Rmu_sc0002669.1_g000034

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002669.1
OG0000087
Physical Location & Seq
Forward (+)
187061 .. 187990
930 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002669.1_g000034.1.cds

Sequence Viewer

Length: 645 bp
atggaatcagaagccaggggtggggataagggatcgtcgtaccagtcttctgccaggcaagctgaagtggacatcgaccggtacctaggccgggtagaccaattagcggagaacacggggtcctcgactggggtgttctcagagagtagtggggagtccgacgagggtgggtctgcggaggccccggtagtcacagtggccattcccgagggcattcctaagccgaggtacacacttgcggacgggaccgtatgcgacgaacctgggagaagcatgacgatgaagaagatcgtagacatgcggctgaagtgggggataccggacgcagtagagcttaggcctcttagggatggggagatggccgcgaatcttgccccggggtgggtggcgctgcacgagaatcagctctaccaagggttatcgctacccttgccccggtgcctacagtatctgctgcggatgctgaacctgtcaccggggcagctgaccccgaatgcagttcgccaaatatatagtatgatggccatgtgggacctgtgccagcaagggtggccttccataaatgagttccgcggtacaccggtgaaagccccgaagaggaaaccccggaaaggcaaggaggaggacaagatggatgatgcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

214

Amino Acids

23.51

Weight (kDa)

5.23

Isoelectric Point (pI)

