Rroxscaffold_4G00296530

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000087
Physical Location & Seq
Forward (+)
16580835 .. 16582985
2151 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00296530.1

Sequence Viewer

Length: 915 bp
ATGAACGAGATCATCGTTATGAGATTGAAGTGGGGAATACCGGACGAGGTAGAGCTTAAGCCTCTCAAGGCCGGAGAGAAGGCTGCAAATCCTCCTCGGGATGGGTGGCTCGCACGAGAACCAGCTCCACCAAGGGCTATCGCCACACGCTGCCCGGTGCCTACGGTATCTCTTGCGGATGCTGAACCCGTCACGGGGGAAGTTGACGCCGAACGCCCGGCGACAAATGTTGAGAAACAATCTTGTCTAGTAAAAGTACCGAAGAGGAAACCCCGTAAAGGCAAGGAAGAGGACAAGATGAACGACAACGTGCTAATGGACATGCTCGTGAGGCGGGGAGAAGATGCCCCGCACATTGATGTCTATCTCTCATCGAAGGCTACGGGACCCTTGATTGATGAGATGCTCCTTGAGATCGATGACGATGTGTACTGCAAGTGTGACCATCCTCTTGCCGGGGAGATTGTCACTATTAATGATACGGGGAAGAGGAAAGACGCCGGTGTACGGCTCTATATCTTCTCTATCCGCCGGGTCGGCCGGGAGCGAGGAGGCTTTGCTGCTCGGCTAAATTTCGAGGCAAAGGATGAGGTGAAGAGTGCCGGGTCTCGAGAAAGAAGCCGCCGAATCGCCAAATCGTGGAAGGCGAGAGCAGATCATCCGGAGGAGCGCCTTCCCGTGGAGAGGCACGATGCCGTGGCGGAGTACAAGGGCTCCCAAGAGCTCATTGATATGCTGCTTGTTGCGCAAGACAAGGCTATGATTATGAAGTTCAAAGAGTGGGTGGCAGCCGAGTACCGGATGAAGCCAAGTTTAGGTGGGGACTTCTTGAGAAGAAGAAGAAGGAACAAGAGGCTGCAGCCAAATTGGGTGCCGGTGGATCCCGAGTGCCGCTCGGAATTACAATTTCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

304

Amino Acids

34.59

Weight (kDa)

8.97

Isoelectric Point (pI)

