Rmu_sc0002690.1_g000010

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002690.1
OG0000087
Physical Location & Seq
Reverse (-)
46540 .. 50368
3829 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002690.1_g000010.1.cds

Sequence Viewer

Length: 2046 bp
atgctataccgcctggggcaccgatcggctcctaaatcctgtagcagtcttgtatttgtaaagatagatgggctgtgctggcctttccccgggccctgggtgcccggggtggcatcttatgtgaagcctgccatggtggggtgtgaaccgggcacatggcgtagtacatgggagtaccgatggggctcaggggctagtgctaaacctagtaaaccgctttcatgggacaatgaggttgtccctgagactggatgggatggagaatttgagcctccgagagagcttggcttcgatacccgatggggtagaagatttgagcctccggtacccaatggggtagagagagcttggcttcgatacccgatgggtataaaattggagcctccggtacccaatggggcgttatatgtcggccacgtgggcagactaggtcgtgcaataaatgcccgtcccttcttctgccgaggcttcgagaaatgggagaacgcgtgggacacgtgtagcgatcctacggcagaggtcgtttcgaagctcgagagatttggaaggtttgcagcaaagagaaagggagaaccaagggagaattgtgagtgcctgtggagtgagatcaatcgtctgccaaggaaaaggttagatctctctctgcctgtggattttacctattctcttgctaggtctgcttctgttactaccaaggcagttttctatatagcaagatttgaggtccccggtacagtagttaggatggaatcagaagccaggggtggggatactggatcgtcttaccagtcctctgctaggcgagctgaaatgaacatcgaccggtacctaggctgggtagaccaattagcggagaacacggggtcctcaactggggtgttctcggagagtagtggggagtcagacgagggtgagagcgagggtggatctgcggaggccccggtagttacagtggccattcccgagggcattccgaagccgaggtacacacttgcggacgggaccggatggggagatggccgcaaatcctgccccggggtgggtggcgctgcacgagaatcagctccaccaagggttatcgttacccctgccccggtgcctacaccctccatggccgatgtcattacgatagctgaccccggggttggaaaagtaccggccccagtacctatttcgtctcgttccactgggagcgatgaggtgttactccccggtgagaagaagagatcccacaagcaccggcatcgaaccgataaggagggtactggtgcgaagaggcagaagaaagatcacccgggatcaaggtcgtcgccttcccttggcatgttatctcccgccgttctggtaatccccaagaagcccatcaagcagctgctgaatgaatacggggttgccgatgaaaagttcgtgcggtccatgcttggggatctgaaggacattgacctcgaccgggttcgagccaaagataatactccccaggagaatcgccgtctcgcccgggaatcaatgatgcgggccctcttcaatgtgtacgccatcgacgccagcgaggaagatactcatctgaaggaggaggttagcaacctctccgggcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggactcgttgagggctgagatggccgcctctaagcagcggattgcggagcttgagggtgaggtttctgaggcgcgggaggaggtaaagaacgcccgggactccgagaaaaaggctgcagagtctgccgtctcatggaaggagaaagcagactctctggaggatcgccttcccgcggagaggcacgaggccgtggaggagtacaagtcctcggatgagcttatctctatgctggctgctgcccaagataaggctgtcatcatgaagtttaaggagtgggtggcggccgggtacttagatgaagccaaatttaggcggggtctcctggagaaaaggaagatggagcgggaggcggcggccaagtccggtaccggtgggactcagagtaccgatggagatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

681

Amino Acids

75.12

Weight (kDa)

7.95

Isoelectric Point (pI)