34.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 81
AccB1I GGYRCC 2 cut(s) 81, 438
AccI GTMKAC 2 cut(s) 96, 294
AccII CGCG 2 cut(s) 365, 573
AciI CCGC 8 cut(s) 107, 176, 239, 301, 363, 457, 571, 573
AclWI GGATC 1 cut(s) 40
AcoI YGGCCR 3 cut(s) 198, 360, 522
AcuI CTGAAG 2 cut(s) 84, 326
AfaI GTAC 4 cut(s) 41, 83, 230, 577
AgeI ACCGGT 2 cut(s) 78, 580
AjnI CCWGG 3 cut(s) 14, 53, 262
AloI GAACNNNNNNTCC 2 cut(s) 104, 136
AluBI AGCT 4 cut(s) 62, 334, 406, 484
AluI AGCT 4 cut(s) 62, 334, 406, 484
AlwI GGATC 1 cut(s) 40
AlwNI CAGNNNCTG 1 cut(s) 451
Ama87I CYCGRG 2 cut(s) 206, 376
AoxI GGCC 7 cut(s) 88, 180, 198, 338, 360, 522, 551
ApeKI GCWGC 3 cut(s) 391, 454, 481
AsiGI ACCGGT 2 cut(s) 78, 580
Asp718I GGTACC 1 cut(s) 81
AspA2I CCTAGG 1 cut(s) 85
AspLEI GCGC 1 cut(s) 391
AspS9I GGNCC 4 cut(s) 120, 181, 246, 532
AsuC2I CCSGG 7 cut(s) 92, 185, 377, 378, 436, 477, 607
AsuHPI GGTGA 2 cut(s) 465, 595
AvaI CYCGRG 2 cut(s) 206, 376
AvaII GGWCC 3 cut(s) 120, 246, 532
AvrII CCTAGG 1 cut(s) 85
BaeI ACNNNNGTAYC 2 cut(s) 567, 600
BalI TGGCCA 2 cut(s) 200, 524
BanI GGYRCC 2 cut(s) 81, 438
BauI CACGAG 1 cut(s) 395
BbsI GAAGAC 1 cut(s) 39
BbvI GCAGC 3 cut(s) 378, 441, 493
BccI CCATC 4 cut(s) 344, 352, 514, 625
BciT130I CCWGG 3 cut(s) 16, 55, 264
BciVI GTATCC 1 cut(s) 309
BcnI CCSGG 7 cut(s) 92, 185, 377, 378, 436, 477, 607
BfaI CTAG 1 cut(s) 86
BfmI CTRYAG 1 cut(s) 443
BfoI RGCGCY 1 cut(s) 392
BfuI GTATCC 1 cut(s) 309
BisI GCNGC 5 cut(s) 302, 363, 392, 455, 482
BlnI CCTAGG 1 cut(s) 85
BlsI GCNGC 5 cut(s) 303, 364, 393, 456, 483
Bme18I GGWCC 3 cut(s) 120, 246, 532
BmeT110I CYCGRG 2 cut(s) 206, 376
BmgT120I GGNCC 4 cut(s) 120, 181, 246, 532
BmiI GGNNCC 6 cut(s) 83, 121, 183, 247, 440, 533
BmrI ACTGGG 1 cut(s) 138
BmsI GCATC 2 cut(s) 450, 628
BmuI ACTGGG 1 cut(s) 138
BpiI GAAGAC 1 cut(s) 39
Bpu10I CCTNAGC 2 cut(s) 219, 335
BpuMI CCSGG 7 cut(s) 92, 185, 377, 378, 436, 477, 607
BsaWI WCCGGW 3 cut(s) 78, 319, 580
Bse118I RCCGGY 2 cut(s) 78, 580
Bse1I ACTGG 2 cut(s) 43, 133
BseBI CCWGG 3 cut(s) 16, 55, 264
BseGI GGATG 3 cut(s) 355, 465, 640
BseMII CTCAG 1 cut(s) 153
BseNI ACTGG 2 cut(s) 43, 133
BseRI GAGGAG 1 cut(s) 635
BseXI GCAGC 3 cut(s) 378, 441, 493
BsgI GTGCAG 1 cut(s) 377
Bsh1236I CGCG 2 cut(s) 365, 573
Bsh1285I CGRYCG 1 cut(s) 79
BshFI GGCC 7 cut(s) 90, 182, 200, 340, 362, 524, 553
BshNI GGYRCC 2 cut(s) 81, 438
BshTI ACCGGT 2 cut(s) 78, 580
BsiEI CGRYCG 1 cut(s) 79
BsiHKCI CYCGRG 2 cut(s) 206, 376
BsiSI CCGG 9 cut(s) 79, 91, 185, 320, 377, 436, 476, 581, 607
BslFI GGGAC 2 cut(s) 259, 545
BsmFI GGGAC 2 cut(s) 259, 545
BsmI GAATGC 2 cut(s) 213, 499
BsnI GGCC 7 cut(s) 90, 182, 200, 340, 362, 524, 553
BsoBI CYCGRG 2 cut(s) 206, 376
Bsp143I GATC 2 cut(s) 32, 288
BspACI CCGC 8 cut(s) 107, 176, 239, 301, 363, 457, 571, 573
BspANI GGCC 7 cut(s) 90, 182, 200, 340, 362, 524, 553
BspCNI CTCAG 1 cut(s) 152
BspFNI CGCG 2 cut(s) 365, 573
BspLI GGNNCC 6 cut(s) 83, 121, 183, 247, 440, 533
BspPI GGATC 1 cut(s) 40
BspT107I GGYRCC 2 cut(s) 81, 438
BsrFI RCCGGY 2 cut(s) 78, 580
BsrI ACTGG 2 cut(s) 43, 133