51.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 747
AccB1I GGYRCC 2 cut(s) 157, 871
AccB7I CCANNNNNTGG 1 cut(s) 639
AccBSI CCGCTC 1 cut(s) 894
AccIII TCCGGA 1 cut(s) 661
AciI CCGC 7 cut(s) 176, 334, 350, 529, 622, 701, 892
AclWI GGATC 2 cut(s) 875, 888
AcoI YGGCCR 1 cut(s) 538
AcsI RAATTY 1 cut(s) 571
AcyI GRCGYC 2 cut(s) 207, 498
AfaI GTAC 5 cut(s) 258, 431, 507, 707, 797
AflII CTTAAG 1 cut(s) 56
AgsI TTSAA 2 cut(s) 28, 775
AluBI AGCT 3 cut(s) 55, 125, 724
AluI AGCT 3 cut(s) 55, 125, 724
Alw21I GWGCWC 1 cut(s) 726
Alw26I GTCTC 1 cut(s) 612
AlwI GGATC 2 cut(s) 875, 888
Ama87I CYCGRG 3 cut(s) 96, 609, 884
Aor13HI TCCGGA 1 cut(s) 661
AoxI GGCC 2 cut(s) 69, 538
ApeKI GCWGC 7 cut(s) 83, 150, 560, 736, 788, 856, 859
ApoI RAATTY 1 cut(s) 571
AseI ATTAAT 1 cut(s) 474
AspLEI GCGC 2 cut(s) 672, 748
AspS9I GGNCC 1 cut(s) 386
AsuC2I CCSGG 6 cut(s) 155, 218, 457, 533, 542, 604
AsuHPI GGTGA 1 cut(s) 604
AvaI CYCGRG 3 cut(s) 96, 609, 884
AvaII GGWCC 1 cut(s) 386
BamHI GGATCC 1 cut(s) 880
BanI GGYRCC 2 cut(s) 157, 871
BanII GRGCYC 2 cut(s) 716, 726
BauI CACGAG 2 cut(s) 114, 326
Bbv12I GWGCWC 1 cut(s) 726
BbvI GCAGC 7 cut(s) 70, 137, 547, 723, 800, 843, 871
BccI CCATC 2 cut(s) 95, 453
BceAI ACGGC 2 cut(s) 524, 680
BcnI CCSGG 6 cut(s) 155, 218, 457, 533, 542, 604
BcoDI GTCTC 1 cut(s) 612
BfaI CTAG 1 cut(s) 248
BfmI CTRYAG 1 cut(s) 857
BfoI RGCGCY 1 cut(s) 673
BfrI CTTAAG 1 cut(s) 56
BglI GCCNNNNNGGC 1 cut(s) 537
BisI GCNGC 9 cut(s) 84, 151, 561, 622, 737, 789, 857, 860, 892
BlsI GCNGC 9 cut(s) 85, 152, 562, 623, 738, 790, 858, 861, 893
Bme1390I CCNGG 6 cut(s) 155, 218, 457, 533, 542, 604
Bme18I GGWCC 1 cut(s) 386
BmeT110I CYCGRG 3 cut(s) 96, 609, 884
BmgT120I GGNCC 1 cut(s) 386
BmiI GGNNCC 6 cut(s) 159, 387, 388, 715, 873, 882
BmrFI CCNGG 6 cut(s) 155, 218, 457, 533, 542, 604
BmsI GCATC 4 cut(s) 169, 334, 393, 682
BplI GAGNNNNNCTC 2 cut(s) 878, 910
BpuEI CTTGAG 3 cut(s) 50, 431, 850
BpuMI CCSGG 6 cut(s) 155, 218, 457, 533, 542, 604
Bsa29I ATCGAT 1 cut(s) 417
BsaBI GATNNNNATC 1 cut(s) 363
BsaHI GRCGYC 2 cut(s) 207, 498
BsaI GGTCTC 1 cut(s) 612
BsaJI CCNNGG 5 cut(s) 95, 131, 456, 678, 696
BsaWI WCCGGW 3 cut(s) 40, 661, 798
BsaXI ACNNNNNCTCC 2 cut(s) 698, 728
Bse118I RCCGGY 2 cut(s) 500, 874
Bse8I GATNNNNATC 1 cut(s) 363
BseAI TCCGGA 1 cut(s) 661
BseCI ATCGAT 1 cut(s) 417
BseDI CCNNGG 5 cut(s) 95, 131, 456, 678, 696
BseGI GGATG 6 cut(s) 106, 184, 445, 592, 658, 807
BseJI GATNNNNATC 1 cut(s) 363
BseRI GAGGAG 3 cut(s) 84, 564, 680