43.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1585
Acc36I ACCTGC 1 cut(s) 1585
Acc65I GGTACC 4 cut(s) 325, 388, 825, 2006
AccB1I GGYRCC 7 cut(s) 18, 100, 325, 388, 825, 1096, 2006
AccBSI CCGCTC 2 cut(s) 1639, 1984
AccI GTMKAC 1 cut(s) 840
AccII CGCG 3 cut(s) 488, 1714, 1814
AclWI GGATC 7 cut(s) 500, 784, 934, 1221, 1306, 1434, 1809
AcoI YGGCCR 7 cut(s) 412, 954, 1018, 1113, 1662, 1923, 1995
AcsI RAATTY 2 cut(s) 263, 1946
AcuI CTGAAG 2 cut(s) 1451, 1586
AcvI CACGTG 2 cut(s) 418, 498
AcyI GRCGYC 1 cut(s) 1542
AflIII ACRYGT 3 cut(s) 486, 495, 497
AgeI ACCGGT 2 cut(s) 822, 2009
AgsI TTSAA 1 cut(s) 1525
AjnI CCWGG 5 cut(s) 12, 95, 758, 1476, 1962
AjuI GAANNNNNNNTTGG 2 cut(s) 686, 718
AloI GAACNNNNNNTCC 2 cut(s) 848, 880
Alw26I GTCTC 5 cut(s) 239, 1182, 1496, 1774, 1964
AlwI GGATC 7 cut(s) 500, 784, 934, 1221, 1306, 1434, 1809
AlwNI CAGNNNCTG 2 cut(s) 1375, 1763
Ama87I CYCGRG 9 cut(s) 89, 104, 533, 962, 1034, 1139, 1294, 1497, 1734
ApaI GGGCCC 2 cut(s) 96, 1519
ApeKI GCWGC 8 cut(s) 554, 1049, 1369, 1372, 1675, 1754, 1874, 1877
ApoI RAATTY 2 cut(s) 263, 1946
AsiGI ACCGGT 2 cut(s) 822, 2009
Asp718I GGTACC 4 cut(s) 325, 388, 825, 2006
AspA2I CCTAGG 1 cut(s) 829
AspLEI GCGC 2 cut(s) 1049, 1714
AsuHPI GGTGA 5 cut(s) 923, 1226, 1283, 1609, 1709
AsuII TTCGAA 1 cut(s) 527
AvaI CYCGRG 9 cut(s) 89, 104, 533, 962, 1034, 1139, 1294, 1497, 1734
AvaII GGWCC 4 cut(s) 724, 864, 1002, 1413
AvrII CCTAGG 1 cut(s) 829
BaeGI GKGCMC 5 cut(s) 21, 96, 105, 155, 1519
BaeI ACNNNNGTAYC 2 cut(s) 723, 756
BalI TGGCCA 1 cut(s) 956
BanI GGYRCC 7 cut(s) 18, 100, 325, 388, 825, 1096, 2006
BanII GRGCYC 3 cut(s) 96, 188, 1519
BarI GAAGNNNNNNTAC 2 cut(s) 968, 1000
BauI CACGAG 2 cut(s) 1053, 1823
BbrPI CACGTG 2 cut(s) 418, 498
BbvI GCAGC 8 cut(s) 566, 1036, 1359, 1381, 1687, 1741, 1861, 1864
BceAI ACGGC 5 cut(s) 528, 1322, 1473, 1751, 1814
BcgI CGANNNNNNTGC 2 cut(s) 1226, 1260
BciT130I CCWGG 5 cut(s) 14, 97, 760, 1478, 1964
BciVI GTATCC 1 cut(s) 763
BcoDI GTCTC 5 cut(s) 239, 1182, 1496, 1774, 1964
BfaI CTAG 6 cut(s) 195, 207, 428, 672, 798, 830
BfmI CTRYAG 2 cut(s) 40, 1755
BfoI RGCGCY 1 cut(s) 1050
BfuAI ACCTGC 1 cut(s) 1585
BfuI GTATCC 1 cut(s) 763
BglI GCCNNNNNGGC 1 cut(s) 420
BglII AGATCT 1 cut(s) 634
BlnI CCTAGG 1 cut(s) 829
Bme18I GGWCC 4 cut(s) 724, 864, 1002, 1413
BmeT110I CYCGRG 9 cut(s) 89, 104, 533, 962, 1034, 1139, 1294, 1497, 1734
BmrI ACTGGG 3 cut(s) 882, 1157, 1197
BmsI GCATC 3 cut(s) 122, 1252, 1500