BssAI RCCGGY 2 cut(s) 78, 580
BssMI GATC 2 cut(s) 32, 288
BssSI CACGAG 1 cut(s) 395
BssT1I CCWWGG 2 cut(s) 85, 412
Bst2BI CACGAG 1 cut(s) 395
Bst2UI CCWGG 3 cut(s) 16, 55, 264
Bst4CI ACNGT 3 cut(s) 196, 250, 447
Bst6I CTCTTC 1 cut(s) 590
BstC8I GCNNGC 2 cut(s) 60, 542
BstDEI CTNAG 4 cut(s) 139, 219, 335, 344
BstDSI CCRYGG 1 cut(s) 571
BstF5I GGATG 3 cut(s) 355, 465, 640
BstFNI CGCG 2 cut(s) 365, 573
BstH2I RGCGCY 1 cut(s) 392
BstHHI GCGC 1 cut(s) 391
BstKTI GATC 2 cut(s) 35, 291
BstMBI GATC 2 cut(s) 32, 288
BstMCI CGRYCG 1 cut(s) 79
BstMWI GCNNNNNNNGC 5 cut(s) 59, 371, 430, 460, 550
BstNI CCWGG 3 cut(s) 16, 55, 264
BstNSI RCATGY 1 cut(s) 301
BstSFI CTRYAG 1 cut(s) 443
BstUI CGCG 2 cut(s) 365, 573
BstV1I GCAGC 3 cut(s) 378, 441, 493
BstV2I GAAGAC 1 cut(s) 39
BsuI GTATCC 1 cut(s) 309
BsuRI GGCC 7 cut(s) 90, 182, 200, 340, 362, 524, 553
BtgI CCRYGG 1 cut(s) 571
BtsCI GGATG 3 cut(s) 355, 465, 640
BtsIMutI CAGTG 1 cut(s) 201
Cac8I GCNNGC 2 cut(s) 60, 542
CaiI CAGNNNCTG 1 cut(s) 451
CfoI GCGC 1 cut(s) 391
Cfr10I RCCGGY 2 cut(s) 78, 580
Cfr13I GGNCC 4 cut(s) 120, 181, 246, 532
Cfr42I CCGCGG 1 cut(s) 574
Cfr9I CCCGGG 1 cut(s) 376
CseI GACGC 1 cut(s) 332
Csp6I GTAC 4 cut(s) 40, 82, 229, 576
CspAI ACCGGT 2 cut(s) 78, 580
CviAII CATG 3 cut(s) 274, 298, 526
CviQI GTAC 4 cut(s) 40, 82, 229, 576
DdeI CTNAG 4 cut(s) 139, 219, 335, 344
DpnI GATC 2 cut(s) 34, 290
DpnII GATC 2 cut(s) 32, 288
EaeI YGGCCR 3 cut(s) 198, 360, 522
Eam1104I CTCTTC 1 cut(s) 590
EarI CTCTTC 1 cut(s) 590
Eco130I CCWWGG 2 cut(s) 85, 412
Eco147I AGGCCT 1 cut(s) 340
Eco47I GGWCC 3 cut(s) 120, 246, 532
Eco57I CTGAAG 2 cut(s) 84, 326
Eco88I CYCGRG 2 cut(s) 206, 376
EcoO109I RGGNCCY 3 cut(s) 120, 181, 532
EcoRII CCWGG 3 cut(s) 14, 53, 262
EcoT14I CCWWGG 2 cut(s) 85, 412
ErhI CCWWGG 2 cut(s) 85, 412
FaeI CATG 3 cut(s) 277, 301, 529
FaiI YATR 8 cut(s) 253, 275, 299, 511, 513, 518, 527, 560
FaqI GGGAC 2 cut(s) 259, 545
FatI CATG 3 cut(s) 273, 297, 525
FblI GTMKAC 2 cut(s) 96, 294
Fnu4HI GCNGC 5 cut(s) 302, 363, 392, 455, 482
FokI GGATG 2 cut(s) 362, 472
Fsp4HI GCNGC 5 cut(s) 302, 363, 392, 455, 482
FspBI CTAG 1 cut(s) 86
GlaI GCGC 1 cut(s) 390
GluI GCNGC 5 cut(s) 302, 363, 392, 455, 482
HaeII RGCGCY 1 cut(s) 392
HaeIII GGCC 7 cut(s) 90, 182, 200, 340, 362, 524, 553
HapII CCGG 9 cut(s) 79, 91, 185, 320, 377, 436, 476, 581, 607
HgaI GACGC 1 cut(s) 332
HhaI GCGC 1 cut(s) 391
Hin1II CATG 3 cut(s) 277, 301, 529
Hin6I GCGC 1 cut(s) 389
HinP1I GCGC 1 cut(s) 389
HinfI GANTC 4 cut(s) 5, 155, 367, 400
HpaII CCGG 9 cut(s) 79, 91, 185, 320, 377, 436, 476, 581, 607
HphI GGTGA 2 cut(s) 465, 595
Hpy166II GTNNAC 5 cut(s) 70, 97, 231, 295, 578
Hpy188I TCNGA 3 cut(s) 10, 142, 160
Hpy188III TCNNGA 1 cut(s) 206
Hpy8I GTNNAC 5 cut(s) 70, 97, 231, 295, 578
Hpy99I CGWCG 3 cut(s) 40, 164, 260
HpyAV CCTTC 1 cut(s) 564
HpyCH4III ACNGT 3 cut(s) 196, 250, 447
HpyCH4V TGCA 2 cut(s) 394, 497
HpyF10VI GCNNNNNNNGC 5 cut(s) 59, 371, 430, 460, 550
HpyF3I CTNAG 4 cut(s) 139, 219, 335, 344
Hsp92II CATG 3 cut(s) 277, 301, 529
HspAI GCGC 1 cut(s) 389