BseX3I CGGCCG 1 cut(s) 538
BseXI GCAGC 7 cut(s) 70, 137, 547, 723, 800, 843, 871
Bsh1285I CGRYCG 1 cut(s) 541
BshFI GGCC 2 cut(s) 71, 540
BshNI GGYRCC 2 cut(s) 157, 871
BshVI ATCGAT 1 cut(s) 417
BsiEI CGRYCG 1 cut(s) 541
BsiHKAI GWGCWC 1 cut(s) 726
BsiHKCI CYCGRG 3 cut(s) 96, 609, 884
BslFI GGGAC 2 cut(s) 399, 836
BsmAI GTCTC 1 cut(s) 612
BsmFI GGGAC 2 cut(s) 399, 836
BsnI GGCC 2 cut(s) 71, 540
Bso31I GGTCTC 1 cut(s) 612
BsoBI CYCGRG 3 cut(s) 96, 609, 884
Bsp1286I GDGCHC 2 cut(s) 716, 726
Bsp13I TCCGGA 1 cut(s) 661
Bsp143I GATC 4 cut(s) 9, 414, 655, 880
BspACI CCGC 7 cut(s) 176, 334, 350, 529, 622, 701, 892
BspANI GGCC 2 cut(s) 71, 540
BspDI ATCGAT 1 cut(s) 417
BspEI TCCGGA 1 cut(s) 661
BspLI GGNNCC 6 cut(s) 159, 387, 388, 715, 873, 882
BspMAI CTGCAG 1 cut(s) 861
BspPI GGATC 2 cut(s) 875, 888
BspT107I GGYRCC 2 cut(s) 157, 871
BspTI CTTAAG 1 cut(s) 56
BspTNI GGTCTC 1 cut(s) 612
BsrBI CCGCTC 1 cut(s) 894
BsrFI RCCGGY 2 cut(s) 500, 874
BssAI RCCGGY 2 cut(s) 500, 874
BssECI CCNNGG 5 cut(s) 95, 131, 456, 678, 696
BssMI GATC 4 cut(s) 9, 414, 655, 880
BssNI GRCGYC 2 cut(s) 207, 498
BssSI CACGAG 2 cut(s) 114, 326
BssT1I CCWWGG 1 cut(s) 131
Bst2BI CACGAG 2 cut(s) 114, 326
Bst4CI ACNGT 1 cut(s) 166
Bst6I CTCTTC 4 cut(s) 257, 282, 482, 590
BstACI GRCGYC 2 cut(s) 207, 498
BstAFI CTTAAG 1 cut(s) 56
BstC8I GCNNGC 1 cut(s) 111
BstDSI CCRYGG 2 cut(s) 678, 696
BstF5I GGATG 6 cut(s) 106, 184, 445, 592, 658, 807
BstH2I RGCGCY 1 cut(s) 673
BstHHI GCGC 2 cut(s) 672, 748
BstKTI GATC 4 cut(s) 12, 417, 658, 883
BstMAI GTCTC 1 cut(s) 612
BstMBI GATC 4 cut(s) 9, 414, 655, 880
BstMCI CGRYCG 1 cut(s) 541
BstMWI GCNNNNNNNGC 3 cut(s) 331, 537, 745
BstNSI RCATGY 1 cut(s) 325
BstSCI CCNGG 6 cut(s) 153, 216, 455, 531, 540, 602
BstSFI CTRYAG 1 cut(s) 857
BstV1I GCAGC 7 cut(s) 70, 137, 547, 723, 800, 843, 871
BstX2I RGATCY 1 cut(s) 880
BstYI RGATCY 1 cut(s) 880
BstZI CGGCCG 1 cut(s) 538
Bsu15I ATCGAT 1 cut(s) 417
BsuRI GGCC 2 cut(s) 71, 540
BsuTUI ATCGAT 1 cut(s) 417
BtgI CCRYGG 2 cut(s) 678, 696
BtsCI GGATG 6 cut(s) 106, 184, 445, 592, 658, 807
Cac8I GCNNGC 1 cut(s) 111
CfoI GCGC 2 cut(s) 672, 748
Cfr10I RCCGGY 2 cut(s) 500, 874
Cfr13I GGNCC 1 cut(s) 386
ClaI ATCGAT 1 cut(s) 417
CseI GACGC 2 cut(s) 215, 506
Csp6I GTAC 5 cut(s) 257, 430, 506, 706, 796
CviAII CATG 1 cut(s) 322
CviQI GTAC 5 cut(s) 257, 430, 506, 706, 796
DpnI GATC 4 cut(s) 11, 416, 657, 882
DpnII GATC 4 cut(s) 9, 414, 655, 880
EaeI YGGCCR 1 cut(s) 538
EagI CGGCCG 1 cut(s) 538
Eam1104I CTCTTC 4 cut(s) 257, 282, 482, 590