BmuI ACTGGG 3 cut(s) 882, 1157, 1197
BplI GAGNNNNNCTC 4 cut(s) 1628, 1660, 1847, 1879
BpmI CTGGAG 3 cut(s) 1649, 1817, 1985
Bpu10I CCTNAGC 1 cut(s) 187
Bpu14I TTCGAA 1 cut(s) 527
BpuEI CTTGAG 1 cut(s) 1712
BsaAI YACGTR 2 cut(s) 418, 498
BsaBI GATNNNNATC 2 cut(s) 1560, 2034
BsaHI GRCGYC 1 cut(s) 1542
BsaI GGTCTC 1 cut(s) 1964
BsaWI WCCGGW 6 cut(s) 322, 385, 822, 1004, 2003, 2009
BsaXI ACNNNNNCTCC 4 cut(s) 473, 503, 1829, 1859
Bse118I RCCGGY 4 cut(s) 822, 1156, 1239, 2009
Bse1I ACTGG 7 cut(s) 253, 778, 787, 877, 1163, 1192, 1270
Bse8I GATNNNNATC 2 cut(s) 1560, 2034
BseBI CCWGG 5 cut(s) 14, 97, 760, 1478, 1964
BseGI GGATG 5 cut(s) 257, 262, 750, 1013, 1858
BseJI GATNNNNATC 2 cut(s) 1560, 2034
BseMII CTCAG 5 cut(s) 201, 234, 1647, 1698, 2033
BseNI ACTGG 7 cut(s) 253, 778, 787, 877, 1163, 1192, 1270
BseRI GAGGAG 3 cut(s) 1586, 1733, 1850
BseSI GKGCMC 5 cut(s) 21, 96, 105, 155, 1519
BseX3I CGGCCG 1 cut(s) 1923
BseXI GCAGC 8 cut(s) 566, 1036, 1359, 1381, 1687, 1741, 1861, 1864
BseYI CCCAGC 1 cut(s) 834
BsgI GTGCAG 1 cut(s) 1035
Bsh1236I CGCG 3 cut(s) 488, 1714, 1814
Bsh1285I CGRYCG 4 cut(s) 26, 823, 1450, 1926
BshNI GGYRCC 7 cut(s) 18, 100, 325, 388, 825, 1096, 2006
BshTI ACCGGT 2 cut(s) 822, 2009
BsiEI CGRYCG 4 cut(s) 26, 823, 1450, 1926
BsiHKCI CYCGRG 9 cut(s) 89, 104, 533, 962, 1034, 1139, 1294, 1497, 1734
BslFI GGGAC 9 cut(s) 224, 239, 435, 506, 710, 1015, 1655, 1751, 2029
BsmAI GTCTC 5 cut(s) 239, 1182, 1496, 1774, 1964
BsmBI CGTCTC 3 cut(s) 1182, 1496, 1774
BsmFI GGGAC 9 cut(s) 224, 239, 435, 506, 710, 1015, 1655, 1751, 2029
BsmI GAATGC 1 cut(s) 969
Bso31I GGTCTC 1 cut(s) 1964
BsoBI CYCGRG 9 cut(s) 89, 104, 533, 962, 1034, 1139, 1294, 1497, 1734
Bsp119I TTCGAA 1 cut(s) 527
Bsp120I GGGCCC 2 cut(s) 92, 1515
Bsp1286I GDGCHC 6 cut(s) 21, 96, 105, 155, 188, 1519
Bsp19I CCATGG 2 cut(s) 132, 1110
BspCNI CTCAG 5 cut(s) 200, 235, 1648, 1699, 2032
BspFNI CGCG 3 cut(s) 488, 1714, 1814
BspHI TCATGA 1 cut(s) 1899
BspMAI CTGCAG 1 cut(s) 1759
BspMI ACCTGC 1 cut(s) 1585
BspPI GGATC 7 cut(s) 500, 784, 934, 1221, 1306, 1434, 1809
BspT104I TTCGAA 1 cut(s) 527
BspT107I GGYRCC 7 cut(s) 18, 100, 325, 388, 825, 1096, 2006
BspTNI GGTCTC 1 cut(s) 1964
BsrBI CCGCTC 2 cut(s) 1639, 1984
BsrFI RCCGGY 4 cut(s) 822, 1156, 1239, 2009
BsrI ACTGG 7 cut(s) 253, 778, 787, 877, 1163, 1192, 1270
BssAI RCCGGY 4 cut(s) 822, 1156, 1239, 2009
BssNI GRCGYC 1 cut(s) 1542
BssSI CACGAG 2 cut(s) 1053, 1823
BssT1I CCWWGG 8 cut(s) 132, 575, 620, 693, 829, 1070, 1110, 1318