KpnI GGTACC 1 cut(s) 85
KspI CCGCGG 1 cut(s) 574
Kzo9I GATC 2 cut(s) 32, 288
Lsp1109I GCAGC 3 cut(s) 378, 441, 493
LweI GCATC 2 cut(s) 450, 628
MaeI CTAG 1 cut(s) 86
MaeIII GTNAC 2 cut(s) 190, 471
MalI GATC 2 cut(s) 34, 290
MboI GATC 2 cut(s) 32, 288
MboII GAAGA 4 cut(s) 39, 295, 298, 607
MlsI TGGCCA 2 cut(s) 200, 524
MluCI AATT 1 cut(s) 101
MluNI TGGCCA 2 cut(s) 200, 524
MlyI GAGTC 1 cut(s) 164
MmeI TCCRAC 1 cut(s) 183
MnlI CCTC 9 cut(s) 133, 157, 172, 202, 219, 351, 591, 613, 616
Mox20I TGGCCA 2 cut(s) 200, 524
MscI TGGCCA 2 cut(s) 200, 524
MseI TTAA 1 cut(s) 643
MslI CAYNNNNRTG 1 cut(s) 278
Msp20I TGGCCA 2 cut(s) 200, 524
MspA1I CMGCKG 2 cut(s) 484, 573
MspI CCGG 9 cut(s) 79, 91, 185, 320, 377, 436, 476, 581, 607
Mva1269I GAATGC 2 cut(s) 213, 499
MvaI CCWGG 3 cut(s) 16, 55, 264
MvnI CGCG 2 cut(s) 365, 573
MwoI GCNNNNNNNGC 5 cut(s) 59, 371, 430, 460, 550
NciI CCSGG 7 cut(s) 92, 185, 377, 378, 436, 477, 607
NdeII GATC 2 cut(s) 32, 288
NlaIII CATG 3 cut(s) 277, 301, 529
NlaIV GGNNCC 6 cut(s) 83, 121, 183, 247, 440, 533
NmeAIII GCCGAG 1 cut(s) 249
NmuCI GTSAC 2 cut(s) 190, 471
NspI RCATGY 1 cut(s) 301
PceI AGGCCT 1 cut(s) 340
PcsI WCGNNNNNNNCGW 1 cut(s) 122
PctI GAATGC 2 cut(s) 213, 499
PfeI GAWTC 3 cut(s) 5, 367, 400
PinAI ACCGGT 2 cut(s) 78, 580
PkrI GCNGC 5 cut(s) 303, 364, 393, 456, 483
PleI GAGTC 1 cut(s) 163
PpsI GAGTC 1 cut(s) 163
PpuMI RGGWCCY 2 cut(s) 120, 532
Psp5II RGGWCCY 2 cut(s) 120, 532
Psp6I CCWGG 3 cut(s) 14, 53, 262
PspGI CCWGG 3 cut(s) 14, 53, 262
PspN4I GGNNCC 6 cut(s) 83, 121, 183, 247, 440, 533
PspPI GGNCC 4 cut(s) 120, 181, 246, 532
PspPPI RGGWCCY 2 cut(s) 120, 532
PstNI CAGNNNCTG 1 cut(s) 451
PvuII CAGCTG 1 cut(s) 484
RsaI GTAC 4 cut(s) 41, 83, 230, 577
RsaNI GTAC 4 cut(s) 40, 82, 229, 576
RseI CAYNNNNRTG 1 cut(s) 278
SacII CCGCGG 1 cut(s) 574
SaqAI TTAA 1 cut(s) 643
SatI GCNGC 5 cut(s) 302, 363, 392, 455, 482
Sau3AI GATC 2 cut(s) 32, 288
Sau96I GGNCC 4 cut(s) 120, 181, 246, 532
SchI GAGTC 1 cut(s) 164
SetI ASST 9 cut(s) 64, 87, 230, 265, 336, 408, 471, 486, 537
SfaNI GCATC 2 cut(s) 450, 628
SfcI CTRYAG 1 cut(s) 443
Sfr303I CCGCGG 1 cut(s) 574
SgrAI CRCCGGYG 1 cut(s) 580
SgrBI CCGCGG 1 cut(s) 574
SinI GGWCC 3 cut(s) 120, 246, 532
SmaI CCCGGG 1 cut(s) 378
SmiMI CAYNNNNRTG 1 cut(s) 278
Sse9I AATT 1 cut(s) 101
SseBI AGGCCT 1 cut(s) 340
SsiI CCGC 8 cut(s) 107, 176, 239, 301, 363, 457, 571, 573
SspMI CTAG 1 cut(s) 86
StuI AGGCCT 1 cut(s) 340
StyI CCWWGG 2 cut(s) 85, 412
TaaI ACNGT 3 cut(s) 196, 250, 447
TaqI TCGA 2 cut(s) 75, 125
TasI AATT 1 cut(s) 101
TauI GCSGC 2 cut(s) 304, 365
TfiI GAWTC 3 cut(s) 5, 367, 400
Tru1I TTAA 1 cut(s) 643
Tru9I TTAA 1 cut(s) 643
TscAI CASTG 1 cut(s) 201
TseFI GTSAC 2 cut(s) 190, 471
TseI GCWGC 3 cut(s) 391, 454, 481
Tsp45I GTSAC 2 cut(s) 190, 471
TspDTI ATGAA 1 cut(s) 296
TspMI CCCGGG 1 cut(s) 376
TspRI CASTG 1 cut(s) 201
VpaK11BI GGWCC 3 cut(s) 120, 246, 532
XceI RCATGY 1 cut(s) 301
XmaI CCCGGG 1 cut(s) 376
XmaJI CCTAGG 1 cut(s) 85
XmiI GTMKAC 2 cut(s) 96, 294
XspI CTAG 1 cut(s) 86
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.