspI CCGCGG 1 cut(s) 825
Kzo9I GATC 3 cut(s) 27, 209, 298
LmnI GCTCC 4 cut(s) 70, 174, 646, 697
Lsp1109I GCAGC 5 cut(s) 97, 369, 391, 697, 751
MaeII ACGT 1 cut(s) 248
MaeIII GTNAC 4 cut(s) 70, 244, 400, 712
MalI GATC 3 cut(s) 29, 211, 300
MbiI CCGCTC 1 cut(s) 649
MboI GATC 3 cut(s) 27, 209, 298
MboII GAAGA 9 cut(s) 23, 214, 217, 295, 304, 523, 575, 608, 740
MflI RGATCY 1 cut(s) 209
MhlI GDGCHC 1 cut(s) 529
MlsI TGGCCA 1 cut(s) 674
MluNI TGGCCA 1 cut(s) 674
MlyI GAGTC 3 cut(s) 323, 647, 743
Mox20I TGGCCA 1 cut(s) 674
MroXI GAANNNNTTC 2 cut(s) 18, 567
MscI TGGCCA 1 cut(s) 674
MseI TTAA 1 cut(s) 862
MslI CAYNNNNRTG 2 cut(s) 125, 576
Msp20I TGGCCA 1 cut(s) 674
MspA1I CMGCKG 2 cut(s) 382, 824
MvaI CCWGG 3 cut(s) 95, 488, 806
MvnI CGCG 2 cut(s) 724, 824
MwoI GCNNNNNNNGC 4 cut(s) 376, 551, 671, 773
NdeII GATC 3 cut(s) 27, 209, 298
NlaIII CATG 3 cut(s) 430, 623, 786
NlaIV GGNNCC 4 cut(s) 144, 221, 309, 437
NmuCI GTSAC 3 cut(s) 70, 244, 712
PcsI WCGNNNNNNNCGW 1 cut(s) 402
PdmI GAANNNNTTC 2 cut(s) 18, 567
PfeI GAWTC 3 cut(s) 493, 512, 770
PkrI GCNGC 5 cut(s) 87, 381, 384, 687, 766
PleI GAGTC 3 cut(s) 322, 647, 743
PpsI GAGTC 3 cut(s) 322, 647, 743
PpuMI RGGWCCY 1 cut(s) 436
PshAI GACNNNNGTC 2 cut(s) 77, 313
Psp5II RGGWCCY 1 cut(s) 436
Psp6I CCWGG 3 cut(s) 93, 486, 804
PspEI GGTNACC 1 cut(s) 400
PspFI CCCAGC 1 cut(s) 430
PspGI CCWGG 3 cut(s) 93, 486, 804
PspN4I GGNNCC 4 cut(s) 144, 221, 309, 437
PspPI GGNCC 6 cut(s) 3, 142, 308, 423, 436, 468
PspPPI RGGWCCY 1 cut(s) 436
PstI CTGCAG 1 cut(s) 769
PstNI CAGNNNCTG 2 cut(s) 385, 773
PsuI RGATCY 1 cut(s) 209
PvuII CAGCTG 1 cut(s) 382
RsaI GTAC 4 cut(s) 138, 395, 542, 851
RsaNI GTAC 4 cut(s) 137, 394, 541, 850
RseI CAYNNNNRTG 2 cut(s) 125, 576
SacII CCGCGG 1 cut(s) 825
SaqAI TTAA 1 cut(s) 862
SatI GCNGC 5 cut(s) 86, 380, 383, 686, 765
Sau3AI GATC 3 cut(s) 27, 209, 298
Sau96I GGNCC 6 cut(s) 3, 142, 308, 423, 436, 468
SchI GAGTC 3 cut(s) 323, 647, 743
SduI GDGCHC 1 cut(s) 529
SfcI CTRYAG 1 cut(s) 765
Sfr303I CCGCGG 1 cut(s) 825
SgrBI CCGCGG 1 cut(s) 825
SinI GGWCC 4 cut(s) 3, 308, 423, 436
SmaI CCCGGG 3 cut(s) 306, 509, 746
SmiMI CAYNNNNRTG 2 cut(s) 125, 576
SmlI CTYRAG 1 cut(s) 701
SmoI CTYRAG 1 cut(s) 701
SsiI CCGC 7 cut(s) 345, 649, 678, 695, 724, 822, 824
StyI CCWWGG 1 cut(s) 471
TaaI ACNGT 2 cut(s) 47, 224
TaiI ACGT 1 cut(s) 251
TaqI TCGA 1 cut(s) 456
TatI WGTACW 1 cut(s) 849
TfiI GAWTC 3 cut(s) 493, 512, 770
Tru1I TTAA 1 cut(s) 862
Tru9I TTAA 1 cut(s) 862
TscAI CASTG 2 cut(s) 153, 663
TseFI GTSAC 3 cut(s) 70, 244, 712
TseI GCWGC 5 cut(s) 85, 379, 382, 685, 764
Tsp45I GTSAC 3 cut(s) 70, 244, 712
TspDTI ATGAA 3 cut(s) 423, 560, 608
TspMI CCCGGG 3 cut(s) 304, 507, 744
TspRI CASTG 2 cut(s) 153, 663
VpaK11BI GGWCC 4 cut(s) 3, 308, 423, 436
XmaI CCCGGG 3 cut(s) 304, 507, 744
XmiI GTMKAC 1 cut(s) 251
XmnI GAANNNNTTC 2 cut(s) 18, 567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.