Bst2BI CACGAG 2 cut(s) 1053, 1823
Bst2UI CCWGG 5 cut(s) 14, 97, 760, 1478, 1964
Bst4CI ACNGT 2 cut(s) 736, 952
Bst6I CTCTTC 3 cut(s) 1217, 1268, 1526
BstACI GRCGYC 1 cut(s) 1542
BstAPI GCANNNNNTGC 3 cut(s) 443, 1029, 1763
BstBAI YACGTR 2 cut(s) 418, 498
BstBI TTCGAA 1 cut(s) 527
BstC8I GCNNGC 6 cut(s) 80, 129, 804, 1515, 1546, 1872
BstDEI CTNAG 7 cut(s) 187, 243, 1656, 1671, 1707, 1933, 2019
BstDSI CCRYGG 4 cut(s) 132, 1110, 1812, 1830
BstENI CCTNNNNNAGG 1 cut(s) 796
BstF5I GGATG 5 cut(s) 257, 262, 750, 1013, 1858
BstFNI CGCG 3 cut(s) 488, 1714, 1814
BstH2I RGCGCY 1 cut(s) 1050
BstHHI GCGC 2 cut(s) 1049, 1714
BstMAI GTCTC 5 cut(s) 239, 1182, 1496, 1774, 1964
BstMCI CGRYCG 4 cut(s) 26, 823, 1450, 1926
BstNI CCWGG 5 cut(s) 14, 97, 760, 1478, 1964
BstNSI RCATGY 1 cut(s) 1327
BstSFI CTRYAG 2 cut(s) 40, 1755
BstSLI GKGCMC 5 cut(s) 21, 96, 105, 155, 1519
BstUI CGCG 3 cut(s) 488, 1714, 1814
BstV1I GCAGC 8 cut(s) 566, 1036, 1359, 1381, 1687, 1741, 1861, 1864
BstX2I RGATCY 4 cut(s) 634, 926, 1226, 1426
BstYI RGATCY 4 cut(s) 634, 926, 1226, 1426
BstZI CGGCCG 1 cut(s) 1923
BsuI GTATCC 1 cut(s) 763
BtgI CCRYGG 4 cut(s) 132, 1110, 1812, 1830
BtgZI GCGATG 1 cut(s) 1209
BtsCI GGATG 5 cut(s) 257, 262, 750, 1013, 1858
BtsIMutI CAGTG 2 cut(s) 957, 1185
BveI ACCTGC 1 cut(s) 1585
Cac8I GCNNGC 6 cut(s) 80, 129, 804, 1515, 1546, 1872
CaiI CAGNNNCTG 2 cut(s) 1375, 1763
CciI TCATGA 1 cut(s) 1899
CfoI GCGC 2 cut(s) 1049, 1714
Cfr10I RCCGGY 4 cut(s) 822, 1156, 1239, 2009
Cfr42I CCGCGG 1 cut(s) 1815
Cfr9I CCCGGG 7 cut(s) 89, 104, 1034, 1139, 1294, 1497, 1734
CseI GACGC 1 cut(s) 1550
CspAI ACCGGT 2 cut(s) 822, 2009
DdeI CTNAG 7 cut(s) 187, 243, 1656, 1671, 1707, 1933, 2019
EaeI YGGCCR 7 cut(s) 412, 954, 1018, 1113, 1662, 1923, 1995
EagI CGGCCG 1 cut(s) 1923
Eam1104I CTCTTC 3 cut(s) 1217, 1268, 1526
EarI CTCTTC 3 cut(s) 1217, 1268, 1526
EclXI CGGCCG 1 cut(s) 1923
Eco130I CCWWGG 8 cut(s) 132, 575, 620, 693, 829, 1070, 1110, 1318
Eco24I GRGCYC 3 cut(s) 96, 188, 1519
Eco31I GGTCTC 1 cut(s) 1964
Eco47I GGWCC 4 cut(s) 724, 864, 1002, 1413
Eco52I CGGCCG 1 cut(s) 1923
Eco57I CTGAAG 2 cut(s) 1451, 1586
Eco72I CACGTG 2 cut(s) 418, 498
Eco88I CYCGRG 9 cut(s) 89, 104, 533, 962, 1034, 1139, 1294, 1497, 1734
EcoNI CCTNNNNNAGG 1 cut(s) 796
EcoO109I RGGNCCY 5 cut(s) 93, 724, 864, 937, 1516
EcoRII CCWGG 5 cut(s) 12, 95, 758, 1476, 1962
EcoT14I CCWWGG 8 cut(s) 132, 575, 620, 693, 829, 1070, 1110, 1318