EarI CTCTTC 4 cut(s) 257, 282, 482, 590
EciI GGCGGA 2 cut(s) 518, 716
Ecl136II GAGCTC 1 cut(s) 724
EclXI CGGCCG 1 cut(s) 538
Eco130I CCWWGG 1 cut(s) 131
Eco24I GRGCYC 2 cut(s) 716, 726
Eco31I GGTCTC 1 cut(s) 612
Eco47I GGWCC 1 cut(s) 386
Eco52I CGGCCG 1 cut(s) 538
Eco53kI GAGCTC 1 cut(s) 724
Eco88I CYCGRG 3 cut(s) 96, 609, 884
EcoICRI GAGCTC 1 cut(s) 724
EcoO109I RGGNCCY 1 cut(s) 386
EcoT14I CCWWGG 1 cut(s) 131
EcoT38I GRGCYC 2 cut(s) 716, 726
ErhI CCWWGG 1 cut(s) 131
FaeI CATG 1 cut(s) 325
FaiI YATR 7 cut(s) 20, 323, 516, 734, 761, 767, 913
FaqI GGGAC 2 cut(s) 399, 836
FatI CATG 1 cut(s) 321
FauI CCCGC 2 cut(s) 327, 357
Fnu4HI GCNGC 9 cut(s) 84, 151, 561, 622, 737, 789, 857, 860, 892
FokI GGATG 6 cut(s) 113, 191, 432, 599, 645, 814
FriOI GRGCYC 2 cut(s) 716, 726
Fsp4HI GCNGC 9 cut(s) 84, 151, 561, 622, 737, 789, 857, 860, 892
FspBI CTAG 1 cut(s) 248
FspI TGCGCA 1 cut(s) 747
GlaI GCGC 2 cut(s) 671, 747
GluI GCNGC 9 cut(s) 84, 151, 561, 622, 737, 789, 857, 860, 892
HaeII RGCGCY 1 cut(s) 673
HaeIII GGCC 2 cut(s) 71, 540
HgaI GACGC 2 cut(s) 215, 506
HhaI GCGC 2 cut(s) 672, 748
Hin1I GRCGYC 2 cut(s) 207, 498
Hin1II CATG 1 cut(s) 325
Hin6I GCGC 2 cut(s) 670, 746
HinP1I GCGC 2 cut(s) 670, 746
HincII GTYRAC 1 cut(s) 205
HindII GTYRAC 1 cut(s) 205
HinfI GANTC 1 cut(s) 627
HphI GGTGA 1 cut(s) 604
Hpy166II GTNNAC 3 cut(s) 205, 430, 506
Hpy188I TCNGA 1 cut(s) 898
Hpy188III TCNNGA 7 cut(s) 98, 328, 609, 611, 662, 829, 884
Hpy8I GTNNAC 3 cut(s) 205, 430, 506
HpyAV CCTTC 5 cut(s) 73, 370, 637, 683, 837
HpyCH4III ACNGT 1 cut(s) 166
HpyCH4IV ACGT 1 cut(s) 309
HpyCH4V TGCA 3 cut(s) 86, 435, 859
HpyF10VI GCNNNNNNNGC 3 cut(s) 331, 537, 745
HpySE526I ACGT 1 cut(s) 309
Hsp92I GRCGYC 2 cut(s) 207, 498
Hsp92II CATG 1 cut(s) 325
HspAI GCGC 2 cut(s) 670, 746
KflI GGGWCCC 1 cut(s) 386
Kpn2I TCCGGA 1 cut(s) 661
Kzo9I GATC 4 cut(s) 9, 414, 655, 880
LmnI GCTCC 5 cut(s) 130, 411, 544, 667, 719
Lsp1109I GCAGC 7 cut(s) 70, 137, 547, 723, 800, 843, 871
LweI GCATC 4 cut(s) 169, 334, 393, 682
MaeI CTAG 1 cut(s) 248
MaeII ACGT 1 cut(s) 309
MaeIII GTNAC 3 cut(s) 190, 440, 466
MalI GATC 4 cut(s) 11, 416, 657, 882
MbiI CCGCTC 1 cut(s) 894
MboI GATC 4 cut(s) 9, 414, 655, 880
MboII GAAGA 9 cut(s) 274, 299, 353, 499, 511, 607, 846, 849, 852
MflI RGATCY 1 cut(s) 880
MhlI GDGCHC 2 cut(s) 716, 726
MluCI AATT 4 cut(s) 571, 865, 899, 905
MroI TCCGGA 1 cut(s) 661
MseI TTAA 2 cut(s) 57, 474
MslI CAYNNNNRTG 4 cut(s) 17, 326, 357, 731
MspCI CTTAAG 1 cut(s) 56