EcoT38I GRGCYC 3 cut(s) 96, 188, 1519
ErhI CCWWGG 8 cut(s) 132, 575, 620, 693, 829, 1070, 1110, 1318
Esp3I CGTCTC 3 cut(s) 1182, 1496, 1774
FaqI GGGAC 9 cut(s) 224, 239, 435, 506, 710, 1015, 1655, 1751, 2029
FauI CCCGC 7 cut(s) 1342, 1506, 1632, 1707, 1819, 1947, 1977
FblI GTMKAC 1 cut(s) 840
FokI GGATG 5 cut(s) 264, 269, 757, 1020, 1865
FriOI GRGCYC 3 cut(s) 96, 188, 1519
FspBI CTAG 6 cut(s) 195, 207, 428, 672, 798, 830
GlaI GCGC 2 cut(s) 1048, 1713
GsaI CCCAGC 1 cut(s) 838
GsuI CTGGAG 3 cut(s) 1649, 1817, 1985
HaeII RGCGCY 1 cut(s) 1050
HgaI GACGC 1 cut(s) 1550
HhaI GCGC 2 cut(s) 1049, 1714
Hin1I GRCGYC 1 cut(s) 1542
Hin6I GCGC 2 cut(s) 1047, 1712
HinP1I GCGC 2 cut(s) 1047, 1712
HphI GGTGA 5 cut(s) 923, 1226, 1283, 1609, 1709
Hpy166II GTNNAC 5 cut(s) 146, 212, 841, 987, 1531
Hpy188III TCNNGA 5 cut(s) 472, 535, 962, 1796, 1900
Hpy8I GTNNAC 5 cut(s) 146, 212, 841, 987, 1531
Hpy99I CGWCG 2 cut(s) 1312, 1544
HpyAV CCTTC 9 cut(s) 463, 540, 1323, 1426, 1561, 1612, 1627, 1771, 1817
HpyCH4III ACNGT 2 cut(s) 736, 952
HpyCH4IV ACGT 2 cut(s) 417, 497
HpyCH4V TGCA 4 cut(s) 437, 554, 1052, 1757
HpyF3I CTNAG 7 cut(s) 187, 243, 1656, 1671, 1707, 1933, 2019
HpySE526I ACGT 2 cut(s) 417, 497
Hsp92I GRCGYC 1 cut(s) 1542
HspAI GCGC 2 cut(s) 1047, 1712
KpnI GGTACC 4 cut(s) 329, 392, 829, 2010
KspI CCGCGG 1 cut(s) 1815
LmnI GCTCC 7 cut(s) 34, 379, 1069, 1191, 1636, 1687, 1981
Lsp1109I GCAGC 8 cut(s) 566, 1036, 1359, 1381, 1687, 1741, 1861, 1864
LweI GCATC 3 cut(s) 122, 1252, 1500
MaeI CTAG 6 cut(s) 195, 207, 428, 672, 798, 830
MaeII ACGT 2 cut(s) 417, 497
MaeIII GTNAC 4 cut(s) 685, 946, 1081, 1203
MbiI CCGCTC 2 cut(s) 1639, 1984
MflI RGATCY 4 cut(s) 634, 926, 1226, 1426
MhlI GDGCHC 6 cut(s) 21, 96, 105, 155, 188, 1519
MlsI TGGCCA 1 cut(s) 956
MluCI AATT 5 cut(s) 263, 374, 583, 845, 1946
MluI ACGCGT 1 cut(s) 486
MluNI TGGCCA 1 cut(s) 956
MlyI GAGTC 6 cut(s) 908, 1637, 1733, 1769, 1784, 2011
MmeI TCCRAC 1 cut(s) 1126
Mox20I TGGCCA 1 cut(s) 956
MscI TGGCCA 1 cut(s) 956
MseI TTAA 1 cut(s) 1908
Msp20I TGGCCA 1 cut(s) 956
MspA1I CMGCKG 3 cut(s) 1372, 1678, 1814
Mva1269I GAATGC 1 cut(s) 969
MvaI CCWGG 5 cut(s) 14, 97, 760, 1478, 1964
MvnI CGCG 3 cut(s) 488, 1714, 1814
NcoI CCATGG 2 cut(s) 132, 1110
NmeAIII GCCGAG 2 cut(s) 488, 1005
NspI RCATGY 1 cut(s) 1327
NspV TTCGAA 1 cut(s) 527
PaeR7I CTCGAG 1 cut(s) 533
PagI TCATGA 1 cut(s) 1899
PaqCI CACCTGC 1 cut(s) 1585
PasI CCCWGGG 1 cut(s) 96
PcsI WCGNNNNNNNCGW 2 cut(s) 1392, 1545
PctI GAATGC 1 cut(s) 969
PfeI GAWTC 4 cut(s) 749, 1058, 1483, 1502
PflFI GACNNNGTC 1 cut(s) 429
PfoI TCCNGGA 1 cut(s) 1962
PinAI ACCGGT 2 cut(s) 822, 2009
Ple19I CGATCG 1 cut(s) 26
PleI GAGTC 6 cut(s) 907, 1637, 1733, 1768, 1784, 2011
PmaCI CACGTG 2 cut(s) 418, 498
PmlI CACGTG 2 cut(s) 418, 498
PpsI GAGTC 6 cut(s) 907, 1637, 1733, 1768, 1784, 2011
Ppu21I YACGTR 2 cut(s) 418, 498
PpuMI RGGWCCY 2 cut(s) 724, 864
Psp5II RGGWCCY 2 cut(s) 724, 864
Psp6I CCWGG 5 cut(s) 12, 95, 758, 1476, 1962
PspCI CACGTG 2 cut(s) 418, 498
PspFI CCCAGC 1 cut(s) 834
PspGI CCWGG 5 cut(s) 12, 95, 758, 1476, 1962
PspOMI GGGCCC 2 cut(s) 92, 1515
PspPPI RGGWCCY 2 cut(s) 724, 864
PstI CTGCAG 1 cut(s) 1759
PstNI CAGNNNCTG 2 cut(s) 1375, 1763
PsuI RGATCY 4 cut(s) 634, 926, 1226, 1426
PsyI GACNNNGTC 1 cut(s) 429
PvuI CGATCG 1 cut(s) 26
PvuII CAGCTG 1 cut(s) 1372
SacII CCGCGG 1 cut(s) 1815
SaqAI TTAA 1 cut(s) 1908
SchI GAGTC 6 cut(s) 908, 1637, 1733, 1769, 1784, 2011
SduI GDGCHC 6 cut(s) 21, 96, 105, 155, 188, 1519
SfaNI GCATC 3 cut(s) 122, 1252, 1500
SfcI CTRYAG 2 cut(s) 40, 1755
Sfr274I CTCGAG 1 cut(s) 533
Sfr303I CCGCGG 1 cut(s) 1815
SfuI TTCGAA 1 cut(s) 527
SgrBI CCGCGG 1 cut(s) 1815
SinI GGWCC 4 cut(s) 724, 864, 1002, 1413
SlaI CTCGAG 1 cut(s) 533
SmaI CCCGGG 7 cut(s) 91, 106, 1036, 1141, 1296, 1499, 1736
SmlI CTYRAG 2 cut(s) 533, 1691
SmoI CTYRAG 2 cut(s) 533, 1691
Sse9I AATT 5 cut(s) 263, 374, 583, 845, 1946
SspMI CTAG 6 cut(s) 195, 207, 428, 672, 798, 830
StyI CCWWGG 8 cut(s) 132, 575, 620, 693, 829, 1070, 1110, 1318
TaaI ACNGT 2 cut(s) 736, 952
TaiI ACGT 2 cut(s) 420, 500
TasI AATT 5 cut(s) 263, 374, 583, 845, 1946
TatI WGTACW 2 cut(s) 164, 1839
TauI GCSGC 5 cut(s) 1023, 1667, 1925, 1994, 1997
TfiI GAWTC 4 cut(s) 749, 1058, 1483, 1502
Tru1I TTAA 1 cut(s) 1908
Tru9I TTAA 1 cut(s) 1908
TscAI CASTG 2 cut(s) 957, 1192
TseI GCWGC 8 cut(s) 554, 1049, 1369, 1372, 1675, 1754, 1874, 1877
TspDTI ATGAA 7 cut(s) 210, 827, 1395, 1413, 1598, 1916, 1953
TspMI CCCGGG 7 cut(s) 89, 104, 1034, 1139, 1294, 1497, 1734
TspRI CASTG 2 cut(s) 957, 1192
Tth111I GACNNNGTC 1 cut(s) 429
VpaK11BI GGWCC 4 cut(s) 724, 864, 1002, 1413
XagI CCTNNNNNAGG 1 cut(s) 796
XapI RAATTY 2 cut(s) 263, 1946
XceI RCATGY 1 cut(s) 1327
XhoI CTCGAG 1 cut(s) 533
XmaI CCCGGG 7 cut(s) 89, 104, 1034, 1139, 1294, 1497, 1734
XmaJI CCTAGG 1 cut(s) 829
XmiI GTMKAC 1 cut(s) 840
XspI CTAG 6 cut(s) 195, 207, 428, 672, 798, 830
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.