MspR9I CCNGG 6 cut(s) 155, 218, 457, 533, 542, 604
MwoI GCNNNNNNNGC 3 cut(s) 331, 537, 745
NciI CCSGG 6 cut(s) 155, 218, 457, 533, 542, 604
NdeII GATC 4 cut(s) 9, 414, 655, 880
NlaIII CATG 1 cut(s) 325
NlaIV GGNNCC 6 cut(s) 159, 387, 388, 715, 873, 882
NmeAIII GCCGAG 2 cut(s) 544, 817
NmuCI GTSAC 3 cut(s) 190, 440, 466
NsbI TGCGCA 1 cut(s) 747
NspI RCATGY 1 cut(s) 325
PaeR7I CTCGAG 1 cut(s) 609
PcsI WCGNNNNNNNCGW 2 cut(s) 12, 644
PfeI GAWTC 1 cut(s) 627
PflMI CCANNNNNTGG 1 cut(s) 639
PkrI GCNGC 9 cut(s) 85, 152, 562, 623, 738, 790, 858, 861, 893
PpuMI RGGWCCY 1 cut(s) 386
PshBI ATTAAT 1 cut(s) 474
Psp124BI GAGCTC 1 cut(s) 726
Psp5II RGGWCCY 1 cut(s) 386
PspN4I GGNNCC 6 cut(s) 159, 387, 388, 715, 873, 882
PspPI GGNCC 1 cut(s) 386
PspPPI RGGWCCY 1 cut(s) 386
PstI CTGCAG 1 cut(s) 861
PsuI RGATCY 1 cut(s) 880
RsaI GTAC 5 cut(s) 258, 431, 507, 707, 797
RsaNI GTAC 5 cut(s) 257, 430, 506, 706, 796
RseI CAYNNNNRTG 4 cut(s) 17, 326, 357, 731
SacI GAGCTC 1 cut(s) 726
SaqAI TTAA 2 cut(s) 57, 474
SatI GCNGC 9 cut(s) 84, 151, 561, 622, 737, 789, 857, 860, 892
Sau3AI GATC 4 cut(s) 9, 414, 655, 880
Sau96I GGNCC 1 cut(s) 386
ScrFI CCNGG 6 cut(s) 155, 218, 457, 533, 542, 604
SduI GDGCHC 2 cut(s) 716, 726
SetI ASST 7 cut(s) 51, 57, 127, 312, 594, 726, 820
SfaNI GCATC 4 cut(s) 169, 334, 393, 682
SfcI CTRYAG 1 cut(s) 857
Sfr274I CTCGAG 1 cut(s) 609
SgrAI CRCCGGYG 1 cut(s) 500
SinI GGWCC 1 cut(s) 386
SlaI CTCGAG 1 cut(s) 609
SmiMI CAYNNNNRTG 4 cut(s) 17, 326, 357, 731
SmlI CTYRAG 5 cut(s) 56, 65, 410, 609, 829
SmoI CTYRAG 5 cut(s) 56, 65, 410, 609, 829
Sse9I AATT 4 cut(s) 571, 865, 899, 905
SsiI CCGC 7 cut(s) 176, 334, 350, 529, 622, 701, 892
SspMI CTAG 1 cut(s) 248
SstI GAGCTC 1 cut(s) 726
StyD4I CCNGG 6 cut(s) 153, 216, 455, 531, 540, 602
StyI CCWWGG 1 cut(s) 131
TaaI ACNGT 1 cut(s) 166
TaiI ACGT 1 cut(s) 312
TaqI TCGA 4 cut(s) 374, 417, 576, 610
TasI AATT 4 cut(s) 571, 865, 899, 905
TatI WGTACW 2 cut(s) 429, 705
TauI GCSGC 2 cut(s) 624, 894
TfiI GAWTC 1 cut(s) 627
Tru1I TTAA 2 cut(s) 57, 474
Tru9I TTAA 2 cut(s) 57, 474
TseFI GTSAC 3 cut(s) 190, 440, 466
TseI GCWGC 7 cut(s) 83, 150, 560, 736, 788, 856, 859
Tsp45I GTSAC 3 cut(s) 190, 440, 466
TspDTI ATGAA 4 cut(s) 17, 314, 782, 818
Van91I CCANNNNNTGG 1 cut(s) 639
Vha464I CTTAAG 1 cut(s) 56
VpaK11BI GGWCC 1 cut(s) 386
VspI ATTAAT 1 cut(s) 474
XapI RAATTY 1 cut(s) 571
XceI RCATGY 1 cut(s) 325
XhoI CTCGAG 1 cut(s) 609
XspI CTAG 1 cut(s) 248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.